mRNA_H-paniculata_contig12276.1449.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12276.1449.1 vs. uniprot
Match: A0A6H5K572_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K572_9PHAE) HSP 1 Score: 541 bits (1395), Expect = 4.880e-175 Identity = 292/381 (76.64%), Postives = 313/381 (82.15%), Query Frame = 1 Query: 1 GGGIDRRQHPMGVVCTCVRTGWSLMSSLFCVGEEWAEGHAGRLMELWASCMRGAEDG--PAATRLRGLEPAHELILLDASTRALLWFLRSCPNTLCMEPGRMALAIVLMESAVEAVEGRLKSPVKKQGVICRTLLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELLNPDDTVLSVASTAKASIGIVPTMSGVGSVVEGEDLDTVLAQVTLVSGVTIGPQERDAMVCSADPWAGRGPSPARRRRAEENIPPTPKHASVFASGTAAS-SFPTSAVGGGSSGGDNGLAAGGWRRPLPSSASINVRLLDAAVQVFAASFGQQSEESKLEGISGLMHTLPEHVQAAA-AXXXLAASRGGAKKDASFIMP 1131 GGG R Q PMGVVC+CVRTGWSLMSSLFCVGEEWAEG A RLM+LWASCMRGA G PA LRGL+ AHELILLDASTRALLWFLRSCPNTLCM P R+ALA+ LMESAV+AVEGRLKSP KKQGVICRTLLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELL+PDD VLSVAS+AK VPTMSGVGS+VE ED D VLAQV LVSGVTIGPQERDAMVCSA+ WAGRGPSPAR+RR ENIPPTP HAS+ S F T+A G WRRPLPSSASINVRLLDAAVQVFAASFGQQ+EESKLEG+SGL+ LPE++QA A A ++S G+KKDASF MP Sbjct: 1110 GGGAGRGQQPMGVVCSCVRTGWSLMSSLFCVGEEWAEGKAERLMKLWASCMRGAGAGTLPAVANLRGLDTAHELILLDASTRALLWFLRSCPNTLCMAPDRLALALSLMESAVDAVEGRLKSPTKKQGVICRTLLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELLHPDDAVLSVASSAK-----VPTMSGVGSLVEAEDSDRVLAQVALVSGVTIGPQERDAMVCSAEVWAGRGPSPARKRRELENIPPTPLHASLVGENPHTSVGFSTAA----------GXXXXXWRRPLPSSASINVRLLDAAVQVFAASFGQQTEESKLEGVSGLVEALPEYLQAKARASAGASSSSRGSKKDASFSMP 1475
BLAST of mRNA_H-paniculata_contig12276.1449.1 vs. uniprot
Match: D7FJ52_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ52_ECTSI) HSP 1 Score: 450 bits (1157), Expect = 7.680e-144 Identity = 261/384 (67.97%), Postives = 282/384 (73.44%), Query Frame = 1 Query: 1 GGGIDRRQHPMGVVCTCVRTGWSLMSSLFCVGEEWAEGHAGRLMELWASCMRGAEDG--PAATRLRG-------------LEPAHELILLDASTRALLWFLRSCPNTLCMEPGRMALAIVLMESAVEAVEGRLKSPVKKQGVICRTLLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELLNPDDTVLSVASTAKASIGIVPTMSGVGSVVEGEDLDTVLAQVTLVSGVTIGPQ---ERDAMVCSADPWAGRGPSPARR-----RRAEENIP----PTPKHAS---VFASGTAASSFPTSAVGGGSSGGDNGLAAGGWRRPLPSSASINVRLLDAAVQVFAASFGQQSEESKLEGISGLMHTLPEHVQA 1062 GGG R Q PMGVVC+CVRTGWSLMSSLFCVGEEWAEG A RLMELWASCMRGA G PA LRG L+ AHELILLDASTRALLWFLRSCPNTLCM P R+ALA+ LMESAV+AVEGRLKSP KKQGVICRTLLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELL+PDD VLSVAS+AK VPTMSGVGS+VE ED D VLAQV LVSGVTIGPQ +R +C P A S R R ++P P H S ++ +G F T+A G WRRPLPSSASINVRLLDAAVQVFAASFGQQ+EESKLEG+SGL+ LPE++QA Sbjct: 829 GGGGGRGQQPMGVVCSCVRTGWSLMSSLFCVGEEWAEGKAERLMELWASCMRGAGAGTVPAVANLRGSLIRSSKKGRRWGLDTAHELILLDASTRALLWFLRSCPNTLCMAPDRLALALSLMESAVDAVEGRLKSPTKKQGVICRTLLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELLHPDDAVLSVASSAK-----VPTMSGVGSLVEAEDSDRVLAQVALVSGVTIGPQGEGQRVRFLCIRTPAAFVCSSVYIRDLYMFNRESSDLPTVLTPGSHHRSPTNIYPAG-----FSTAA----------GXXXXXWRRPLPSSASINVRLLDAAVQVFAASFGQQTEESKLEGVSGLVEALPEYLQA 1192
BLAST of mRNA_H-paniculata_contig12276.1449.1 vs. uniprot
Match: A0A835Z1V0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V0_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.660e-49 Identity = 149/460 (32.39%), Postives = 196/460 (42.61%), Query Frame = 1 Query: 31 MGVVCTCVRTGWSLMSSLFCV-GEEWAEGHAGRLMELWASCMRGAEDGPAATRLRGLEPAHELILLDASTRALLWFLRSCPNTLCMEPGRMALAIVLMESAVEAVEGRLKSPVKKQGVICRTLLKALLMECFAWLPP-----------------GSFPG---------------SSTRLFKWSLDHLKM---------------------YTLNDVQSSLLPELLNPD------------------------------------DTVLSVASTAKASIGIVPTMSGVGSVVEGEDLDTVLAQVTLVSGVTIGPQ---------------------------ERDAMVCSADPWAGRGPSPARRRRAEENI---PPTPKHASVFASGTAASSFPTSAVGGGSSGGDNGLAAGGWRRPLPSSASINVRLLDAAVQVFAASFGQQSEESKLEGISGLMHTLPE 1050 MG+ CT VRTGW LMS+LFC G WAE H+ L+ LW A +G AA L GLE HELI LDA+ RALL ++R+CP L P + + ++E+A AVEGRLKSP K QG+ICRTLLK +L+ECFAWL P G+ G + R+ L H+ Y +N +++SLLP + NP D++L V+ + VP G+G EG+D LA LV+G+ IG Q ER+AM SA WAGR R +E + PPTP H + W RP SS+SINVRLLD A+ VFAA+FG Q EE++ + ++ LP+ Sbjct: 775 MGMACTSVRTGWGLMSALFCRDGGAWAEAHSDDLLMLWERAAAAAIEGQAAA-LPGLEQTHELIFLDAAVRALLCYMRTCPMALYNVPDALRRCVAVLEAAASAVEGRLKSPSKTQGIICRTLLKVMLVECFAWLSPYLMYTEHCCSCSPVLRAGNADGVLCVAAAGLLPRDVRAHVRVGPGPLPHVHGQRRRGIAAASDAQPQHMMHVDYMVNGIEASLLPAMPNPSVNCRSYKCHAGLRRTRCTYXXXXXXXXXXXXXXXXSDSMLEVSGACR-----VPPYQGIGVPFEGDDSADALAMHALVAGIPIGHQMLHPDEXXXXXXXXXXXXXXXXXXXXXEREAMAASASIWAGR--EHTAREAGDEGLSGEPPTPLHGAH------------------------------WCRPPASSSSINVRLLDGAICVFAATFGYQGEETQAMAMEAVVALLPD 1196
BLAST of mRNA_H-paniculata_contig12276.1449.1 vs. uniprot
Match: A0A7S1XLB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLB4_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.930e-27 Identity = 71/190 (37.37%), Postives = 101/190 (53.16%), Query Frame = 1 Query: 4 GGIDRRQHPMGVVCTCVRTGWSLMSSLFCVGEEWAEGHAGRLMELWASCMRGAEDGPAATRLRGLEPAHELILLDASTRALLWFLRSCPNTLCMEPGRMALAIVLMESAVEAVE-GRLKSPVKKQGVICRTLLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELLNPDDTVLSV 570 G DR P VVCTCVR GW+L++SL GE WA H L W + + HEL+ +DAS +LL ++ C L P + I L+E +++V GRL +P QG + L++A +ME FAWLPPG FP S+ LF W +++++ T V S++L LL+P D VL + Sbjct: 659 GARDRLPSP--VVCTCVRAGWALVASLMRQGETWAGAHLHLLWPRWRGAFTTDAETLPDAKAEDAFVTHELVCVDASVGSLLALVKFCTRALYTVPNALGNVIELLEMVLQSVRSGRLAAPKTTQGHVRLALVRAQVMEAFAWLPPGCFPMSADMLFDWCIEYVRGLTNRLVPSAILGSLLDPTDDVLEL 846
BLAST of mRNA_H-paniculata_contig12276.1449.1 vs. uniprot
Match: A0A7S4MYT1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MYT1_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.710e-26 Identity = 101/357 (28.29%), Postives = 149/357 (41.74%), Query Frame = 1 Query: 34 GVVCTCVRTGWSLMSSLFCVGEEWAEGHAGRLMELWASCMRGAEDGPAATRLRGLEPAHELILLDASTRALLWFLRSCPNTLCMEPGRMALAIVLMESAVEAVE--GRLKSPVKKQGVICRT-LLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELLNPDDTVLSVASTAKASIGIVPTMSGVGSVVEGEDLDTVLAQVTLVSGVTIGPQERDAMVCSADPWAGRGPSPAR-------------RRRAEENIPPTPKHASVFASGTAASSFPTSAVGGGSSGGDNGLAAGGWRRPLPSSASINVRLLDAAVQVFAASFGQQSEESKLEGISGLMHTLPEHV 1056 GVVCTCVR G+ ++S +G + H + LW R AE+G + PAH+L +DA +++ FL+SCP+ L P + +L+E + GRL + R KA LME FAWLPPGSF ++ R+F ++ H+K T N+ S++ L+ +D +L + S ++A V GV S+ + V L S + M A W + S A + + PTP H G WR+P S++ VRLLDAA+ FAA+FG Q S+ + L P V Sbjct: 530 GVVCTCVRAGYCMISGALTLGPDAVASHIASIFRLWHRSGRHAEEGT-----KYFAPAHDLACMDAMLASVVTFLKSCPDLLLAVPDALNRTTLLLEKVFPVISPGGRLGAEPDNPTAASRLESTKASLMETFAWLPPGSFAFAADRVFSFATSHIKRGTENETACSIISSLVTSEDKILDLHSLSRAEA--VGQTGGVRSLEDN--------LVALTSEAAHHSERESVMHFLA--WRKKNRSEAFSTNIFSSPILDLCQTEEDRTETPTPLHG-----------------------------VGTWRQPASPSSASQVRLLDAAIHSFAATFGMQDGRSQEAAMRMLASMFPASV 840
BLAST of mRNA_H-paniculata_contig12276.1449.1 vs. uniprot
Match: A0A7S3L636_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L636_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.550e-22 Identity = 90/341 (26.39%), Postives = 155/341 (45.45%), Query Frame = 1 Query: 43 CTCVRTGWSLMSSLFCVGEEWAEGHAGRLMELWASCMRGAEDGPAATRLRGLEPAHELILLDASTRALLWFLRSCPNTLCMEPGRMALAIVLMESAVEAV--EGRLKSPVKKQGVICRT-LLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELLNPDDTVLSVASTAKASIGIVPTMSGVGSVVEGEDLDTVLAQVTLVSGVTIGPQERDAMVCSADP-WAGRGPSPARRRRAEENIPPTPKHASVFASGTAASSFPTSAVGGGSSGGDNGLAAGGWRRPLPSSASINVRLLDAAVQVFAASFGQQSEESKLEGISGLMHTLPEH 1053 C CVR G+SL+S + G H + E W C + A+ G + L P H+L +DA +++ FL+ C L P + V++E + + GRL V + +A L+E FAWLP GSFP ++ +F ++ + +K+ ++V S+L EL+N +D++L V + ++AS G D ++ + L S ++ M + P ++ G A + + +I VFA +++ PT G WR+P+ S VRL+DAA+Q F+A+FG +S + + + L +P + Sbjct: 239 CMCVRAGYSLISGIMTTGPGGVAPHTPVIFEAWNKCQQAAKKGG-----KHLAPRHDLFCVDALLVSVVVFLKHCSELLLSIPEALTQVSVVLEELLPLLTSNGRLAIIPSTPPVAAKLESARASLLEAFAWLPSGSFPMAADNVFAFAAEQIKVAVDSEVSCSILQELVNEEDSLLDVKTVSRAS----------KEAHSGGARDLAMSLIALESEAVHPAEQESVMHLISHPRFSLLGEGSAFQ---DSHI------LGVFAKKSSSGKAPTPLH-----------EVGAWRKPIDPCCSSKVRLIDAAIQAFSATFGLKSGKEQQSAMDMLESLVPPY 544
BLAST of mRNA_H-paniculata_contig12276.1449.1 vs. uniprot
Match: A0A7S2YS11_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YS11_9STRA) HSP 1 Score: 103 bits (256), Expect = 4.250e-20 Identity = 92/365 (25.21%), Postives = 154/365 (42.19%), Query Frame = 1 Query: 43 CTCVRTGWSLMSSLFCVGEEWAEGHAGRLMELWASCMRGAEDGPAATRLRGLEPAHELILLDASTRALLWFLRSCPNTLCMEPGRMALAIVLMESAVEAV--EGRLKSPVKKQGVICRT-LLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELLNPDDTVLSVASTAKASIGIVPTMSGVGSVVEGEDLDTVLAQVT--LVSGVTIGPQERDAMVCSADPWAGRGPSPARRRRAE-----------------------ENIPPTPKHASVFASGTAASSFPTSAVGGGSSGGDNGLAAGGWRRPLPSSASINVRLLDAAVQVFAASFGQQSEESKLEGISGLMHTLPEH 1053 C CVR G+ ++SS+ G H R+ W + G + L P H+LI +DA +++ FL+ C L P + VL+E + + +G+L S + R +A L+E FAWLP GS+P ++ +F ++ ++++ +++ S+LP LL +D++L S ++ EG+ D + T L+S ER+A++ D RRR E ++ PPTP H G WRRP+ S+S +RL+DAAVQ FAA+FG +S + + ++ L +P++ Sbjct: 299 CACVRAGFMVISSIMSNGPRGISEHIPRIFGAWQKAGNSTKGGGSL-----LAPHHDLICIDAVLHSVVVFLKYCSELLLSIPEALTQVSVLLEETLPLLTTDGKLGSIPLTPHISARLESARASLLESFAWLPSGSYPMAADSVFAFAAENIQAAVYSEISCSILPALLVQEDSLLDTCSLSRVKR-------------EGQSGDAKDLEYTALLLSAEFSHHTEREAVLHLQD-----------RRRTEYLDSGGDKFRDSSILGMSCGKKVKHQPPTPLHE-----------------------------VGMWRRPMEPSSSAKIRLVDAAVQAFAATFGLKSGKEQQSAMNMLEALVPQY 605
BLAST of mRNA_H-paniculata_contig12276.1449.1 vs. uniprot
Match: B7FRH8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRH8_PHATC) HSP 1 Score: 103 bits (256), Expect = 4.390e-20 Identity = 88/346 (25.43%), Postives = 151/346 (43.64%), Query Frame = 1 Query: 43 CTCVRTGWSLMSSLFCVGEEWAEGHAGRLMELWASCMRGAEDGPAATRLRGLEPAHELILLDASTRALLWFLRSCPNTLCMEPGRMALAIVLMESAVEAV--EGRLKSPVKKQGVICRT-LLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELLNPDDTVLSVASTAKASIGIVPTMSGVGSVVEGEDLDTVLAQVTLVSGVTIGPQERDAMV-------CSADPWAGRGPSPAR--RRRAEENIPPTPKHASVFASGTAASSFPTSAVGGGSSGGDNGLAAGGWRRPLPSSASINVRLLDAAVQVFAASFGQQSEESKLEGISGLMHTL 1044 C CV+ G++++S + G + A + W + G L P HEL+ +DA +++ FL+ C L P + VL+E+ + + +G S V+ R ++ L+E FAWLP GSFP + +F ++ +H++ +V S+L L++ +D++L + ++A G + DL+ + L++G P ER+A++ DP RG + A PPTP H G WR+P+ S S VRL+DAA+Q F+A+FG +S S+ +G ++ +L Sbjct: 793 CNCVKAGFAIISGVLANGPKAAAPSVSLIFNSWQKAISSITGGGKI-----LSPRHELLCVDAMLSSVVVFLKYCSELLLSVPEALTQVTVLLENVLPMLLPDGTFGSLPFSAPVMARLESSRSSLLEAFAWLPSGSFPMVADTVFSFAAEHIRAAVEGEVSCSILHALVSREDSILDAKTMSRARRD--------GQIGGARDLEET---ILLLTGEIAHPGEREAVLHLSMYNRSEPDPSVFRGSRILGICAKDASGEKPPTPLHG-----------------------------VGTWRKPIDPSCSSKVRLVDAAIQAFSATFGLKSG-SEQQGAMDMLESL 1092
BLAST of mRNA_H-paniculata_contig12276.1449.1 vs. uniprot
Match: A0A1Z5KE67_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KE67_FISSO) HSP 1 Score: 98.6 bits (244), Expect = 1.510e-18 Identity = 90/350 (25.71%), Postives = 154/350 (44.00%), Query Frame = 1 Query: 40 VCTCVRTGWSLMSSLFCVGEEWAEGHAGRLMELWASCMRGAEDGPAATRLRGLEPAHELILLDASTRALLWFLRSCPNTLCMEPGRMALAIVLMESAVE--AVEGRLKSPVKKQGV-ICRTLLKALLMECFAWLPPGSFPGSSTRLFKWSLDHLKMYTLNDVQSSLLPELLNPDDTVLSVASTAKASIGIVPTMSGVGSVVEGEDLDTVLAQVTLVSGVTI-GPQERDAMVCSADPWAG--------RGPSPARR--RRAEENIPPTPKHASVFASGTAASSFPTSAVGGGSSGGDNGLAAGGWRRPLPSSASINVRLLDAAVQVFAASFGQQSEESKLEGISGLMHTLP 1047 VC CVR G +++S + G + + H + + + A++G +G+ P H++ +D+ A++ FL L P + +++E A+ A +GR + + V + KA L+E FAWLP G+FP ++ + + + ++ +D+ S+LP ++N +D +L + ++A +G G V DL+ L +TL + V + G +E +++ D RG R A + PPTP H G WRRPL S + VRL DAA+Q FAA+FG +S + E + L +P Sbjct: 727 VCFCVRAGCNIISGILAAGIDGIDAHIPLVFKSCQTVCNLAKEGS-----KGVAPVHDVFCIDSVLSAIVVFLTYNSVLLLSVPDALTQITLMLEGALTLFATDGRFATIEQSTRVTVALDSAKASLLEAFAWLPSGTFPIAADEVSRLAASQIREAIDSDITCSILPSMVNREDHILDAKTFSRARLG--------GQVGGFLDLEETL--ITLNADVALHGDRESISLLLEHDLGGKQDNHNSTFRGSQILGRALNAAHSHKPPTPLHE-----------------------------VGTWRRPLDPSCAGKVRLTDAAIQAFAATFGLKSGHEQQEAMDMLESLVP 1032 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12276.1449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12276.1449.1 >prot_H-paniculata_contig12276.1449.1 ID=prot_H-paniculata_contig12276.1449.1|Name=mRNA_H-paniculata_contig12276.1449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=367bp MGVVCTCVRTGWSLMSSLFCVGEEWAEGHAGRLMELWASCMRGAEDGPAAback to top mRNA from alignment at H-paniculata_contig12276:1095..6461+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12276.1449.1 ID=mRNA_H-paniculata_contig12276.1449.1|Name=mRNA_H-paniculata_contig12276.1449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5367bp|location=Sequence derived from alignment at H-paniculata_contig12276:1095..6461+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12276:1095..6461+ >mRNA_H-paniculata_contig12276.1449.1 ID=mRNA_H-paniculata_contig12276.1449.1|Name=mRNA_H-paniculata_contig12276.1449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2202bp|location=Sequence derived from alignment at H-paniculata_contig12276:1095..6461+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |