mRNA_H-paniculata_contig1212.1343.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1212.1343.1
Unique NamemRNA_H-paniculata_contig1212.1343.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1212.1343.1 vs. uniprot
Match: D7FJG8_ECTSI (UDP-galactose translocator, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG8_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 6.220e-128
Identity = 219/334 (65.57%), Postives = 253/334 (75.75%), Query Frame = 2
Query:  158 ISRKGGVFMILLALQFGCQPLLQKACIPKNEVNRISLILAIEVTKISLCAVVILSLGLKACRSMIESWTLRRSLQAAAVPAAGYALQNWLTQCAYANLDSLTFNLLNQTKTLFAALCLYLVMGKRQSRTQLVALSLLLGAALLLNAGNHDNGNSNXXXXGGLLVNSGDGVGTFERLWLGVLPVLCASFLSGLFGVVTQRTLQ-TGYNSFQLSLELAVYGAASVLLAYALG----DASYSGGTQGLFQGWTPLTFVPVLSQAAGGVIVGQVTKHAGSVQKGFSLIAGILVTAVVQIIVEDSKLTRRQWTAAALVAGATYLHANFPYRQLEKHTKI 1144
            +SRKG +FM +LALQFG QP+LQKAC+ K+ V+R+SLI+  E+TKI+LC  VI S G K  R M+ESWTLR SL+AAA+PAAGYALQNWL+Q AY NLDSLTFNLLNQTKTLFAALCLYLVMGK+QSR QLVALSLLL AALLLN+G+    +       GLL +  +      RLWLGVLPV+ A+ +SGL G VTQRTLQ +G NS QLSLELAVYG  ++LL    G    DA  S G    FQGWT  T VPVLSQAAGG+IVGQVTKHAGSVQKGF+LI GILVTA VQ  +E S LT   WTAAALVAG TYLHANFP++  +K  K+
Sbjct:   11 VSRKGRIFMGMLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKITLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLLAAALLLNSGSSGGDSKAGTGERGLLTSEAE---DSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNSSQLSLELAVYGVLTLLLTSGSGIGGSDAVTSAGRSSAFQGWTKWTCVPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTAAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEKM 341          
BLAST of mRNA_H-paniculata_contig1212.1343.1 vs. uniprot
Match: A0A835YXE8_9STRA (Putative UDP-galactose translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE8_9STRA)

HSP 1 Score: 297 bits (761), Expect = 6.010e-95
Identity = 183/333 (54.95%), Postives = 234/333 (70.27%), Query Frame = 2
Query:  137 ETSSSEMIS-RKGGVFMILLALQFGCQPLLQKACIPKNEVNRISLILAIEVTKISLCAVVILSL-GLKACRSMIESWTLRRSLQAAAVPAAGYALQNWLTQCAYANLDSLTFNLLNQTKTLFAALCLYLVMGKRQSRTQLVALSLLLGAALLLNAGNHDNGNSNXXXXGGLLVNSGDGVGTFERLW-LGVLPVLCASFLSGLFGVVTQRTLQT-GYNSFQLSLELAVYGAASVLLAYALGDASYSGGTQGLFQGWTPLTFVPVLSQAAGGVIVGQVTKHAGSVQKGFSLIAGILVTAVVQIIVEDSKLTRRQWTAAALVAGATYLHANFPYRQ 1123
            E  SSE I+ R+G VFM LLALQ+G QPL+QK+CI ++ VN++SL++A E+TKI++C   ILS  GL +   +  +WTLR S++AAA+PAA YALQNWLTQ  Y NLDSLTFNLLNQTKTL AA+CL+L+MG+RQS  Q++AL +L+ AALLLNA             GGL    GD        W LG+LPV+ AS LSG    VTQ++LQ  G NSF LS ELAVYG  ++LL      A+ +G  QGL++GWT  T +PV++ A GGVIVGQVTKHAGSV+KGF+LI GILVTA  Q I+E   L+R  + +A LVA +T+LH  +P +Q
Sbjct:    9 ERQSSEAINPRRGYVFMALLALQYGLQPLIQKSCIDRHAVNKVSLVVATEITKIAMCCGFILSTTGLVS--ELRATWTLRSSVKAAALPAACYALQNWLTQIGYMNLDSLTFNLLNQTKTLSAAVCLFLIMGRRQSGPQVLALMMLVAAALLLNA-----------QSGGL----GDAAAPIS--WELGILPVVGASLLSGFSAAVTQKSLQERGRNSFLLSAELAVYGVLTLLLP----SAASTGSLQGLWEGWTIRTVIPVVTNAMGGVIVGQVTKHAGSVKKGFALIGGILVTAAAQFILERQPLSREHYASAVLVAVSTFLHTRYPQQQ 318          
BLAST of mRNA_H-paniculata_contig1212.1343.1 vs. uniprot
Match: A0A835YMG2_9STRA (Putative UDP-galactose translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG2_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.240e-89
Identity = 168/319 (52.66%), Postives = 220/319 (68.97%), Query Frame = 2
Query:  182 MILLALQFGCQPLLQKACIPKNEVNRISLILAIEVTKISLCAVVILSLGLKACRSMIESWTLRRSLQAAAVPAAGYALQNWLTQCAYANLDSLTFNLLNQTKTLFAALCLYLVMGKRQSRTQLVALSLLLGAALLLNAGNHDNGNSNXXXXGGLLVNSGDGVGTFERLW-LGVLPVLCASFLSGLFGVVTQRTLQT-GYNSFQLSLELAVYGAASVLLAYALGDASYS---GGT--QGLFQGWTPLTFVPVLSQAAGGVIVGQVTKHAGSVQKGFSLIAGILVTAVVQIIVEDSKLTRRQWTAAALVAGATYLHANFPY 1117
            M+LLALQFG QPL+QK+CI + EVNR+SL++A E+TK+++C  V++S G  A   +  SWTL+ S++AAA+PAA YALQNWL Q AY NLDSLT+NLLNQTKTL AALCLY+VMG+RQS  Q+VAL++L+ AALLLN+                   + D  G     W LGV+PV+ AS LSG    VTQ++LQ  G NS+ LS EL +YG  ++L+     +       GG    GL++GWTP T +PV +QAAGGV+VGQVTKHAGSV+KGF+L+ GILVTA  Q ++E   L+   + +A LVA +T LHA +PY
Sbjct:    1 MLLLALQFGLQPLVQKSCINREEVNRVSLVMATELTKVAICLSVMVSSGFLA--DIQSSWTLKSSMKAAALPAALYALQNWLIQIAYMNLDSLTYNLLNQTKTLSAALCLYVVMGRRQSGPQIVALAMLVAAALLLNS-----------------RTASDKDGASGISWELGVVPVMGASLLSGFSAAVTQKSLQERGRNSYLLSAELGLYGIVTLLVTTLAAEGGVQVRRGGMLRDGLWRGWTPWTCLPVFTQAAGGVVVGQVTKHAGSVKKGFALVGGILVTAAAQYVLEREPLSPEHYVSAVLVALSTVLHARYPY 300          
BLAST of mRNA_H-paniculata_contig1212.1343.1 vs. uniprot
Match: A0A812JLU5_9DINO (ROCK1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JLU5_9DINO)

HSP 1 Score: 215 bits (548), Expect = 1.710e-62
Identity = 136/326 (41.72%), Postives = 200/326 (61.35%), Query Frame = 2
Query:  176 VFMILLALQFGCQPLLQKACIPKNEVNRISLILAIEVTKISLCAVVILSLGLK-ACRSMIESWTLRRSLQAAAVPAAGYALQNWLTQCAYANLDSLTFNLLNQTKTLFAALCLYLVMGKRQSRTQLVALSLLLGAALLLNAGNHDNGNSNXXXXGGLLVNSGDGVGTFERLWLGVLPVLCASFLSGLFGVVTQRTLQ--TGYNSFQLSLELAVYGAASVLLAYALGDASYSGGTQGLFQGWTPLTFVPVLSQAAGGVIVGQVTKHAGSVQKGFSLIAGILVTAVVQIIVEDSKLTRRQWTAAALVAGATYLHANFPYRQLEKHTKI 1144
            +F++LLA QFG QPLL K  +P+  V ++ L L+   +KI +  +++L    +     +  SW+LR S+  A +PA  +++Q WL Q   A++DSL+FNLLNQTKTL AAL  YL++GKRQSR Q  AL LL  +ALLL      + +S              G    +  + GVLPV+ A+  SGL   +TQRTL+   G NS+  S+EL+++G+A +L        +     QG +QGW+ L+ +PV++QA GG++VG VTK++ SV+KGF+L++GI++T + Q ++ED+ LT     AA LVA +T LHA FP  QL K   I
Sbjct:   56 LFLVLLAAQFGLQPLLTKQLLPRGHVPQVFL-LSSNFSKILISLLILLFGNTRDEVADIARSWSLRESVLKAGLPAIMFSMQGWLLQVGQAHIDSLSFNLLNQTKTLSAALMCYLLLGKRQSRVQCFALVLLFVSALLLGTKGFSSKSSRDTA----------GADAGDAFFFGVLPVVTAALSSGLTAAMTQRTLKGAQGRNSWLYSMELSMWGSACLLAGVCFSSDARGRLVQGPYQGWSALSVLPVMTQAVGGILVGLVTKYSDSVKKGFALVSGIVLTTLAQAVLEDAPLTSGHLIAAVLVAISTVLHAEFPPVQLRKAKSI 370          
BLAST of mRNA_H-paniculata_contig1212.1343.1 vs. uniprot
Match: A0A7S1UAC1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAC1_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.570e-60
Identity = 146/342 (42.69%), Postives = 195/342 (57.02%), Query Frame = 2
Query:  167 KGGVFMILLALQFGCQPLLQKACIPKNEVNRISLILAIEVTKISLCAVVILSLGL------KACRSMIESWTLRRSLQAAAVPAAGYALQNWLTQCAYANLDSLTFNLLNQTKTLFAALCLYLVMGKRQSRTQLVALSLLLGAALLLNAGNHDNGNSNXXXXGGLLVNSGDGVGTFER---LWLGVLPVLCASFLSGLFGVVTQRTLQTGYNSFQLSLELAVYGAASVLLAYALG------DASYSGGTQGLFQGWTPLTFVPVLSQAAGGVIVGQVTKHAGSVQKGFSLIAGILVTAVVQIIVEDSKLTRRQWTAAALVAGATYLHANFPYRQLEKHTKID 1147
            +G + ++ LALQFG QP L K  I K +V + S+++  E TKI LC   +L  GL      +  R + +SW+LR +L    VPA  Y++QN L Q  Y  LD+LTFNLLNQ KT+FAA+CL+LV+GKRQS  Q+VAL +L+ AA++LN                L    GD      R     LG LPVL AS +SG     TQ+ L    NS+  S+ELAV G  S LLA  L       +   +G    L  G      +PVLS AAGG++VG V K+AG V+KGF L+ GIL T +VQ IVE + +T  Q+ A+ LV G+ YLH N+P++ +    K D
Sbjct:    4 RGYLALLGLALQFGLQPFLSKRYIGK-DVLKPSVVMLTESTKIVLCLTCLLVEGLLQKQRFQNLRDIAKSWSLRNALYCVVVPAVLYSIQNILVQSGYQYLDALTFNLLNQCKTIFAAVCLFLVLGKRQSFLQVVALLMLVTAAIILN----------------LDKVGGDAEAVASRDEWFQLGFLPVLLASLISGFTTAFTQKILTEKRNSYLFSMELAVIGIIS-LLAKELSSGVEGQEVLRTGNIAPLLVGMDAYVMLPVLSSAAGGIVVGLVVKYAGGVRKGFGLVLGILFTGLVQSIVEGTSITGLQYAASGLVVGSMYLHTNYPWKPVAPAKKDD 327          
BLAST of mRNA_H-paniculata_contig1212.1343.1 vs. uniprot
Match: A0A812QLI2_9DINO (ROCK1 protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812QLI2_9DINO)

HSP 1 Score: 207 bits (527), Expect = 2.130e-59
Identity = 134/323 (41.49%), Postives = 200/323 (61.92%), Query Frame = 2
Query:  176 VFMILLALQFGCQPLLQKACIPKNEVNRISLILAIEVTKISLCAVVILSLG--LKACRSMIESWTLRRSLQAAAVPAAGYALQNWLTQCAYANLDSLTFNLLNQTKTLFAALCLYLVMGKRQSRTQLVALSLLLGAALLLNAGNHDNGNSNXXXXGGLLVNSGDGVGTFERLWLGVLPVLCASFLSGLFGVVTQRTLQ--TGYNSFQLSLELAVYGAASVLLAYALGDASYSGGTQGLFQGWTPLTFVPVLSQAAGGVIVGQVTKHAGSVQKGFSLIAGILVTAVVQIIVEDSKLTRRQWTAAALVAGATYLHANFPYRQLEK 1132
            +F++LLA QFG QPLL K  +P+  + ++ L L+   +KI L ++ IL  G        ++ +W+LR S+  A +PA  +++Q WL Q   A++DSL+FNLLNQTKTL AAL  YL++G+RQSR Q  AL LL  +ALLL      +   +    G             +    GVLPV+ A+  SGL   +TQRTL+   G NS+  S+EL+++G+A ++    + D       QG +QGW+ L+ VPVL+QA GG++VG VTK++ SV+KGF+L++GI++T + Q ++ED+ LT     AA LVA +T LHA +P  QL++
Sbjct:   56 LFLVLLAAQFGLQPLLSKQLLPRGHLPQVFL-LSSNFSKI-LISLFILMFGNTRDEIADIVRAWSLRESILKAGIPAIMFSMQGWLLQVGQAHVDSLSFNLLNQTKTLSAALMCYLLLGRRQSRIQCFALVLLFVSALLLGTKGCSSFKKHSARDGS----------ASDAFVFGVLPVVVAALSSGLTAAMTQRTLKGSAGRNSWLYSMELSMWGSACLIAGVCISDKR-GRLLQGPYQGWSALSVVPVLTQAVGGILVGLVTKYSDSVKKGFALVSGIVLTTLAQCVLEDAPLTSWHLIAAVLVAISTVLHAQYPPVQLQR 365          
BLAST of mRNA_H-paniculata_contig1212.1343.1 vs. uniprot
Match: W7THR3_9STRA (Nucleotide-sugar transporter n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THR3_9STRA)

HSP 1 Score: 206 bits (525), Expect = 5.070e-59
Identity = 144/337 (42.73%), Postives = 205/337 (60.83%), Query Frame = 2
Query:  113 GRVNQAVAETSSSEMISRKGGVFMILLALQFGCQPLLQKACIPKNEVNRISLILAIEVTKISLCAVVILSLGLKACRSMI-ESWTLRRSLQAAAVPAAGYALQNWLTQCAYANLDSLTFNLLNQTKTLFAALCLYLVMGKRQSRTQLVALSLLLGAALLLNAGNHDNGNSNXXXXGGLLVNSGDGVGTFERLWLGVLPVLCASFLSGLFGVVTQRTLQ-TGYNSFQLSLELAVYGAA--SVLLAYALGDASYSGGTQGLFQGWTPLTFVPVLSQAAGGVIVGQVTKHAGSVQKGFSLIAGILVTAVVQIIVEDSKLTRRQWTAAALVAGATYLHANF 1111
            G    +V+ T S   + + G  +M LLALQFG QPLL +A IP   + ++ +++A E  KI LCA+ +     K  R+ +  +WT+R SL+ AA+PA+ YALQN + Q  Y  LDSL+FNLLNQTKTL AA+CLY+VMG++Q+  QLVAL +LL A+++LN  +    +S                       LGVLPVL AS  SG+   +TQ+TLQ    NS+  S ELA+YG    SV++      +S    +  L +  +PL  +PV+  AAGG+IVG VTK+AG V+KGF+LIAGI +TA+ Q +++ +  +R    AA LV  +T+LHA +
Sbjct:   39 GHRTSSVSRTGS---VFQSGYFYMSLLALQFGLQPLLVRAFIP-TSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILNWPSASPASSPSYDP--------------TTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVVSKYFFSSPGTSSLSLPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLVGYSTFLHAKY 357          
BLAST of mRNA_H-paniculata_contig1212.1343.1 vs. uniprot
Match: UPI0009F3639C (UDP-N-acetylglucosamine transporter ROCK1 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F3639C)

HSP 1 Score: 196 bits (497), Expect = 1.730e-55
Identity = 129/336 (38.39%), Postives = 196/336 (58.33%), Query Frame = 2
Query:  128 AVAETSSSEMISRKGGVFMILLALQFGCQPLLQKACIPKNEVNRISLILAIEVTKISLCAVVILSLGLKACRSMIESWTLRRSLQAAAVPAAGYALQNWLTQCAYANLDSLTFNLLNQTKTLFAALCLYLVMGKRQSRTQLVALSLLLGAALLLNAGNHDNGNSNXXXXGGLLVNSGDGVGTFERLWLGVLPVLCASFLSGLFGVVTQRTLQTG-YNSFQLSLELAVYGAASVLLAYALGDASYSGGTQGLFQGWTPLTFVPVLSQAAGGVIVGQVTKHAGSVQKGFSLIAGILVTAVVQIIVEDSKLTRRQWTAAALVAGATYLHANFPYRQLEK 1132
            A+      + IS +  ++++LL LQ+G QPL  K  + K EV   S +LA EVTK+  CA+++L+    + + +   WTL  SL A+ +PAA YALQN L Q +Y NLDSLTF++LNQTK  F A+  YL++G++QS  Q+ ALSLL+ AA+LL+ G             G    SGD     + L+ G++PV+ AS LSGL   + Q   Q   + S+ +++E++V G+  +L +        +    G F GWTP T VPV+  A GG++VG VT HAG V+KGF +++ +LVTA++Q I +    +     A  LV  + +++  +PY   +K
Sbjct:    4 AIPVDQRKDRISARVWIYLLLLTLQYGAQPLFSKRFVGK-EVIVTSAVLACEVTKV-FCALILLAKE-GSLKKLFNQWTLMGSLTASGLPAAVYALQNSLLQISYKNLDSLTFSILNQTKLFFTAIFTYLILGQKQSVQQVGALSLLIIAAILLSVGE------------GSTKGSGD-KNADQVLFYGIVPVMVASVLSGLASSLCQWASQVKKHTSYLMTIEMSVVGSLCLLASLYKSPDGVAIKKHGFFYGWTPWTLVPVIFNAVGGILVGLVTAHAGGVRKGFVIVSALLVTALLQFIFDSKSPSLYCLAALPLVMSSIFIYQRYPYAARKK 323          
BLAST of mRNA_H-paniculata_contig1212.1343.1 vs. uniprot
Match: A0A1Z5JBF3_FISSO (Solute carrier family 35 (UDP-sugar transporter), member A1/2/3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBF3_FISSO)

HSP 1 Score: 194 bits (492), Expect = 1.590e-54
Identity = 140/344 (40.70%), Postives = 197/344 (57.27%), Query Frame = 2
Query:  143 SSSEMISRKGGVFMILLALQFGCQPLLQKACIPKNEVNRISLILAIEVTKISLCAVVILSLGLKACRSMIESWTLRRSLQAAAVPAAGYALQNWLTQCAYANLDSLTFNLLNQTKTLFAALCLYLVMGKRQSRTQLVALSLLLGAALLL---------------NAGNHDNGNSNXXXXGGLLVNSGDGVGTFERLWLGVLPVLCASFLSGLFGVVTQRTLQTGY-NSFQLSLELAVYGAASVLLAYALGDASYSGGT---QGLFQGWTPLTFVPVLSQAAGGVIVGQVTKHAGSVQKGFSLIAGILVTAVVQIIVE-DSKLTRRQWTAAALVAGATYLHANFP 1114
            SSS+ +SR+  V+++LLA+QFGCQP+L +   P   VNR +++L  E+ K  L A  +   G  A R   ++W++   L  A  PA  Y++QN  +  AY NLD+LTFN+LNQTKTL AALC YLVMGK QS+ Q+VAL LL  +AL++               N   H N              + D   T   L  GV P+L ASF+SGL G V Q+ LQTG  NS+Q S+EL +   A++L+       +  G      G +  WT  T++P+ + A GGV+VG VTK+AGSV KGF+LI G+L++ +VQ ++E D  ++  Q     L A + YLH+  P
Sbjct:   12 SSSDRLSRQAIVYLVLLAVQFGCQPILTRRFAPSG-VNRSTIVLMQELVKFFLAATFLFVSG--AARESWKNWSVISWLAVALFPALLYSVQNLASIMAYQNLDALTFNVLNQTKTLSAALCTYLVMGKTQSQWQIVALFLLFLSALVMEGIVPVDALLGSFRTNYSQHTN-------------RTKDRFNT-HHLTYGVAPLLLASFISGLAGAVAQKNLQTGARNSYQFSMELCI---ATILILTGSLLVAPDGRMILEHGFWHNWTLWTWIPIFTNAIGGVLVGLVTKYAGSVSKGFALIFGMLLSGMVQAMIEPDIGVSAGQVVGGLLAATSLYLHSTNP 335          
BLAST of mRNA_H-paniculata_contig1212.1343.1 vs. uniprot
Match: A0A1Q9CRA3_SYMMI (DNA helicase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CRA3_SYMMI)

HSP 1 Score: 204 bits (520), Expect = 4.310e-54
Identity = 136/326 (41.72%), Postives = 200/326 (61.35%), Query Frame = 2
Query:  143 SSSEMISRKGGV-FMILLALQFGCQPLLQKACIPKNEVNRISLILAIEVTKISLCAVVILSLG--LKACRSMIESWTLRRSLQAAAVPAAGYALQNWLTQCAYANLDSLTFNLLNQTKTLFAALCLYLVMGKRQSRTQLVALSLLLGAALLLNAGNHDNGNSNXXXXGGLLVNSGDGVGTFERLWLGVLPVLCASFLSGLFGVVTQRTLQ--TGYNSFQLSLELAVYGAASVLLAYALGDASYSGGTQGLFQGWTPLTFVPVLSQAAGGVIVGQVTKHAGSVQKGFSLIAGILVTAVVQIIVEDSKLTRRQWTAAALVAGATYLHA 1105
            S   MIS+   + F++LLA QFG QPLL K  +P+  + ++ L L+   +KI L ++ IL  G        ++ +W+LR S+  A +PA  +++Q WL Q   A++DSL+FNLLNQTKTL AAL  YL++G+RQSR Q  AL LL  +ALLL      +   +    G             +    GVLPV+ A+  SGL   +TQRTL+   G NS+  S+EL+++G+A ++    + D       QG +QGW+ L+ VPVL+QA GG++VG VTK++ SV+KGF+L++GI++T + Q ++ED+ LT    TAA LVA +T LHA
Sbjct:  730 SLRHMISKNSSLLFLVLLAAQFGLQPLLSKQLLPRGHLPQVFL-LSSNFSKI-LISLSILMFGNTRDEIADIVRAWSLRESILKAGIPAIMFSMQGWLLQVGQAHIDSLSFNLLNQTKTLSAALMCYLLLGRRQSRIQCFALVLLFVSALLLGTKGCSSFKKHSLRDGS----------ASDAFVFGVLPVVVAALSSGLTAAMTQRTLKGSAGRNSWLYSMELSMWGSACLIAGVCMSDKR-GRLLQGPYQGWSALSVVPVLTQAVGGILVGLVTKYSDSVKKGFALVSGIVLTTLAQCVLEDAPLTSWHLTAAVLVAISTVLHA 1042          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1212.1343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJG8_ECTSI6.220e-12865.57UDP-galactose translocator, putative n=2 Tax=Ectoc... [more]
A0A835YXE8_9STRA6.010e-9554.95Putative UDP-galactose translocator n=1 Tax=Tribon... [more]
A0A835YMG2_9STRA1.240e-8952.66Putative UDP-galactose translocator n=1 Tax=Tribon... [more]
A0A812JLU5_9DINO1.710e-6241.72ROCK1 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A7S1UAC1_9STRA2.570e-6042.69Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A812QLI2_9DINO2.130e-5941.49ROCK1 protein n=4 Tax=Symbiodinium TaxID=2949 RepI... [more]
W7THR3_9STRA5.070e-5942.73Nucleotide-sugar transporter n=2 Tax=Nannochlorops... [more]
UPI0009F3639C1.730e-5538.39UDP-N-acetylglucosamine transporter ROCK1 n=1 Tax=... [more]
A0A1Z5JBF3_FISSO1.590e-5440.70Solute carrier family 35 (UDP-sugar transporter), ... [more]
A0A1Q9CRA3_SYMMI4.310e-5441.72DNA helicase n=1 Tax=Symbiodinium microadriaticum ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1212contigH-paniculata_contig1212:24..2491 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score387.5
Seed ortholog evalue6.6e-105
Seed eggNOG ortholog2880.D7FJG8
KEGG koko:K15272
KEGG TC2.A.7.12
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005338,GO:0005342,GO:0005463,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006810,GO:0006811,GO:0006820,GO:0007275,GO:0008150,GO:0008509,GO:0008514,GO:0009555,GO:0009653,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010208,GO:0010584,GO:0010605,GO:0010927,GO:0012505,GO:0015075,GO:0015136,GO:0015165,GO:0015318,GO:0015711,GO:0015739,GO:0015780,GO:0015789,GO:0015849,GO:0015931,GO:0015932,GO:0016043,GO:0019222,GO:0022607,GO:0022857,GO:0030162,GO:0030198,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0032268,GO:0032269,GO:0032434,GO:0032435,GO:0032501,GO:0032502,GO:0032989,GO:0034220,GO:0042176,GO:0042177,GO:0043062,GO:0043086,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044092,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0045861,GO:0046942,GO:0046943,GO:0048229,GO:0048509,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051341,GO:0051354,GO:0055085,GO:0060255,GO:0061136,GO:0065007,GO:0065009,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0085029,GO:0090481,GO:0098656,GO:1901264,GO:1901505,GO:1901799,GO:1902183,GO:1903050,GO:1903051,GO:1903069,GO:1903070,GO:1903362,GO:1903363,GO:1903573,GO:1903825,GO:1903856,GO:1903857,GO:1904292,GO:1904293,GO:1905039,GO:1905897,GO:1990569,GO:2000058,GO:2000059
EggNOG free text desc.pyrimidine nucleotide-sugar transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG2234@2759
Ec32 ortholog descriptionNucleotide-sugar transporter
Ec32 orthologEc-14_006310.1
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons4
Model size1302
Cds size1041
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1212.1343.1prot_H-paniculata_contig1212.1343.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1212 176..2382 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928930.5176423-UTR-H-paniculata_contig1212:23..1751622928930.5176423-UTR-H-paniculata_contig1212:23..175Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1212 24..175 -
1691480671.760795-UTR-H-paniculata_contig1212:23..1751691480671.760795-UTR-H-paniculata_contig1212:23..175Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1212 24..175 -
1622928930.6852288-UTR-H-paniculata_contig1212:2382..24911622928930.6852288-UTR-H-paniculata_contig1212:2382..2491Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1212 2383..2491 -
1691480671.8138292-UTR-H-paniculata_contig1212:2382..24911691480671.8138292-UTR-H-paniculata_contig1212:2382..2491Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1212 2383..2491 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928930.540329-CDS-H-paniculata_contig1212:175..2711622928930.540329-CDS-H-paniculata_contig1212:175..271Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1212 176..271 -
1691480671.7728832-CDS-H-paniculata_contig1212:175..2711691480671.7728832-CDS-H-paniculata_contig1212:175..271Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1212 176..271 -
1622928930.634081-CDS-H-paniculata_contig1212:461..5661622928930.634081-CDS-H-paniculata_contig1212:461..566Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1212 462..566 -
1691480671.783984-CDS-H-paniculata_contig1212:461..5661691480671.783984-CDS-H-paniculata_contig1212:461..566Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1212 462..566 -
1622928930.6523628-CDS-H-paniculata_contig1212:901..15081622928930.6523628-CDS-H-paniculata_contig1212:901..1508Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1212 902..1508 -
1691480671.792754-CDS-H-paniculata_contig1212:901..15081691480671.792754-CDS-H-paniculata_contig1212:901..1508Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1212 902..1508 -
1622928930.6640472-CDS-H-paniculata_contig1212:2149..23821622928930.6640472-CDS-H-paniculata_contig1212:2149..2382Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1212 2150..2382 -
1691480671.8050413-CDS-H-paniculata_contig1212:2149..23821691480671.8050413-CDS-H-paniculata_contig1212:2149..2382Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1212 2150..2382 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1212.1343.1

>prot_H-paniculata_contig1212.1343.1 ID=prot_H-paniculata_contig1212.1343.1|Name=mRNA_H-paniculata_contig1212.1343.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=347bp
MGRVNQAVAETSSSEMISRKGGVFMILLALQFGCQPLLQKACIPKNEVNR
ISLILAIEVTKISLCAVVILSLGLKACRSMIESWTLRRSLQAAAVPAAGY
ALQNWLTQCAYANLDSLTFNLLNQTKTLFAALCLYLVMGKRQSRTQLVAL
SLLLGAALLLNAGNHDNGNSNSSSGGGLLVNSGDGVGTFERLWLGVLPVL
CASFLSGLFGVVTQRTLQTGYNSFQLSLELAVYGAASVLLAYALGDASYS
GGTQGLFQGWTPLTFVPVLSQAAGGVIVGQVTKHAGSVQKGFSLIAGILV
TAVVQIIVEDSKLTRRQWTAAALVAGATYLHANFPYRQLEKHTKID*
back to top

mRNA from alignment at H-paniculata_contig1212:24..2491-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1212.1343.1 ID=mRNA_H-paniculata_contig1212.1343.1|Name=mRNA_H-paniculata_contig1212.1343.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2468bp|location=Sequence derived from alignment at H-paniculata_contig1212:24..2491- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAAGCCACTTTTTCCTCGGTGGTATGGACCTTGTTGCTGTTAGAATCTT TTAGTCCTTCAAGTAACAGTTACTGTAAATAAACTGTAGCTATACCGTGT TTGGACAGCATGGGGAGAGTAAACCAAGCAGTGGCGGAGACCTCTAGTAG TGAGATGATCAGTCGTAAGGGTGGTGTATTCATGATATTGCTGGCTCTAC AATTTGGCTGCCAGCCTTTGCTGCAGAAGGCGTGCATCCCTAAAAATGAG GTCAATCGGATATCCTTGATTCTCGCTATAGAAGTGACCAAGATTTCCCT TTGCGCTGTCGTCATACTGTCTTTGGGACTGAAGGCGTGCAGGTGCGAGC ACTCCCTGCTATAGCATACACCGTTAGGGCGGGTTACCATTGCTTACAAG GATATACACGTTTTGCCAAACGTGGTATTCCAGAGTACTCAACTTGCCTT TTCGTACAAATATTAGGGCACGGTAATCGGATAGCAATTCGGAATCCGGT CAACATGGTCAACATATCAGTTCTCCCTCCCGTCGGTACGAGTGATGAGT ACAAATAATGAAATAATGGGATAGACGAATCTATGTCCGAGGTAGTGCCC GACACGTTTAGAAACTCAGGCCCAGTTGTTGGACTTCAATCAAAAATTGT GCCCGAGGAACGCTACTTACGTTTCAGGCATGCATAGGAATACAAGGCAT TGGAAGCATGGAGGAGGTGTAGGGTGGTGCCTGCTGCCTCATTAAGAAAA CGCCGGTGACAGTGTAGTAGGCGAAATGATACATCGTAAGATACACCCCC CTAGAGCAATCTGCCTCGTTCCTCCTGCAGAAGATCGCAACACTCCCCTT ATTATGGCAGAAGGTTCGAGCGATAGTGCTGACTATTATAGAGGGTTAGC TATAATACCTGGCACGTATCGAACAGTAATGCATGTACTGTGTGCCCTGC GGCGTACGCCCGCGGCTGCCGTATGCTTGACAGATCTATGATCGAGTCGT GGACGCTGCGTAGGAGCTTACAAGCAGCAGCAGTCCCCGCAGCAGGGTAT GCACTCCAAAATTGGTTGACGCAGTGTGCCTACGCCAACCTGGACTCGTT AACGTTCAACTTGCTCAACCAAACGAAGACGCTCTTTGCCGCCCTTTGCC TGTACCTGGTCATGGGCAAGCGCCAATCGCGGACACAGCTTGTCGCGCTT TCACTCTTGCTTGGGGCGGCGCTTCTCCTTAACGCTGGCAATCACGACAA TGGTAATAGCAACTCCAGTAGCGGGGGTGGACTCCTCGTCAACTCTGGAG ACGGCGTTGGCACGTTTGAGCGATTGTGGCTGGGAGTATTGCCTGTGTTG TGTGCGTCGTTTTTGTCAGGCTTGTTTGGGGTAGTGACGCAACGCACCTT GCAGACAGGCTATAACAGCTTCCAGCTGTCCCTTGAGCTCGCGGTGTACG GGGCTGCTTCTGTACTTCTCGCTTATGCATTGGGAGATGCATCCTATTCT GGAGGGACACAAGGCTTGTTCCAAGGGTGGACGCCGTTGACGTTTGTGCC GGTGCTAAGTCAAGCCGCCGGTGGCGTTATCGTTGGCCAGGTAATCTCGA TAAATACATGCTGTGTATTGTGCACTTCAAGAGCTTCTCTTTTCGAACGA GTGTGTGGTTTTTGCGAGCGTGTGTGCCTTGGGTACAACTTGATTTTCGC ATCAAGTTATTGCAGGATTTTGCACGGGCTTGGGTGTCATCGGTTCAAAA AAACGTTGTGTCGACTTTTTCAAGGAAGCAATTTCCCGGTAAGGTCCGTC AAAAACGTATCTTAACCCTAAGTTATGTGTCTACCAGCGTACTCCTCCTT CTGCTTCCTTGTGAGCGCGCTTGATATCCCACATGAATCCTTATCGCTGG TGATGGTCAACACACCCAACCACAGGTTACTAAACATGCCGGAAGTGTGC AGAAGGGGTTCTCCTTGATAGCCGGCATCCTCGTCACGGCCGTGGTCCAG ATCATAGTGGAGGATTCTAAGCTCACAAGGGTAAGCACTGGGTGCAAGTT GGTGTATGATCACCAAAGGAGGGCGGGGTGGGGGAAGCTATTTTTTGCCA ACCTGTTCGTTCTCATTGGTCTATCCCAAATACCACTGCTTCGTAACTTC AAGTCGCTCAGTATCGAGCGTAAGTAATGCCTCACATTTGCTTTGCCCCT ACCCTCTTGTGCCTGAGCAGAGACAGTGGACGGCGGCAGCACTGGTGGCC GGAGCCACATACCTTCACGCCAACTTTCCGTATCGTCAGTTGGAAAAACA TACAAAAATTGACTAGCATCGTTCAACTTTCAAGATTATTGTGCCTGGCT GTTATAGTTGAGTCGAGTCAAATAATGCCAAATAGTCCACCACCACGGAC CTACGCCCGAACGGGTAGGGTAGCTCGTGAACTGAGCATGACTGGAAGTC TAGTCAGAGGTCTTTTAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1212:24..2491-

>mRNA_H-paniculata_contig1212.1343.1 ID=mRNA_H-paniculata_contig1212.1343.1|Name=mRNA_H-paniculata_contig1212.1343.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2082bp|location=Sequence derived from alignment at H-paniculata_contig1212:24..2491- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGAGAGTAAACCAAGCAGTGGCGGAGACCTCTAGTAGTGAGATGAT
CAGTCGTAAGGGTGGTGTATTCATGATATTGCTGGCTCTACAATTTGGCT
GCCAGCCTTTGCTGCAGAAGGCGTGCATCCCTAAAAATGAGGTCAATCGG
ATATCCTTGATTCTCGCTATAGAAGTGACCAAGATTTCCCTTTGCGCTGT
CGTCATACTGTCTTTGGGACTGAAGGCGTGCAGATGGGGAGAGTAAACCA
AGCAGTGGCGGAGACCTCTAGTAGTGAGATGATCAGTCGTAAGGGTGGTG
TATTCATGATATTGCTGGCTCTACAATTTGGCTGCCAGCCTTTGCTGCAG
AAGGCGTGCATCCCTAAAAATGAGGTCAATCGGATATCCTTGATTCTCGC
TATAGAAGTGACCAAGATTTCCCTTTGCGCTGTCGTCATACTGTCTTTGG
GACTGAAGGCGTGCAGATCTATGATCGAGTCGTGGACGCTGCGTAGGAGC
TTACAAGCAGCAGCAGTCCCCGCAGCAGGGTATGCACTCCAAAATTGGTT
GACGCAGTGTGCCTACGCCAACCTGGACTCGTTAACGTTCAACTTGCTCA
ACCAAACGAAGACGCTCTTTGCCGCCCTTTGCCTGTACCTGGTCATGGGC
AAGCGCCAATCGCGGACACAGCTTGTCGCGCTTTCACTCTTGCTTGGGGC
GGCGCTTCTCCTTAACGCTGGCAATCACGACAATGGTAATAGCAACTCCA
GTAGCGGGGGTGGACTCCTCGTCAACTCTGGAGACGGCGTTGGCACGTTT
GAGCGATTGTGGCTGGGAGTATTGCCTGTGTTGTGTGCGTCGTTTTTGTC
AGGCTTGTTTGGGGTAGTGACGCAACGCACCTTGCAGACAGGCTATAACA
GCTTCCAGCTGTCCCTTGAGCTCGCGGTGTACGGGGCTGCTTCTGTACTT
CTCGCTTATGCATTGGGAGATGCATCCTATTCTGGAGGGACACAAGGCTT
GTTCCAAGGGTGGACGCCGTTGACGTTTGTGCCGGTGCTAAGTCAAGCCG
CCGGTGGCGTTATCGTTGGCCAGATCTATGATCGAGTCGTGGACGCTGCG
TAGGAGCTTACAAGCAGCAGCAGTCCCCGCAGCAGGGTATGCACTCCAAA
ATTGGTTGACGCAGTGTGCCTACGCCAACCTGGACTCGTTAACGTTCAAC
TTGCTCAACCAAACGAAGACGCTCTTTGCCGCCCTTTGCCTGTACCTGGT
CATGGGCAAGCGCCAATCGCGGACACAGCTTGTCGCGCTTTCACTCTTGC
TTGGGGCGGCGCTTCTCCTTAACGCTGGCAATCACGACAATGGTAATAGC
AACTCCAGTAGCGGGGGTGGACTCCTCGTCAACTCTGGAGACGGCGTTGG
CACGTTTGAGCGATTGTGGCTGGGAGTATTGCCTGTGTTGTGTGCGTCGT
TTTTGTCAGGCTTGTTTGGGGTAGTGACGCAACGCACCTTGCAGACAGGC
TATAACAGCTTCCAGCTGTCCCTTGAGCTCGCGGTGTACGGGGCTGCTTC
TGTACTTCTCGCTTATGCATTGGGAGATGCATCCTATTCTGGAGGGACAC
AAGGCTTGTTCCAAGGGTGGACGCCGTTGACGTTTGTGCCGGTGCTAAGT
CAAGCCGCCGGTGGCGTTATCGTTGGCCAGGTTACTAAACATGCCGGAAG
TGTGCAGAAGGGGTTCTCCTTGATAGCCGGCATCCTCGTCACGGCCGTGG
TCCAGATCATAGTGGAGGATTCTAAGCTCACAAGGGTTACTAAACATGCC
GGAAGTGTGCAGAAGGGGTTCTCCTTGATAGCCGGCATCCTCGTCACGGC
CGTGGTCCAGATCATAGTGGAGGATTCTAAGCTCACAAGGAGACAGTGGA
CGGCGGCAGCACTGGTGGCCGGAGCCACATACCTTCACGCCAACTTTCCG
TATCGTCAGTTGGAAAAACATACAAAAATTGACTAGAGACAGTGGACGGC
GGCAGCACTGGTGGCCGGAGCCACATACCTTCACGCCAACTTTCCGTATC
GTCAGTTGGAAAAACATACAAAAATTGACTAG
back to top