mRNA_H-paniculata_contig1211.1338.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1211.1338.1
Unique NamemRNA_H-paniculata_contig1211.1338.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A6H5LM28_9PHAE (tRNA_edit domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LM28_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 6.330e-98
Identity = 150/229 (65.50%), Postives = 177/229 (77.29%), Query Frame = 1
Query:    1 VSSGFRQLLEHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISVPRDGQSAIVEDDGS 687
            VS+   QL+  RA AIERRL+G+ PDL+DP+ERVKEHCHR  A S+R+KWV   YYDT LEERA ELG   EQLCKTM+MENKA         D +DPT  RFY+VVVQYAA+LSSQK+S A+MR+    ++ SRGR NLQVAPEEV L+LSGFPHNGV+VFGGL P+PVI+S+AV+ LR  F+W+G GHPLLKLGVST DLV  LGA  ADISVPRDG  A  ED+G+
Sbjct:   10 VSNQTLQLIARRAVAIERRLRGEPPDLTDPIERVKEHCHRAGATSVRYKWVPHGYYDTPLEERAKELGSEPEQLCKTMIMENKA--------FDENDPTMERFYLVVVQYAARLSSQKISAAVMRMM---KRSSRGRCNLQVAPEEVGLSLSGFPHNGVTVFGGLTPIPVILSEAVLALRPSFVWLGAGHPLLKLGVSTEDLVKKLGATVADISVPRDGPGA-AEDEGA 226          
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A836CLD2_9STRA (YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD2_9STRA)

HSP 1 Score: 161 bits (408), Expect = 5.090e-46
Identity = 93/215 (43.26%), Postives = 125/215 (58.14%), Query Frame = 1
Query:   19 QLLEHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSS---QKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISVPRD 654
            Q LE R   I R  QGD   L+DPVERVK    +    S RFKWV P YYD SLEERA  L C   QL K+++ +  A  E        S   +  + MV+VQY AK++    Q++  A++  +  ++     R +  +AP+E  L L+GFPHNGVS FG L  +P+++S A+  L  +F+W+GGGH  LK+GVS  DLV  L A  AD+S PRD
Sbjct:   19 QDLEARVATILRAQQGDKAALTDPVERVKAEAQKC--LSARFKWVEPTYYDKSLEERATILRCHPRQLTKSLLFKGNAGSEAAD-----SSGAAPVYMMVIVQYLAKINLKLLQEVGNALLAGRQGQK-----RLSFALAPDEEGLALTGFPHNGVSPFGSLCRVPMVLSSAIAELPEQFLWMGGGHTDLKIGVSVQDLVRALNAHVADVSEPRD 221          
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A225UIC1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225UIC1_9STRA)

HSP 1 Score: 148 bits (373), Expect = 7.340e-41
Identity = 85/210 (40.48%), Postives = 122/210 (58.10%), Query Frame = 1
Query:   28 EHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAAD-ISVPRD 654
            + R  A+ER L     D  + V+RVK H  R +  S   K    +YY  +L +RA  LGC    LCK++++EN AC+          DP +SR+Y VV+QY AKL ++ L   +    P +++ ++ +FN Q AP +VS  L+GF HNGVS FG   P+PVI++ A+  L+  F+W+GGG   +KL +S  DLV  LGA  AD I+  RD
Sbjct:   15 QKRLDALERSL-----DDLEGVKRVKSHLQREKLASAALKSAPSDYYTWTLAQRAKLLGCAVPHLCKSIIVENVACINS-----GVEDPLNSRYYCVVLQYNAKLDAELLRRFVRDNIPEKDRPAKKKFNFQHAPGDVSEELTGFGHNGVSTFGMKTPIPVIVAGAIAELKPSFLWLGGGAESVKLRISVQDLVKALGARVADGITTLRD 214          
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A484EHU1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHU1_BRELC)

HSP 1 Score: 147 bits (372), Expect = 1.160e-40
Identity = 87/209 (41.63%), Postives = 121/209 (57.89%), Query Frame = 1
Query:   34 RAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGA-IAADISVPRDG 657
            R  ++ER L     DL   ++RV  H    +  S   K V  +YY  SL +RA+ LGC    LCKT++MEN AC+          DP +SR+Y VV+QY +KL S++L   +    P  ++ ++ +FN Q APE+VS  L+GF HNGVS FG    +PVI+S A+  L+  FIW+GGG  L+KL +S  DLV  L A +A  I+  R G
Sbjct:   17 RLDSLERSLD----DLKR-IKRVNLHLQHGKLSSAALKTVPSDYYSWSLAQRASVLGCKIPHLCKTIIMENIACINS-----GNEDPLNSRYYCVVLQYNSKLDSEQLRRFVRDSIPEADRPAKKKFNFQHAPEKVSEELTGFQHNGVSTFGTKTRVPVIVSGAIADLKPSFIWLGGGAELIKLRISVQDLVQALKARVAVGITALRTG 215          
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A7S2UVD2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVD2_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.340e-40
Identity = 76/187 (40.64%), Postives = 121/187 (64.71%), Query Frame = 1
Query:   91 VERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISVPR 651
            V RV++    +  +S++ KWV   YY  +L+ R+  L      LCK++VMEN AC  H     + +DPT+SR+Y+V++QYA++L++++L  A+  L+P ++++ R +FN Q+APE+VS  L+GFP   V+ FG    +PVI+SD +  L+  +IW+GGGH  LKLGVS  D ++ L    AD++  R
Sbjct:   74 VMRVQQATRNL--YSLKTKWVPDYYYQMNLQWRSEHLQSPILHLCKSVVMENTACTHH-----EYTDPTNSRYYLVLIQYASRLNAERLLKAVRGLRPEKDRLPRRKFNFQLAPEQVSHELTGFPKGAVTPFGLTNKIPVILSDKLANLQPAYIWMGGGHVHLKLGVSIKDFISELKPAIADVAEMR 253          
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: D0NP05_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NP05_PHYIT)

HSP 1 Score: 145 bits (367), Expect = 5.670e-40
Identity = 83/203 (40.89%), Postives = 116/203 (57.14%), Query Frame = 1
Query:   28 EHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAAD 636
            + R  A+E+ L     D  + VERVKEH  R    S   K    +YY  +L +RA  LGC    LCK++++EN AC+          DP +SR+Y V +QY +KL +++L   +    P  ++ S+ +FN Q AP EVS  L+GF HNGVS FG   P+PVI++ A+  LR   +W+GGG   +KL +S  DLV  LGA  AD
Sbjct:   15 QERLDALEKSL-----DDLEGVERVKEHLKRENLTSAALKTAPSDYYAWTLTKRAKLLGCEIPHLCKSIIVENVACVNS-----GVEDPLNSRYYCVALQYNSKLDAEQLRRFVRDNIPEADRPSKKKFNFQHAPGEVSEELTGFGHNGVSAFGMKTPIPVIVAGAIAELRPPCLWLGGGAESVKLRISVQDLVKALGARVAD 207          
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A5D6XQ97_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ97_9STRA)

HSP 1 Score: 145 bits (366), Expect = 9.750e-40
Identity = 81/207 (39.13%), Postives = 115/207 (55.56%), Query Frame = 1
Query:   25 LEHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISV 645
            ++ R    ER+L     DL   VERV+ H    +  S   K    +YY  SL +RA+ LGC   QLCK++++EN ACM          DP +SRFY V++QY +KL+++ L  ++    P  E+  R  FN Q AP  +S  L+GF HNGV+ FG    +PV++S  V  L   FIW+GGG   +KL +    L+ GL A+ AD S+
Sbjct:   19 VQSRLATAERQLA----DLRG-VERVRRHVQHAQLTSAFLKTAPGDYYSWSLAQRASFLGCQVPQLCKSIIVENTACMN-----AGVEDPRNSRFYCVILQYNSKLNAEALMRSVRNQIPEAERPGRKHFNFQHAPGNMSEELTGFQHNGVAPFGMKTAIPVVVSGEVAALEPAFIWLGGGAETVKLRIGVQQLIKGLAALVADKSL 215          
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: B8BSG7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSG7_THAPS)

HSP 1 Score: 144 bits (363), Expect = 3.240e-39
Identity = 76/210 (36.19%), Postives = 128/210 (60.95%), Query Frame = 1
Query:   34 RAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGC-LKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPT-EEKVSRGRFN-LQVAPEEVSLTLSGFPHNGVSVFGGL-APMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISVPR 651
            R   +E+   G A D++  + R + H      +S ++ W   +YY  +L+ER   LG   K QLCK  + ENK  + +     D +D T+S++Y++VVQY   ++ + L++ +  L+P    ++    F+ L++APEEVS  L+G+ HNGVS FG L A +P+++  +++ +R +FIW+GGGH  LKLG++ ++ V+G+ AI  D+S PR
Sbjct:   13 RLNELEKSAWGCAGDITPEMRRARRHVQSAGCYSSQWCWCPSHYYSLALDERKEILGAHSKSQLCKACLFENKNFVPNDVATGDCADRTNSKYYLIVVQYVESINIKTLASELRGLRPPGATRLDPNYFSDLRLAPEEVSEQLTGYGHNGVSPFGMLEASIPIVVCKSILSVRPKFIWMGGGHKDLKLGLAVSEFVSGVDAIVLDVSEPR 222          
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A3R7Z0T5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7Z0T5_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.420e-38
Identity = 81/204 (39.71%), Postives = 119/204 (58.33%), Query Frame = 1
Query:   25 LEHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAAD 636
            ++ R  ++ER L     D  + V+RVK+H  R +      K    +YY  SL++RA  LGC    LCK+++MEN A ++      +  D  +SR+Y VVVQY +KL +++L   +    P  ++ S+  FN Q A  E+S TL+GF HNGVS FG   P+PVII+  +  L+S F+W+GGG   +KL +S  D+V  LGA  AD
Sbjct:   14 IQERLTSLERCL-----DDLERVKRVKKHLEREKLTIAVLKTTPSDYYSWSLDQRAKLLGCEIPHLCKSIIMENVAYLDS-----NVEDSLNSRYYCVVVQYNSKLDAEQLRRFVRNNIPEPDRPSKKNFNFQHASSEMSETLTGFGHNGVSTFGMKTPIPVIIAGNIAALKSSFLWLGGGAEHVKLRISVQDMVRVLGARVAD 207          
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Match: A0A7S1UQY1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UQY1_9STRA)

HSP 1 Score: 138 bits (347), Expect = 9.960e-37
Identity = 85/227 (37.44%), Postives = 131/227 (57.71%), Query Frame = 1
Query:   19 QLLEHRAGAIERRLQG--DAPDLSDPVERVKEHCHRVEAHSIRFKWVLPNYYDTSLEERAAELGCLKE-QLCKTMVMENKACMEHTPGCVDPSDPTSSRFYMVVVQYAAKLSSQKLSTAIMRLKPT-EEKVSRGRFNLQVAPEEVSLTLSGFPHNGVSVFGGLA--PMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTNDLVNGLGAIAADISVPRDGQSAIVEDD 681
            Q +E+R   +ER+        D+ D + R +E   +   +S ++KWV  +YY   L +RA  LG      LCK+++MENK      P   D  DPT+ +F +VV+QYAA L ++KL+ AI  L+P  ++++   +F+ +VA  E +  L+G+  N V+ FG  +   +PVI+++ V+ L   F+W+GGGH  LKLG++  D      AI ADIS PR G S  V+DD
Sbjct:   10 QAIENRLDVLERKRYQCPKGTDVDDSMRRAREDTEKRGIYSAKWKWVPESYYSWPLSKRAKCLGASSVGMLCKSLLMENK------PAPSDGKDPTNPKFVLVVIQYAATLDTRKLANAIRSLRPVVKDRLDYSQFDFRVASPEDNDRLTGYKFNSVTPFGMASGQTIPVILTEDVVPL--SFLWMGGGHVHLKLGMAVCDFSKATKAIVADISQPRSGASDEVDDD 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1211.1338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LM28_9PHAE6.330e-9865.50tRNA_edit domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CLD2_9STRA5.090e-4643.26YbaK/aminoacyl-tRNA synthetase-associated domain-c... [more]
A0A225UIC1_9STRA7.340e-4140.48Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A484EHU1_BRELC1.160e-4041.63Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S2UVD2_9STRA1.340e-4040.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D0NP05_PHYIT5.670e-4040.89Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A5D6XQ97_9STRA9.750e-4039.13Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
B8BSG7_THAPS3.240e-3936.19Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A3R7Z0T5_9STRA1.420e-3839.71Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A7S1UQY1_9STRA9.960e-3737.44Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1211contigH-paniculata_contig1211:10142..13862 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score150.2
Seed ortholog evalue1.2e-33
Seed eggNOG ortholog115417.EPrPW00000018548
Hectar predicted targeting categoryother localisation
EggNOG free text desc.YbaK prolyl-tRNA synthetase. Source PGD
EggNOG OGs1MCCY@121069,28KZ5@1,2QTG1@2759
Ec32 ortholog descriptionYbaK/aminoacyl-tRNA synthetase-associated domain
Ec32 orthologEc-11_005910.1
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons5
Model size696
Cds size696
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1211.1338.1prot_H-paniculata_contig1211.1338.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1211 10142..13862 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928929.8047373-CDS-H-paniculata_contig1211:10141..102881622928929.8047373-CDS-H-paniculata_contig1211:10141..10288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1211 10142..10288 +
1691480671.4216652-CDS-H-paniculata_contig1211:10141..102881691480671.4216652-CDS-H-paniculata_contig1211:10141..10288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1211 10142..10288 +
1622928929.8170826-CDS-H-paniculata_contig1211:11444..115581622928929.8170826-CDS-H-paniculata_contig1211:11444..11558Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1211 11445..11558 +
1691480671.4324474-CDS-H-paniculata_contig1211:11444..115581691480671.4324474-CDS-H-paniculata_contig1211:11444..11558Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1211 11445..11558 +
1622928929.8301303-CDS-H-paniculata_contig1211:12688..128181622928929.8301303-CDS-H-paniculata_contig1211:12688..12818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1211 12689..12818 +
1691480671.44232-CDS-H-paniculata_contig1211:12688..128181691480671.44232-CDS-H-paniculata_contig1211:12688..12818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1211 12689..12818 +
1622928929.84172-CDS-H-paniculata_contig1211:12857..129041622928929.84172-CDS-H-paniculata_contig1211:12857..12904Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1211 12858..12904 +
1691480671.4518309-CDS-H-paniculata_contig1211:12857..129041691480671.4518309-CDS-H-paniculata_contig1211:12857..12904Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1211 12858..12904 +
1622928929.8581567-CDS-H-paniculata_contig1211:13604..138621622928929.8581567-CDS-H-paniculata_contig1211:13604..13862Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1211 13605..13862 +
1691480671.4615428-CDS-H-paniculata_contig1211:13604..138621691480671.4615428-CDS-H-paniculata_contig1211:13604..13862Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1211 13605..13862 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1211.1338.1

>prot_H-paniculata_contig1211.1338.1 ID=prot_H-paniculata_contig1211.1338.1|Name=mRNA_H-paniculata_contig1211.1338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
VSSGFRQLLEHRAGAIERRLQGDAPDLSDPVERVKEHCHRVEAHSIRFKW
VLPNYYDTSLEERAAELGCLKEQLCKTMVMENKACMEHTPGCVDPSDPTS
SRFYMVVVQYAAKLSSQKLSTAIMRLKPTEEKVSRGRFNLQVAPEEVSLT
LSGFPHNGVSVFGGLAPMPVIISDAVMGLRSEFIWIGGGHPLLKLGVSTN
DLVNGLGAIAADISVPRDGQSAIVEDDGSAL*
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mRNA from alignment at H-paniculata_contig1211:10142..13862+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1211.1338.1 ID=mRNA_H-paniculata_contig1211.1338.1|Name=mRNA_H-paniculata_contig1211.1338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3721bp|location=Sequence derived from alignment at H-paniculata_contig1211:10142..13862+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGTCGTCTGGTTTTCGTCAGCTCCTTGAACACAGAGCCGGGGCCATCGA GCGGCGCTTGCAAGGAGACGCACCTGATCTTAGTGACCCCGTCGAGCGCG TGAAAGAGCATTGTCATCGGGTAGAGGCACATAGTATCAGATTCAAGGTG GGGTGATATGGTGCGGTACGATGCGGCAACGGTACGCTGCCAGTGTCGGA GGGATGTGTAGTTATTTTCTCGATGGTTTCGTTGCAAGGCCCACGATGCG AAATTCGCTCGGTATTATGGAGGATGACACCAACAATTCAATTTCCGTAG TTTGCCGGGATACCAGAACTCACCTAGTTCAAACTCAATTATCTCAAAAC GTTGCGGTTCTACAATAGCGACATCGGAAGGTGCATCGCTAGTATTATTT TTCATGGTGCCATCGTCTCCTCAAAACCTTCCGTAAAGCTGGATTTGGGT TGTGCAGCTGGGTTTCGCGATCGGTGCATCTTGGTGTGGGTTTGCTGTAG AGTGATGGGAGCTTGATGACTTTTTTGCCATATCTCCGGGCTTTCTAGGG GTTGGATACACTAAATTCGCCGCATGCACTCCGATTGTAACCTGATTATA CACCGCTAAATTGCCGGAATAAGACGATTATGTTGTTTGTTCTACGAGTA CGGGGTGTATTAGATCCATTGTATAAATAAAATTCTGGAAGCTATGATGC TCCCTCCCCCCTGTACTTTGACCTTTGCCAGTTTGTAGATAAGTAATACA GCATCTTGGAAGTGCCGAGCATATCTCTGTTTTTTTTTACGGTTATGGTG ATGCCTCCCCCCCTCATCCTCCCTGGGGGTAGTGGTTTACCAGCTCGCAG GATATATGCACCACATGAACCACCGTCCTCTTTGACTCAACTCTCACATT CCCTGGGTATCCGTCTGTGGGTGCATCGGGGCCTACCTGCAATAAATGCT CACGCTGATGATGTATGTACATTAAGTCTGCTGATCATGTGAAATGAGTA TTGGCCGGGATAGAACTGCTATACGAAAGCCTTATCCTCGTGGCATGAGT AACAGCAAGCTTTTTTGCCTTGATCTCTTGAGTGACTGAAAAAAAGTCCC CATCCTCTTGAAGAGGAGGAGGAGGGAGAGAGGTGGTACACGCTAGGGAG AGGGTGTGGTGCAAACTAGGGGGAGGGTAGAAGCGTTAGGCGAGTAGCAG TGTAAATGACGTGCGATGTTCCGGTGTACCAAGACACAGCTAAGTGTGAG CACTTGAAGGTTCTTCATGCGTCCCAGCCTCTCATCCTTGCCTTGTCGCC CAGTGGGTGTTGCCCAACTACTACGACACATCTTTGGAGGAGCGAGCGGC AGAGTTGGGTTGCTTGAAGGAGCAGCTATGCAAGACCATGGTCATGGAGA ACAAGGCCTGTATGGAGGTCCGTCGTTTTTAATCGAGGAGTCATCTTTGT CGCCAGATAAATGTTTTTGGGATATTCTCACGATTTGTCGGGGTGCGTTT AGACTGGGTTCGGGGAGTCTGGGCAAGCAGATAGGGGTGCGTTATCGTAA GGCTGGGTCTCACGGGTATAGGGTTGAGTGTGGTGCACAAATCATGGCGG TTACATCTACTGGGATTTCGACTCGGTGCTGGCCTTGGGATAGAGATGAG CTCTTCAACACGAAGAAGCAAGAGCTAGTGCCGAGGTTTGACCTACAGCA GCATGCGGTTCAGTATGGTGGCCTCGAGGGTCGTCGCCGTCTTGCCTACA TCCGCCCTACGTGACACGCAGTAGACGTGTCAACTCTTTATTGCAAGTGC TGAATTGCTGTAGACTGTAACAATGGCTGTGATGTACCCTAACGAAGTGC ATTCGTAGGGAGCAAAGGTATCTGAATACATGCACCACAGTATGACAGCG GGCTCATTCTATGAAGGGTCGGGTGCTAAGTGAATCCACTATACTCATAC CTTAGCTGCGATCTCTAATACAACTATGTTTTGGGGTGCAAATCGAAAGG TATTTGCGGCGATACTCGAGTGGTTTGGATCACACCGAATCGGACAGATC GTGAGGGCCTCAAAGCAATGCCTGGATTTTTTTATCCGTAGGTAGGGGCC AATGCAGCTAATGTGTATCACTTGAACAACATATTAGGTCGAAACGTTGG GCACTCCATCCCCGCCTTGTTGATCTAATTTTTCTGATAAATGTACACAA CTGAAGGTTGAAGTAGAGCTGCTGCTTAACCTCGACGTGGGTACAACGGA GTTATCATATGAGCGTTAGAACTTGTCACTACTAACTGTGGCAAATGGGT TGACTTACGAAGGAGAATCCCGGTGGGTGAAAGGTGGGGGGTCATTTTTG CTGTAGTTTCATGTTTACGTATACTATACACGAGACTGGTACTACCCTCG TCACACTCTCCTCCCGAGGACGCGCGGTCGATGGGCTAACAACAACAACA TGCAAAGTACGAGTATGCCCCAAGCAGCGTGAACCGTTTCACCGAAAAGC TACTGGCGTCATCGTCCGTCCTCCCCGCGCCTCGGTCGTATCCTCAGCAC ACTCCGGGGTGCGTGGATCCCTCTGATCCGACGAGCAGCCGGTTCTATAT GGTAGTGGTGCAATATGCCGCCAAGCTCAGCTCTCAGAAGCTTTCGACTG CTATCATGAGGCTCAAGCCTACCGAAGGTAGCGGCGGCGGCGAGGGAGGG GGGGAAGGGGGAAGAGAAAAGGTTTCACGCGGCCGGTTCAACCTGCAAGT GGCCCCTGAGGAGGTGAGAATGTGGAGGATATTTCCTGTGGAAAGTTTTT CGTTGAAGATTTTGTTATAGGATTATGCCTTGTTGCTTTAGAGGATAATG GCCCCTTTGTAGTTACGGACCCTTGTTATACCACACGTTTTTTTCTTCTT CATTTTTTTGTGTGGGAGACTCTGGGGGAGCTGCTCGCACGAAATCTTGG TAGTTGATTCTCGAGGAGGTTTCCCATACTCGACTGTCCTTTTTGTGTCG GCGGTGCTGTTCGCCGTTTAGTCCCGTACGAACATTACCGAGTCCCCGAA CTGACTCTTTTTTTTCAAGTAGACAAGTAAAGTATCATCAACAAGATGTC TTGACCAACGAAAAGTCCTCTGTGATTTGAACGGTTTATTTAGGCAATCG TATTTTCGGATCATTTTCCCTGTGTTCTATTGTGTGTGTCCATTGCTTTC TTGATGGTGTATTTTCTCGGAACAAGTTCAACGTATATTCATCCTACCGT CTTTCATGGCGTAGCCGTGGCCAGCTTGTTAAGTAAAGTACACAACGCTT TCTGTTGCGCGGCCCGTGAAGTGGTTGTGCACACCTGCATGTACCTCCAC GCACCTCCACCTTTATCCCGGCACATCATGCCTCCTCGTTTTGGATCATG ATTTATAAAGCGCGAAGCGCGACACCCTTCCTTGCTACATTGCACCAACA ATACCTTACACAGGTGAGCTTGACGCTGTCCGGGTTTCCGCACAACGGCG TTTCCGTTTTCGGCGGCTTAGCACCAATGCCTGTAATCATCTCGGACGCT GTGATGGGCCTCAGATCGGAGTTTATTTGGATCGGAGGGGGACACCCTCT GCTGAAGCTCGGCGTCAGCACGAACGACCTGGTGAACGGCCTAGGGGCCA TTGCTGCGGATATTTCTGTCCCGCGAGATGGCCAATCAGCCATAGTGGAG GATGACGGTAGCGCTTTATAG
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Coding sequence (CDS) from alignment at H-paniculata_contig1211:10142..13862+

>mRNA_H-paniculata_contig1211.1338.1 ID=mRNA_H-paniculata_contig1211.1338.1|Name=mRNA_H-paniculata_contig1211.1338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1392bp|location=Sequence derived from alignment at H-paniculata_contig1211:10142..13862+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGTCGTCTGGTTTTCGTCAGCTCCTTGAACACAGAGCCGGGGCCATCGA
GCGGCGCTTGCAAGGAGACGCACCTGATCTTAGTGACCCCGTCGAGCGCG
TGAAAGAGCATTGTCATCGGGTAGAGGCACATAGTATCAGATTCAAGGTG
TCGTCTGGTTTTCGTCAGCTCCTTGAACACAGAGCCGGGGCCATCGAGCG
GCGCTTGCAAGGAGACGCACCTGATCTTAGTGACCCCGTCGAGCGCGTGA
AAGAGCATTGTCATCGGGTAGAGGCACATAGTATCAGATTCAAGTGGGTG
TTGCCCAACTACTACGACACATCTTTGGAGGAGCGAGCGGCAGAGTTGGG
TTGCTTGAAGGAGCAGCTATGCAAGACCATGGTCATGGAGAACAAGGCCT
GTATGGAGTGGGTGTTGCCCAACTACTACGACACATCTTTGGAGGAGCGA
GCGGCAGAGTTGGGTTGCTTGAAGGAGCAGCTATGCAAGACCATGGTCAT
GGAGAACAAGGCCTGTATGGAGCACACTCCGGGGTGCGTGGATCCCTCTG
ATCCGACGAGCAGCCGGTTCTATATGGTAGTGGTGCAATATGCCGCCAAG
CTCAGCTCTCAGAAGCTTTCGACTGCTATCATGAGGCTCAAGCCTACCGA
AGCACACTCCGGGGTGCGTGGATCCCTCTGATCCGACGAGCAGCCGGTTC
TATATGGTAGTGGTGCAATATGCCGCCAAGCTCAGCTCTCAGAAGCTTTC
GACTGCTATCATGAGGCTCAAGCCTACCGAAGAAAAGGTTTCACGCGGCC
GGTTCAACCTGCAAGTGGCCCCTGAGGAGAAAAGGTTTCACGCGGCCGGT
TCAACCTGCAAGTGGCCCCTGAGGAGGTGAGCTTGACGCTGTCCGGGTTT
CCGCACAACGGCGTTTCCGTTTTCGGCGGCTTAGCACCAATGCCTGTAAT
CATCTCGGACGCTGTGATGGGCCTCAGATCGGAGTTTATTTGGATCGGAG
GGGGACACCCTCTGCTGAAGCTCGGCGTCAGCACGAACGACCTGGTGAAC
GGCCTAGGGGCCATTGCTGCGGATATTTCTGTCCCGCGAGATGGCCAATC
AGCCATAGTGGAGGATGACGGTAGCGCTTTATAGGTGAGCTTGACGCTGT
CCGGGTTTCCGCACAACGGCGTTTCCGTTTTCGGCGGCTTAGCACCAATG
CCTGTAATCATCTCGGACGCTGTGATGGGCCTCAGATCGGAGTTTATTTG
GATCGGAGGGGGACACCCTCTGCTGAAGCTCGGCGTCAGCACGAACGACC
TGGTGAACGGCCTAGGGGCCATTGCTGCGGATATTTCTGTCCCGCGAGAT
GGCCAATCAGCCATAGTGGAGGATGACGGTAGCGCTTTATAG
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