mRNA_H-paniculata_contig12100.1334.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12100.1334.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 165 bits (417), Expect = 3.750e-46 Identity = 80/183 (43.72%), Postives = 111/183 (60.66%), Query Frame = 1 Query: 1 REGEPYRSMAYKLRDKDGVEQVEKGLYIIVDGGYHRWRSLVYPTKEAATREQIAWSKRLESVRKDAECFFGILKGRFRILKLPILFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPDMD*AEPDGLLDDWLHDDCTINFGTNGRNSNGPPERVEVEDGFFSMRRKLVTHYTYRVENNEVAWL 549 RE Y + + + DG KG Y++VD GYH+W +L+ P+K + +A+SKRLESVRKD ECFFGI+KG FRILKL I + + +DNV +TCCILHNMLHS+D E + + A GL + W H+ + S+ E VEVE GF + R++L+ + YR N++AWL Sbjct: 58 REDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 240
BLAST of mRNA_H-paniculata_contig12100.1334.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.010e-44 Identity = 81/183 (44.26%), Postives = 112/183 (61.20%), Query Frame = 1 Query: 1 REGEPYRSMAYKLRDKDGVEQVEKGLYIIVDGGYHRWRSLVYPTKEAATREQIAWSKRLESVRKDAECFFGILKGRFRILKLPILFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPDMD*AEPDGLLDDWLHDDCTINFGTNGRNSNGPPERVEVEDGFFSMRRKLVTHYTYRVENNEVAWL 549 RE Y + + + DG KG Y++VD GYH+W +L+ P+K + +A+SKRLESVRKD ECFFGI+KGRFRILKL I + + +DNV +TCCILHNMLHS+D E + + A GL + W H+ + S+ E VEVE GF + R++L+ + YR N++AWL Sbjct: 299 REDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481
BLAST of mRNA_H-paniculata_contig12100.1334.1 vs. uniprot
Match: A0A6H5JP18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP18_9PHAE) HSP 1 Score: 157 bits (398), Expect = 4.670e-44 Identity = 78/181 (43.09%), Postives = 118/181 (65.19%), Query Frame = 1 Query: 16 YRSMAYKLRDKDGVEQVEKGLYIIVDGGYHRWRSLVYPTKEAATREQIAWSKRLESVRKDAECFFGILKGRFRILKLPILFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPDMD*AEPDGLLDDWL-HDDCTINFGTNGRNSNGPPERVEVEDGFFSMRRKLVTHYTYRVENNEVAWLRS 555 Y+ + Y L+ +DG + EK ++IVDGGYH W+ L P + +++ + +S++LESVRKD+EC FG++KGRFRI K+ L+R+ ++DN+ +TC ILHNML ++DG++L EPD D A DG LD + H ++ T+ VE +DGF ++R+KLVT++ YR V W RS Sbjct: 8 YKDVKYTLKGEDGADIKEKRPWLIVDGGYHNWKQLQSPIRAPSSKAESGFSRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTH------EDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 182
BLAST of mRNA_H-paniculata_contig12100.1334.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 160 bits (405), Expect = 1.360e-42 Identity = 88/183 (48.09%), Postives = 116/183 (63.39%), Query Frame = 1 Query: 16 YRSMAYKLRDKDGVEQVEKGLYIIVDGGYHRWRSLVYPTKEAATREQIAWSKRLESVRKDAECFFGILKGRFRILKLPILFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPDMD*AEPDGLLDDWLHD----DCTINFGTNGRNSNGPPERVEVEDGFFSMRRKLVTHYTYRVENN-EVAWL 549 Y YKL +DG + EKG Y++VD GYH+WR+L+ P+K R + +SKRLES RKD EC+FGILKGRFRI KL I F + +DNV +TCCILHNMLHSFD + DM EP+ LH+ D ++ + G + +G E VEVE GF ++R KLVT++ YR E ++ WL Sbjct: 229 YTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFD----NRGDMS-EEPNWAGSAGLHNAADRDPNTDYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405
BLAST of mRNA_H-paniculata_contig12100.1334.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 160 bits (405), Expect = 7.310e-42 Identity = 88/183 (48.09%), Postives = 116/183 (63.39%), Query Frame = 1 Query: 16 YRSMAYKLRDKDGVEQVEKGLYIIVDGGYHRWRSLVYPTKEAATREQIAWSKRLESVRKDAECFFGILKGRFRILKLPILFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPDMD*AEPDGLLDDWLHD----DCTINFGTNGRNSNGPPERVEVEDGFFSMRRKLVTHYTYRVENN-EVAWL 549 Y YKL +DG + EKG Y++VD GYH+WR+L+ P+K R + +SKRLES RKD EC+FGILKGRFRI KL I F + +DNV +TCCILHNMLHSFD + DM EP+ LH+ D ++ + G + +G E VEVE GF ++R KLVT++ YR E ++ WL Sbjct: 320 YTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFD----NRGDMS-EEPNWAGSAGLHNAADRDPNTDYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496
BLAST of mRNA_H-paniculata_contig12100.1334.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 159 bits (401), Expect = 1.300e-41 Identity = 78/181 (43.09%), Postives = 117/181 (64.64%), Query Frame = 1 Query: 16 YRSMAYKLRDKDGVEQVEKGLYIIVDGGYHRWRSLVYPTKEAATREQIAWSKRLESVRKDAECFFGILKGRFRILKLPILFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPDMD*AEPDGLLDDWL-HDDCTINFGTNGRNSNGPPERVEVEDGFFSMRRKLVTHYTYRVENNEVAWLRS 555 Y+ + Y L+ +DG + EKG ++IVDGGYH W+ L P + + + + + ++LESVRKD+EC FG++KGRFRI K+ L+R+ ++DN+ +TC ILHNML ++DG++L EPD D A DG LD + H ++ T+ VE +DGF ++R+KLVT++ YR V W RS Sbjct: 279 YKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTH------EDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 453
BLAST of mRNA_H-paniculata_contig12100.1334.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 150 bits (378), Expect = 3.740e-40 Identity = 75/191 (39.27%), Postives = 109/191 (57.07%), Query Frame = 1 Query: 16 YRSMAYKLRDKDGVEQVEKGLYIIVDGGYHRWRSLVYPTKEAATREQIAWSKRLESVRKDAECFFGILKGRFRILKLPILFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPDMD*AEPDGLLDDWLHDDCT--INFGTNG-----------RNSNGPPERVEVEDGFFSMRRKLVTHYTYRVENNEVAWL 549 Y YKLR +G E+ +G ++I+D YH W +L+ P+K + + A+S+ LESVRKD ECFFGILKGRFRILKL + + + +DN+ +TCCILHNMLH+FDGL + + + D G D W HD T + G+ G G R E ++R+L+ + +R + N++ WL Sbjct: 63 YTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 253
BLAST of mRNA_H-paniculata_contig12100.1334.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 150 bits (379), Expect = 1.690e-38 Identity = 82/179 (45.81%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 19 RSMAYKLRDKDGVEQVEKGLYIIVDGGYHRWRSLVYPTKEAATREQIAWSKRLESVRKDAECFFGILKGRFRILKLPILFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPDMD*AEPDGLLDDWLHDDCTINFGTNGRNSNGPPERVEVEDGFFSMRRKLVTHYTYRVENNEVAWLRS 555 + + + L +DG E E+GLY+IVDGGYH+ P + T++++A+ K+LESVRKD ECFFGILKGRFRILK+P+L+R ++D + TCC LHNMLHS+DGL L E D + A DG LD W+ T + NS P+ ED F ++ KLVT+ + V W RS Sbjct: 277 KDVPFTLLGEDGSEFEERGLYLIVDGGYHKC-----PVQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWV---TTPEAESAADNS---PDLHLFEDDFKDLQGKLVTNLAEMKKRGTVGWRRS 444
BLAST of mRNA_H-paniculata_contig12100.1334.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.080e-36 Identity = 76/184 (41.30%), Postives = 113/184 (61.41%), Query Frame = 1 Query: 16 YRSMAYKLRDKDGVEQVEKGLYIIVDGGYHRWRSLVYPTKEAATREQIAWSKRLESVRKDAECFFGILKGRFRILKLPILFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPDMD*AEPDGLLDDWLHDDCTINFGTNGRNSNGPPERVEVEDGFFSMRRKLVTHYTYRVENN-EVAWL-RSQP 561 Y + + KDG + KG Y+IVD GYH+WR L+ P+K + + +SKRLESVRKD ECFFGILK RFRILKL + +++ ++D V +TCCILHNMLH+ DG+ E D++ L + H+ + + GT N ++ +VE ++RKL T++ YR ++ ++ WL R +P Sbjct: 275 YAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLN-----DKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLSRKRP 453
BLAST of mRNA_H-paniculata_contig12100.1334.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 141 bits (355), Expect = 5.260e-36 Identity = 74/182 (40.66%), Postives = 109/182 (59.89%), Query Frame = 1 Query: 16 YRSMAYKLRDKDGVEQVEKGLYIIVDGGYHRWRSLVYPTKEAATREQIAWSKRLESVRKDAECFFGILKGRFRILKLPILFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPDMD*AEPDGL---LDDWLHDDCTINFGTNGRNSNGPPERVEVEDGFFSMRRKLVTHYTYRVENN-EVAWL 549 Y + L ++DG KG Y + D GYH+W+ L+ P+K + + + +SKRLESVRKD ECFFGILKGRFRILKL + ++ ++DNV +TCCILHNMLH+FDG+ + + G+ L DC +FGT N ++ ++E G +R+L T + YR ++ ++ WL Sbjct: 151 YTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCG-SFGTKDVN-----DQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWL 326 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12100.1334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12100.1334.1 >prot_H-paniculata_contig12100.1334.1 ID=prot_H-paniculata_contig12100.1334.1|Name=mRNA_H-paniculata_contig12100.1334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp MAYKLRDKDGVEQVEKGLYIIVDGGYHRWRSLVYPTKEAATREQIAWSKRback to top mRNA from alignment at H-paniculata_contig12100:273..1796+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12100.1334.1 ID=mRNA_H-paniculata_contig12100.1334.1|Name=mRNA_H-paniculata_contig12100.1334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1524bp|location=Sequence derived from alignment at H-paniculata_contig12100:273..1796+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12100:273..1796+ >mRNA_H-paniculata_contig12100.1334.1 ID=mRNA_H-paniculata_contig12100.1334.1|Name=mRNA_H-paniculata_contig12100.1334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at H-paniculata_contig12100:273..1796+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |