mRNA_H-paniculata_contig12127.1347.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12127.1347.1
Unique NamemRNA_H-paniculata_contig12127.1347.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12127.1347.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 5.890e-46
Identity = 96/241 (39.83%), Postives = 133/241 (55.19%), Query Frame = 1
Query:   52 GKFYSGATVSHDPERVQGLASMRRPSTAGELVQFLQASNWMRTSVPELAVVVEPMREMLETFL-NNTCRTRCAADEITIKRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDANDRFWGSCVTQVPSEELSAGGDEAEMSHEPLAFLSGAFKGAQRRWPVPRMAPVTRVYMLPMQDDVAPAVDTLDGYKYVL----AIEDDLNGFVWLAPAKACTANF---TVEQLVKWCAIFG 750
            GK YS   + HD +R+ GLA++RRP TAGEL+QFLQA NW+RTS+P ++ +V P+RE LE  +  N  RT+  A    I    WT     +WE A + V+ AV LYHP A ++VL+FPDA+D  WGS VTQVP  E+       +MSHEPL FLSG F+G+Q RW               +  +    + T    +Y+L     I  D     ++   +AC +     T ++L  W A+ G
Sbjct:  859 GKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWAT-------------VDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLG 1086          
BLAST of mRNA_H-paniculata_contig12127.1347.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.250e-42
Identity = 101/241 (41.91%), Postives = 134/241 (55.60%), Query Frame = 1
Query:   52 GKFYSGATVSHDPERVQGLASMRRPSTAGELVQFLQASNWMRTSVPELAVVVEPMREMLETFLNNT-CRTRCAADEITIKRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDANDRFWGSCVTQVPSEELSAGGDEAEMSHEPLAFLSGAFKGAQRRWPVPRMAPVTRVYMLPMQDDVAPAVDTLDGYKYVL----AIEDDLNGFVWLAPAKACT---ANFTVEQLVKWCAIFG 750
            GK YS   V HDPER+ GLA+MRRP TAGEL+QFLQA NW+RTS+P +A VV P+R  LE  L     RT+  A+   I     T     AW  A + V+ AV L HP    +VL+FPDA+D  WGS +TQVP ++L  G    +M+HEP+ FLSG FKGAQ++    R A V +        +    V T    +Y+L     I  D     ++   +AC    A  T ++L +W A+ G
Sbjct:  957 GKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQ----RWATVDK--------EGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTAQRLDQWKAVLG 1185          
BLAST of mRNA_H-paniculata_contig12127.1347.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 7.200e-38
Identity = 80/155 (51.61%), Postives = 102/155 (65.81%), Query Frame = 1
Query:   52 GKFYSGATVSHDPERVQGLASMRRPSTAGELVQFLQASNWMRTSVPELAVVVEPMREMLETFLNNTCR-TRCAADEITIKRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDANDRFWGSCVTQVPSEELSAGGDEAEMSHEPLAFLS 513
            GK YSG  V+ DPER+QGL  MRRP TAG+L+QFLQA  W+RTS+  LA V+EP+R +LE  + +  R T+  A    IK   WT     AW +A + V+ AV L HP+   +VL+FPDA++  WGS +TQVP EEL  G     M+HEPLAFLS
Sbjct:  610 GKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPKDGFAVLMFPDASEEHWGSFLTQVPQEELERGVSVEHMTHEPLAFLS 764          
BLAST of mRNA_H-paniculata_contig12127.1347.1 vs. uniprot
Match: A0A6G0WPP4_9STRA (Reverse transcriptase domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPP4_9STRA)

HSP 1 Score: 140 bits (352), Expect = 4.060e-33
Identity = 69/167 (41.32%), Postives = 99/167 (59.28%), Query Frame = 1
Query:   52 GKFYSGATVSHDPERVQGLASMRRPSTAGELVQFLQASNWMRTSVPELAVVVEPMREMLETFLNNTC-RTRCAADEITIKRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDANDRFWGSCVTQVPSEELSAGGDEAEMSHEPLAFLSGAFKGAQRRWPV 549
            GK  S   V+H P RVQGL  +  P TA EL QFL A+NWMR ++PE + +V P+ ++L+        R + A   +++    W E+ A  +E+    +   VPL HP  ++ V ++ DA+D FWG+  TQVP ++L      +E  HEPLAFLSGAF+GA  RWP+
Sbjct:  908 GKEVSAEGVAHAPARVQGLCELEPPQTAAELQQFLCATNWMRANIPEYSALVAPLTKLLDIGAKAAASRKKTALARVSLSSIGWCEDHAECFESVKTTLQRMVPLAHPDPEKMVCLYTDASDGFWGAIATQVPLDDLEL--VASEQRHEPLAFLSGAFRGASERWPI 1072          
BLAST of mRNA_H-paniculata_contig12127.1347.1 vs. uniprot
Match: A0A6A4ZJ35_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZJ35_9STRA)

HSP 1 Score: 136 bits (343), Expect = 5.930e-32
Identity = 65/167 (38.92%), Postives = 96/167 (57.49%), Query Frame = 1
Query:   52 GKFYSGATVSHDPERVQGLASMRRPSTAGELVQFLQASNWMRTSVPELAVVVEPMREMLETFLNNT-CRTRCAADEITIKRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDANDRFWGSCVTQVPSEELSAGGDEAEMSHEPLAFLSGAFKGAQRRWPV 549
            GK  S   V+H P RVQGL  +  P TA +L QFL A+NWMR ++P+   +V P+  +++        R + A   + +    W E+    +E     +   VPL HP  D+ V ++ DA++ FWG+  TQVPSE+L+   ++    HEPLAFLSGAF+G+  RWP+
Sbjct:  552 GKEISAEGVAHSPSRVQGLCGLEPPQTAADLQQFLCATNWMRANIPQYTELVAPLTRLMDIAAKAADSRKKTALTRVALSSVGWAEDHLTCFERVKATLQRMVPLSHPDPDKMVCLYTDASEGFWGAVATQVPSEDLALPANDQR--HEPLAFLSGAFRGSSERWPI 716          
BLAST of mRNA_H-paniculata_contig12127.1347.1 vs. uniprot
Match: A0A6A5AIE2_9STRA (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AIE2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.740e-31
Identity = 65/172 (37.79%), Postives = 99/172 (57.56%), Query Frame = 1
Query:   37 RCAGAGKFYSGATVSHDPERVQGLASMRRPSTAGELVQFLQASNWMRTSVPELAVVVEPMREMLETFLNNT-CRTRCAADEITIKRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDANDRFWGSCVTQVPSEELSAGGDEAEMSHEPLAFLSGAFKGAQRRWPV 549
            R    GK  S   V+H PER+QGL  +  P TA +L QFL A+NWMR ++P+   +V P+ ++L+        R + A   + +    W+ +    ++   E +   VPL HP  D+ V ++ DA++ FWG+  TQVP E+L+     ++  HEPLAFLSG+F+GA  RWP+
Sbjct:  245 RTVWCGKEISADGVAHAPERIQGLCDLGPPQTAADLQQFLCATNWMRGNIPQYTELVAPLTKLLDIAAKAADSRKKTALTRVALSSVGWSGDHLECFDRIKETLKRMVPLSHPDPDKMVCLYTDASEGFWGAVATQVPVEDLAL--PASDQRHEPLAFLSGSFRGASGRWPI 414          
BLAST of mRNA_H-paniculata_contig12127.1347.1 vs. uniprot
Match: A0A6G0WP62_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP62_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.780e-30
Identity = 67/201 (33.33%), Postives = 108/201 (53.73%), Query Frame = 1
Query:   76 VSHDPERVQGLASMRRPSTAGELVQFLQASNWMRTSVPELAVVVEPMREMLETFLNNT--CRTRCAADEITIKRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDANDRFWGSCVTQVPSEELSAGGDEAEMSHEPLAFLSGAFKGAQRRWPVPRMAPVTRVYMLPMQDDVAPAVDTLDGYKYVLAIEDDLNGF 672
            ++HDP+RVQGL  +  P+T  +L QFL A+NWMRTS+P+ A +VEP+R +LE  + +      + A   + +    W+++ A  ++   + +   VPL HP  ++ + +F DA+   WG+  TQ+P  +L       E  HEPLAFLSG+F G+  RWP              ++ +    V+     +Y+L  E+D   F
Sbjct:  543 IAHDPDRVQGLRDLEYPATGADLQQFLCATNWMRTSIPDYARLVEPLRGLLEVAVRSAGGSSKKAALARVKLAAIGWSKDHAKCFDDVKDTLGRMVPLAHPTPEKIICLFTDASVSHWGAACTQIPKGDLEL--PLEEQRHEPLAFLSGSFTGSSCRWPT-------------IEKEAFAVVEACKRLEYLLLREEDFRSF 728          
BLAST of mRNA_H-paniculata_contig12127.1347.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 2.400e-30
Identity = 74/207 (35.75%), Postives = 106/207 (51.21%), Query Frame = 1
Query:  154 LQASNWMRTSVPELAVVVEPMREMLETFL-NNTCRTRCAADEITIKRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDANDRFWGSCVTQVPSEELSAGGDEAEMSHEPLAFLSGAFKGAQRRWPVPRMAPVTRVYMLPMQDDVAPAVDTLDGYKYVL----AIEDDLNGFVWLAPAKACTANF---TVEQLVKWCAIFG 750
            + A NW+RTS+P ++ +V P+RE LE  +  N  RT+  A    I    WT     +WE A + V+ AV LYHP A ++VL+FPDA+D  WGS VTQVP  E+       +MSHEPL FLSG F+G+Q RW               +  +    + T    +Y+L     I  D     ++   +AC +     T ++L  W A+ G
Sbjct:  117 ISAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWAT-------------VDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLG 310          
BLAST of mRNA_H-paniculata_contig12127.1347.1 vs. uniprot
Match: A0A6G0WP84_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP84_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.670e-28
Identity = 63/162 (38.89%), Postives = 93/162 (57.41%), Query Frame = 1
Query:   76 VSHDPERV---QGLASMRRPSTAGELVQFLQASNWMRTSVPELAVVVEPMREMLETFLNNTC-RTRCAADEITIKRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDANDRFWGSCVTQVPSEELSAGGDEAEMSHEPLAFLSGAFKGAQRRWPV 549
            V HD + +   +GL  +  P TA EL QFL A+NWMR  +PE + +V P+ ++ +        R + A   +++    W E+ A  +E+    +   VPL HP  D+ V ++ DA+D FWG+  TQVP ++L      +E  HEPLAFLSGAF+GA  RWP+
Sbjct:  217 VLHDEDYMVWQRGLCELEPPQTAAELQQFLCATNWMRVKIPEYSALVAPLTKLSDIGAKAAASRKKTALARVSLSSIGWCEDHAECFESVKTTLQRMVPLAHPDPDKMVCLYTDASDGFWGAIATQVPLDDLEL--VASEQRHEPLAFLSGAFRGASERWPI 376          
BLAST of mRNA_H-paniculata_contig12127.1347.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.770e-28
Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 1
Query:   52 GKFYSGATVSHDPERVQGLASMRRPSTAGELVQFLQASNWMRTSVPELAVVVEPMREMLETFLNNTCR-TRCAADEITIKRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDAN 411
            GK YSG  V+HDP R+QGLA MRRP TAGEL+Q LQA NW+RTS+P LA VVEP+R +LE  + +  R T+  A    IK   WT   A AW +A + V+ AV L HP+   +VL+FPDA+
Sbjct:  785 GKVYSGGQVAHDPARLQGLADMRRPETAGELMQVLQAVNWLRTSLPRLAEVVEPLRRLLEEHMASAPRRTKRIASNRAIKSEAWTAGMAKAWTSAQDLVAHAVALSHPKEGFAVLMFPDAS 905          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12127.1347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE5.890e-4639.83Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE1.250e-4241.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE7.200e-3851.61CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6G0WPP4_9STRA4.060e-3341.32Reverse transcriptase domain-containing protein n=... [more]
A0A6A4ZJ35_9STRA5.930e-3238.92Uncharacterized protein (Fragment) n=3 Tax=Aphanom... [more]
A0A6A5AIE2_9STRA2.740e-3137.79RT_RNaseH domain-containing protein (Fragment) n=1... [more]
A0A6G0WP62_9STRA1.780e-3033.33Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6H5JCX8_9PHAE2.400e-3035.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0WP84_9STRA2.670e-2838.89Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6H5K9E0_9PHAE2.770e-2853.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12127contigH-paniculata_contig12127:553..1806 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score153.7
Seed ortholog evalue1.5e-34
Seed eggNOG ortholog67593.Physo138264
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size990
Cds size990
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928931.6380427-CDS-H-paniculata_contig12127:552..9931622928931.6380427-CDS-H-paniculata_contig12127:552..993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12127 553..993 -
1691480672.158592-CDS-H-paniculata_contig12127:552..9931691480672.158592-CDS-H-paniculata_contig12127:552..993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12127 553..993 -
1622928931.655592-CDS-H-paniculata_contig12127:1257..18061622928931.655592-CDS-H-paniculata_contig12127:1257..1806Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12127 1258..1806 -
1691480672.171424-CDS-H-paniculata_contig12127:1257..18061691480672.171424-CDS-H-paniculata_contig12127:1257..1806Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12127 1258..1806 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12127.1347.1prot_H-paniculata_contig12127.1347.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12127 553..1806 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12127.1347.1

>prot_H-paniculata_contig12127.1347.1 ID=prot_H-paniculata_contig12127.1347.1|Name=mRNA_H-paniculata_contig12127.1347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=330bp
MPRFTRRSCFGGRCAGAGKFYSGATVSHDPERVQGLASMRRPSTAGELVQ
FLQASNWMRTSVPELAVVVEPMREMLETFLNNTCRTRCAADEITIKRGDW
TEERAAAWETATERVSEAVPLYHPRADRSVLIFPDANDRFWGSCVTQVPS
EELSAGGDEAEMSHEPLAFLSGAFKGAQRRWPVPRMAPVTRVYMLPMQDD
VAPAVDTLDGYKYVLAIEDDLNGFVWLAPAKACTANFTVEQLVKWCAIFG
APRTWVSDNAAHFKNRVLRKTAVTLGIHRQFSVADSAWTNSTVERTMHEV
LMALNTALAEGGKPLEEWITVVPAVQWALN
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mRNA from alignment at H-paniculata_contig12127:553..1806-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12127.1347.1 ID=mRNA_H-paniculata_contig12127.1347.1|Name=mRNA_H-paniculata_contig12127.1347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1254bp|location=Sequence derived from alignment at H-paniculata_contig12127:553..1806- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCACGGTTTACAAGGCGAAGCTGTTTCGGCGGGAGATGCGCTGGTGC GGGAAAATTTTACTCGGGGGCGACGGTCTCTCATGATCCGGAGCGAGTAC AGGGTTTGGCTTCCATGCGCCGGCCTAGCACGGCAGGGGAGCTGGTGCAG TTTCTCCAGGCGTCAAATTGGATGAGAACGTCGGTGCCAGAGCTGGCTGT GGTGGTGGAGCCTATGCGTGAGATGCTGGAGACGTTTCTGAACAACACGT GCCGGACGCGGTGTGCGGCGGACGAGATAACCATAAAAAGAGGAGACTGG ACAGAGGAACGCGCGGCGGCGTGGGAGACGGCGACGGAGCGCGTCTCCGA GGCCGTGCCGCTATACCATCCGCGGGCGGACCGTAGTGTGCTGATCTTTC CTGACGCAAACGATAGGTTTTGGGGAAGCTGCGTGACGCAGGTACCATCG GAGGAACTGAGCGCAGGCGGCGACGAGGCGGAAATGAGTCATGAGCCGCT AGCATTTTTGAGTGGAGCATTCAAGGGGGCCCAGCGGAGGTGGCCGGTGG TGGATAAGGAGGCGTATGCCATCGTGTCAACGTTCTTGAGACTACCGTAC ATGATCTGGGACGGTGTGCATATATTCTGCGACCATCGGAATCTGGCATA CATTTTTCATCCAGAGGCATGCGCGGTGCCCACCACGTCTAAGACCACGG CCCAGCGGCTGCAGCGGTGGAGCGCTTTTCTTTGACAATTTCAGTACACC GTCGTGCACATCCCCGGCGAACAGAATAGTTGGGGAGATTTATTTTCAAG GTGGGTTCAGGAGCCGAGGATGGCGCCGGTGACGCGGGTGTACATGCTAC CCATGCAGGACGATGTTGCACCGGCGGTGGATACGTTGGACGGATACAAG TACGTCCTGGCAATCGAGGACGACCTTAACGGATTCGTGTGGTTGGCGCC AGCAAAGGCGTGTACCGCGAATTTTACGGTCGAACAGCTGGTGAAGTGGT GCGCGATTTTTGGTGCGCCCCGCACGTGGGTCAGCGACAATGCGGCGCAT TTCAAGAATCGTGTGCTGCGGAAGACCGCGGTGACGCTAGGGATTCACCG TCAATTCTCGGTCGCCGACTCCGCGTGGACGAATAGCACTGTCGAGCGGA CGATGCACGAAGTGCTTATGGCGCTGAACACGGCGTTGGCGGAGGGAGGC AAGCCGTTGGAGGAGTGGATCACGGTTGTGCCGGCGGTGCAATGGGCGCT CAAC
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Coding sequence (CDS) from alignment at H-paniculata_contig12127:553..1806-

>mRNA_H-paniculata_contig12127.1347.1 ID=mRNA_H-paniculata_contig12127.1347.1|Name=mRNA_H-paniculata_contig12127.1347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1980bp|location=Sequence derived from alignment at H-paniculata_contig12127:553..1806- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCACGGTTTACAAGGCGAAGCTGTTTCGGCGGGAGATGCGCTGGTGC
GGGAAAATTTTACTCGGGGGCGACGGTCTCTCATGATCCGGAGCGAGTAC
AGGGTTTGGCTTCCATGCGCCGGCCTAGCACGGCAGGGGAGCTGGTGCAG
TTTCTCCAGGCGTCAAATTGGATGAGAACGTCGGTGCCAGAGCTGGCTGT
GGTGGTGGAGCCTATGCGTGAGATGCTGGAGACGTTTCTGAACAACACGT
GCCGGACGCGGTGTGCGGCGGACGAGATAACCATAAAAAGAGGAGACTGG
ACAGAGGAACGCGCGGCGGCGTGGGAGACGGCGACGGAGCGCGTCTCCGA
GGCCGTGCCGCTATACCATCCGCGGGCGGACCGTAGTGTGCTGATCTTTC
CTGACGCAAACGATAGGTTTTGGGGAAGCTGCGTGACGCAGGTACCATCG
GAGGAACTGAGCGCAGGCGGCGACGAGGCGGAAATGAGTCATGAGCCGCT
AGCATTTTTGAGTGGAGCATTCAAGGGGGCCCAGCGGAGGTGGCCGGTGA
TGCCACGGTTTACAAGGCGAAGCTGTTTCGGCGGGAGATGCGCTGGTGCG
GGAAAATTTTACTCGGGGGCGACGGTCTCTCATGATCCGGAGCGAGTACA
GGGTTTGGCTTCCATGCGCCGGCCTAGCACGGCAGGGGAGCTGGTGCAGT
TTCTCCAGGCGTCAAATTGGATGAGAACGTCGGTGCCAGAGCTGGCTGTG
GTGGTGGAGCCTATGCGTGAGATGCTGGAGACGTTTCTGAACAACACGTG
CCGGACGCGGTGTGCGGCGGACGAGATAACCATAAAAAGAGGAGACTGGA
CAGAGGAACGCGCGGCGGCGTGGGAGACGGCGACGGAGCGCGTCTCCGAG
GCCGTGCCGCTATACCATCCGCGGGCGGACCGTAGTGTGCTGATCTTTCC
TGACGCAAACGATAGGTTTTGGGGAAGCTGCGTGACGCAGGTACCATCGG
AGGAACTGAGCGCAGGCGGCGACGAGGCGGAAATGAGTCATGAGCCGCTA
GCATTTTTGAGTGGAGCATTCAAGGGGGCCCAGCGGAGGTGGCCGGTGCC
GAGGATGGCGCCGGTGACGCGGGTGTACATGCTACCCATGCAGGACGATG
TTGCACCGGCGGTGGATACGTTGGACGGATACAAGTACGTCCTGGCAATC
GAGGACGACCTTAACGGATTCGTGTGGTTGGCGCCAGCAAAGGCGTGTAC
CGCGAATTTTACGGTCGAACAGCTGGTGAAGTGGTGCGCGATTTTTGGTG
CGCCCCGCACGTGGGTCAGCGACAATGCGGCGCATTTCAAGAATCGTGTG
CTGCGGAAGACCGCGGTGACGCTAGGGATTCACCGTCAATTCTCGGTCGC
CGACTCCGCGTGGACGAATAGCACTGTCGAGCGGACGATGCACGAAGTGC
TTATGGCGCTGAACACGGCGTTGGCGGAGGGAGGCAAGCCGTTGGAGGAG
TGGATCACGGTTGTGCCGGCGGTGCAATGGGCGCTCAACCCGAGGATGGC
GCCGGTGACGCGGGTGTACATGCTACCCATGCAGGACGATGTTGCACCGG
CGGTGGATACGTTGGACGGATACAAGTACGTCCTGGCAATCGAGGACGAC
CTTAACGGATTCGTGTGGTTGGCGCCAGCAAAGGCGTGTACCGCGAATTT
TACGGTCGAACAGCTGGTGAAGTGGTGCGCGATTTTTGGTGCGCCCCGCA
CGTGGGTCAGCGACAATGCGGCGCATTTCAAGAATCGTGTGCTGCGGAAG
ACCGCGGTGACGCTAGGGATTCACCGTCAATTCTCGGTCGCCGACTCCGC
GTGGACGAATAGCACTGTCGAGCGGACGATGCACGAAGTGCTTATGGCGC
TGAACACGGCGTTGGCGGAGGGAGGCAAGCCGTTGGAGGAGTGGATCACG
GTTGTGCCGGCGGTGCAATGGGCGCTCAAC
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