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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1313 |
| Cds size | 1182 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1215.1365.1 >prot_H-paniculata_contig1215.1365.1 ID=prot_H-paniculata_contig1215.1365.1|Name=mRNA_H-paniculata_contig1215.1365.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=394bp
MGCAPSSERGWETGDVACGCFGCTTCTGCVRSVGCGGCVDTGDIGCLGCA
TCVSSGDTCSHACGGSCGTACANFCNGCQGTCDTGCALCCGGQGHGPNTV
EYQDASSAVPLPEGQISGSDDYHWLGAGTSGKITHDGAVKVAHGAEPLKP
VGAEGPDTADASAKVGALGVGAGAAAAAAAAAAVVVSSSGKTGSASLKTG
DVTEAAPPVSGSADADIIMPSMSGDVNMTTSSKTGEGSGMKMPSMLGGDG
PKAPSMFGSVKVPSMSGGDSTSGSDMIAMNASVSGSAPSMSGGLDAPTPG
SMPSMSEDLLASGVAGSGIGGSGVDANVPSMSGGGAEVEKPSAQLSGVVP
SVSEGAEGVDGALPDVSATVSVSPIRPLSASSGKVGVPEAAAAP back to topmRNA from alignment at H-paniculata_contig1215:12791..18646+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1215.1365.1 ID=mRNA_H-paniculata_contig1215.1365.1|Name=mRNA_H-paniculata_contig1215.1365.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5856bp|location=Sequence derived from alignment at H-paniculata_contig1215:12791..18646+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGTCTGAGCGCTCCACACAAACAAATTGAAGAAGGGTAAATTTCCAACAG
TAAAGCCCGAACGCCATCCGTCCGGCTGGACTCTTCACAGAACGACGGAT
CTTGGATAGCCCACGAACAACCTGGTGAGTATACGCACAAGAGCTGTGTG
TTACTAATGTGTTGGTACAGTATCCACGCCAGAGTTTTGCGGTTGAGGGT
GTTTTCAAACTGTGGAGGACCCCATTCCAAACTCTAAATATTAATTAGTC
TTTTCGGCCGTGGCTGTTGTTCCTTTCACATTGGATGGGTAAACGACGAC
AGGGGTAAACCATCACCATTAGGGCCGAACACTATCACTGTATAGCGAAT
TTATCGCTGTGGTGGTGTAGAATGCGAGTGCAGTATTCTCAAGTGCTCAA
TTGTAAAATTAAGTCTAGCCTGTTGGCGGGGCAGTGAAGTAGGAACACGA
ACTCGCTGTGCCTGGCATGAACTGCAACCGCCTTGAAACATTATTTTCCT
ATTTAATCCCGTTGGTGTGATCTATTCTTCGTCAAAACGCACAGCGAATA
TGGGGTGTGCCCCGTCTTCGGAACGAGGTTGGGAAACAGGAGATGTTGCA
TGCGGCTGCTTTGGGTGTACTACCTGCACCGGCTGTGTGCGTAGCGTCGG
GTGTGGCGGCTGTGTCGACACTGGTGACATTGGCTGTCTCGGGTGTGCGA
CATGCGTCAGCTCTGGCGATACCTGCAGCCACGCGTGTGGTGGTTCCTGC
GGCACAGCGTGCGCCAATTTTTGTAATGGCTGCCAGGGTACCTGTGATAC
TGGTTGTGCTTTGTGTTGTGGGGGCCAAGGCCACGGGCCGAATACAGTGG
AATACCAAGATGCCAGCTCTGCGGTGCCGCTCCCAGAAGGTGGGCGCCGA
AAGGGAGTTCAGTTAGTCTATGTGAAGGCCTTCCTTAAATCTATCTTCAC
CCTACCCTCTCTTGATGGATTTCAACTTGCATGCACTTTTTTTCTCTCTC
TTTTTCACATTTTGTGCATGTTATTTTTCTGTACTGAGCCATGTCTCTCA
ATGTGGTAAATGAGACGGTAAAAATGCGTGAGCATGCTGTTCTGTAATGT
ATTTTGTATAACTGGTAATTTCCCCATCAGCTCAGGGTGTGTCTACATCC
CCCATCCTACCGAGCACAACACCGCCAGCAGTCCGAATTCATAGCTTTCC
TTCCCCGTGGATTTGTTTGCCCCGGCGCAAGGACTTTTTTGGCAGGAGTT
TTCGAATTTCTTCTCTTGGAAGCAAAAATGGGGGAGTAAAACCCTGACCG
AAACTTCACATCCTCTTCATTGTGGGGGCTGGCAGGGACTCGCCCCAGAT
GGTTTCTTTCACCACTGAAAATAACGGTTGCACAGCGCGCCCTCAAGAGA
GAAAAGGAGTACATTTTCTAGTGAGAAACGGACATTTCGATCTTCGCGCG
GTCTTGGCGGGAGTGTTGGGGGAGATGATGTTAAACTTCATTACCTCAGT
TGACATTAATGATTGTACAGTTTTACTCAATTTTCATTTATGCCCCCCGA
AACGGACCGGCCAGTGGTATGGTTAACAGTTTACTAACGTTCCGACTGAT
CAAGGAGGTCGGAGGTCCGCTGATCGTGCTCGTCGTTTAGTCGTTCCTTC
AAACTCGCCAAAAGGAATCCATGTTCAGTATACGCTCGTGTAGTCAATAT
TTGCAAAAGTATTCCATGGGTCATGGAATTGAGTATGTCAACAGACAAGA
CAGTTCACTTATTTTTACTTGTTCTTTCGGGCGTTGTAGAGTCGTAACAG
TAGATTCACTTTTATAGCCAGTTTTTGGTGGTCAAACTGTGAGATTGCTG
TCTCCTCGCTACTCTCGTCACAAACCGACCAAGCCACACGTGGCGACCGA
AGCGTTTTCTTAAGGAAAAAGTCAGGATTTCTGGAGACGTTGCAGCAAAC
ACCCATGTCAATGAAAGACATTTGACACATGAACCTTCATATCCCCAAAT
TCATCTTGTCATGAACGTCAAAACAGTCCGTTTTTTGATGGCGTCTGCCT
ACATTTTTATCCTTCTTGTGTGCAGGACGGCACCAGACGCGGGAGACCCC
AAAATGCGTCTCTTCGTTAGCATACGCTCTTCTCTCGTTCCTTCTTTTCC
TTGTGTGCTTTTTTCGCTGTTCTCACTTTGGCCCCAACATATTCGAATCC
TACACGAGCAGGTCAGATAAGCGGCAGCGACGATTACCACTGGCTGGGGG
CCGGGACCTCCGGAAAGATCACTCATGATGGTGCCGTAAAGGTGGCTCAT
GGCGCGGAACCATTGAAGCCTGTTGGCGCCGAAGGTCCTGATACAGCTGG
TGCGTTTTGTTAATTCGTACATACGATACCTGATAGGTACTTTGCTTGGA
ACCTGACCTCGTCTTGCTTGCCACAAGAAGTGATGTATCAAGGATAGTGA
GTGTGCGTATCTTCATGTGTTTTGGTTCGATGTAGCTGTTTACGCTGTTC
TTGTGGTCCTTGCCCGTTATCGATCAATCGTCTCGCCTCCCGCTCACTTG
CGTCCATAATCCCTGATGCCCCATGTTTTGTGCCTTCATGTAATTTGTAC
TGTTGCTTTATGATGGCTCTCTACCAAATGTTCTAACTGCACATGAGAAG
ATATTCGTAGATGCGCTTCATTTTTTTCTCTGAAAACCACCCTGAAGTTG
ACTCAAGTGGCGGGTAATTTTATTCTTCCAAGCGTATGACGCGAAAATTG
CAGGCAGGCAGTTACTGTGGCAGCGACGTGCTGTCAAGTAGTTCAACTTG
TGTAGTTCTCTGAAGGTATCTTCTAATATCCTGGGAACATATCGGCACAT
GAGAGGTCACAGGATTGGTGATGAGGCCAAACGAGCATGCGAAGTACATC
GAAAACTCCACGTATTTAGTTGGCATCAGCTGTTCTGTACCCTTTAACTC
TGCTGTTGAGCCTTTGCTCGCCGTCGAAATTATTGTTCTACGCCGAGTAC
CTTGTCATATTTCCATATGGTACACATCTCTGATCTCCGCTCGAACCGTC
ACTTGTGTCGAACTCCTTACGCAAATTAGCGACGTGGAGAACACTTCACA
GCAAACCTACTCAAGCACACGGCAGTGGTGGATTGTGCTCCTGGTTTCGA
TTTGAACGTTCGCAAAAGAGATACACGATGCAGTGAACATGCATCTGCTA
CATTTCAGCTGTTTCGTGCCAAAATGCGTAAGGAACATATCCGTGAAGGT
CGTTTAGAGATACTTCCTGGTCAACAAAAGCTGAAGTGTGGGAAAGGTCT
CTGTTGGGCAACAGTAGCGTTTTGATGTGTCAAAAACAGAGATTCGAAAC
CTGCCGTAAACTATCTCGTAGTATATACAGCCAGTATACTTCTAGCAAAA
GCTTTGTATAATAGCGTTGGTCGTGGCTTGACAAATAAATCGATAGAATC
TTCCTTCATTGCATGTAACCTCCCCCTACACGGTAACCTAGTAAGGTACA
ACAGCATAACCTAGAATGGAGTAATATACCACGACTGTCCAAAAACGTTA
CGTGGTGAGACATATCGGTGCATGTATCTTAGTTTTTAATCCAAAAGTTG
TCCACCCGCTATGGTTATCTCGCTGATGTGGCCCTTACATTCACCCCTCG
GTTCATGTCTTGAGGTGCAGTCGATGAGGCCACTTCGGTTTAACGGGTGC
AGTCCAAGCTTATGTGGGCAGTGTTGAATTTCTCTATCGCCCGTTTGCAA
TTGTTGAACATGCTCGTCACTTCATATCTGCCTCGTCTGTCTCAGCGGTG
GTTCCTATCCACAGCCCTATGAACAACGGTCAACCTCGCTACCTCGACGA
AGAGAAACCAATGCGAATTATGTCATCACGGGTAAAAAGAGCTTCCTCTA
TTGAGACGGACAAAAATATATGACATACAAACTCTTGCACACGACAACTG
GAGCCCTCGTGATTCTTTCAGAGGTATTTTTTTTCGAAGCAGCCTCAGGT
TTGACGGTGGAGGCACCACCAATAATTACCTGATTTCAATTACAGTAAGT
CTCCGGCGACTGCATGAGACGGAAATGCCATAAGGATTTCTTGCGGTGAT
CGTATGCGCGCAGACATGACACGAGGCCGAGGTCAACGTTTATGTCTCGG
TGCGCCAAAACTGATGTTAAGTTTGGTTGGTTCTGTGAAAGAATGATATT
GATTCAACTGTTGATTTGTTTGTACATACCCATCTAGTACACAATAGGTG
TGTCAGGGCACACCGAGGCTTTCAAATTTTATATTGGTGATCGTTGTAAA
ATGGTTGACTCAAAAAGATTGTATGAAAGAAAAGACCCCAAATCACAGTC
TTTTGCTGAAAATGCGGAAACAATGTACACGGCGAGACTTTGAGTGCACA
CGCGCACCGAAGGATTGCACGTTGTTTTTCGCGCAGCCTTGCTTCAGATT
TTGTTTGGCGTGCATCCGTGTCCTTTCTGCAGTAGCGGAAGTGTGCCGTT
TTTTACCTTCAGTCGGCGTCTGACTTCGGCGGCTAGATGTCGATAACATC
TGTCCTCTTCAATTCTGAATTCCTTTTCCGCGGACCAAGTAGCTCCAGCC
CGGGCTACGCTTTGTTGTAATGGGAAGAGCGGAGCTTCATGATTACAGTA
CTGGTAGCATGTGTTTTGTCGTGCTCGTTGTAGCTCACTTCCTGTCTTCA
TCAGATACGTAAAACAACCTTGGTTTGCTTTAGTGGTAAGCCTCGCACTT
TTCCAGTTTCTTGCCCTATAAAACTTGACACGAAGGGGATCTCCCGCACC
TCGTGATTATAACAAAAAGTGTAAATTGTCGTTTTTGGTGGTTCCTGGGC
TAAATTGGAGTGGGCGTCGCCCTGACGCGCAATTTCTACTTCCGTCGTTG
AACATTCAGTAATGAGATGACTAACCATCGGTCACCGGCTATTATAGATG
CGATGCACAACATGTTGTGATAGTAGTGACGTTCATTATCAAAATGTTGG
ATTTCCAATGATGAGTGGAAAGCGAGCTCGATCAGCGATTCGAATTCATC
ACCCTAGGAGCCCTTCTTCCTTTCTTCTCTTGAGAGGATTTGATGTAGCC
GTAACTCGGCGTTCCTCCTCCAATGGGTTCCCTGTAAAATTTGTCGCTGC
AGATGCTAGCGCAAAGGTAGGAGCACTCGGTGTGGGCGCCGGGGCAGCGG
CAGCGGCAGCGGCAGCGGCAGCGGTGGTAGTGTCGTCGTCCGGCAAAACT
GGATCAGCGTCCCTCAAGACCGGGGACGTAACTGAAGCCGCACCGCCTGT
CTCAGGCTCGGCCGACGCCGACATCATCATGCCTTCCATGAGCGGAGACG
TGAACATGACTACTTCTTCCAAGACCGGAGAAGGAAGCGGAATGAAGATG
CCCTCCATGCTCGGGGGCGATGGGCCCAAAGCACCTTCCATGTTCGGAAG
CGTGAAGGTTCCTTCCATGTCCGGAGGAGATAGCACGAGCGGATCGGACA
TGATTGCCATGAACGCGTCCGTGTCTGGCTCGGCGCCCTCCATGAGCGGG
GGCTTGGATGCCCCCACACCTGGCTCCATGCCCTCCATGAGCGAGGACTT
GCTGGCCAGCGGGGTTGCTGGAAGCGGGATCGGTGGCAGCGGAGTGGACG
CCAACGTTCCGTCCATGAGCGGCGGCGGCGCCGAGGTAGAAAAGCCTTCG
GCCCAACTTTCAGGGGTTGTCCCTTCCGTGTCGGAGGGTGCGGAAGGAGT
GGACGGCGCTCTGCCCGATGTGTCAGCTACTGTATCAGTTAGTCCCATCC
GACCGCTTTCCGCGTCTTCCGGCAAGGTGGGGGTTCCGGAAGCAGCAGCG
GCACCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1215:12791..18646+ >mRNA_H-paniculata_contig1215.1365.1 ID=mRNA_H-paniculata_contig1215.1365.1|Name=mRNA_H-paniculata_contig1215.1365.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2364bp|location=Sequence derived from alignment at H-paniculata_contig1215:12791..18646+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGTGTGCCCCGTCTTCGGAACGAGGTTGGGAAACAGGAGATGTTGC
ATGCGGCTGCTTTGGGTGTACTACCTGCACCGGCTGTGTGCGTAGCGTCG
GGTGTGGCGGCTGTGTCGACACTGGTGACATTGGCTGTCTCGGGTGTGCG
ACATGCGTCAGCTCTGGCGATACCTGCAGCCACGCGTGTGGTGGTTCCTG
CGGCACAGCGTGCGCCAATTTTTGTAATGGCTGCCAGGGTACCTGTGATA
CTGGTTGTGCTTTGTGTTGTGGGGGCCAAGGCCACGGGCCGAATACAGTG
GAATACCAAGATGCCAGCTCTGCGGTGCCGCTCCCAGAAGATGGGGTGTG
CCCCGTCTTCGGAACGAGGTTGGGAAACAGGAGATGTTGCATGCGGCTGC
TTTGGGTGTACTACCTGCACCGGCTGTGTGCGTAGCGTCGGGTGTGGCGG
CTGTGTCGACACTGGTGACATTGGCTGTCTCGGGTGTGCGACATGCGTCA
GCTCTGGCGATACCTGCAGCCACGCGTGTGGTGGTTCCTGCGGCACAGCG
TGCGCCAATTTTTGTAATGGCTGCCAGGGTACCTGTGATACTGGTTGTGC
TTTGTGTTGTGGGGGCCAAGGCCACGGGCCGAATACAGTGGAATACCAAG
ATGCCAGCTCTGCGGTGCCGCTCCCAGAAGGTCAGATAAGCGGCAGCGAC
GATTACCACTGGCTGGGGGCCGGGACCTCCGGAAAGATCACTCATGATGG
TGCCGTAAAGGTGGCTCATGGCGCGGAACCATTGAAGCCTGTTGGCGCCG
AAGGTCCTGATACAGCTGGTCAGATAAGCGGCAGCGACGATTACCACTGG
CTGGGGGCCGGGACCTCCGGAAAGATCACTCATGATGGTGCCGTAAAGGT
GGCTCATGGCGCGGAACCATTGAAGCCTGTTGGCGCCGAAGGTCCTGATA
CAGCTGATGCTAGCGCAAAGGTAGGAGCACTCGGTGTGGGCGCCGGGGCA
GCGGCAGCGGCAGCGGCAGCGGCAGCGGTGGTAGTGTCGTCGTCCGGCAA
AACTGGATCAGCGTCCCTCAAGACCGGGGACGTAACTGAAGCCGCACCGC
CTGTCTCAGGCTCGGCCGACGCCGACATCATCATGCCTTCCATGAGCGGA
GACGTGAACATGACTACTTCTTCCAAGACCGGAGAAGGAAGCGGAATGAA
GATGCCCTCCATGCTCGGGGGCGATGGGCCCAAAGCACCTTCCATGTTCG
GAAGCGTGAAGGTTCCTTCCATGTCCGGAGGAGATAGCACGAGCGGATCG
GACATGATTGCCATGAACGCGTCCGTGTCTGGCTCGGCGCCCTCCATGAG
CGGGGGCTTGGATGCCCCCACACCTGGCTCCATGCCCTCCATGAGCGAGG
ACTTGCTGGCCAGCGGGGTTGCTGGAAGCGGGATCGGTGGCAGCGGAGTG
GACGCCAACGTTCCGTCCATGAGCGGCGGCGGCGCCGAGGTAGAAAAGCC
TTCGGCCCAACTTTCAGGGGTTGTCCCTTCCGTGTCGGAGGGTGCGGAAG
GAGTGGACGGCGCTCTGCCCGATGTGTCAGCTACTGTATCAGTTAGTCCC
ATCCGACCGCTTTCCGCGTCTTCCGGCAAGGTGGGGGTTCCGGAAGCAGC
AGCGGCACCAATGCTAGCGCAAAGGTAGGAGCACTCGGTGTGGGCGCCGG
GGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGTGGTAGTGTCGTCGTCCG
GCAAAACTGGATCAGCGTCCCTCAAGACCGGGGACGTAACTGAAGCCGCA
CCGCCTGTCTCAGGCTCGGCCGACGCCGACATCATCATGCCTTCCATGAG
CGGAGACGTGAACATGACTACTTCTTCCAAGACCGGAGAAGGAAGCGGAA
TGAAGATGCCCTCCATGCTCGGGGGCGATGGGCCCAAAGCACCTTCCATG
TTCGGAAGCGTGAAGGTTCCTTCCATGTCCGGAGGAGATAGCACGAGCGG
ATCGGACATGATTGCCATGAACGCGTCCGTGTCTGGCTCGGCGCCCTCCA
TGAGCGGGGGCTTGGATGCCCCCACACCTGGCTCCATGCCCTCCATGAGC
GAGGACTTGCTGGCCAGCGGGGTTGCTGGAAGCGGGATCGGTGGCAGCGG
AGTGGACGCCAACGTTCCGTCCATGAGCGGCGGCGGCGCCGAGGTAGAAA
AGCCTTCGGCCCAACTTTCAGGGGTTGTCCCTTCCGTGTCGGAGGGTGCG
GAAGGAGTGGACGGCGCTCTGCCCGATGTGTCAGCTACTGTATCAGTTAG
TCCCATCCGACCGCTTTCCGCGTCTTCCGGCAAGGTGGGGGTTCCGGAAG
CAGCAGCGGCACCA back to top
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