mRNA_H-paniculata_contig12208.1403.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12208.1403.1 vs. uniprot
Match: UPI0019394CC4 (transient receptor potential cation channel subfamily A member 1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI0019394CC4) HSP 1 Score: 60.5 bits (145), Expect = 8.440e-8 Identity = 33/90 (36.67%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 157 DNPGIDPDVLDSDGKSALWTACLHGYYRVARVLLRGGADANLKCGRSNSTPLQAAASTNRWIMLRLLVEAGADLYVRTKEGFSVHHFAVL 426 D + + D+ + L A ++G+ R+A+ L+R GA ++ N TPL AAS WI +R L+EAGAD+ ++ K+G +V H VL Sbjct: 372 DQALVTLSMKDNQKHTPLHKAAMYGHGRIAQYLVREGAATDIPDAEEN-TPLLLAASRENWICVRQLIEAGADILLKNKDGRNVLHMIVL 460
BLAST of mRNA_H-paniculata_contig12208.1403.1 vs. uniprot
Match: A0A813AH93_SYMMI (DNAH1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813AH93_SYMMI) HSP 1 Score: 58.5 bits (140), Expect = 4.060e-7 Identity = 43/132 (32.58%), Postives = 63/132 (47.73%), Query Frame = 1 Query: 4 FRATVNTPSLPLQSIAAFSIPSYLDVVMARHLAVHKEAKKGDVRGVITYLHDNPGID--------PDVLDSDGKSALWTACLHGYYRVARVLLRGGADANLKCGRSNSTPLQAAASTNRWIMLRLLVEAGAD 375 FR + L S +P L V + ++AV EA D + +D ++ PD++DSDG +AL A G + ++L G AD N C +S STP+ AA T ++RLL+E GAD Sbjct: 1693 FRLKLFCGHTQLTSDTTLKLPLELQVTICDYVAV--EAVDVDELTDASLRNDAAAVEAFLRRPQHPDLVDSDGWTALLAAAGSGALQSVKLLASGRADLNKPCEQSGSTPVFLAAQTGHLDVVRLLIENGAD 1822
BLAST of mRNA_H-paniculata_contig12208.1403.1 vs. uniprot
Match: UPI0003C15A92 (protein phosphatase 1 regulatory subunit 16A-like n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0003C15A92) HSP 1 Score: 56.2 bits (134), Expect = 1.260e-6 Identity = 34/107 (31.78%), Postives = 55/107 (51.40%), Query Frame = 1 Query: 79 VVMARHLAVHKEAKKGDVRGVITYLHDNPGIDPDVLDSDGKSALWTACLHGYYRVARVLLRGGADANLKCGRSNSTPLQAAASTNRWIMLRLLVEAGADLYVRTKEG 399 VV +++ + + A + D L GI+PD+ + DG +AL C+ + + ++LL GAD N C TPL AAA+ ++ LLV+ GA+L +G Sbjct: 70 VVFPQNIMLLEAATRNDAEEAGELLRS--GINPDLYNEDGLTALHQCCIDDFEEIVKLLLDAGADVNA-CDSELWTPLHAAATCGHLHLVELLVKHGANLLAVNADG 173
BLAST of mRNA_H-paniculata_contig12208.1403.1 vs. uniprot
Match: A0A6P8RHC8_GEOSA (inactive serine/threonine-protein kinase TEX14-like isoform X1 n=2 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8RHC8_GEOSA) HSP 1 Score: 57.0 bits (136), Expect = 1.330e-6 Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 115 AKKGDVRGVITYLHDNPGIDPDVLDSDGKSALWTACLHGYYRVARVLLRGGADANLKCGRSNSTPLQAAASTNRWIMLRLLVEAGADLYVRTKEGFSVHHFAVLADS 435 A KG R V L GID ++ +S G++AL+ + L G+ V +LL A+ N +C + STP+ AAA + R +L L+ AG DL + +EG + +A +A S Sbjct: 58 ATKGRSRKVKQLLKQ--GIDVELQNSAGQTALFLSALFGHIDVTEILLHYRANVNHRC-KDGSTPVHAAAFSCRGPILLQLLSAGGDLRLHDQEGRTPRDWAEIAGS 161
BLAST of mRNA_H-paniculata_contig12208.1403.1 vs. uniprot
Match: A0A1G6ZRS1_9FLAO (Ankyrin repeat-containing protein n=1 Tax=Pricia antarctica TaxID=641691 RepID=A0A1G6ZRS1_9FLAO) HSP 1 Score: 54.3 bits (129), Expect = 1.550e-6 Identity = 35/102 (34.31%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 142 ITYLHDNPGIDPDVLDSDGKSALWTACLHGYYRVARVLLRGGADANLKCGRSNSTPLQAAASTNRWIMLRLLVEAGADLYVRTKEGFSVHHFAVLADSPDAL 447 I+ D P I ++ + + S+ A + G Y + L+ G D N K TP AA N+ +L LL+E+GADL +++ GFSV +A L+++ DAL Sbjct: 24 ISAATDGPAITKNIKEVN-ISSFCKAIVKGDYNTVKSLVDLGEDVNQKS--LGMTPAMFAARYNKVEILELLIESGADLQIKSDNGFSVKKYAELSNAVDAL 122
BLAST of mRNA_H-paniculata_contig12208.1403.1 vs. uniprot
Match: A0A6P8Y4T1_THRPL (ankyrin repeat domain-containing protein 39 n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8Y4T1_THRPL) HSP 1 Score: 54.3 bits (129), Expect = 6.700e-6 Identity = 32/87 (36.78%), Postives = 45/87 (51.72%), Query Frame = 1 Query: 154 HDNPGIDPDVLDSDGKSALWTACLHGYYRVARVLLRGGADANLKCGRSNSTPLQAAASTNRWIMLRLLVEAGADLYVRTKEGFSVHH 414 H G + + DS G + L A G+ +A +LLR GAD N++ TPL AA + + M + LVE GAD+ +G SV H Sbjct: 122 HLRKGTNVNCYDSGGYAPLHYAARKGHIDIAHLLLRNGADINIRTRAGKVTPLLRAAYSGKEKMCKFLVEKGADVRAVDDDGQSVVH 208
BLAST of mRNA_H-paniculata_contig12208.1403.1 vs. uniprot
Match: A0A6G1J454_9PLEO (Ankyrin n=1 Tax=Lentithecium fluviatile CBS 122367 TaxID=1168545 RepID=A0A6G1J454_9PLEO) HSP 1 Score: 53.9 bits (128), Expect = 1.500e-5 Identity = 33/92 (35.87%), Postives = 45/92 (48.91%), Query Frame = 1 Query: 157 DNPGIDPDVLDSDGKSALWTACLHGYYRVARVLLRGGADANLKCGRSNSTPLQAAASTNRWIMLRLLVEAGADLYVRTKEGFSVHHFAVLAD 432 D P D + DS G +AL AC G AR+LL GAD + TPL AA ++++L+E G D+ VRT+ G + V D Sbjct: 462 DKPNCDINARDSFGNTALLWACRRGDEDSARILLVKGADPEIPNSNYGRTPLMAACVHPSVPIIKMLLENGVDVNVRTRSGLDALIYLVEED 553
BLAST of mRNA_H-paniculata_contig12208.1403.1 vs. uniprot
Match: UPI001C0D2ECD (ankyrin repeat domain-containing protein n=3 Tax=Polynucleobacter TaxID=44013 RepID=UPI001C0D2ECD) HSP 1 Score: 53.1 bits (126), Expect = 1.610e-5 Identity = 28/85 (32.94%), Postives = 47/85 (55.29%), Query Frame = 1 Query: 184 LDSDGKSALWTACLHGYYRVARVLLRGGADANLKCGRSNSTPLQAAASTNRWIMLRLLVEAGADLYVRTKEGFSVHHFAVLADSP 438 +D G + L AC G+ VA+ L+ GA + + N+TPL A + ++++LL++ GADL +R +G S AV+ + P Sbjct: 123 IDHVGWTPLHYACARGHLDVAQFLIANGAAID-SLSQGNTTPLMMAVQSGNEVLVKLLLDKGADLQLRNSQGLSAIDIAVIYEKP 206
BLAST of mRNA_H-paniculata_contig12208.1403.1 vs. uniprot
Match: A0A8J4GZG7_9BACL (Uncharacterized protein n=1 Tax=Xylanibacillus composti TaxID=1572762 RepID=A0A8J4GZG7_9BACL) HSP 1 Score: 52.8 bits (125), Expect = 2.020e-5 Identity = 33/104 (31.73%), Postives = 53/104 (50.96%), Query Frame = 1 Query: 97 LAVHKEAKKGDVRGVITYLHDNPGIDPDVLDSDGKSALWTACLHGYYRVARVLLRGGADANLKCGRSNST-PLQAAASTNRWIMLRLLVEAGADLYVRTKEGFS 405 + VH+ A GD V L P + D DG + L AC G + A +L++ GA N+ + P+ AAA+ R ++++LL+E GAD V+ G++ Sbjct: 61 VTVHEAAMLGDADTVAYLLDQEPSL-LDTFSFDGWTPLHLACFFGGHEAAELLIQRGAQLNIASQNEMANCPIHAAAAGKRTLIVKLLLEHGADPNVQQHGGWT 163
BLAST of mRNA_H-paniculata_contig12208.1403.1 vs. uniprot
Match: A0A1Z4KX76_ANAVA (Uncharacterized protein n=1 Tax=Trichormus variabilis NIES-23 TaxID=1973479 RepID=A0A1Z4KX76_ANAVA) HSP 1 Score: 53.1 bits (126), Expect = 2.400e-5 Identity = 32/108 (29.63%), Postives = 54/108 (50.00%), Query Frame = 1 Query: 124 GDVRGVITYLHDNPGIDPDVLDSDGKSALWTACLHGYYRVARVLLRGGADANLKCGRSNSTPLQAAAS--------------TNRWIMLRLLVEAGADLYVRTKEGFS 405 GD+ V+ + + G+D + + S+G L TA GY + RVLL GA+ + TPL ++A N+ ++RLL+ AGAD+ ++ EG++ Sbjct: 204 GDLNTVVQTIKN--GVDVNAISSEGTIPLHTASFWGYLPIVRVLLEAGANLESRTEDDGKTPLMSSAEGSALLATYPSSIDRMNQIEVIRLLINAGADVNAKSNEGWT 309 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12208.1403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12208.1403.1 >prot_H-paniculata_contig12208.1403.1 ID=prot_H-paniculata_contig12208.1403.1|Name=mRNA_H-paniculata_contig12208.1403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp MFRATVNTPSLPLQSIAAFSIPSYLDVVMARHLAVHKEAKKGDVRGVITYback to top mRNA from alignment at H-paniculata_contig12208:3717..4163+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12208.1403.1 ID=mRNA_H-paniculata_contig12208.1403.1|Name=mRNA_H-paniculata_contig12208.1403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=447bp|location=Sequence derived from alignment at H-paniculata_contig12208:3717..4163+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12208:3717..4163+ >mRNA_H-paniculata_contig12208.1403.1 ID=mRNA_H-paniculata_contig12208.1403.1|Name=mRNA_H-paniculata_contig12208.1403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at H-paniculata_contig12208:3717..4163+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |