mRNA_H-paniculata_contig12297.1457.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12297.1457.1
Unique NamemRNA_H-paniculata_contig12297.1457.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig12297.1457.1 vs. uniprot
Match: D7FHS6_ECTSI (Heat shock protein 40 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS6_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 1.540e-85
Identity = 149/285 (52.28%), Postives = 184/285 (64.56%), Query Frame = 1 
Query:    1 QILKAYETLGDPNLRREYDRSGMKEEVRVM--EEGTGPRYEDSPFGLFIRFGGGRGGMWFRYKGHGKRHAPDIVYSHQISFEEAFDGMVINVTVTRERLCKACGATGSSKPEEMPTCPLCQGKGYAYHLSNSHHNXXXXXXXXXXXXXXXXXXXST-NRRHRCSAAEGDICGGCGDGGGRDETATQEDEDSEESIPEFVHVVNTTCKVCGGMGRISDGRCPICGGRKVHLEAETMEVSIPPGAPFGHTVTLNGKAHQYPGKVDGALRVVAILLPHPRFERQGIRL 846
            +I +AYETL DP LR++YD +GMKE V  M  EE    RY+D+PFG+FIRFGGGRGG+ FRYKGHGKR APD++ +  ++FEEAF+G   NVTV RERLC+ CG TG+S+P EMPTC LC+GKGYAYHL   H +             XXX   S+ N R RCS        G   GGG D             +P + H VNTTCKVCGG G++SDG CP C GRKV +E ET EV++P G   GH V L GK  ++P K+ G+++VVA+   HPRFER G  L
Sbjct:   98 KIKEAYETLYDPILRQQYDLTGMKEGVNNMPGEEEPEERYQDAPFGIFIRFGGGRGGLSFRYKGHGKRRAPDLMVALPVTFEEAFEGKTANVTVARERLCRTCGGTGASEPGEMPTCNLCEGKGYAYHLFAVHESGTQSDHHSHGDRHXXXDDASSGNPRGRCSEHLDGRRDGVSHGGGGD------------GLPGYAHAVNTTCKVCGGTGKVSDGGCPDCRGRKVKVETETFEVTLPAGVLPGHAVILVGKGIEHPDKLPGSVQVVAVQNAHPRFERLGADL 370
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BLAST of mRNA_H-paniculata_contig12297.1457.1 vs. uniprot
Match: A0A7S2SQR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQR9_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 5.870e-16
Identity = 51/167 (30.54%), Postives = 71/167 (42.51%), Query Frame = 1 
Query:  265 NVTVTRERLCKACGATGSSKPEEMPTCPLCQGKGYAYHLSNSHHNXXXXXXXXXXXXXXXXXXXSTNRRHRCSAAEGDICGGCGDGGGRDETATQEDEDSEESIPEFVHVVNTTCKVCGGMGRISDGRCPICGGRKVHLEAETMEVSIPPGAPFGHTVTLNGKAHQY 765
            NVTV+R+RLC  C  TGSS P+++PTC +C G+G   HL                         +  R HR               G R                 F   VN+TC+ C GMG +SD +CP CGG +  LE     V++P GAP G    +  + +++
Sbjct:    1 NVTVSRQRLCPTCKGTGSSTPDDLPTCHMCNGRGVRLHLHEE---------LAHQSSGSSRLNEAFRRFHRT--------------GWRG----------------FRQSVNSTCQTCDGMGYLSDKKCPTCGGLRTVLEEAPFTVTVPAGAPEGWQFAMQDEGNEH 128
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BLAST of mRNA_H-paniculata_contig12297.1457.1 vs. uniprot
Match: A0A261Y2A0_9FUNG (Cysteine dioxygenase n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y2A0_9FUNG)

HSP 1 Score: 79.7 bits (195), Expect = 5.090e-13
Identity = 39/122 (31.97%), Postives = 70/122 (57.38%), Query Frame = 1 
Query:    1 QILKAYETLGDPNLRREYDRSGMKEEVRVMEEGTGPRYEDSPFGLFIRFGGGRGGMWFRYKGHGKRHAPDIVYSHQISFEEAFDGMVINVTVTRERLCKACGATGSSKPEEMPTCPLCQGKG 366
            ++ +AYE L D   RR YD+ G +     +++G G +   +PF +F +F GG G     + GH +R   D+  + +++ E+ + G  I + V+++ +C  C  TG+  P+++ TCP CQG+G
Sbjct:  448 ELAEAYEVLNDEEKRRIYDQYGEE----GLKQGGGQQGFHNPFDIFAQFFGGGG-----HFGHQERKGKDLQLALEVTLEDLYSGTTIEIDVSKQVICDHCRGTGAEDPDDIETCPTCQGRG 560
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BLAST of mRNA_H-paniculata_contig12297.1457.1 vs. uniprot
Match: A0A433DN51_9FUNG (Uncharacterized protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DN51_9FUNG)

HSP 1 Score: 77.8 bits (190), Expect = 1.140e-12
Identity = 43/122 (35.25%), Postives = 69/122 (56.56%), Query Frame = 1 
Query:    1 QILKAYETLGDPNLRREYDRSGMKEEVRVMEEGTGPRYEDSPFGLFIRFGGGRGGMWFRYKGHGKRHAPDIVYSHQISFEEAFDGMVINVTVTRERLCKACGATGSSKPEEMPTCPLCQGKG 366
            ++ +AYE L D + RR YD+ G +     +++G G  + D PF +F +F GG G      K   +R  PD++    ++ EE + G  I+V V+++  C  C  TG+  PE++ TCP+CQG G
Sbjct:   68 ELAEAYEVLVDEDKRRIYDQYGEE----GLKQGGGQNFHD-PFDIFGQFFGGGGHF---QKNQQERKGPDLLVDLDVTLEELYLGTDIDVDVSKQVYCDHCRGTGAKNPEDVKTCPVCQGSG 181
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BLAST of mRNA_H-paniculata_contig12297.1457.1 vs. uniprot
Match: A0A8H7UW06_9FUNG (Uncharacterized protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7UW06_9FUNG)

HSP 1 Score: 74.3 bits (181), Expect = 3.730e-11
Identity = 44/125 (35.20%), Postives = 70/125 (56.00%), Query Frame = 1 
Query:    1 QILKAYETLGDPNLRREYDRSGMK--EEVRVMEEGTGPRYEDSPFGLFIRF-GGGRGGMWFRYKGHGKRHAPDIVYSHQISFEEAFDGMVINVTVTRERLCKACGATGSSKPEEMPTCPLCQGKG 366
            +I  AYE L D   R  YDR G +  ++      G G  + D PF +F  F GGGR     +  GH ++  PDI+   Q++ E+ ++G+ I + V+++ LC  C  +G+ KPE++ TC  C+G+G
Sbjct:  967 EIANAYEVLMDDEKRSIYDRYGEEGLKQNGGQGRGGGGGFHD-PFDIFSHFFGGGR-----QNHGHQEKRGPDILIPLQVTLEDLYNGVDIQLDVSKQILCDHCHGSGARKPEDIHTCDQCEGRG 1085
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BLAST of mRNA_H-paniculata_contig12297.1457.1 vs. uniprot
Match: A0A8H6ZF79_9AGAR (DNAj-like protein subfamily a member 2-like protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6ZF79_9AGAR)

HSP 1 Score: 70.1 bits (170), Expect = 6.440e-10
Identity = 49/142 (34.51%), Postives = 72/142 (50.70%), Query Frame = 1 
Query:    1 QILKAYETLGDPNLRREYDRSGMKEEVRVMEEGTGPRYEDSPFGLFIRF-GGGRGGMWFRYK----GHGKRHAP--DIVYSHQISFEEAFDGMVINVTVTRERLCKAC---GATGSSKPEEMPTCPLCQGKGYAYHLSNSHH 396
            ++L AYETL DP LR  YD +G+     +   G G    D P  +F  F G G GGM F +     G  +R     D V  H ++ EE ++G  + + + +E +C  C   GA G++KP+E   C  C GKG+   +S+  H
Sbjct:   66 ELLAAYETLSDPQLRHIYDINGID---GLTGRGAGMGGVD-PADIFATFFGAGGGGMHFGFDFGGAGPSRRRGKGEDTVIPHTVTLEELYNGKTLKLNLEKEAVCTTCKGSGARGNAKPKE---CGTCDGKGWTTAISHGSH 200
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BLAST of mRNA_H-paniculata_contig12297.1457.1 vs. uniprot
Match: A0A7C1F9U3_9BACT (Chaperone protein DnaJ n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7C1F9U3_9BACT)

HSP 1 Score: 68.9 bits (167), Expect = 1.170e-9
Identity = 49/128 (38.28%), Postives = 61/128 (47.66%), Query Frame = 1 
Query:    1 QILKAYETLGDPNLRREYDRSGMKEEVRVMEEGTGPRYEDSPFGLFIRFGGGRGGMWF------RYKGHGKRHAPDIVYSHQISFEEAFDGMVINVTVTRERLCKACGATGSSKPEEMPTCPLCQGKG 366
            +I +AYE LGDP  R EYD+ G    V   E G G       F  F  F  G G   F      RY        PD+V +  I+ EEA+ G+   +T+TRE  C AC  TG+   E   TCP C+G G
Sbjct:   51 EINEAYEVLGDPKKRAEYDQFGR---VPPFEGGEG-------FEWFRPFDFGFGEDMFSDLFGRRYAEEPPLRGPDLVTALDITLEEAYKGVTKPITITREIPCSACNGTGA---ESFQTCPNCKGTG 165
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BLAST of mRNA_H-paniculata_contig12297.1457.1 vs. uniprot
Match: A0A1F9VJT4_9BACT (Chaperone protein DnaJ n=1 Tax=Elusimicrobia bacterium RIFOXYA12_FULL_49_49 TaxID=1797954 RepID=A0A1F9VJT4_9BACT)

HSP 1 Score: 68.2 bits (165), Expect = 2.340e-9
Identity = 46/133 (34.59%), Postives = 64/133 (48.12%), Query Frame = 1 
Query:    1 QILKAYETLGDPNLRREYDRSGMKEEVRVME----EGTGPRYEDSP-----FGLFIR--FGGGRGGMWFRYKGHGKRHAPDIVYSHQISFEEAFDGMVINVTVTRERLCKACGATGSSKPEEMPTCPLCQGKG 366
            +I +AYE +GDP  R +YDR G             EG GP + D       FG F    FG  RGG   R K        D+ Y  +ISF++A  G+ + + + ++ +C ACG TG+       TCP C+G G
Sbjct:   48 EINEAYEMIGDPTKRAQYDRFGHAGVGTAPPPKPGEGGGPGFGDFSSANDIFGDFFSDVFGAQRGGRSSRQK-----RGDDLRYDLEISFKDALTGIEVPLEIPKKDICTACGGTGARAGTTPKTCPQCKGVG 175
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BLAST of mRNA_H-paniculata_contig12297.1457.1 vs. uniprot
Match: G0R1A2_ICHMG (Uncharacterized protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R1A2_ICHMG)

HSP 1 Score: 67.0 bits (162), Expect = 5.640e-9
Identity = 40/125 (32.00%), Postives = 61/125 (48.80%), Query Frame = 1 
Query:    1 QILKAYETLGDPNLRREYDRSGMKEEVRVMEEGTGPRYEDSPF--GLFIRFGGGRGGMWFRYKGHGKRHAPDIVYSHQISFEEAFDGMVINVTVTRERLCKACGATGSSKPEEMPTCPLCQGKGY 369
            QI  AYE L D +LRR YD+ G +   R   +       D  F  G+F  F GG        K + ++  P++      S E+ + G  +   +T++ LC  C  TG++ P+++ TCP C G GY
Sbjct:   65 QINTAYEVLKDKDLRRAYDQEGEEGVKRYQAQKQQGNSPDMDFFGGIFGNFFGGGN------KRNVEKRGPELKIKLYTSLEDIYSGNEVPFFITKQVLCPHCRGTGANDPDDVKTCPACNGGGY 183
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BLAST of mRNA_H-paniculata_contig12297.1457.1 vs. uniprot
Match: A0A7S1CN60_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CN60_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.140e-8
Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 1 
Query:  583 FVHVVNTTCKVCGGMGRISDGRCPICGGRKVHLEAETMEVSIPPGAPFGHTVTLNGKAHQYPGKVDGALRVVAILLPHPRF 825
            + HV+NTTC+ C G G +    CP+CGGR+V +EA+ + +++P G   G  +T+  +  +  G   G L +    LPH +F
Sbjct:  108 YKHVINTTCEWCEGTGHVVVEPCPVCGGRRVTVEAQPLNITVPAGTRDGAQITMPAQGTERLGYNPGDLVLQVRYLPHAKF 188
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12297.1457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHS6_ECTSI1.540e-8552.28Heat shock protein 40 n=1 Tax=Ectocarpus siliculos... [more]
A0A7S2SQR9_9STRA5.870e-1630.54Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A261Y2A0_9FUNG5.090e-1331.97Cysteine dioxygenase n=1 Tax=Bifiguratus adelaidae... [more]
A0A433DN51_9FUNG1.140e-1235.25Uncharacterized protein n=2 Tax=Jimgerdemannia fla... [more]
A0A8H7UW06_9FUNG3.730e-1135.20Uncharacterized protein n=1 Tax=Mucor plumbeus Tax... [more]
A0A8H6ZF79_9AGAR6.440e-1034.51DNAj-like protein subfamily a member 2-like protei... [more]
A0A7C1F9U3_9BACT1.170e-938.28Chaperone protein DnaJ n=1 Tax=Nitrospirae bacteri... [more]
A0A1F9VJT4_9BACT2.340e-934.59Chaperone protein DnaJ n=1 Tax=Elusimicrobia bacte... [more]
G0R1A2_ICHMG5.640e-932.00Uncharacterized protein n=1 Tax=Ichthyophthirius m... [more]
A0A7S1CN60_9STRA1.140e-835.80Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12297contigH-paniculata_contig12297:378..7595 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.9
Seed ortholog evalue1e-18
Seed eggNOG ortholog529818.AMSG_00833T0
Preferred nameSCJ1
KEGG koko:K03686,ko:K14002
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005829,GO:0006457,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006986,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0019538,GO:0019941,GO:0030163,GO:0030433,GO:0030544,GO:0031072,GO:0031974,GO:0033554,GO:0034620,GO:0034975,GO:0034976,GO:0035966,GO:0035967,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051087,GO:0051603,GO:0051716,GO:0070013,GO:0070887,GO:0071310,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901698
EggNOG free text desc.heat shock protein binding
EggNOG OGsCOG0484@1,KOG0712@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko03110
Exons7
Model size864
Cds size864
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928951.7225082-CDS-H-paniculata_contig12297:377..5421622928951.7225082-CDS-H-paniculata_contig12297:377..542Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 378..542 -
1691480679.305436-CDS-H-paniculata_contig12297:377..5421691480679.305436-CDS-H-paniculata_contig12297:377..542Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 378..542 -
1622928951.7388325-CDS-H-paniculata_contig12297:928..10151622928951.7388325-CDS-H-paniculata_contig12297:928..1015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 929..1015 -
1691480679.3185022-CDS-H-paniculata_contig12297:928..10151691480679.3185022-CDS-H-paniculata_contig12297:928..1015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 929..1015 -
1622928951.7952213-CDS-H-paniculata_contig12297:2731..29631622928951.7952213-CDS-H-paniculata_contig12297:2731..2963Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 2732..2963 -
1691480679.3274143-CDS-H-paniculata_contig12297:2731..29631691480679.3274143-CDS-H-paniculata_contig12297:2731..2963Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 2732..2963 -
1622928951.8163981-CDS-H-paniculata_contig12297:3068..31061622928951.8163981-CDS-H-paniculata_contig12297:3068..3106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 3069..3106 -
1691480679.3374677-CDS-H-paniculata_contig12297:3068..31061691480679.3374677-CDS-H-paniculata_contig12297:3068..3106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 3069..3106 -
1622928951.8352413-CDS-H-paniculata_contig12297:3998..41511622928951.8352413-CDS-H-paniculata_contig12297:3998..4151Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 3999..4151 -
1691480679.3499892-CDS-H-paniculata_contig12297:3998..41511691480679.3499892-CDS-H-paniculata_contig12297:3998..4151Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 3999..4151 -
1622928951.8574252-CDS-H-paniculata_contig12297:4338..44521622928951.8574252-CDS-H-paniculata_contig12297:4338..4452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 4339..4452 -
1691480679.3621545-CDS-H-paniculata_contig12297:4338..44521691480679.3621545-CDS-H-paniculata_contig12297:4338..4452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 4339..4452 -
1622928951.8686144-CDS-H-paniculata_contig12297:7520..75951622928951.8686144-CDS-H-paniculata_contig12297:7520..7595Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 7521..7595 -
1691480679.374714-CDS-H-paniculata_contig12297:7520..75951691480679.374714-CDS-H-paniculata_contig12297:7520..7595Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12297 7521..7595 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12297.1457.1prot_H-paniculata_contig12297.1457.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12297 378..7595 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12297.1457.1

>prot_H-paniculata_contig12297.1457.1 ID=prot_H-paniculata_contig12297.1457.1|Name=mRNA_H-paniculata_contig12297.1457.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=288bp
QILKAYETLGDPNLRREYDRSGMKEEVRVMEEGTGPRYEDSPFGLFIRFG
GGRGGMWFRYKGHGKRHAPDIVYSHQISFEEAFDGMVINVTVTRERLCKA
CGATGSSKPEEMPTCPLCQGKGYAYHLSNSHHNQHQHYHHRHHTHGDNGE
QGSTNRRHRCSAAEGDICGGCGDGGGRDETATQEDEDSEESIPEFVHVVN
TTCKVCGGMGRISDGRCPICGGRKVHLEAETMEVSIPPGAPFGHTVTLNG
KAHQYPGKVDGALRVVAILLPHPRFERQGIRLKDKTL*
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mRNA from alignment at H-paniculata_contig12297:378..7595-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12297.1457.1 ID=mRNA_H-paniculata_contig12297.1457.1|Name=mRNA_H-paniculata_contig12297.1457.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7218bp|location=Sequence derived from alignment at H-paniculata_contig12297:378..7595- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATATTGAAGGCTTACGAGACCCTAGGAGATCCCAATTTGCGCCGAGA
ATACGACCGAAGCGGCATGAAAGAGGTAAGCGAGCGTTTTTCCTTACACA
CGCAATTGTACTGACCGGGGGTTTGTCAATCGTAGGCCCTGCCTACCCTT
TCCTTATTTTCCTTGCGGCATATCGCAAATACACAATAGAGGGGCAGTAC
TAATCGCGGCTGCCTGTAGCTCGTGGGTCCCTGTAGCACTGAGTGATTTA
TTTTCTCGTCTTACTCGCCTTTTCTTAATCGTATCTCCATGCTGTGGCTG
ACGGGGTCAACATCGTACATTAAGCAGTGTTTGTTCGCCGTGATGGCGCG
TGCGGTAGAGCCCTCGTACGATTTCGAGACGTGGACAATTGGATCAAATT
TCAAGTCCAAGATATGGGGTCGCCGAGAACGGATTTTGCGCAGCCACTGC
TACATAGCCGAGATAAATCGTAAAGAACGATTGACAATGACGGAGTGCAT
TGATCGTATACGCATGCAAGACGCATGTCCGCTGAGCCTCTCAAATCGGA
GCGTGTGTTTGTTGAAATACATTGGCTAATAGTGCCTGTGTGGTGCTGTT
AAAGTAGCGAACACCGGAACATAGTCACAAGCAAAAAGGCAAGTGCGCGC
AAAGGGGCGCTGGAGCTCGACGGAAGACCTCCTCGGTGTTCGCCAAAAAG
TTAATGCTTGCGAGGCACAAACCAATACTGTTGTTCGTAGATGTTTCTCT
TACTATTGAGCCTTGAAGGTCGTTCCCGAGAGTGGAAACTGAGCAGAGTG
ATCGCATTTGTGCGGGATTTCCTCCAGGAATTATTACCCCGCAGATTGAC
CCGACTTTCTAACGTAAAAAGGAAACCAAAATCTTTCCTCTTAGGGTAAT
ACACCCGTTCTGCTGATGATTCGTTAAAAACATGCGTTGCAGTATTTCGT
CTAACAGTGATCAACAACTCGCTGTCAAAACTGTACTTAACAGCAGCTTA
CTGAACTATCCTCATTGCTCCGCAATCAGACAACGTTCATGCTCCCTCTG
CCTCATAAGTGTGCGTGCTTATGGTTGAACGGTCATACCTTTTTTAGGAT
TTAGGGTTTCATCAACGCAAAGGATATCATTCGAAAGCCCACCACCTCGG
TTTGCATTGATATATATATATATATATATACAGCACAATTTCACGGCGAA
AATGGTCGAGAAATCGCACTCTCGACTTCATGTTATTTTCTCGAAACGTG
TTTTGCTTGCAACAAAATCTACATAATAGGTCAAGACAGCTGGAAACGAT
GGTTAATCGATGATAACGTCTCAACGAGATCTCCGATGGAGAAACTAATT
GCCGCGTTAGATTTCGTGACAAAATTTGGACGAAAGTCCATGATTATCTT
TTCATCAATCCCAAATGTTGTCCTCCACGTTATGACATCCAGGTGGGGCA
CACGAGATACAGCAAAAATTCATGTTTTCCTTGTTGGTGACAAATTGATC
AACACATATTTCATGCGGCGCTCGAGTGATGGTGTGACGTGAGGAAGCGA
CATCTAACTCAATAATCGGTTTCACCTTTAGTCTAACGTTTATCAAGGAA
TCTCCAAGGCAGCAATTCGTTTCTTCATATGATGTCTCGTTGAGACGTTA
TCATCGATTAACCATCGTTTCCTGTTGTCTTGGCCGATGTAGCTTTTGTT
GGAAGCAAAACACGTTTCGAGACAAAAAACAGGAAGTCGAGAGTGCGGTT
TCTCAACCATATCGCAGTCAAATCGTGCTTTGTAGATGTCTATATGCAAA
CCGAGATCGTGGGCTTCGGAGCTATATCCTCTGCTTTTTGTAAAGTCCAA
ATGAAAAAAAGGTGTGACCGTTCAACCGTAAGCACACAAACTTACGAGAC
AAAGGGAGTACATGTACTCTTCCCCAAAGAACGATCCTCAGTATATTATC
TCCGAATCCGTCTCCAAGAATATTTATGCCTTAAATATGGGGTCTTGATG
GTCTGGATCGGTCGTGTGTAGCTGTCGCTCCTTGTCCATAGTGCAGCCAC
CACTCGTCACTTGTTCATCGTTATACTAGAGTGCAAGAGAGTAGTGTACT
TTGTAATCTACGTACTTACTGATTATCTGCATTCACTTCATCCGTGTTCA
TAAGGAAGCATAGTTCCAAGTGAGCGCCTCAAGAACCAGAGCCCCACAAG
CATGACTAATAAAAAAATCAATAAGAATTGTCAAGGCTCATGCTTTAGTC
CGAGTCGCCATTTTCAAGAACTCTGAAAGGTTCAACACTTCGAAAAGAGG
CAAATCCAGACCCGCAGTCCAAACAATTGCCTCTTTGGAAACGTCCCATC
TATTCGAAAATGTCTAATATCTTTGAAAACGACGAATCTGTGGAAGCTCT
TAACCCCTATCGCGCTATTAATTTTAGATGTTCAGTGCGGGAGCTATCGC
GTAATATGGATCAAGTTATGTCAAGATTTCAGTCATGGATAAGAACCATA
GATGGACGATGACGAATTGGATCGCTGCGGGTTAAACATATCGATGTCGG
GTAGCACGGGGCCCAGTGGAATCGTTTACACCTTACACGATGATATATGT
TCCCAACGGTTACTTGGCAGGTAGTCGAACGGGGTTGTCTGCTCTCGATT
GAATACCACGGCGTTCATTTCGTTTGCAACTCGCTAGAGCAGGTCGCTAG
GAAAAGAACAGTTCGGCGTCTTCTCTGCAAGGCGTTGACAACCTGGGGAT
GTCCCTAGAAACTCCCTGTCTCAATTGAACAGCTAGCAGCCTAGAATCTA
GTGCCTTAAAACAGAATCATGTACGAACCGCTACGACCTCTCCTTGAAAC
TTGTCAAAAATCTATGCTCGATGTAGCCGTTGCAAAACACGCCCTTCCGA
ACGTTACATTAATGTATACCATCGGTATTTTCGCAGCCAAGATTGCATCG
AGCAACCGAGCGACGGCATTGTGCTGTGTCTCGGTCCTCCGAACCGGATA
ACACCATCTCTAGTGTTCAACTTCAGACCACGCTATTCTCGTCCTTTTCT
TGAATTACACACCTCATCATTGTTGTCATCCCTCCTTCATCACACTTGCT
GGCAACTCATACCAGTAATTCCTTACCCCTGTGGCCAGAATAGGAAGTAC
GCGTCATGGAGGAAGGCACTGGACCCCGCTACGAAGACTCTCCTTTCGGA
TTGTTCATCCGCTTCGGTGGTGGCCGGGGAGGCATGTGGTTTCGGTATAA
AGGTCATGTGAGAGCGCACCGCATGTATTTAGCGGAATGTCGTAGCATGC
ATAACCCTAGTTGGAAAAAACACTCACTGGCATCTGCCTTCTCACACAAC
ATCTGAAAAATACGCTTTGCTGATCTATCAACTACTGTTTCGCCACACCT
ATTCCTATTCCGAAACAAGATTCTACTCTTTCTGCTTGGTGTAGGGAAAG
CGACATGCTCCGGATATAGTATACTCTCACCAAATCAGCTTCGAGGAGGC
CTTCGACGGCATGGTGATAAATGTCACCGTCACTCGGGAGAGGCTATGCA
AAGCCTGCGGCGCTACCGGCAGTTCCAAGCCCGAGGAGATGCCGACGGTA
AGAAGCTAGCCTCAACCTCTGACCCTATCCTAGAGATGTCCACCGATCAG
CGGGGCGCCACTAGGGTACTATACCCGAAATAAATCCCGAGGAAAGGGAT
ACTGCTCCCCCCCCTGCAATTGCGAACATAACTCTTTGGTGGTTCTAGGA
GATGGAAATTGACTTCAGAAGGCTAGGGTTGAGGTACATGGGATAGGTCC
AACAATTTTGGGCCATATTTGGCAATGTAGGAAAAAGTGATGGCGATCAG
AAACCGCTCCGGTAGGAACGAAGCTCCGTCCTCTCGGGGATGCGTGGTCA
ATGGTATAGCTGCGGCGTGCAAAATATGACCATGTCCCTCCCTGGCGGGG
ATGCTTATATACCACCATATATCCAACAATGCAGGGCAAAACACTTTGCG
AGGGTGCTGTACCAGTTGTTCAGGTCGACCTGCAGTATCTACCCCTAATA
GTGTCCGCCTTCGCAAGCTCCAGTGTGTACTTTGTCATTTTCATCTCGCG
GGGGATACAGTTACATTTTTAGTCCCTTGTGGATGAATAGCCCACTTGTT
GTTGCTTCAGTTCCAAGGCCAATGGGTACTGTCGCGCCATGAGTCCGGGT
AATTGCCCGTGACCGGAGTGAGCTGGAGACCACACCCACGAAAGAGATGC
AGTTAGAATTCATCTGTGAAGCAGCACACTCCAAGGCGTGGAAGCTGGTG
CAACCCCTTTGCTTTTTCTCACTGTATTGATGAGTAGCACGATTGTAGGC
AAACCGACCTCAGCATATATTTGTGTTAATATTATTATACGTAGAGCCAA
AGCAGTGTACCCCACTTACCCCCCACCCCCCCCACCACCTCCACCCCCGT
TCACGTGCGCCCATTCCTCTTTCATCAAACCAACAAAAGTGCCCTCTGTG
CCAGGGAAAGGGCTACGCGTATCACCTGTTTGGCGAGGAATCAGAAGAAC
CCAATGAGCGCTCTAACGCTGCTGACAAAACGCGATGTAGTAGTAGTAGT
AGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAATAGTCACCACAA
TCAGCACCAGCACTATCATCATCGTCATCATACCCATGGTGATAATGGCG
AGCAGGGTAGTACAAATCGTCGCCACCGTTGTTCAGCAGCAGAAGGAGAT
ATCTGTGGAGGATGCGGGGACGGGGGGGGTAGGGACGAGACGGCAACGCA
GGAAGACGAAGACTCGGAAGAATCTATTCCCGAATTCGTGCATGTGGTCA
ACACTACGTGTAAGGTACGAGTGGGCGTAAGTGTGCATTTTTCATCACAA
GTGTTCAGGGGGATAATATGTGATAAAAGGAAGATGGCGATTTCCATTCG
CCTTACGTTAGCAAGGTTCGTCTGCATCAGCAGTTCAGAACTGCCGAATA
AGATATTGGCGAGGTGGGAAGTAGTGCAGTCGAGTAGAGACACAAGCAGA
GAGTACCGGTAGCAGTAGATTGTAGTCATTTTTCTAAATCGTAAATAACG
TGTACATACATAGAAGACATCCACCCAAAGATCCTCGAGTAAAGCTGTTG
TTCATCCCGCGAGGCAGTCACTCACAAGAGAAGGAACGCAGCGAAGCGGA
AGCTTTGCGCGCAGTGCTCAGTAGTGCTAATTCCTTGACAATTCCCCGCA
ATACAAGACAAACAACAGTGCGTACTCTTGGCTTAGTGCCTAGAATTCGG
ATTTAGGTGGTGTCCAGATGGAGGGGTGCTCGATCAAAAGGTTTCCTATT
ACCTAACAATCCTGTTTTCCCTTACCCCAGATTGAATAGCCCTATTTTCG
ATTGAAGCTATCTGTAATTTTAACCTGTCCCTATGTTTCAATCGCGCATG
CGCCCCAATCTGCGCCGACGACACCCTACAGTCGGTCATTTCTATTGTGT
CCCCGGTGGACCCGACGTGACGAGAATAATACAGGGGTCCGATCCGTCTA
AGTCTGTTTAGAATTACACCTAAGCGTGAATTTTAGCGTTCTCAAACTGT
ATGCATCCATCGTCTATTCAATTACCATAAGACAGCCCTTTGATAGTAAC
TGAAAAATGGTGGTCGGTACACCCATCTTCACTATTATGTCATGGACCAG
CCCCACGCTCCTTGTTCACCAACAACGTGGGTCAATCATCCTCCAACAAA
CATGCCTCCCAGTTCCATTACACACATGAACTTGATGGGTAGACCCTTGT
GTCATATTGCTCTCTGCCGTTTGCTCAAAGGCGCCTGGCACACATACCCA
GTTAACCGAGATATTTAACAAAGTTCCTTGTGATCTTCGATTGAAGAAAG
AACCCGCAGGGAGGGCACTTTGCTTGGTGGCATATTTTTCGTCGGTCCCT
CGGTGGGAAAATATTCTCAGAGAAGCAGTGAAATGAAAACGCCCTGTGTA
TATTTTCGCTGTCTTGCAACGTTGCGCATGCTTGGATACGAGTTTTTGGG
AGCGACACAGGTGCTTTGCAATCTGTTGCTCTAACCAAGGTACGAATTAA
AACAAGTAGAGTTCTAGAGCTCCATTGGGCTATACCAAAAGAGCATTGCA
CCGCGCTTAAACACCAGAAAAACGTTACTGCTACTACATATACCATACGC
ATTTTGACAATTCTTCGCAAATGTCCGCTGATTAACGGAGTACCGGGTGA
CCTCTCTCGCTGATTCGTCGACACTCTGCAGAAACTGGCGAACAGCTGCT
CTGGTTGGTCGACAGCATTTGATTTTGTGTATTTAGGTGGATGAGCATTT
GATTTTACATTGCGCAGGCATTTGGTAGCGTGGTGTAAGAGAGTGACATG
CTGTCCCAGCCGTTGATTGGATGTGCCCCTTCGCTGTTTTTATGCCGAAC
GGGTAAATGTCCTCAGTTGATTGCCCACACATCTTCATTGTGTTTAAGCC
GAACGGGAAAATGTGCCCTCCATTGATTGACCGCACGTCTTCGGTGCTAT
TACTCCGAATGAGCTCATATGCGTGTCCAGGTGTGTGGCGGGATGGGGCG
TATATCAGACGGACGCTGTCCCATTTGTGGGGGAAGGAAGGTCCATCTGG
AAGCTGAAACAATGGAGGTGAGTACAACTAGCTGTTAATTCCCCGATTTA
GGCCTGCAACATTTGAGGTGAAAAAACTCAGTTCAGCGATGGCGAAGGGA
TTAGGACAAAGTATGAGACCCGGAGAAGTCCCCCGAGGGAAGGGATAGCA
TAGGTTATCTCTTCCCCCCTCCCCCTCCCCAGAGACTTTATTTTACTGTC
CCCTATCCAACATTGTAGAATATTACTCTGTCACGGTATTATACCAGATA
ATGAGATGGATGAAACCTATAGAGGGGATGCTAAAACAGATATATCCAGG
GTCAATGCTGACTCTCCTCCATTGTTAAATAACGTTCGAACTAATTCGAA
TAAATTCGAACAAATTCGGGACAATGCGGACCAATTCGGGAAATTTTGGG
CAGGTGTCCATTCCGCCGGGAGCGCCATTTGGCCACACTGTAACTCTCAA
CGGCAAGGCGCATCAGTACCCAGGGAAAGTGGATGGAGCCCTTCGTGTGG
TGGCTATTTTGCTCCCACATCCTAGGTTTGAGCGTCAAGGTATTCGTTTA
AAAGATAAGACACTCTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig12297:378..7595-

>mRNA_H-paniculata_contig12297.1457.1 ID=mRNA_H-paniculata_contig12297.1457.1|Name=mRNA_H-paniculata_contig12297.1457.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1728bp|location=Sequence derived from alignment at H-paniculata_contig12297:378..7595- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATATTGAAGGCTTACGAGACCCTAGGAGATCCCAATTTGCGCCGAGA
ATACGACCGAAGCGGCATGAAAGAGCAGATATTGAAGGCTTACGAGACCC
TAGGAGATCCCAATTTGCGCCGAGAATACGACCGAAGCGGCATGAAAGAG
GAAGTACGCGTCATGGAGGAAGGCACTGGACCCCGCTACGAAGACTCTCC
TTTCGGATTGTTCATCCGCTTCGGTGGTGGCCGGGGAGGCATGTGGTTTC
GGTATAAAGGTCATGAAGTACGCGTCATGGAGGAAGGCACTGGACCCCGC
TACGAAGACTCTCCTTTCGGATTGTTCATCCGCTTCGGTGGTGGCCGGGG
AGGCATGTGGTTTCGGTATAAAGGTCATGGAAAGCGACATGCTCCGGATA
TAGTATACTCTCACCAAATCAGCTTCGAGGAGGCCTTCGACGGCATGGTG
ATAAATGTCACCGTCACTCGGGAGAGGCTATGCAAAGCCTGCGGCGCTAC
CGGCAGTTCCAAGCCCGAGGAGATGCCGACGGGAAAGCGACATGCTCCGG
ATATAGTATACTCTCACCAAATCAGCTTCGAGGAGGCCTTCGACGGCATG
GTGATAAATGTCACCGTCACTCGGGAGAGGCTATGCAAAGCCTGCGGCGC
TACCGGCAGTTCCAAGCCCGAGGAGATGCCGACGTGCCCTCTGTGCCAGG
GAAAGGGCTACGCGTATCACCTTGCCCTCTGTGCCAGGGAAAGGGCTACG
CGTATCACCTTAGTAATAGTCACCACAATCAGCACCAGCACTATCATCAT
CGTCATCATACCCATGGTGATAATGGCGAGCAGGGTAGTACAAATCGTCG
CCACCGTTGTTCAGCAGCAGAAGGAGATATCTGTGGAGGATGCGGGGACG
GGGGGGGTAGGGACGAGACGGCAACGCAGGAAGACGAAGACTCGGAAGAA
TCTATTCCCGAATTCGTGCATGTGGTCAACACTACGTGTAAGTAGTAATA
GTCACCACAATCAGCACCAGCACTATCATCATCGTCATCATACCCATGGT
GATAATGGCGAGCAGGGTAGTACAAATCGTCGCCACCGTTGTTCAGCAGC
AGAAGGAGATATCTGTGGAGGATGCGGGGACGGGGGGGGTAGGGACGAGA
CGGCAACGCAGGAAGACGAAGACTCGGAAGAATCTATTCCCGAATTCGTG
CATGTGGTCAACACTACGTGTAAGGTGTGTGGCGGGATGGGGCGTATATC
AGACGGACGCTGTCCCATTTGTGGGGGAAGGAAGGTCCATCTGGAAGCTG
AAACAATGGAGGTGTGTGGCGGGATGGGGCGTATATCAGACGGACGCTGT
CCCATTTGTGGGGGAAGGAAGGTCCATCTGGAAGCTGAAACAATGGAGGT
GTCCATTCCGCCGGGAGCGCCATTTGGCCACACTGTAACTCTCAACGGCA
AGGCGCATCAGTACCCAGGGAAAGTGGATGGAGCCCTTCGTGTGGTGGCT
ATTTTGCTCCCACATCCTAGGTTTGAGCGTCAAGGTATTCGTTTAAAAGA
TAAGACACTCTGAGTGTCCATTCCGCCGGGAGCGCCATTTGGCCACACTG
TAACTCTCAACGGCAAGGCGCATCAGTACCCAGGGAAAGTGGATGGAGCC
CTTCGTGTGGTGGCTATTTTGCTCCCACATCCTAGGTTTGAGCGTCAAGG
TATTCGTTTAAAAGATAAGACACTCTGA
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