mRNA_H-paniculata_contig1234.1479.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1234.1479.1
Unique NamemRNA_H-paniculata_contig1234.1479.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1234.1479.1 vs. uniprot
Match: A0A6H5JCH7_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH7_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 4.580e-86
Identity = 303/659 (45.98%), Postives = 334/659 (50.68%), Query Frame = 3 
Query:  759 PRTSTYTASSASHRLFRQAKPESARSWHQSHSSIDNDGLPGADKSRDGELEGAISPA----------SWHRSDNKANNSTSSTSSSNVVSQPPGLSIPSQQQXXXXXQEHDSSWRFSASNR-NPALMSHRIPHDTSRPPNEVLDGSDVLQQISNLTSTEPSNEREVFVGGLRESEDSVHITEEELATYFSKFGVIESVSINRDDRTHRGRGFAFVKFFQESAALNAVVADASTHVIRGTTVSVQWSRGAKDGG--GDRPRRRGSNTSATSSGS---PSRSS-RNSPKMGLFSSGGGPKGXXXXXXXXXXXXXCGAGCSHGYSPPRGRGKAL----PHTGGLLGGVPSGFQYGAAHSAATQDLNQQMVCVVVPAQRAAALGLSHHPTHALSS---CSSRGSPPSDLHFIPLGSGSGGS--------GYPSHTRSHSLTPSSSSSGHGVSSGVVGYGQYEHHPH---------TISAPPHHHSTSSHKPVTNHSYGGXXXXXXXXXXX---------------SHSSVHMPPVHQQQPRRRGRGEPRGHLPAHCVGGQQQHQQSRSSTYPPEYERCQQQSQGVTFSHST---SYPPPGWSGDGPAARGMRHDAL---RSQSPPTLMPSEGRSGGGLKRPPPTPPRGYELPYS--RYNSSAG 2543
            P  + Y   SA HRLFR A PE  R   Q     +   L G D         A SP           SWH SD           S      PPGL                    +S SNR N      RI     R   EVLDGSDVLQQISN+TSTEPSNEREVFVGGLRESED+VHITEEELATYF+KFGVIESVSINRDDRT RGRGFAFVKFFQE+AALNAVVADASTHVIRGTTVSVQWSRGAKD G  GDRPRR               PS  S R+  + G+F   GG   XXXXXXXXXX   CG GCSHG+SP R RG       P  GG  GGVP GF  G  H    +  NQ MVCVVVPAQRAAALG + HP H   S   C+SRG+ P D HF  L   +  S        GY SHTRS+S  P S                     H           S  PHH   +            XXXXXXXXXXX               +  ++HMPP+ ++   R+GR EPR + PA   G       S SS    EYER  Q    +   H+     Y   G SG G A  G    AL   RSQSPP ++ S  R GGG  RPP   PR Y+  YS  RYN   G
Sbjct:  115 PAVAMYRQMSA-HRLFRAAPPEPKR---QQWKVCEETPLAGDDTVA---ASAAASPMCGEDSRLRSLSWHASD----------CSRRSPPPPPGL-------------------EYSHSNRKNDRFFPKRI---VGRDDREVLDGSDVLQQISNVTSTEPSNEREVFVGGLRESEDAVHITEEELATYFAKFGVIESVSINRDDRTQRGRGFAFVKFFQEAAALNAVVADASTHVIRGTTVSVQWSRGAKDAGSGGDRPRRXXXXXXXXXXXXXXXPSNGSGRSCARPGMFPHKGGGXXXXXXXXXXXXAGACGVGCSHGFSPMRSRGAGHSMHGPSAGG--GGVPYGFG-GGRHG---EHHNQPMVCVVVPAQRAAALGFAPHPPHGFHSTGKCTSRGTAPCDGHFSSLAQSNAASXXXXXXHPGYASHTRSNSQ-PMSHGXXXXXXXXXXXXXXXXXXXHXXFXXXXXGAASGTPHHLLVNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSYGAPPAMHMPPMPRE---RQGRAEPRDY-PAGASGS------SGSSPSFGEYERSSQSESHLHSPHALPEWGYDDAGGSGAGRAVGGSMATALGVTRSQSPPPMVRS--RIGGGAPRPPSASPRAYDGHYSSTRYNGRGG 715
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BLAST of mRNA_H-paniculata_contig1234.1479.1 vs. uniprot
Match: D7FM19_ECTSI (RNA recognition motif. (A.k.a. RRM, RBD, or RNP domain) containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM19_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 9.400e-38
Identity = 82/100 (82.00%), Postives = 85/100 (85.00%), Query Frame = 3 
Query: 1086 NRNPALMSHRIPHDTSRPPNEVLDGSDVLQQISNLTSTEPSNEREVFVGGLRESEDSVHITEEELATYFSKFGVIESVSINRDDRTHRGRGFAFVKFFQE 1385
            N+N      RI     R   EVLDGSDVLQQISNLTSTEPSNEREVFVGGLRESED+VHITEEELATYF+KFGVIESVSINRDDRT RGRGFAFVKFFQE
Sbjct:  199 NKNDRFFPKRI---VCRDDREVLDGSDVLQQISNLTSTEPSNEREVFVGGLRESEDAVHITEEELATYFAKFGVIESVSINRDDRTQRGRGFAFVKFFQE 295
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BLAST of mRNA_H-paniculata_contig1234.1479.1 vs. uniprot
Match: D7FM18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM18_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 2.670e-23
Identity = 129/366 (35.25%), Postives = 154/366 (42.08%), Query Frame = 3 
Query: 1644 CGAGCSHGYSPPRGRGKAL----PHTGGLLGGVPSGFQYGAAHSAATQDLNQQMVCVVVPAQRAAALGLSHHPTHALSS---CSSRGSPPSDLHFIPLGSGSGGS------------GYPSHTRSHSLTPSSSSSGHGVSSGVVGYGQYEHH---PH---------TISAPPHHHSTSSHKPVT---------------------------NHSYGGXXXXXXXXXXXSHSSVHMPPVHQQQPRRRGRGEPRGHLPAHCVGGQQQHQQSRSSTYPPEYERCQQQSQGVTFSHST---SYPPPGWSGDGPAARGMR---HDALRSQSPPTLMPSEGRSGGGLKRPPPTPPRGYELPYS--RYNSSAG 2543
            CG GCS+G+SP R RG       P  GG  GGVP G+  G  H    +  NQ MVCVVVPAQRAAALGL+ HP H L S   C+SRG+ P D HF  L   S               GY SHTRSHS   S     HG          Y HH   PH           +  PHH S S                                   SYGG              ++HMPP+ ++   R+GR EPR + P+   G          S    EYER  Q    +  +++     Y   G SG G A  G     H  +RSQSPP ++ S  R+GGG  RPP   PR Y+  YS  RYN   G
Sbjct:   25 CGVGCSNGFSPMRSRGAGHSIHGPSAGG--GGVPYGYG-GGRHG---EHHNQPMVCVVVPAQRAAALGLAPHPPHGLHSTGKCTSRGTAPCDGHFSSLAQSSXXXXXXXXXXXXXHPGYASHTRSHSQPIS-----HGXXXXXXXXXXYGHHGGSPHGNFDHXXXXXAAGTPHHLSVSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSYGGPP------------AMHMPPMPRE---RQGRAEPRDY-PSGASGXXXXXXXXXXSPSFGEYERSSQSESHLHSAYALPEWGYDDAGGSGAGRAGGGAMATAHGVVRSQSPPPMVRS--RNGGGAPRPPSASPRAYDGHYSSTRYNGRGG 361
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BLAST of mRNA_H-paniculata_contig1234.1479.1 vs. uniprot
Match: A0A7J7L5F8_9MAGN (RRM domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7L5F8_9MAGN)

HSP 1 Score: 56.2 bits (134), Expect = 5.870e-6
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 3 
Query: 1158 GSDVLQQISNL-TSTEPSNEREVFVGGLRESEDSVHITEEELATYFSKFGVIESVSINRDDRTHRGRGFAFVKFFQESAALNAVVADASTHVIRGTTVSVQ 1457
            G+ ++++I  L T T  S   ++F+  L     S + T+EEL   FS FG I+ VS+ RD RT R +GFAFV F  ES A  A+ A  +  +I G  + V+
Sbjct:    2 GTAMVRRIKTLITQTHRSFSSQIFISRL-----SFYTTDEELNRLFSPFGQIKQVSLVRDPRTQRPKGFAFVTFAMESEAQKALEA-MNGRIIGGRLIFVE 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1234.1479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JCH7_9PHAE4.580e-8645.98RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FM19_ECTSI9.400e-3882.00RNA recognition motif. (A.k.a. RRM, RBD, or RNP do... [more]
D7FM18_ECTSI2.670e-2335.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7J7L5F8_9MAGN5.870e-638.61RRM domain-containing protein n=1 Tax=Kingdonia un... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1234contigH-paniculata_contig1234:15908..24044 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score156.8
Seed ortholog evalue4.1e-35
Seed eggNOG ortholog2880.D7FM19
KEGG rclassRC00002,RC00017,RC02795
KEGG koko:K00850,ko:K03006,ko:K13024
KEGG ReactionR00435,R00441,R00442,R00443,R00756,R03236,R03237,R03238,R03239,R04779,R05799,R08964
KEGG Pathwayko00010,ko00030,ko00051,ko00052,ko00230,ko00240,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko03020,ko04070,ko04152,ko05016,ko05168,ko05169,ko05230,map00010,map00030,map00051,map00052,map00230,map00240,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map03020,map04070,map04152,map05016,map05168,map05169,map05230
KEGG ModuleM00001,M00180,M00345
Hectar predicted targeting categoryother localisation
EggNOG free text desc.poly(U) RNA binding
EggNOG OGsKOG4205@1,KOG4205@2759
EC2.7.1.11,2.7.4.24,2.7.7.6
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko01009,ko03019,ko03021,ko03400
Exons5
Model size2690
Cds size2271
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1234.1479.1prot_H-paniculata_contig1234.1479.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1234 16327..24044 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928955.5408742-UTR-H-paniculata_contig1234:15907..163261622928955.5408742-UTR-H-paniculata_contig1234:15907..16326Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1234 15908..16326 +
1691480680.7321737-UTR-H-paniculata_contig1234:15907..163261691480680.7321737-UTR-H-paniculata_contig1234:15907..16326Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1234 15908..16326 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928955.5632637-CDS-H-paniculata_contig1234:16326..170551622928955.5632637-CDS-H-paniculata_contig1234:16326..17055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1234 16327..17055 +
1691480680.7455587-CDS-H-paniculata_contig1234:16326..170551691480680.7455587-CDS-H-paniculata_contig1234:16326..17055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1234 16327..17055 +
1622928955.5779269-CDS-H-paniculata_contig1234:17351..174231622928955.5779269-CDS-H-paniculata_contig1234:17351..17423Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1234 17352..17423 +
1691480680.7532585-CDS-H-paniculata_contig1234:17351..174231691480680.7532585-CDS-H-paniculata_contig1234:17351..17423Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1234 17352..17423 +
1622928955.5923944-CDS-H-paniculata_contig1234:18095..182601622928955.5923944-CDS-H-paniculata_contig1234:18095..18260Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1234 18096..18260 +
1691480680.76207-CDS-H-paniculata_contig1234:18095..182601691480680.76207-CDS-H-paniculata_contig1234:18095..18260Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1234 18096..18260 +
1622928955.6031792-CDS-H-paniculata_contig1234:21953..223611622928955.6031792-CDS-H-paniculata_contig1234:21953..22361Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1234 21954..22361 +
1691480680.7713134-CDS-H-paniculata_contig1234:21953..223611691480680.7713134-CDS-H-paniculata_contig1234:21953..22361Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1234 21954..22361 +
1622928955.61788-CDS-H-paniculata_contig1234:23147..240441622928955.61788-CDS-H-paniculata_contig1234:23147..24044Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1234 23148..24044 +
1691480680.7804885-CDS-H-paniculata_contig1234:23147..240441691480680.7804885-CDS-H-paniculata_contig1234:23147..24044Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1234 23148..24044 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1234.1479.1

>prot_H-paniculata_contig1234.1479.1 ID=prot_H-paniculata_contig1234.1479.1|Name=mRNA_H-paniculata_contig1234.1479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=757bp
MVTLGSIQPASFQGFHVPGPQQYDDALSLQSLQLALDDAASSMPTSSPGT
ANSTSNQCTTSVPASGTPAETMVLKKKLAPTPPSRRGSVSLISGSDRSLG
SPGDGKQADRTRLPRTSTYTASSASHRLFRQAKPESARSWHQSHSSIDND
GLPGADKSRDGELEGAISPASWHRSDNKANNSTSSTSSSNVVSQPPGLSI
PSQQQQHQHQQEHDSSWRFSASNRNPALMSHRIPHDTSRPPNEVLDGSDV
LQQISNLTSTEPSNEREVFVGGLRESEDSVHITEEELATYFSKFGVIESV
SINRDDRTHRGRGFAFVKFFQESAALNAVVADASTHVIRGTTVSVQWSRG
AKDGGGDRPRRRGSNTSATSSGSPSRSSRNSPKMGLFSSGGGPKGGGGHR
GGVGGGSSCGAGCSHGYSPPRGRGKALPHTGGLLGGVPSGFQYGAAHSAA
TQDLNQQMVCVVVPAQRAAALGLSHHPTHALSSCSSRGSPPSDLHFIPLG
SGSGGSGYPSHTRSHSLTPSSSSSGHGVSSGVVGYGQYEHHPHTISAPPH
HHSTSSHKPVTNHSYGGGGGGGHGHGHSSHSSVHMPPVHQQQPRRRGRGE
PRGHLPAHCVGGQQQHQQSRSSTYPPEYERCQQQSQGVTFSHSTSYPPPG
WSGDGPAARGMRHDALRSQSPPTLMPSEGRSGGGLKRPPPTPPRGYELPY
SRYNSSAGPGHGSGLDALPAGLSVTGRRHSGSSVMSSSSRISGLSSVSLS
RQDGGGG
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mRNA from alignment at H-paniculata_contig1234:15908..24044+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1234.1479.1 ID=mRNA_H-paniculata_contig1234.1479.1|Name=mRNA_H-paniculata_contig1234.1479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8137bp|location=Sequence derived from alignment at H-paniculata_contig1234:15908..24044+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCAGAACTGTGATTGGAGAGTTGTTTTTAAGGAAAATGGATGAGGGTGC
CTGCATGCAAGAGTCAACCTCATAATCGAGAGGCATCTGTCCACCTTATC
ACCAGCGACAACAGGAACAAAGGCAAATCGTTCTTGCCACGAGGAAGTCA
GTCTACAGGACAAACCGCGGGGTGCGGGTGTCCGCTGTGTCGTAGCTCTC
TAGACTTGACCTAATCAGTGGGTAAACACGTGGGCAAAGTACACATTAGG
GGCAGCACTTGTTGTCAATCATCCTGCTGGTAGGCTCACTAACACGACCC
GTGATCTCACAGGGGCAAACCAACACCGCGTGCGTAACCCGGGAGACGTC
CTACCTGAGTGCGTCTCACCAAACATCACAAGCACCGGAGTAAAGAGGAC
GCGCAGCAGTTGCAGCAGGATGGTCACGCTTGGCAGTATCCAACCTGCTA
GTTTCCAGGGATTTCACGTGCCGGGACCGCAGCAGTATGATGACGCGTTG
AGTCTCCAAAGCCTTCAGCTCGCCCTGGATGATGCAGCAAGTTCCATGCC
CACTTCCTCACCGGGGACCGCCAACAGCACCTCGAATCAGTGCACGACAT
CGGTGCCGGCGTCTGGGACGCCAGCGGAGACTATGGTGCTAAAGAAGAAG
TTGGCGCCGACACCCCCGTCTCGCCGAGGTTCGGTTAGCCTGATATCTGG
TTCAGACAGATCTCTGGGGTCGCCTGGGGATGGGAAGCAGGCGGACCGAA
CGAGGTTGCCTCGAACCTCAACATACACAGCCTCCTCTGCATCTCACCGT
CTGTTCCGCCAGGCCAAGCCCGAGTCTGCTAGGTCGTGGCACCAGTCTCA
CTCTTCTATTGACAATGATGGGTTACCGGGCGCAGATAAGAGCAGGGATG
GGGAGTTAGAGGGGGCCATATCTCCTGCTTCGTGGCACAGGAGTGATAAC
AAGGCAAACAACAGCACCAGCAGCACCAGCAGCAGCAACGTTGTATCGCA
ACCACCGGGGCTGTCGATACCATCACAGCAACAACAGCACCAGCACCAAC
AGGAACACGATAGTAGTTGGCGCTTCAGTGCAAGTAATAGGAATCCTGCT
CTAATGTCGCATAGGATTCCGCACGACACGAGTAGACCGCCGAACGAGGT
AAGTCATGGAGACTAGTCATGGCTGTCATTGCGGTAGGTCACGAGAGGGC
TGTGGCAATTTGTTTTGTCTTATCGTCCTTGTTCCGATCGTGTGTATACG
TGAAAAGGGCTGGTGGTAGCGATGATAGTATGTGCATGTGCCCTGTAAGT
AAAATACTTGAATGTAGTACATCTATCTCAAGTCACCTGTACGAGTGTTA
ATTCTTTGTGTGTGGAAGTCTCGACGGTGGGTTCACTACCCGTGTGTTGT
GTGTCTTTCCGTCCTTCCTTTGTACCGAACGTTGCTTCGATTAGGTACTG
GATGGGTCGGACGTGCTGCAGCAAATATCCAATCTCACAAGCACGGAGCC
TAGCAATGAGCGCGAGGTATGGTGACGTGGTATTTTCCCGACCTTTCTCC
GAAAATATAGTCGAGCGCCTTTTTCCTTTGTTGATTAGGCTCCAACGCGC
TGACATGTATATGAGACAGCAGGGCAAACGGTCTCCACCCTCCCACTCCC
TTATGTAATACCGTCTCTTCACTTGGCCTCGTGGGCCAGTGGCCGCATAG
ATTGCACACATGTACAGTTCCACGAGAACCACCGCTAGTCTGTGCTTATG
TCATGTGCTACAGAGCTCTGGGTGTTTATCTGGGCAGCAGGTCGTACGAA
TGTAATCAAAAACATGCGAGCAGAGTTATGCCTTAGAAACTGCATCGTTT
TTTTCATGATCTACTCACACTTTAGTGTTTGTGCACAACACCAATTTTTG
TTCAAAGTGTGTAGGCCATGTGAGTTTTTGTCACCTATTTTCACACCGGT
CCGCTAATTCTACCATCTTCGTCTGCCAGCATCGGTGGGTCGATGTGAGT
TTGTGGTTTCTCGAAATGGCCGATGTTACTTCAATGATTGTGTCCATTAT
CTGGTAAGTAGGTAGTGTTCACTACAGAGTGTACGCTTGCTTCCATCTAC
TGTGGCAGCTGCGAATTGCCGTTCATCCCTTGCTATGTGCGTGCATGATT
CTACATGCTGATTTCCATGTTGCGGGATTCCTCGCCAGGTCTTCGTCGGC
GGGTTGCGAGAGAGCGAAGATTCAGTACACATCACCGAAGAGGAGCTAGC
CACGTACTTCTCCAAGTTCGGCGTGATCGAAAGCGTCTCGATCAATAGAG
ATGACCGCACCCACAGAGGCCGAGGGTTTGCCTTCGTCAAATTCTTCCAA
GAGGTACGGATGTATGGATGCACGCACTTGTTCTAGTGAATGTACGTTGG
TGTAGGCGTGACACCCGAAACCTACAGGTGTACCGTTTGCATCCGTATTT
ACAAGATGCGTGTCCCAACAGCCAGTAGCACAAGCCACGATATTTCTTTC
CCAGGCGGTCTGGTCTCGGGTGCATTTTTCATCCATCGACCTGACGACAG
ACTACGTTGCACATTATTCTCCAGATAAACGAGTACGTAAAGTGGTTGTG
TCAAGAAATATTTCATGTCGGAGCCCGTCAGCTTTTTTTTTGTTCAGTCA
AGTTTGGCGTGTGCCCTCTGCCAAATGACTCACAATCTTTTTGTCGGTGG
ATATGCATTGGATGGAATATTTAACTTTATATGCTGTACTGTGTCGGTGT
GCAAAGCAGCGACAAGAGTACCTTATGTGTCTCGTATATTCTACTAGGTA
TGTGTGTGTTGGGGTTGTATCTACAAATCCCATCCCTTGCAAGGCCCAGC
CAACAACTTTAATTCAGTTCGTAAAACAGTTAGTGTGTATGTTGCCTTGT
AAACAGAGATCAGTTGTACTATTGAGATTTCAACTGTGGCATCACGAAGA
ATCGGAGATGAAAGGTAGAACGAATTCTGTTCGTGTTCGAGTACACGTAC
TACTGTAGATGACTAAGGGGTTTTGGGGGCTACTGAGGGTAATCTTCCGA
CTTGATAATGGTTGTTGTCCTGTAAGTAGTAAGTTAGCGGCATATTTCAG
GTTGCGGTTGGCCTTGGTGGCGTGCTTCTAAACATCTCAACAGCCCTTTC
CCCTGGAGACGCGGACCAGGCATGTTGGTTCACCGACATGCGCGGTTCAT
TGCGCCTGAACTCTTTCTATAGCCTGCCTGCCTGTTCATGATTAAATTAT
ACCGACAATGAAACGGTCTACTCCCAACTTGAACTGGAAGGCCGCTTGTC
GGCTAGAGAGGGTGCTGGGAAGATTGGACTGTCATTACTACTGACGGTAG
TTTCGCAACGGGTGGGACGCAACGGAGTCAATTCGGTTCTTTATATCACC
CTCGGTGCTACGCCCTTCGTAGGAAAAGCAAGTCAAATGTGGAAATATTG
CCGACTTGGACAGTAGTCCAATATCGCATTTGCTAGCAGGAAAAAATGGA
CGCCTGCCTTTTATCTGCCAGAACTGGTTATCAGCCGGAATAGGTCCCAA
TCCGACATGATGGTGCATTGGAAGACAAGTTTTATTTATTGTACAGATGT
TTTCGTCCCGCTCTTCTGGATGAGCATGGGAAACAGGGAGTACTCAACGT
TTCCGTCGGCAGCTGGGCACGCGGGTTGGCAGCGTTCAGCGAATTGTCTT
TCATCGTGTTTGAACCCATACCCAGTCGGCGAGTCTTCTTCCTTGCCCCT
CGTGTTCCCAAACTTTTTGGCCCACCGAGCATCTTCATCAAAAATTAAAA
TATTTCGAGAAGCACGTCTGCGTCACCCCTATAGAAGTGTGTGACGATAC
TTTATGCACAAGAATCTGCCCCGATTTTCGATCCTTGGCACAAGTTGTCG
ACGTCGAAGTTGGATAATGTCTGTTACACCGCAAAACCGCTGAAGAGCGG
GACAAATAAACTCGCGACTGAAAAGCACTTTGCGTTGAAAAGGCTTTTCT
TTCAGACTGGAATTTGATGGCTCAGAGAAATGCTTGAAATCCAGAACTAG
TCTATGCAGGAAGAGTTCGATCTGTATTCCATATTTAAAGAATCAATCGG
GTAAGTCAAGAATGCCCACTTACAAACGCAGCAACTAGGCCGATTCTCAC
AGTACACATGGACCCCCACCATGCCAACGCCGGGGAGTATCCATATCTCT
GGCACCAGCATCAAATTCACCACACTTTTACTTTGCCCGCTTGTGGAACT
TGGATGCGCCTTGCCCGCCAGCGGCACTGTCCCTGGCCCTGTGACTGTCT
CTTCGTCAGACCCAACCCTCCAGGCACTCTGTAGCTCCTTTCATGTGGTT
AGCATTATTGTTGGGTTGGATGAGGTTCTTATCCGACGGTCATTACTAGT
GGCATAGTGTGAGGCTTCGTAGGTGGGTAAACAAAAACGCTTACCTCAAA
GAGGTGGGTCCAGCGCTGCTGCGTTTTCCGCTTGTGCACTATGACTGCAA
AGCATGTTCATCACTAGGATTGCGGCGCAATAACCGTACATCTTTTTTGC
CCCCAGGACGGGCAACCGTAGCGGCAAGAAGTTAGCATGCCTCGCGGTTT
ACCCTAGAGACTTGGAACCCGTAAGCATGATTTGTAGGCCAACGAGAAAA
TCTCTCACACCACAATTTATTGTTCATACTTCTCCGGCTATCTTCATTTC
TGCATTGCACCCCTTAGCTTATCTGTCGGTTTGGGCGATTTGTTTTGGAG
AGATAGACTTTCGCTTTTGGCGAAAATGGCTTTGTTTTCCCGGCCGGTGA
TCGGCTGGGAAGATTCTTTGACATCTCGAAACTCCAAAAAGACAGTCCTG
CATGTTTCCGATCTCACATCGGAGGGAGTTCCAAAGTCGTATTAGAAAAG
TGCTCCAGGACGTTTATAAAGGAAGGTGAACCCAAGAACCCGACAAGAAT
AGTGGAACATAATGGCGACCAAGCGGGTTGTGTCGTGCTCCCTTTTGCAC
TCACTGGAGTACTCTAGTCGTACGCTGTGTCCCACGCACAATGTTTCCGA
GAGTGGACCCGTGAAGGGACGTGGTGAGGAACGTGGGTAACCATCATCAA
CGCTCGATATGCTAAGCGATGACATGAAGCAGGGAAACATGTCATTCCAC
CATGAATGCCGTGTGCGATGCGAGAGTGTTGTACTCCTCGTGATGCCTAA
CATTCCGGTGCACAGCTCTTCCCATGTGGTTCCGTACCAAGGAGACCCAC
CAACACGGCCAGCTATCGCGCCATATTCTTCATCTTTGCGGCTGCTTGTC
CGCGGGCAGACCGCCTGATGGTGCTGCTGTAAATTACGCGTATCGTTGGG
TTGATGCTTGTCTTTCCACCTGTCTGTACAGTCTTCAAAAGATGTGTACC
GTGTGGCTGCTCCTTCATCACTCAATGGACTGTGGAACTCATGTCAGCTG
CAATTTAGTTATGCCGCGTGCCGTTTCGAAGTCGCTGGTTGCTACCAAAG
TCGTTGTTCCCAACATCGATTTGGACTGAAAGGAAGAATCTTTCAAGGAG
AACGACCCAGATTCCTTTTTCGAAGGTATTGCTTGAAAAGACACGGCCTT
CGCACAAAAAGACGAAAAAGTATCACCGCAAGCACGCGATCACGTATGCT
GCCGGACAAGGCAAGTCCAACGGAATCGTCGTCGGCCAGCTTTTGACCCA
AGTAGAAGTATGCCTCCCTGACTTAACCAAGGATGATGACATTCCAGTCT
CGTCGCTTCCTCCTGTTCGCCGCCCGCTTGTTTGTTACCAGCATCTTCTG
TGATGCCAACTACTGTGCCAGTCGTGGTCCTTGCACAAGCACAGCACGTG
TGTCTGATTTGTTCATACACCTACGGAACATGAGCTGCACCGACTTCAAT
ACCACCAAAACGTCACCTTGAAGGTTTTTTATCAATCAGGTTTGGTTTAC
GCCGCCTCCCGTATTTCTATACTACACTGTTTCTGAACCGTCCTCCTTAC
CCCCCCCTCCCACCCCTACCCCCGCTGTCATTCGCCATTATTTTAGTCGG
CCGCGCTTAACGCCGTAGTGGCAGATGCGTCCACCCACGTCATTCGAGGC
ACCACGGTGAGCGTTCAGTGGTCCCGCGGCGCGAAAGATGGAGGGGGAGA
CCGCCCTCGGCGCCGCGGGTCGAACACGTCGGCCACGAGCTCCGGCTCGC
CCTCGCGCAGCAGTAGGAATTCGCCGAAGATGGGGCTGTTCTCTTCCGGA
GGCGGTCCAAAGGGTGGTGGAGGCCACCGGGGTGGGGTGGGTGGAGGGAG
CAGTTGTGGTGCAGGTTGCAGTCACGGGTACAGTCCGCCTCGGGGTCGAG
GCAAGGCGCTCCCGCACACGGGTGGCTTGTTGGGAGGGGTGCCTTCGGGA
TTCCAGTACGGGGCTGCTCACAGCGCGGCAACGCAGGATCTGAATCAGCA
GATGGTGAGAGTCGTGTGATGACGTTATGATGACTTGGCATGGCAGGAGT
AATCGATTTCCGCGTCGATTCTCGTGTTGTACTGGTGATCGCATCGATTG
GGGGAGGTAGTCTTCTGACGCAGGGTTTCAACTTTGCCCTGAGTACAGTT
ACATCGGCTGCAATAGCTGCTCCTTGCCGCGAGTGCCTCGATACCGCTGT
TAACACCCGCAAATTCCAGCTGGTAGACACCGCTTATGGCATACACAGCG
CGCAATCCGCTTCGCATATCACTGCTACAGGCGCAGTGTGCCTCGTGGCT
TTCACAGGAGTATTGTACTAACAATCCCGTGCCCCAGAACTTAACCAGCG
GAAATTCAATGCATTTTGCTCTGGCTCCTAATCCATAGCTTTAGTTTCAT
CGGAATCGCCGATGCGCTTGTCGTACACCACAGTCCCCGTTGTTCACTTA
TTTCGGTAGAAACGCTTGTATGGTTTTGAGCCGAGACCTTTGACTGAACC
ACTTGAAGTTACCTGCGTAATATCAACGTGAGAACAAAAAACCTATTACA
CTAGATTTGTGGAGCGCTACCATTTCTCCGAAGTAATCCAATTCGGTTGA
ATTGGTGTAAAGTCCGAGGTCAGTTCCATATTCTATCTCAACATGGGTAG
AGTGGAGTGATGTACGAGCTTTAGATCTTGCAATGGCTAGGGCAAGCCTG
ACTTTCGAATGCAATTGTTCGAGGGTGTCTGTGGTTGATGTAAAATTATT
TCTAATCTCCTCCGTCTTCGACCTGACAACCTGTCCACAGGTCTGCGTCG
TGGTCCCTGCACAACGTGCTGCTGCTCTCGGACTATCGCACCACCCCACT
CATGCCCTTTCTTCGTGCAGTTCACGAGGCAGCCCCCCAAGCGATTTGCA
TTTCATCCCTCTGGGCTCAGGTTCTGGTGGCAGCGGATACCCTTCTCACA
CGCGCTCCCACTCTCTCACGCCAAGCTCTTCAAGCAGTGGCCACGGCGTA
AGTAGTGGGGTCGTCGGGTACGGCCAGTACGAGCACCATCCTCACACCAT
CAGCGCGCCGCCGCACCATCATTCCACCTCCAGCCACAAGCCGGTGACCA
ATCATTCCTACGGCGGAGGCGGGGGAGGCGGACATGGACACGGCCATTCG
TCGCATTCGTCTGTACACATGCCACCCGTCCACCAGCAGCAACCGCGGCG
GCGGGGGCGTGGCGAGCCAAGGGGTCACCTTCCTGCGCACTGCGTTGGTG
GGCAGCAGCAGCATCAGCAATCGCGGTCTTCGACCTACCCACCGGAGTAT
GAGAGGTGTCAGCAACAGTCGCAAGGGGTCACCTTCTCGCACTCCACCTC
CTACCCGCCCCCCGGATGGAGTGGGGATGGCCCCGCGGCTAGGGGTATGC
GTCACGATGCTTTGAGGTCGCAGTCCCCGCCCACGCTGATGCCGTCTGAG
GGCCGGAGTGGGGGGGGCTTGAAGCGCCCCCCGCCGACACCCCCGCGTGG
CTACGAGCTTCCGTACAGTAGGTACAACAGCTCGGCTGGACCAGGTCACG
GAAGTGGGCTTGATGCGTTGCCGGCGGGCTTGAGCGTAACGGGCCGACGG
CACTCGGGCAGTTCCGTGATGTCGTCGTCTTCCAGGATCAGTGGACTTTC
ATCGGTGTCTTTGTCGCGGCAGGATGGGGGCGGGGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig1234:15908..24044+

>mRNA_H-paniculata_contig1234.1479.1 ID=mRNA_H-paniculata_contig1234.1479.1|Name=mRNA_H-paniculata_contig1234.1479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4542bp|location=Sequence derived from alignment at H-paniculata_contig1234:15908..24044+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCACGCTTGGCAGTATCCAACCTGCTAGTTTCCAGGGATTTCACGT
GCCGGGACCGCAGCAGTATGATGACGCGTTGAGTCTCCAAAGCCTTCAGC
TCGCCCTGGATGATGCAGCAAGTTCCATGCCCACTTCCTCACCGGGGACC
GCCAACAGCACCTCGAATCAGTGCACGACATCGGTGCCGGCGTCTGGGAC
GCCAGCGGAGACTATGGTGCTAAAGAAGAAGTTGGCGCCGACACCCCCGT
CTCGCCGAGGTTCGGTTAGCCTGATATCTGGTTCAGACAGATCTCTGGGG
TCGCCTGGGGATGGGAAGCAGGCGGACCGAACGAGGTTGCCTCGAACCTC
AACATACACAGCCTCCTCTGCATCTCACCGTCTGTTCCGCCAGGCCAAGC
CCGAGTCTGCTAGGTCGTGGCACCAGTCTCACTCTTCTATTGACAATGAT
GGGTTACCGGGCGCAGATAAGAGCAGGGATGGGGAGTTAGAGGGGGCCAT
ATCTCCTGCTTCGTGGCACAGGAGTGATAACAAGGCAAACAACAGCACCA
GCAGCACCAGCAGCAGCAACGTTGTATCGCAACCACCGGGGCTGTCGATA
CCATCACAGCAACAACAGCACCAGCACCAACAGGAACACGATAGTAGTTG
GCGCTTCAGTGCAAGTAATAGGAATCCTGCTCTAATGTCGCATAGGATTC
CGCACGACACGAGTAGACCGCCGAACGAGATGGTCACGCTTGGCAGTATC
CAACCTGCTAGTTTCCAGGGATTTCACGTGCCGGGACCGCAGCAGTATGA
TGACGCGTTGAGTCTCCAAAGCCTTCAGCTCGCCCTGGATGATGCAGCAA
GTTCCATGCCCACTTCCTCACCGGGGACCGCCAACAGCACCTCGAATCAG
TGCACGACATCGGTGCCGGCGTCTGGGACGCCAGCGGAGACTATGGTGCT
AAAGAAGAAGTTGGCGCCGACACCCCCGTCTCGCCGAGGTTCGGTTAGCC
TGATATCTGGTTCAGACAGATCTCTGGGGTCGCCTGGGGATGGGAAGCAG
GCGGACCGAACGAGGTTGCCTCGAACCTCAACATACACAGCCTCCTCTGC
ATCTCACCGTCTGTTCCGCCAGGCCAAGCCCGAGTCTGCTAGGTCGTGGC
ACCAGTCTCACTCTTCTATTGACAATGATGGGTTACCGGGCGCAGATAAG
AGCAGGGATGGGGAGTTAGAGGGGGCCATATCTCCTGCTTCGTGGCACAG
GAGTGATAACAAGGCAAACAACAGCACCAGCAGCACCAGCAGCAGCAACG
TTGTATCGCAACCACCGGGGCTGTCGATACCATCACAGCAACAACAGCAC
CAGCACCAACAGGAACACGATAGTAGTTGGCGCTTCAGTGCAAGTAATAG
GAATCCTGCTCTAATGTCGCATAGGATTCCGCACGACACGAGTAGACCGC
CGAACGAGGTACTGGATGGGTCGGACGTGCTGCAGCAAATATCCAATCTC
ACAAGCACGGAGCCTAGCAATGAGCGCGAGGTACTGGATGGGTCGGACGT
GCTGCAGCAAATATCCAATCTCACAAGCACGGAGCCTAGCAATGAGCGCG
AGGTCTTCGTCGGCGGGTTGCGAGAGAGCGAAGATTCAGTACACATCACC
GAAGAGGAGCTAGCCACGTACTTCTCCAAGTTCGGCGTGATCGAAAGCGT
CTCGATCAATAGAGATGACCGCACCCACAGAGGCCGAGGGTTTGCCTTCG
TCAAATTCTTCCAAGAGGTCTTCGTCGGCGGGTTGCGAGAGAGCGAAGAT
TCAGTACACATCACCGAAGAGGAGCTAGCCACGTACTTCTCCAAGTTCGG
CGTGATCGAAAGCGTCTCGATCAATAGAGATGACCGCACCCACAGAGGCC
GAGGGTTTGCCTTCGTCAAATTCTTCCAAGAGTCGGCCGCGCTTAACGCC
GTAGTGGCAGATGCGTCCACCCACGTCATTCGAGGCACCACGGTGAGCGT
TCAGTGGTCCCGCGGCGCGAAAGATGGAGGGGGAGACCGCCCTCGGCGCC
GCGGGTCGAACACGTCGGCCACGAGCTCCGGCTCGCCCTCGCGCAGCAGT
AGGAATTCGCCGAAGATGGGGCTGTTCTCTTCCGGAGGCGGTCCAAAGGG
TGGTGGAGGCCACCGGGGTGGGGTGGGTGGAGGGAGCAGTTGTGGTGCAG
GTTGCAGTCACGGGTACAGTCCGCCTCGGGGTCGAGGCAAGGCGCTCCCG
CACACGGGTGGCTTGTTGGGAGGGGTGCCTTCGGGATTCCAGTACGGGGC
TGCTCACAGCGCGGCAACGCAGGATCTGAATCAGCAGATGTCGGCCGCGC
TTAACGCCGTAGTGGCAGATGCGTCCACCCACGTCATTCGAGGCACCACG
GTGAGCGTTCAGTGGTCCCGCGGCGCGAAAGATGGAGGGGGAGACCGCCC
TCGGCGCCGCGGGTCGAACACGTCGGCCACGAGCTCCGGCTCGCCCTCGC
GCAGCAGTAGGAATTCGCCGAAGATGGGGCTGTTCTCTTCCGGAGGCGGT
CCAAAGGGTGGTGGAGGCCACCGGGGTGGGGTGGGTGGAGGGAGCAGTTG
TGGTGCAGGTTGCAGTCACGGGTACAGTCCGCCTCGGGGTCGAGGCAAGG
CGCTCCCGCACACGGGTGGCTTGTTGGGAGGGGTGCCTTCGGGATTCCAG
TACGGGGCTGCTCACAGCGCGGCAACGCAGGATCTGAATCAGCAGATGGT
CTGCGTCGTGGTCCCTGCACAACGTGCTGCTGCTCTCGGACTATCGCACC
ACCCCACTCATGCCCTTTCTTCGTGCAGTTCACGAGGCAGCCCCCCAAGC
GATTTGCATTTCATCCCTCTGGGCTCAGGTTCTGGTGGCAGCGGATACCC
TTCTCACACGCGCTCCCACTCTCTCACGCCAAGCTCTTCAAGCAGTGGCC
ACGGCGTAAGTAGTGGGGTCGTCGGGTACGGCCAGTACGAGCACCATCCT
CACACCATCAGCGCGCCGCCGCACCATCATTCCACCTCCAGCCACAAGCC
GGTGACCAATCATTCCTACGGCGGAGGCGGGGGAGGCGGACATGGACACG
GCCATTCGTCGCATTCGTCTGTACACATGCCACCCGTCCACCAGCAGCAA
CCGCGGCGGCGGGGGCGTGGCGAGCCAAGGGGTCACCTTCCTGCGCACTG
CGTTGGTGGGCAGCAGCAGCATCAGCAATCGCGGTCTTCGACCTACCCAC
CGGAGTATGAGAGGTGTCAGCAACAGTCGCAAGGGGTCACCTTCTCGCAC
TCCACCTCCTACCCGCCCCCCGGATGGAGTGGGGATGGCCCCGCGGCTAG
GGGTATGCGTCACGATGCTTTGAGGTCGCAGTCCCCGCCCACGCTGATGC
CGTCTGAGGGCCGGAGTGGGGGGGGCTTGAAGCGCCCCCCGCCGACACCC
CCGCGTGGCTACGAGCTTCCGTACAGTAGGTACAACAGCTCGGCTGGACC
AGGTCACGGAAGTGGGCTTGATGCGTTGCCGGCGGGCTTGAGCGTAACGG
GCCGACGGCACTCGGGCAGTTCCGTGATGTCGTCGTCTTCCAGGATCAGT
GGACTTTCATCGGTGTCTTTGTCGCGGCAGGATGGGGGCGGGGGCGTCTG
CGTCGTGGTCCCTGCACAACGTGCTGCTGCTCTCGGACTATCGCACCACC
CCACTCATGCCCTTTCTTCGTGCAGTTCACGAGGCAGCCCCCCAAGCGAT
TTGCATTTCATCCCTCTGGGCTCAGGTTCTGGTGGCAGCGGATACCCTTC
TCACACGCGCTCCCACTCTCTCACGCCAAGCTCTTCAAGCAGTGGCCACG
GCGTAAGTAGTGGGGTCGTCGGGTACGGCCAGTACGAGCACCATCCTCAC
ACCATCAGCGCGCCGCCGCACCATCATTCCACCTCCAGCCACAAGCCGGT
GACCAATCATTCCTACGGCGGAGGCGGGGGAGGCGGACATGGACACGGCC
ATTCGTCGCATTCGTCTGTACACATGCCACCCGTCCACCAGCAGCAACCG
CGGCGGCGGGGGCGTGGCGAGCCAAGGGGTCACCTTCCTGCGCACTGCGT
TGGTGGGCAGCAGCAGCATCAGCAATCGCGGTCTTCGACCTACCCACCGG
AGTATGAGAGGTGTCAGCAACAGTCGCAAGGGGTCACCTTCTCGCACTCC
ACCTCCTACCCGCCCCCCGGATGGAGTGGGGATGGCCCCGCGGCTAGGGG
TATGCGTCACGATGCTTTGAGGTCGCAGTCCCCGCCCACGCTGATGCCGT
CTGAGGGCCGGAGTGGGGGGGGCTTGAAGCGCCCCCCGCCGACACCCCCG
CGTGGCTACGAGCTTCCGTACAGTAGGTACAACAGCTCGGCTGGACCAGG
TCACGGAAGTGGGCTTGATGCGTTGCCGGCGGGCTTGAGCGTAACGGGCC
GACGGCACTCGGGCAGTTCCGTGATGTCGTCGTCTTCCAGGATCAGTGGA
CTTTCATCGGTGTCTTTGTCGCGGCAGGATGGGGGCGGGGGC
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