mRNA_H-paniculata_contig12340.1480.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12340.1480.1 vs. uniprot
Match: D7FSH0_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH0_ECTSI) HSP 1 Score: 452 bits (1164), Expect = 4.580e-150 Identity = 265/416 (63.70%), Postives = 296/416 (71.15%), Query Frame = 1 Query: 1 QALVRRRVMRLRALVLLPSRDLAMQVHAVFQRYANGTGLKVGLAIGQTNFLEEQLSLVGAAALAGNPVATARASFLRGQGHHTGRDPGKEFGVDLEGGR-----VPAGGASEVDIVVATPGRLLDHLEQTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVMKAAYRREPGCAAPILK------------VTTKHTAEND----------------------------------------RNHYRHLPTAVRLEPVTVRGRPLATGEHVRGATVATPPLRKLLFSATLTSNPQKLAGLDVVNPIVYTARSIGQTLSGSSIRPRRGEDGVVRRPSQKTRRLDLDTVGAGAGGGTGGRFSTPATLEEMYTVCDSQAKPLVLLSLLREATGRKKQLAVVFTSSVDSTHRLFRLLQLFGG 1077 QAL+RRRV+RLRALVLLPSRDLAMQVH+VF++YA GTGL+VGLAIGQTNFLEEQL+LVG ALAGNP ATARASFLR QG +P G +L+ G PAGG+SEVDIVVATPGRLLDHL QTPGFTLQHLRYL+IDEADRLLNQSYQGWV KV+KAAYR+EPG AAP+ + V+ AE+D R R P+A L+PVTVRGRPLATGE +RGATV+TPPLRKLLFSATLT+NPQKLAGLDVVNP++YTA T +G R G DG R PSQ+TRR +LD +G GG GRFSTPATLEE YTVCDSQAKPLVLLSLLRE GR+ L+VVFTSSVDSTHRLFRLLQLFGG Sbjct: 244 QALIRRRVVRLRALVLLPSRDLAMQVHSVFKKYARGTGLRVGLAIGQTNFLEEQLALVGPVALAGNPTATARASFLRAQGRAIRPNP-TMGGSNLDSGGWSGTGAPAGGSSEVDIVVATPGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIKAAYRKEPGTAAPVYERFTFNGGGKRNDVSGGAGAEDDDSRGQQQPQDVEKAQECDNNGSNSVSSQQQLGVTGVGKRPRPPSRRPPSAFSLDPVTVRGRPLATGERIRGATVSTPPLRKLLFSATLTNNPQKLAGLDVVNPLIYTATEFS-TAAGGQRRETSGADGDPR-PSQETRRSNLDGIGTAVEGG--GRFSTPATLEETYTVCDSQAKPLVLLSLLREMVGRQADLSVVFTSSVDSTHRLFRLLQLFGG 654
BLAST of mRNA_H-paniculata_contig12340.1480.1 vs. uniprot
Match: A0A835YS10_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS10_9STRA) HSP 1 Score: 297 bits (760), Expect = 5.210e-91 Identity = 193/392 (49.23%), Postives = 225/392 (57.40%), Query Frame = 1 Query: 1 QALVRRRVMRLRALVLLPSRDLAMQVHAVFQRYANGTGLKVGLAIGQTNFLEEQLSLVGAAALAGNPVATARASFLRGQGHHTGRDPGKEFGVDLEGGRVPAGGASEVDIVVATPGRLLDHLEQTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVMKAAYRREPG---CAAPILKVTTKHTAENDRNHYRHLPTAVR-------------------------------LEPVTVRGRPLATGEHVRGATVATPPLRKLLFSATLTSNPQKLAGLDVVNPIVYTARSIGQTLSGSSIRPRRGEDGVVRRPSQKTRRLDLDTVGAGAGGGTGGRFSTPATLEEMYTVCDSQAKPLVLLSLLREATGRKKQLAVVFTSSVDSTHRLFRLLQLFG 1074 QAL+ RRV RLRAL LLPSRDLA QVH VF Y GTGL+VGLAIGQ+N L+EQLSLVG AL+ +PVA ARA ++ G+ P F + VP GG SEVDI+VATPGRLLDHLEQTPGFTLQHL YLV+DEADRLLNQSYQ WV +V++AAYR G C + ++ A ++P TVRGRP A V G AT PLRKLLFSATLT+NPQKLA L + NP+ YTAR G+ G V P Q+T R L+ G G +STPA+L E +C + KPL+LL+LL L VVF SSVDSTHRL RLLQLFG Sbjct: 114 QALLPRRVRRLRALALLPSRDLATQVHGVFTTYCTGTGLRVGLAIGQSNLLDEQLSLVGTTALSNSPVAAARA-WVGGKSGGLRAPPAGAFARGMSAA-VPLGGVSEVDILVATPGRLLDHLEQTPGFTLQHLMYLVVDEADRLLNQSYQDWVGRVLEAAYRAREGSVTCGSSSSPISNPSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQPTTVRGRPGAAEGRVTGPIAATLPLRKLLFSATLTNNPQKLASLGLANPVFYTARE-GRGXXXXXXXXXXXXXGSVAAPEQRTDRFTLEARDGGDGEAADA-YSTPASLTERTLLCAAAEKPLLLLALLLRGPVHGV-LTVVFASSVDSTHRLARLLQLFG 500
BLAST of mRNA_H-paniculata_contig12340.1480.1 vs. uniprot
Match: A0A7S4QRG8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QRG8_9STRA) HSP 1 Score: 210 bits (534), Expect = 4.130e-59 Identity = 158/392 (40.31%), Postives = 200/392 (51.02%), Query Frame = 1 Query: 22 VMRLRALVLLPSRDLAMQVHAVFQRYANGTGLKVGLAIGQTNFLEEQLSLVGAAALAG-----------------NPVATARASFLRGQGHHTGRDPGKEFGVDLEGGRVPAGGASEVDIVVATPGRLLDHLEQTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVMKAAYRREPGCAAPILKVTTKHTAENDRNHYRHLP----------TAVRLEPVTVRGRPLA----------TGEHVRGATVATPPLRKLLFSATLTSNPQKLAGLDVVNPIVYTARSIGQTLSGSSIRPRRGEDGVVRRPSQKTRRLDLDTVGAGAGGGTGGRFSTPATLEEMYTVCDSQAKPLVLLSLLREA------TGRKKQLAVVFTSSVDSTHRLFRLLQL 1068 V RLRALV+LPSRDLA QV+ VF RY G+ L VGLAIGQ +F EQ SLV AG +P+ T A + D + V + +P G S VD++VATPGRL+DH+E+TPGFTLQHLR+LVIDEADRL+NQSYQ W+ +VM+AA +A + + ND N H T++ L+P+T R + T V A T PLRKLLFSATLT +PQKLA L +VNP + A + + R D SQ+ R+S P L E C +Q KPLVLL+LL E T + + VVFT+S+DSTHRL RLLQ+ Sbjct: 18 VKRLRALVVLPSRDLASQVYNVFDRYTQGSDLCVGLAIGQKDFATEQKSLVLGDDNAGLCSSSYDHDTAQIQYALDPINTHSALEIF--------DYDADINVTSKKCSLPRAGRSAVDVLVATPGRLMDHIEKTPGFTLQHLRFLVIDEADRLVNQSYQNWIGRVMRAA-------SAASAFDSCGDSGVNDNNKDGHSAVTRLETASDRTSLILDPITWRKGGMDGTSFDTNATNTASFVPAAVCQTVPLRKLLFSATLTKDPQKLASLGLVNPKHFDAHRL---------KVRTNNDSNDNMESQQ-------------------RYSVPEHLSEFMVECTAQQKPLVLLALLLEQYQTNIRTHQPNGIIVVFTASLDSTHRLTRLLQI 366
BLAST of mRNA_H-paniculata_contig12340.1480.1 vs. uniprot
Match: A0A7S3V688_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V688_9STRA) HSP 1 Score: 209 bits (533), Expect = 6.210e-58 Identity = 153/388 (39.43%), Postives = 199/388 (51.29%), Query Frame = 1 Query: 4 ALVRRRVMRLRALVLLPSRDLAMQVHAVFQRYANGTGLKVGLAIGQTNFLEEQLSLVGAAALAG-NPVATARASFL-------RGQGHHTGRDPGKEFGVDLEGG-------------RVPAGGASEVDIVVATPGRLLDHLEQTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVMKAAYRREPGCAAPILKVTTKHTAENDRNHYRHLPTAVRLEPVTVRGRPLATGEHVRGATVATP-----PLRKLLFSATLTSNPQKLAGLDVVNPIVYTARSIGQTLSGSSIRPRRGEDGVVRRPSQKTRRLDLDTVGAGAGGGTGGRFSTPATLEEMYTVCDSQAKPLVLLSLLRE------ATGRKKQLAVVFTSSVDSTHRLFRLLQLF 1071 +L RR+ RLRALV+LPSRDLA QV VFQRY+ G+ L +GLAIGQT+F EQ SL+ + G P R + ++ PG + V L G P GG S VD++V TPGRL+DHL++TPGFTLQHLR+L+ DEADRL+NQ YQ W+ +V++AA +A DR+ +L+PVT R R + + T T LRKLLFSATLT +P+KLA L +VNP + A S+ +S S P+ T +S P L E C+++ KPLVL++ L E G+ + VVFTSSVDSTHRL RLLQLF Sbjct: 245 SLANRRIKRLRALVVLPSRDLAAQVFKVFQRYSKGSDLSIGLAIGQTDFEAEQSSLIFEKKMIGFQPREEYRCQYALKPFSVKNATKAYSFDAPGDKSDVSLGGCWAHGDLKDFPDLCDTPIGGKSAVDVLVCTPGRLIDHLDKTPGFTLQHLRFLIADEADRLVNQGYQDWIRRVVEAA------------------SAGPDRSLNMDSCGLQKLDPVTWR-RGIDANDSNHANTQDTNVCRSVQLRKLLFSATLTKDPRKLASLGLVNPKYFDAHSLNNKVSASQ---------DANTPNHST-------------------YSLPGGLSEFMVECNAEQKPLVLMAFLLEQGLLDKGEGQTNGIVVVFTSSVDSTHRLARLLQLF 585
BLAST of mRNA_H-paniculata_contig12340.1480.1 vs. uniprot
Match: M4B1B7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1B7_HYAAE) HSP 1 Score: 195 bits (495), Expect = 1.210e-53 Identity = 136/361 (37.67%), Postives = 183/361 (50.69%), Query Frame = 1 Query: 1 QALVRRRVMRLRALVLLPSRDLAMQVHAVFQRYANGTGLKVGLAIGQTNFLEEQLSLVGAAALAGNPVATARASFLRGQGHHTGRDPGKEFGVDLEGGRVPAGGASEVDIVVATPGRLLDHLEQTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVMKAAYRREPG----CAAPILKVTTKHTAENDRNHYRHLPTAVRLEPVTVRGRPLATGEHVRGATVATPPLRKLLFSATLTSNPQKLAGLDVVNPIVYTARSIGQTLSGSSIRPRRGEDGVVRRPSQKTRRLDLDTVGAGAGGGTGGRFSTPATLEEMYTVCDSQAKPLVLLSLLREATGRKKQLAVVFTSSVDSTHRLFRLLQLF 1071 Q L+ R V R+RAL+++PSRDLA+QVHA+ Q + T L GLA+GQ+NF+ EQ +LVG ++G V A GG S VDIVVATPGRL+DHLEQT GFTLQHL+ V+DEADRLL+QSYQ W+ KV + + + A VT + DR R PL ++L SATLT NP+KLA + + N + T I L+ ++ + V + + V + A R+STP L+E + CD+ +KPL+LL LL E G L+++FT+SV STHRL RLLQL+ Sbjct: 84 QRLLSRVVCRVRALIVVPSRDLAVQVHAIVQAFCQNTPLTCGLAVGQSNFVVEQRALVGDCHVSGQDVKDAM-----------------------------HGGQSAVDIVVATPGRLVDHLEQTRGFTLQHLQLFVVDEADRLLSQSYQDWIAKVYSSVFAGQEVDDDVLAGEACGVTWRRQDSIDRRRIRT-------------------------------PLTRVLLSATLTRNPRKLAAIGMSNAELTTIGRIDDPLADNA------KQSTVGDSDNEDEKEGSKEVASSAK-----RYSTPKNLDEYWIECDTGSKPLILLELLSEFAG---SLSIIFTASVSSTHRLARLLQLY 370
BLAST of mRNA_H-paniculata_contig12340.1480.1 vs. uniprot
Match: UPI0009E5B374 (ATP-dependent RNA helicase DDX51-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5B374) HSP 1 Score: 195 bits (496), Expect = 9.450e-53 Identity = 140/362 (38.67%), Postives = 191/362 (52.76%), Query Frame = 1 Query: 1 QALVRRRVMRLRALVLLPSRDLAMQVHAVFQRYANGTGLKVGLAIGQTNFLEEQLSLVGAAALAGNPVATARASFLRGQGHHTGRDPGKEFGVDLEGGRVPAGGASEVDIVVATPGRLLDHLEQTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVMKAAYRREPGCAAPILKVTTKHTAENDRNHYRHLPTAVRLEPVTVRGRPLATGEHVRGATVATP-PLRKLLFSATLTSNPQKLAGLDVVNPIVYTAR-SIGQTL-SGSSIRPRRGEDGVVRRPSQKTRRLDLDTVGAGAGGGTGGRFSTPATLEEMYTVCDSQAKPLVLLSLLREATGRKKQLAVVFTSSVDSTHRLFRLLQLFGG 1077 Q+L+RR V LRALV+LP++DLA QV VF+ +A GT L+VGLA G +F ++Q LV NP + G +S VDI++ TPGRL+DH+ TP FTL H+R+LVIDEADRLL+QSY GW+ KV+KAAY R+ +T +NDR P + L+ T+R P G H + + PL+KLLFSAT+T +P+KLA L + PI++T S+ QT SG S A T GR+S P L E TVC++ KPL++L L T K Q + F SS+++THRL+ L++L+GG Sbjct: 302 QSLLRRVVCHLRALVILPTKDLANQVKQVFEMFAEGTNLRVGLASGSKSFAKDQEQLV-------NPSS--------------------------------CGSSSRVDILICTPGRLVDHISSTPNFTLHHVRFLVIDEADRLLDQSYHGWLSKVLKAAYHRQ----------STSGVFKNDR------PVSCSLQ--TIRSPP---GLHTAASFASIQLPLQKLLFSATMTHSPEKLAPLQLYQPILFTVTASVNQTNNSGEST----------------------------ADATTAGRYSIPEGLSEYMTVCNNGEKPLMVLYFL---TQLKFQRVLCFASSLEATHRLYLLVKLYGG 572
BLAST of mRNA_H-paniculata_contig12340.1480.1 vs. uniprot
Match: A0A2D4BV54_PYTIN (DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV54_PYTIN) HSP 1 Score: 192 bits (489), Expect = 1.850e-52 Identity = 143/371 (38.54%), Postives = 189/371 (50.94%), Query Frame = 1 Query: 1 QALVRRRVMRLRALVLLPSRDLAMQVHAVFQRYANGTGLKVGLAIGQTNFLEEQLSLVGAAALAGNPVATARASFLRGQGHHTGRDPGKEFGVDLEGGRVPAGGASEVDIVVATPGRLLDHLEQTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVMKAAYRREPGCAAPILKVTTKHTAENDRNHYRHLPTAVRLEPVTVRGRPLATGEHVRGATVATPPLRKLLFSATLTSNPQKLAGLDVVNPIVYTARSIGQTLSGSS-IRPRRGEDGVVRRPSQKTRRLDLDTVGAGAGGGTGGR-----------FSTPATLEEMYTVCDSQAKPLVLLSLLRE--ATGRKKQLAVVFTSSVDSTHRLFRLLQLF 1071 Q L+ R V RLRAL++LPSRDLA+QVH + ++ T L+ GLAIGQ+NF EQ +LVG+ + H R K VD GG S+VDI+VATPGRL+DHLEQTPGFTLQHL++LV+DEADRLLNQSYQ W+ K+ + + G L+ TA+ H A+ + PL ++L SATLT NP+KLA + + N + I L+ ++ I D DTV A A ++TPA L+E CD+ +KPLVLL +L E A+G L ++FT+SV STHRL RLLQL+ Sbjct: 93 QRLLPRVVYRLRALIVLPSRDLAIQVHQIVSQFCESTPLRCGLAIGQSNFAAEQQTLVGS-------------DGRQPHQHGISRTTSKSMAVD--------GGDSKVDILVATPGRLVDHLEQTPGFTLQHLQFLVVDEADRLLNQSYQDWIAKIYASIFN---GQEVEELEAAMASTAD----HXTRRSDAINRRRIRT-------------------PLTRVLLSATLTRNPRKLASIGMSNAELTKIGRIDDPLADNARIGDDAESDXXXXXXXXXXXXXXDDTVTAHADEHESTAIVTATAKEEKMYATPANLDEYVXECDTGSKPLVLLEILSEYKASG----LTIIFTASVXSTHRLARLLQLY 412
BLAST of mRNA_H-paniculata_contig12340.1480.1 vs. uniprot
Match: B8BZV2_THAPS (Atp-dependent RNA helicase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZV2_THAPS) HSP 1 Score: 187 bits (474), Expect = 3.180e-51 Identity = 140/362 (38.67%), Postives = 180/362 (49.72%), Query Frame = 1 Query: 28 RLRALVLLPSRDLAMQVHAVFQRYANGTGLKVGLAIG----QTNFLEEQLSLVGAAALAGNPVATARASFLRGQGHHTGRDPGKEFGVDLEGGRVPAGGASEVDIVVATPGRLLDHLEQTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVMKAAYRREP-GCAAPILKVTTKHTAENDRNHYRHLPTAVRLEPVTVRGRPLATGEHVRGATVATPPLRKLLFSATLTSNPQKLAGLDVVNPIVYTARSIGQTLSGSSIRPRRGEDGVVRRPSQKTRRLDLDTVGAGAGGGTGGRFSTPATLEEMYTVCDSQAKPLVLLSLL-------REATG---RKKQLAVVFTSSVDSTHRLFRLLQL 1068 RLRALV+LP RDLA QVH VF RYA G+ LK+GLA+G +++ + E+ SLV T R RD G + + GG S VDI+VATPGRL+DHL+ TPGFTLQHLR+LVIDEADRL+NQ YQ WV +V++A+ G + P+++ K A GE V G PLRK+LFSATLT +PQKLA L + NP + A + +GS +S P L E C ++ KP+VLL+LL ++ G + L++VFTSSVDSTHRL RLLQL Sbjct: 58 RLRALVVLPGRDLAKQVHDVFVRYAKGSHLKIGLAVGGGKKKSDLVYERRSLVAY-------DGTTR------------RDNGIQVFPEF-------GGQSAVDILVATPGRLMDHLDSTPGFTLQHLRFLVIDEADRLVNQPYQNWVGRVLEASNSSNRFGSSVPVVRHGEKDQANTG-------------------------GELVSGMFGRPVPLRKMLFSATLTQDPQKLAVLGLKNPKHFDANQVENIKAGS--------------------------------------YSVPEGLTERMVECTAEQKPMVLLALLLDTEQLHSDSAGDGVKGVNLSIVFTSSVDSTHRLARLLQL 330
BLAST of mRNA_H-paniculata_contig12340.1480.1 vs. uniprot
Match: K0SZ73_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZ73_THAOC) HSP 1 Score: 190 bits (482), Expect = 1.440e-50 Identity = 150/399 (37.59%), Postives = 199/399 (49.87%), Query Frame = 1 Query: 28 RLRALVLLPSRDLAMQVHAVFQRYANGTGLKVGLAIG----QTNFLEEQLSLVGAAA-----------------LAGNPVATARASFLRGQGHHTGRDPGKEFGVDLEGGRVPAG-------GASEVDIVVATPGRLLDHLEQTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVMKAAYRREPGCAAPI-LKVTTKHTAENDRNHYRHLPTA--VRLEPVTVR-----------GRPLATGEHVRGATVATP-PLRKLLFSATLTSNPQKLAGLDVVNPIVYTARSIGQTLSGSSIRPRRGEDGVVRRPSQKTRRLDLDTVGAGAGGGTGGRFSTPATLEEMYTVCDSQAKPLVLLSLLR---------EATGRKKQLAVVFTSSVDSTHRLFRLLQL 1068 RLRALV+LPSRDLA QVH VF RY+ G+ +K+GLA+G +T+ E+ SLV + +G P+ A A + + F D G + G S VDI+V TPGRL+DHL+ TPGFTLQHLR++VIDEADRL+NQ YQ W+ +V++A+ C P+ L ++ + E R R P ++PVT R G T + G T+ P PLRKLLFSATLT +PQKLA L + NP Y A + + SGS+ + G++ P L E C ++ KPLVLL+LL E++ + L +VFTSSVDSTHRL RLLQL Sbjct: 259 RLRALVVLPSRDLARQVHGVFMRYSKGSRIKIGLAVGGGRKRTDLTNERRSLVVESQHESTGHYKEDDGTVIRRRSGGPLEEANARVRHSFDPTSISEALSAF--DGRGSKDSCFEATPKICGISAVDILVCTPGRLVDHLDSTPGFTLQHLRFIVIDEADRLVNQPYQNWIRRVLQAS--NSENCFEPLNLDMSFR---EYIRQPLRTAPDGQTFNIDPVTHRIAGSGAAHSLLGDSNTTESGLIGGTIGRPVPLRKLLFSATLTQDPQKLARLGLDNPKHYDANYLKKHQSGSATEEAKA-----------------------------GKYFLPVGLRESMVECTAEQKPLVLLALLLDERRQHKMVESSEQAADLTIVFTSSVDSTHRLARLLQL 621
BLAST of mRNA_H-paniculata_contig12340.1480.1 vs. uniprot
Match: B7G364_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G364_PHATC) HSP 1 Score: 184 bits (466), Expect = 2.000e-50 Identity = 131/361 (36.29%), Postives = 185/361 (51.25%), Query Frame = 1 Query: 4 ALVRRRVMRLRALVLLPSRDLAMQVHAVFQRYANGTGLKVGLAIGQTNFLEEQLSLVGAAALAGNPVATARASFLRGQGHHTGRDPGKEFGVDLEGGRVPAGGASEVDIVVATPGRLLDHLEQTPGFTLQHLRYLVIDEADRLLNQSYQGWVEKVMKAAYRREPGCAAPILKVTTKHTAENDRNHYRHLPTAVRLEPVTVRGRPLATGEHVRGATVATPPLRKLLFSATLTSNPQKLAGLDVVNPIVYTARSIGQTLSGSSIRPRRGEDGVVRRPSQKTRRLDLDTVGAGAGGGTGGRFSTPATLEEMYTVCDSQAKPLVLLSLL------REATGRKKQLAVVFTSSVDSTHRLFRLLQL 1068 +L R++ RLRALV+LPSRDLA QV VF+ + G+ LKVGLAIGQ++F+ EQ++++ A +F G H DL R P S +D++V TPGRL+DHL+ TPGF+L+HLR+L++DEADRLL+Q+Y W+ +V+++A G V T N + YR + ++V PV LRK L SATLT +PQKLA L +VNP + + R G G ++K +S P L E C ++ KP+VLL+L+ +++ KQ +VFT+S+DSTHRL RLLQL Sbjct: 77 SLANRKIRRLRALVVLPSRDLANQVFKVFKSFMEGSDLKVGLAIGQSDFVAEQMAIL------------ALQAFEDGNDH------------DLPEKRDPQ---STIDVLVCTPGRLVDHLDNTPGFSLEHLRFLIVDEADRLLSQTYHNWIGRVIQSANSGRGG-------VVGDDTDFNTNDSYRSVASSV-CRPVQ---------------------LRKFLVSATLTRDPQKLASLKLVNPKHFDVHQL-----------RTGHQGFFNTNTKK--------------------YSMPEGLHEHTVECTAEQKPIVLLALVLDQLTPQQSQSSSKQSVIVFTASLDSTHRLARLLQL 350 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12340.1480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12340.1480.1 >prot_H-paniculata_contig12340.1480.1 ID=prot_H-paniculata_contig12340.1480.1|Name=mRNA_H-paniculata_contig12340.1480.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=351bp MRLRALVLLPSRDLAMQVHAVFQRYANGTGLKVGLAIGQTNFLEEQLSLVback to top mRNA from alignment at H-paniculata_contig12340:658..6644+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12340.1480.1 ID=mRNA_H-paniculata_contig12340.1480.1|Name=mRNA_H-paniculata_contig12340.1480.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5987bp|location=Sequence derived from alignment at H-paniculata_contig12340:658..6644+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12340:658..6644+ >mRNA_H-paniculata_contig12340.1480.1 ID=mRNA_H-paniculata_contig12340.1480.1|Name=mRNA_H-paniculata_contig12340.1480.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2106bp|location=Sequence derived from alignment at H-paniculata_contig12340:658..6644+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |