mRNA_H-paniculata_contig1211.1338.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A6H5LM28_9PHAE (tRNA_edit domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LM28_9PHAE) HSP 1 Score: 293 bits (751), Expect = 6.330e-98 Identity = 150/229 (65.50%), Postives = 177/229 (77.29%), Query Frame = 1 Query: 1 VSSGFRQLLEHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISVPRDGQSAIVEDDGS 687 VS+ QL+ RA AIERRL+G+ PDL+DP+ERVKEHCHR A S+R+KWV YYDT LEERA ELG EQLCKTM+MENKA D +DPT RFY+VVVQYAA+LSSQK+S A+MR+ ++ SRGR NLQVAPEEV L+LSGFPHNGV+VFGGL P+PVI+S+AV+ LR F+W+G GHPLLKLGVST DLV LGA ADISVPRDG A ED+G+ Sbjct: 10 VSNQTLQLIARRAVAIERRLRGEPPDLTDPIERVKEHCHRAGATSVRYKWVPHGYYDTPLEERAKELGSEPEQLCKTMIMENKA--------FDENDPTMERFYLVVVQYAARLSSQKISAAVMRMM---KRSSRGRCNLQVAPEEVGLSLSGFPHNGVTVFGGLTPIPVILSEAVLALRPSFVWLGAGHPLLKLGVSTEDLVKKLGATVADISVPRDGPGA-AEDEGA 226
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A836CLD2_9STRA (YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD2_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.090e-46 Identity = 93/215 (43.26%), Postives = 125/215 (58.14%), Query Frame = 1 Query: 19 QLLEHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSS---QKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISVPRD 654 Q LE R I R QGD L+DPVERVK + S RFKWV P YYD SLEERA L C QL K+++ + A E S + + MV+VQY AK++ Q++ A++ + ++ R + +AP+E L L+GFPHNGVS FG L +P+++S A+ L +F+W+GGGH LK+GVS DLV L A AD+S PRD Sbjct: 19 QDLEARVATILRAQQGDKAALTDPVERVKAEAQKC--LSARFKWVEPTYYDKSLEERATILRCHPRQLTKSLLFKGNAGSEAAD-----SSGAAPVYMMVIVQYLAKINLKLLQEVGNALLAGRQGQK-----RLSFALAPDEEGLALTGFPHNGVSPFGSLCRVPMVLSSAIAELPEQFLWMGGGHTDLKIGVSVQDLVRALNAHVADVSEPRD 221
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A225UIC1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225UIC1_9STRA) HSP 1 Score: 148 bits (373), Expect = 7.340e-41 Identity = 85/210 (40.48%), Postives = 122/210 (58.10%), Query Frame = 1 Query: 28 EHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAAD-ISVPRD 654 + R A+ER L D + V+RVK H R + S K +YY +L +RA LGC LCK++++EN AC+ DP +SR+Y VV+QY AKL ++ L + P +++ ++ +FN Q AP +VS L+GF HNGVS FG P+PVI++ A+ L+ F+W+GGG +KL +S DLV LGA AD I+ RD Sbjct: 15 QKRLDALERSL-----DDLEGVKRVKSHLQREKLASAALKSAPSDYYTWTLAQRAKLLGCAVPHLCKSIIVENVACINS-----GVEDPLNSRYYCVVLQYNAKLDAELLRRFVRDNIPEKDRPAKKKFNFQHAPGDVSEELTGFGHNGVSTFGMKTPIPVIVAGAIAELKPSFLWLGGGAESVKLRISVQDLVKALGARVADGITTLRD 214
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A484EHU1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHU1_BRELC) HSP 1 Score: 147 bits (372), Expect = 1.160e-40 Identity = 87/209 (41.63%), Postives = 121/209 (57.89%), Query Frame = 1 Query: 34 RAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGA-IAADISVPRDG 657 R ++ER L DL ++RV H + S K V +YY SL +RA+ LGC LCKT++MEN AC+ DP +SR+Y VV+QY +KL S++L + P ++ ++ +FN Q APE+VS L+GF HNGVS FG +PVI+S A+ L+ FIW+GGG L+KL +S DLV L A +A I+ R G Sbjct: 17 RLDSLERSLD----DLKR-IKRVNLHLQHGKLSSAALKTVPSDYYSWSLAQRASVLGCKIPHLCKTIIMENIACINS-----GNEDPLNSRYYCVVLQYNSKLDSEQLRRFVRDSIPEADRPAKKKFNFQHAPEKVSEELTGFQHNGVSTFGTKTRVPVIVSGAIADLKPSFIWLGGGAELIKLRISVQDLVQALKARVAVGITALRTG 215
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A7S2UVD2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVD2_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.340e-40 Identity = 76/187 (40.64%), Postives = 121/187 (64.71%), Query Frame = 1 Query: 91 VERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISVPR 651 V RV++ + +S++ KWV YY +L+ R+ L LCK++VMEN AC H + +DPT+SR+Y+V++QYA++L++++L A+ L+P ++++ R +FN Q+APE+VS L+GFP V+ FG +PVI+SD + L+ +IW+GGGH LKLGVS D ++ L AD++ R Sbjct: 74 VMRVQQATRNL--YSLKTKWVPDYYYQMNLQWRSEHLQSPILHLCKSVVMENTACTHH-----EYTDPTNSRYYLVLIQYASRLNAERLLKAVRGLRPEKDRLPRRKFNFQLAPEQVSHELTGFPKGAVTPFGLTNKIPVILSDKLANLQPAYIWMGGGHVHLKLGVSIKDFISELKPAIADVAEMR 253
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: D0NP05_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NP05_PHYIT) HSP 1 Score: 145 bits (367), Expect = 5.670e-40 Identity = 83/203 (40.89%), Postives = 116/203 (57.14%), Query Frame = 1 Query: 28 EHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAAD 636 + R A+E+ L D + VERVKEH R S K +YY +L +RA LGC LCK++++EN AC+ DP +SR+Y V +QY +KL +++L + P ++ S+ +FN Q AP EVS L+GF HNGVS FG P+PVI++ A+ LR +W+GGG +KL +S DLV LGA AD Sbjct: 15 QERLDALEKSL-----DDLEGVERVKEHLKRENLTSAALKTAPSDYYAWTLTKRAKLLGCEIPHLCKSIIVENVACVNS-----GVEDPLNSRYYCVALQYNSKLDAEQLRRFVRDNIPEADRPSKKKFNFQHAPGEVSEELTGFGHNGVSAFGMKTPIPVIVAGAIAELRPPCLWLGGGAESVKLRISVQDLVKALGARVAD 207
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A5D6XQ97_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ97_9STRA) HSP 1 Score: 145 bits (366), Expect = 9.750e-40 Identity = 81/207 (39.13%), Postives = 115/207 (55.56%), Query Frame = 1 Query: 25 LEHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISV 645 ++ R ER+L DL VERV+ H + S K +YY SL +RA+ LGC QLCK++++EN ACM DP +SRFY V++QY +KL+++ L ++ P E+ R FN Q AP +S L+GF HNGV+ FG +PV++S V L FIW+GGG +KL + L+ GL A+ AD S+ Sbjct: 19 VQSRLATAERQLA----DLRG-VERVRRHVQHAQLTSAFLKTAPGDYYSWSLAQRASFLGCQVPQLCKSIIVENTACMN-----AGVEDPRNSRFYCVILQYNSKLNAEALMRSVRNQIPEAERPGRKHFNFQHAPGNMSEELTGFQHNGVAPFGMKTAIPVVVSGEVAALEPAFIWLGGGAETVKLRIGVQQLIKGLAALVADKSL 215
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: B8BSG7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSG7_THAPS) HSP 1 Score: 144 bits (363), Expect = 3.240e-39 Identity = 76/210 (36.19%), Postives = 128/210 (60.95%), Query Frame = 1 Query: 34 RAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGC-LKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPT-EEKVSRGRFN-LQVAPEEVSLTLSGFPHNGVSVFGGL-APMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISVPR 651 R +E+ G A D++ + R + H +S ++ W +YY +L+ER LG K QLCK + ENK + + D +D T+S++Y++VVQY ++ + L++ + L+P ++ F+ L++APEEVS L+G+ HNGVS FG L A +P+++ +++ +R +FIW+GGGH LKLG++ ++ V+G+ AI D+S PR Sbjct: 13 RLNELEKSAWGCAGDITPEMRRARRHVQSAGCYSSQWCWCPSHYYSLALDERKEILGAHSKSQLCKACLFENKNFVPNDVATGDCADRTNSKYYLIVVQYVESINIKTLASELRGLRPPGATRLDPNYFSDLRLAPEEVSEQLTGYGHNGVSPFGMLEASIPIVVCKSILSVRPKFIWMGGGHKDLKLGLAVSEFVSGVDAIVLDVSEPR 222
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A3R7Z0T5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7Z0T5_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.420e-38 Identity = 81/204 (39.71%), Postives = 119/204 (58.33%), Query Frame = 1 Query: 25 LEHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAAD 636 ++ R ++ER L D + V+RVK+H R + K +YY SL++RA LGC LCK+++MEN A ++ + D +SR+Y VVVQY +KL +++L + P ++ S+ FN Q A E+S TL+GF HNGVS FG P+PVII+ + L+S F+W+GGG +KL +S D+V LGA AD Sbjct: 14 IQERLTSLERCL-----DDLERVKRVKKHLEREKLTIAVLKTTPSDYYSWSLDQRAKLLGCEIPHLCKSIIMENVAYLDS-----NVEDSLNSRYYCVVVQYNSKLDAEQLRRFVRNNIPEPDRPSKKNFNFQHASSEMSETLTGFGHNGVSTFGMKTPIPVIIAGNIAALKSSFLWLGGGAEHVKLRISVQDMVRVLGARVAD 207
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A7S1UQY1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UQY1_9STRA) HSP 1 Score: 138 bits (347), Expect = 9.960e-37 Identity = 85/227 (37.44%), Postives = 131/227 (57.71%), Query Frame = 1 Query: 19 QLLEHRAGAIERRLQG--DAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKE-QLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPT-EEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLA--PMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISVPRDGQSAIVEDD 681 Q +E+R +ER+ D+ D + R +E + +S ++KWV +YY L +RA LG LCK+++MENK P D DPT+ +F +VV+QYAA L ++KL+ AI L+P ++++ +F+ +VA E + L+G+ N V+ FG + +PVI+++ V+ L F+W+GGGH LKLG++ D AI ADIS PR G S V+DD Sbjct: 10 QAIENRLDVLERKRYQCPKGTDVDDSMRRAREDTEKRGIYSAKWKWVPESYYSWPLSKRAKCLGASSVGMLCKSLLMENK------PAPSDGKDPTNPKFVLVVIQYAATLDTRKLANAIRSLRPVVKDRLDYSQFDFRVASPEDNDRLTGYKFNSVTPFGMASGQTIPVILTEDVVPL--SFLWMGGGHVHLKLGMAVCDFSKATKAIVADISQPRSGASDEVDDD 228 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1211.1338.1 >prot_H-paniculata_contig1211.1338.1 ID=prot_H-paniculata_contig1211.1338.1|Name=mRNA_H-paniculata_contig1211.1338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp VSSGFRQLLEHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWback to top mRNA from alignment at H-paniculata_contig1211:10142..13862+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1211.1338.1 ID=mRNA_H-paniculata_contig1211.1338.1|Name=mRNA_H-paniculata_contig1211.1338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3721bp|location=Sequence derived from alignment at H-paniculata_contig1211:10142..13862+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1211:10142..13862+ >mRNA_H-paniculata_contig1211.1338.1 ID=mRNA_H-paniculata_contig1211.1338.1|Name=mRNA_H-paniculata_contig1211.1338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1392bp|location=Sequence derived from alignment at H-paniculata_contig1211:10142..13862+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |