mRNA_H-paniculata_contig12023.1293.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12023.1293.1
Unique NamemRNA_H-paniculata_contig12023.1293.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12023.1293.1 vs. uniprot
Match: D7G6E3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E3_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 3.350e-118
Identity = 217/404 (53.71%), Postives = 266/404 (65.84%), Query Frame = 1
Query:    1 SNLHLAPATHALYELCWSFLLPLSLSIIILGNPAIAK----------TSASSAMPNRSAGIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGALMLPRETAAKIAGAVAATYIGGSVNLFAVAAAVGLMGTTSAGGASLFGALAATDIFLMALYFSGLVAAHKTPLLHRVFPASDCNDD------DPLGGIQQTVAPIDNTRSAAIYSGGTGITSGRVTAIARTFSMLALGSVVCVMGNALAKISPLPGTATMVVTLLTVGTTRLLSRLAPHWHAEMSRKAPVMAAVLLNVFFASVGASGRWAQVVGVAPAIFAFASVALGVHVIVVAAGTALLNRFCGAGLGIDDMIVASNANIGGPSTAATFAGLIGQDALIVPAAVWGTVGYAIATTLGVGVWVLLR 1164
            SNL+L PATH++Y+LCWSFLLPLSLS IILG   +A              SS   + S G+                                 G A  LPR TAA++AG + A+YIGGSVNLFAVA+ VG++G   AGG+SL GALAA DIFLM++YFS LVAAHK P L R+FP             D +GG  Q            ++    G T+  +T      ++L +GS +C  GNA+A+ SPLPGT+TM VTLLTVG TR+L+R+AP + A +SR AP +A +LLNVFF SVGASGRW +VVGVAPAIF FA++AL VH+ V+AAG A+LNRF GAGL +DD+ VASNANIGGPSTAATFAGL+G+D L+VPAAVWGTVGYAIATTLGVGVW +LR
Sbjct:   63 SNLNLVPATHSVYDLCWSFLLPLSLSTIILGIRVVAVGEERRSDLNLLGESSGERSSSQGLAGPMGRVGLSFLIGAVGSIAGVAASFRVATTSGGWAFSLPRGTAAQLAGVITASYIGGSVNLFAVASFVGMVGVKLAGGSSLLGALAAADIFLMSVYFSFLVAAHKAPFLCRLFPGPGAQPSAVLKQPDGIGGANQPNVVAAKPGWRELF----GSTAANIT------TLLTIGSAICFFGNAVARRSPLPGTSTMAVTLLTVGATRVLNRVAPGFQARLSRTAPFVATLLLNVFFCSVGASGRWVEVVGVAPAIFIFAALALAVHIAVMAAGAAVLNRFFGAGLSLDDITVASNANIGGPSTAATFAGLLGKDDLVVPAAVWGTVGYAIATTLGVGVWTILR 456          
BLAST of mRNA_H-paniculata_contig12023.1293.1 vs. uniprot
Match: A0A8J5XIZ0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIZ0_DIALT)

HSP 1 Score: 132 bits (332), Expect = 3.960e-31
Identity = 130/406 (32.02%), Postives = 182/406 (44.83%), Query Frame = 1
Query:    1 SNLHLAPATHALYELCWSFLLPLSLSIIILGN---PAIAKTSASSAMPNRSAGIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGALMLPRETAAKIAGAVAATYIGGSVNLFAVAAAVGLMGTTSAGGASLFGALAATDIFLMALYFSGLVAAHKTPLLHRVFPASDCNDDDPLG---------GIQQTVAPIDNTRSAAIYSGGTGITSGR-VTAIARTFSMLALGSVVCVMGNALAKISPLPGTATMVVTLLTVGTTRLLSRLAPHWHAEMSRKAPVMAAVLLNVFFASVGASGRWAQVVGVAPAIFAFASVALGVHVIVVAAGTALLNRFCGA-----GLGIDDMIVASNANIGGPSTAATFAGLIGQDALIVPAAVWGTVGYAIATTLGVGVWVLLR 1164
            SN    PA HA+YE  WS  LP+SL++ +L +   P   +   + A    + G                                  GGA  +PR  AA+++GAV ATY+GG+ N   V+  V L        AS+ GALAA DI  M +YF+ L    ++    R                       G   + AP    R+ A   G   + +GR V A A + +++A+G+  C +G A A+  P  G                 +R   H  AE+       A   LN F+A+VGAS R A++     A   F S AL +HV+V  A  A+ NR          + +++++V SNA IGGPSTAA FA  +G   L+VPAA+WG VGYA+ T LGV  W  LR
Sbjct:   44 SNAGAVPAAHAVYEFAWSGALPMSLTLAVLASTCLPGAPERDGAPADKLAADGESALAGVGAGFAIATVGSLVGVAAAFALALHAPVGGARHMPRALAAQVSGAVLATYVGGAANFAEVSERVALP-------ASVVGALAACDIATMGVYFALLSLLARSERARRWIEGGASASASXXXXXXXARAAPGAAPSDAPRATGRALAAACGLLALLAGRSVDAFAGSSTLVAVGTA-CALGLACARFLPADG-----------------ARRVRHGAAEL-------APACLNFFYAAVGASARPAEIAAAGSAGALFLSTALCLHVLVAGAAAAVANRLPPRVRPRRPIRLNELLVGSNAAIGGPSTAAAFAAPLGGR-LVVPAAIWGIVGYAVGTLLGVHAWSALR 416          
BLAST of mRNA_H-paniculata_contig12023.1293.1 vs. uniprot
Match: W7T4W6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4W6_9STRA)

HSP 1 Score: 133 bits (334), Expect = 8.920e-31
Identity = 124/437 (28.38%), Postives = 194/437 (44.39%), Query Frame = 1
Query:    1 SNLHLAPATHALYELCWSFLLPLSLSIIILGNPAIAKTSASSAMPNRSAGIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW---------------GGAL----------MLPRETAAKIAGAVAATYIGGSVNLFAVAAAVGLMGTTSAGGASLFGALAATDIFLMALYFSGLVAAHKTPLLHRVF-------------------PASDCNDDDPLGGIQQTVAPIDNTRSAAIYSGGTGITSGRVTAIARTFSMLALGSVVCVM----GNALAKISPLPGTATMVVTLLTVGTTRLLSRLAPHWHAEMSRKAPVMAAVLLNVFFASVGASGRWAQVVGVAPAIFAFASVALGVHVIVVAAGTALLNRFCG--AGLGIDDMIVASNANIGGPSTAATFAGLIGQDALIVPAAVWGTVGYAIATTLGVGVWVLL 1161
            SN++L P    +Y+ CW  +LP SLS+ +L   A A T  SS+   +   +I                               W               GG L            P+   AKI  ++A T+IGGS+N F VA +VGL       G  L GA+A  DIFLMAL+F+ L+   + P     F                   P+S  + ++     + T      TR  A+++      +    A++ T        ++ +M    G  + +   +PG A   +T L+ G   L+ RLAP     ++     M+++L ++FFA++GA      +    P I    SV+L VH++    G  + NRF    A + +D+ ++ASNAN+GGP+TAA  AG +G+  L++ AA  GT GYA+AT +GV ++  L
Sbjct:  102 SNINLIPMESPIYDACWGKVLPASLSLSVLLAVAAAGTPTSSSRTTQDQ-LISLNNISSIKSAASSSLTSVPQRNQTWAESSLWKVLLANVFGACGAVIGGLLAFTFASRCQDQFPKPVLAKIVASIATTHIGGSINFFQVARSVGL----DREGQGLLGAVAGADIFLMALHFAALLGIQRNPTGTAAFINRSDIDQTSWKVSVAAFTPSSSISSNETRQCREAT-----ETRPLALHARNAFPHATLTPAVSDTLLPAIFALLLALMVGEGGQFVERKLGVPGAAAGAITALSAGVYGLIRRLAPRCFLRLALPVGAMSSLLFSLFFAAIGAGASLMHLAESGPVIVTLMSVSLLVHLLTTMLGIHVYNRFVPWPARISVDEAVIASNANVGGPATAAAMAGSMGRADLVLSAAATGTAGYAVATFIGVALFKFL 528          
BLAST of mRNA_H-paniculata_contig12023.1293.1 vs. uniprot
Match: A0A0G4FN67_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FN67_VITBC)

HSP 1 Score: 128 bits (321), Expect = 8.410e-29
Identity = 139/463 (30.02%), Postives = 202/463 (43.63%), Query Frame = 1
Query:    1 SNLHLAPATHALYELCWSFLLPLSLSIIILGNPAIAKTSASSAMPN-----RSAGIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGALMLPRETAAKIAGAVAATYIGGSVNLFAVAAAVGLMGTTSAGGASLFGALAATDIFLMALYFSGLVAAHKTPLLHRVFP------ASDCNDD-------------------DPLGGIQQTVA-------PIDNTRSAAIYSGGTGITSGRVTAIARTFSM-----------------------------LALGSVVCVMGNALAKIS----PLPGTATMVVTLLTVGTTRLLSRLA-------PHWHAEMSRKAPVMAAVLLNVFFASVGASGRWAQVVGVAPAIFAFAS-VALGVHVIVVAAGTALLNRFCGA---GLGIDDMIVASNANIGGPSTAATFAG-LIGQDALIVPAAVWGTVGYAIATTLGV 1143
            SNL   P+TH  Y+ CW  LLP+++++++LG P+  + S  S  P      R+ G                                     L +P  +AA+  G +AATYIGG+VN FAVA AVGL G+     ++L G L A DIF M  Y + L  AH    L ++FP      A   ND                      L G Q   A       P+      A  +G    T G  TA     ++                             L L S V  +  A+ + +    P+ G +T V+  + +G   +L RL           +      + ++AAV L +F+  +GA+ R+A ++GV  A     + + L VH + +   +AL+N         L +DD+IVASNAN+GGPSTAA  AG  +G+D L++PA V+GTVGYA AT+LGV
Sbjct:  132 SNLGFMPSTHPAYDWCWGQLLPITIALVLLGAPS--RLSGPSTCPASWEKMRTVGSAYALGAVTTVVGGLLAFLVTTRMPIAF---------LKMPVHSAAQAVGCLAATYIGGTVNFFAVANAVGL-GSGEGSSSALLGGLCAADIFFMGFYLAALKYAHGWIKLRKLFPEREDASAIKANDSPYLLNGYHPEEAPASIEKTQVLVGAQTAKAHHHENGQPVSAVSRNAPLAGSNVPTYGIATAAPTQHTIPSVKDKQQHTGWRQRAGKMAFRALGLMVSLGLASTVLTVSPAIERWARRYVPIDGLSTFVMATVAIGLATILKRLTLSGPPLLDQLYTAAGESSSLLAAVGLQIFYGGIGATARFADLMGVECAAAPLVTGLILLVHTMGLFGISALINSMLKRLQFRLPLDDLIVASNANVGGPSTAAGMAGGSMGRDDLVLPAIVYGTVGYATATSLGV 582          
BLAST of mRNA_H-paniculata_contig12023.1293.1 vs. uniprot
Match: A0A7S4QD29_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QD29_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.200e-28
Identity = 139/460 (30.22%), Postives = 206/460 (44.78%), Query Frame = 1
Query:    1 SNLHLAPATHALYELCWSFLLPLSLSIIILGNPAIAKTSASS------------AMPNRSAGIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGG-----------ALMLPRETAAKIAGAVAATYIGGSVNLFAVAAAVG----LMGTTSAGGASLFGALAATDIFLMALYFSGLVAAHKTPLLHRVFPASDCNDDDPLGGIQQTVAPI-DNTRSAAIYSGGTGITSG-RVTAIARTFSMLALGSVVCVMGNALAKISPL---------PGTATMVVTLLTVGTTRLLSRLAPHWHAEMSRKAPV-----------------MAAVLLNVFFASVGASGRWAQVVGVAPAIFAFASVALGVHVIVVAAGTALLNRFCGAG-------LGIDDMIVASNANIGGPSTAATFAGLIG-----------QDALIVPAAVWGTVGYAIATTLGVGVWVLL 1161
            SNL LAP +H LY+L W+  LP SL++++L +P+ +KT  SS            A  N +  I+                               +             ++ML    AA  AG + A+YIGGSVN FA A  +     L G+     +SL G++AA D+ +M +YF+ L A  K+  L   FP  D       G  Q T A   DN+    +     G+ SG R  +  R  S++A G V  +M  A+ ++S +         PGT    + +L     R+L R+   + A+  +  P                  M+ +   + FAS+G S   ++ V   P+  AFA +AL VHV+    G   +++            LG+D+++VASNA IGGP+TAA FAG IG           +  LIV A +WG VGYA+AT +GV +  LL
Sbjct:  150 SNLGLAPTSHVLYDLSWTRFLPASLALVLLSSPS-SKTLLSSSNDDESDSEGMGATTNDTKNIVSAVSVPFLIGSIGSILGCLLSYFVFSPTQPPFFNKFNLSFSLIPKSVMLQPAEAAAAAGCLCASYIGGSVNFFATARILSESKLLEGSVDM--SSLLGSMAAADLLVMVIYFASLTAGMKSKRLWAWFPGRD------KGPSQATSAETSDNSNRDFVAISSDGVMSGQRQISSQRGSSLIAGGLVGALMAWAIVEVSIVLERALSFFVPGTGCAFIAVLGTVAKRILERVQTIYQAKWKQNNPKGQWFYQLAEGIRQTTSPMSDICFYLLFASIGTSANLSECVRHGPSSLAFAMLALLVHVLFTLYGALCVSKIFPFSRLVKWFPLGLDEVMVASNAAIGGPATAAAFAGKIGPTGSGKKYGKFRHGLIVAATIWGVVGYAVATGVGVTLTKLL 600          
BLAST of mRNA_H-paniculata_contig12023.1293.1 vs. uniprot
Match: A0A4D9CU95_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU95_9STRA)

HSP 1 Score: 127 bits (319), Expect = 4.200e-28
Identity = 101/317 (31.86%), Postives = 155/317 (48.90%), Query Frame = 1
Query:  271 PRETAAKIAGAVAATYIGGSVNLFAVAAAVGLMGTTSAGGASLFGALAATDIFLMALYFSGLVAAHKTPLLHRVFPASDCNDDDPLGGIQQTVAPIDN--------------TRSAAIYSGGTGITSGRVTAIARTFSMLALGSVVCVM----GNALAKISPLPGTATMVVTLLTVGTTRLLSRLAPHWHAEMSRKAPVMAAVLLNVFFASVGASGRWAQVVGVAPAIFAFASVALGVHVIVVAAGTALLNRFCG--AGLGIDDMIVASNANIGGPSTAATFAGLIGQDALIVPAAVWGTVGYAIATTLGVGVWVLL 1161
            P+   AKI  ++A T+IGGS+N F VA +VGL       G  L GA+A  DIFLMAL+F+ L    + P     F      D   L        P  +              TR  A+++      +    A++ T        ++ +M    G  + +   +PG A   +T L+ G   L+ RLAP     ++     M++ L ++FFA++GA      +    P I    SV+L VH++    G  + NRF    A + +D+ ++ASNAN+GGP+TAA  AG +G+  L++ AA  GT GYA+AT +GV ++  L
Sbjct: 3813 PKPVLAKIVASIATTHIGGSINFFQVARSVGL----DREGQGLLGAVAGADIFLMALHFAALFGIQRNPTGTAAFIYRSDTDQTSLKVSVAAFTPSSSISSNETRQCREATETRPLALHARNASPHTTLKPAVSDTLLPAIFALLLALMVGEGGQFVERELGVPGAAAGAITALSAGVYGLIRRLAPRCFLRLALPVGAMSSFLFSLFFAAIGAGASLMHLAESGPVIVTLMSVSLLVHLLTTMLGIRVYNRFVPWPARISVDEAVIASNANVGGPATAAAMAGSMGRADLVLSAAATGTAGYAVATFIGVALFKFL 4125          
BLAST of mRNA_H-paniculata_contig12023.1293.1 vs. uniprot
Match: A0A836CA43_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA43_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.440e-27
Identity = 125/411 (30.41%), Postives = 168/411 (40.88%), Query Frame = 1
Query:    1 SNLHLAPATHALYELCWSFLLPLSLSIIILG------NPAIAKTSASSAMPNRSAGIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGALMLPRETAAKIAGAVAATYIGGSVNLFAVAAAVGLMGTTSAGGASLFGALAATDIFLMALYFSGLVAAHKTPLLHRVFPASDCN---------DDDPLGGIQQTVAPIDNTRSAAIYSGGTGITSGRVTAIARTFSMLALGSVVCVMGNALAKISPLPGTATMVVTLLTVGTTRLLSRLAPHWHAEMSRKAPVMAAVLLNVFFASVGASGRWAQVVGVAPAIFAFASVALGVHVIVVAAGTALLNRFCGAG---------LGIDDMIVASNANIGGPSTAATFAGLIGQDALIVPAAVWGTVGYAIATTLGVGVWVLL 1161
            SNL L PA H  Y+LCWS LLP+SL+ I+LG      NP +  T+       + A                                     A+ LP             TYIGGS NLFAVAAAVGL G        +  A+AA D+FLMA+YF+ LVAA K+  L R F               ++  +G +    AP  +                R   +  T   LA    VC+ G+AL + +  PG AT  +                               +LL +FF ++GA G W                      +  AA  AL +R              L +DD++VASNANIGGP TA  FA +I +  L+V AA WGT GYA+A+++GV ++ LL
Sbjct:  108 SNLGLVPAAHPAYDLCWSVLLPMSLATIVLGCPLTPQNPPVTGTTTQPQPQLQQA----RPRVGVPFAIGAAGSVAGVLAAFAVATCAAAPAAVRLPXXXXXXXXXXXXXTYIGGSANLFAVAAAVGLDG-------GVLSAIAAADVFLMAVYFALLVAAQKSAPLRRAFGXXXXXXXXXXDAQLEERSVGELAAARAPPPSPL--------------RPLPLLLT---LAAARAVCLCGDALQQSTGWPGAATAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLLTLFFGAMGAQGSW----------------------LANAAAAALPSRKPTTNPNQQQPQPLLSLDDVLVASNANIGGPGTAGAFASMIRRPDLVVSAAAWGTAGYALASSVGVALFALL 468          
BLAST of mRNA_H-paniculata_contig12023.1293.1 vs. uniprot
Match: A0A7S3XRP3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRP3_HETAK)

HSP 1 Score: 116 bits (291), Expect = 1.230e-26
Identity = 87/265 (32.83%), Postives = 140/265 (52.83%), Query Frame = 1
Query:  409 LAATDIFLMALYFSGLVAAHKTPLLHRVFPASDCNDDDPLGGIQQTVAPIDNTRSAAIYSGGTGITSGRVTAIARTFSMLALGSVVCVMGNALAKISPLPGTATMVVTLLTVGTTRLLSRLAPHWHAEMSRKAPVMAAVLLNVFFASVGASGRWAQVVGVAPAIFAFASVALGVHVIVVAAGTALLNRFCGAGLGIDDMIVASNANIGGPSTAATFAGLIG-------------QDALIVPAAVWGTVGYAIATTLGVGVWVLLR 1164
            +AA DI +MA+YFSGL+ A ++  L ++FPA +         +  +V    N  +        G  +G   A+      + +G  +  + N LAK+ P PG +T  + L T+    + S ++P    +    A  +A  LLN+FFA++GAS R++ ++G+   I    S+AL VH   + + T ++N+     + + +++VASNANIGGPSTAA FAG +              Q  L+ PA   G++GYAIAT+LGV    ++R
Sbjct:    1 MAAADILVMAVYFSGLLIASRSEALKKIFPAPELRHQ-----VDFSVRASANHGTQPKKPQDLGSKAGHAVAL------ICVGYFLTKLSNFLAKMIPFPGASTGTLCLATLALLSIASVVSPE--QKWRPVAKPLARQLLNIFFAAIGASARFSDIMGIGTPILGLTSIALLVHSFAIGSLTFIVNKLLKTEISLAELLVASNANIGGPSTAAAFAGGLPSPSGGHSGGGGDEQGGLVGPATAAGSIGYAIATSLGVAFASIMR 252          
BLAST of mRNA_H-paniculata_contig12023.1293.1 vs. uniprot
Match: A0A2V0PQB7_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PQB7_9CHLO)

HSP 1 Score: 119 bits (298), Expect = 4.290e-26
Identity = 109/296 (36.82%), Postives = 157/296 (53.04%), Query Frame = 1
Query:  289 KIAGAVAATYIGGSVNLFAVAAAVGLMGTTSAGGASLFGALAATDIFLMALYFSGLVAAHKTPLLHRVFPASDCNDDDPLGGIQQTVAPIDNTRSAAIYSGGTGITSGRVTAIARTFSMLALGSVVCVMGNALAKISPLPGTATMVVTLLTVGTTRLLSRLAPHWHAEMSRKAPV---MAAVLLNVFFASVGASGRWAQVVGVAPAIFAFASVALGVHV-IVVAAGTALLNRFCGAGLGIDDMIVASNANIGGPSTAATFAGLIGQDALIVPAAVWGTVGYAIATT--LGVGVWVL 1158
            +IA A+ A +IGG+VN  AV+ A+ +  +T       FGA  A D  ++ LYF+ L +      L R  PA     D  +GG +            A   GG G    R   +A   + +AL SVVC +G  LA    +P  +  ++T +TV        LA  + A + R AP    +A +L+ VFFA+VGAS   + V+  AP +FAF+++AL VH+ +++A G AL       G    D+++ASNANIGGPST A  A   G  +LIVPA +  T+GYAI T   +G+G WV+
Sbjct:  207 RIAAALTARHIGGAVNYMAVSEALSISPST-------FGAGLAADDLILTLYFTALYS------LARGVPAE--TGDAAVGGAEG---------DKAAGGGGHGSAGERTINVAHGMAAVALSSVVCHVGTQLAAAWGMPSQSITLITGITVA-------LATAFPALLGRIAPSGEGLAVLLMQVFFAAVGASANVSLVLRTAPVLFAFSAIALSVHLGLLLALGRAL-------GFTRRDLLIASNANIGGPSTVAGMAAAKGWRSLIVPAILTSTLGYAIGTFAGMGLGYWVM 464          
BLAST of mRNA_H-paniculata_contig12023.1293.1 vs. uniprot
Match: A0A3M1DIQ5_9GAMM (DUF819 family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DIQ5_9GAMM)

HSP 1 Score: 117 bits (294), Expect = 4.430e-26
Identity = 119/384 (30.99%), Postives = 171/384 (44.53%), Query Frame = 1
Query:    1 SNLHLAPATHALYELCWSFLLPLSLSIIILGNPAIAKTSASSAMPNRSAGIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGALMLPRETAA-KIAGAVAATYIGGSVNLFAVAAAVGLMGTTSAGGASLFGALAATDIFLMALYFSGLVAAHKTPLLHRVFPASDCNDDDPLGGIQQTVAPIDNTRSAAIYSGGTGITSGRVTAIARTFSMLALGSVVCVMGNALAKISPLPGTATMVVTLLTVGTTRLLSRLAPHWHAEMSRKAPVMAAVLLNVFFASVGASGRWAQVVGVAPAIFAFASVALGVHVIVVAAGTALLNRFCGAGLGIDDMIVASNANIGGPSTAATFAGLIGQDALIVPAAVWGTVGYAIATTLGVGV 1149
            SNL++ PA+  +++  W +L+PL++ +++L   A  +     A P   A ++                                    +LP      ++AG   ATY GGS+N  A AAAVGL          L  A  A D  +M LYF  L      P L R FPA     DD  G  +   AP  +  + A                    + LAL + +C  G A    + LPG A + +T LTV     L R     H      A  +  +L+ VFFA++GAS   A V+GV P +FA A + L VH+  +     LL       L + ++++ASNAN+GGP+TAA  A     +AL++PA + GT+GYA  T LGV V
Sbjct:   51 SNLNVIPASAPIFDAVWGYLVPLAIPLLLLH--ADLRRILREAGPTLLAYLLGAAGTVLGAVAAFH----------------------LLPLGAHGWQLAGIFTATYTGGSMNYMATAAAVGLES------GDLLSAGVAADALMMTLYFLLLFTLPAWPALARRFPAYR---DDGEGAEEGREAPPLDLPALA--------------------TALALAAAICAAGEAFETATGLPGGAILTITALTVLLATTLPRAMARLHG-----AHQIGMLLMQVFFATIGASAHIATVLGVGPVLFALAGLILAVHLAFLLLAGYLLR------LRLPELLIASNANMGGPTTAAAMAAAKRWEALVIPAILCGTLGYAGGTFLGVAV 370          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12023.1293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6E3_ECTSI3.350e-11853.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J5XIZ0_DIALT3.960e-3132.02Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
W7T4W6_9STRA8.920e-3128.38Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A0G4FN67_VITBC8.410e-2930.02Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S4QD29_9STRA1.200e-2830.22Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A4D9CU95_9STRA4.200e-2831.86Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836CA43_9STRA3.440e-2730.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XRP3_HETAK1.230e-2632.83Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A2V0PQB7_9CHLO4.290e-2636.82Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A3M1DIQ5_9GAMM4.430e-2630.99DUF819 family protein n=1 Tax=Gammaproteobacteria ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12023contigH-paniculata_contig12023:3385..4551 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.9
Seed ortholog evalue2.3e-98
Seed eggNOG ortholog2880.D7G6E3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Protein of unknown function (DUF819)
EggNOG OGs2S5H7@2759,COG5505@1
Ec32 ortholog descriptionProtein of unknown function DUF819
Ec32 orthologEc-10_001540.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1167
Cds size1167
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928918.111513-CDS-H-paniculata_contig12023:3384..45511622928918.111513-CDS-H-paniculata_contig12023:3384..4551Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12023 3385..4551 +
1691480667.3668334-CDS-H-paniculata_contig12023:3384..45511691480667.3668334-CDS-H-paniculata_contig12023:3384..4551Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12023 3385..4551 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12023.1293.1prot_H-paniculata_contig12023.1293.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12023 3385..4551 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12023.1293.1

>prot_H-paniculata_contig12023.1293.1 ID=prot_H-paniculata_contig12023.1293.1|Name=mRNA_H-paniculata_contig12023.1293.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=389bp
SNLHLAPATHALYELCWSFLLPLSLSIIILGNPAIAKTSASSAMPNRSAG
IIGPMRRVGLVFAIGAAGSLAGVGVAFRLANAGWGGALMLPRETAAKIAG
AVAATYIGGSVNLFAVAAAVGLMGTTSAGGASLFGALAATDIFLMALYFS
GLVAAHKTPLLHRVFPASDCNDDDPLGGIQQTVAPIDNTRSAAIYSGGTG
ITSGRVTAIARTFSMLALGSVVCVMGNALAKISPLPGTATMVVTLLTVGT
TRLLSRLAPHWHAEMSRKAPVMAAVLLNVFFASVGASGRWAQVVGVAPAI
FAFASVALGVHVIVVAAGTALLNRFCGAGLGIDDMIVASNANIGGPSTAA
TFAGLIGQDALIVPAAVWGTVGYAIATTLGVGVWVLLR*
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mRNA from alignment at H-paniculata_contig12023:3385..4551+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12023.1293.1 ID=mRNA_H-paniculata_contig12023.1293.1|Name=mRNA_H-paniculata_contig12023.1293.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1167bp|location=Sequence derived from alignment at H-paniculata_contig12023:3385..4551+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCAACTTACACCTCGCGCCGGCGACCCATGCATTGTACGAGCTCTGCTG GTCGTTCCTACTGCCGCTATCACTGTCCATCATTATTCTTGGAAATCCCG CCATAGCCAAGACGAGCGCTAGCTCAGCCATGCCCAACAGATCGGCTGGT ATTATTGGACCGATGAGAAGGGTGGGATTGGTGTTCGCGATCGGAGCGGC TGGATCTCTTGCAGGCGTAGGCGTGGCATTCCGCTTGGCGAATGCTGGTT GGGGCGGGGCATTGATGTTGCCGAGAGAAACTGCAGCTAAAATCGCGGGA GCAGTGGCCGCGACGTATATCGGCGGTAGCGTGAACCTCTTTGCCGTGGC GGCTGCCGTGGGATTGATGGGCACCACGAGCGCCGGAGGGGCGTCCCTCT TTGGCGCGCTGGCGGCCACGGACATTTTCTTGATGGCGCTGTATTTTTCG GGGCTCGTGGCAGCTCACAAAACTCCCCTCTTGCATCGTGTTTTCCCCGC ATCGGATTGCAACGATGACGATCCCCTTGGTGGCATCCAACAGACGGTGG CTCCAATCGACAATACTCGTTCCGCGGCAATATATAGCGGTGGTACTGGA ATCACGTCTGGGCGGGTCACCGCCATCGCGAGAACGTTCAGCATGTTAGC GCTAGGTAGTGTCGTGTGTGTCATGGGGAACGCACTTGCCAAGATATCGC CCTTGCCAGGAACGGCAACAATGGTTGTGACGCTGCTAACGGTGGGCACG ACACGCTTACTATCTCGACTTGCTCCGCATTGGCATGCCGAAATGTCTCG TAAAGCTCCAGTAATGGCTGCGGTTTTACTTAATGTGTTTTTCGCGTCGG TCGGCGCGTCGGGGCGGTGGGCCCAAGTTGTCGGGGTTGCTCCCGCCATA TTTGCGTTTGCATCTGTGGCATTGGGAGTGCATGTCATCGTTGTTGCTGC CGGGACGGCGTTGTTGAATCGATTTTGCGGCGCGGGATTAGGGATTGACG ACATGATCGTAGCGAGCAACGCGAATATTGGCGGGCCGAGCACCGCTGCT ACCTTTGCCGGTCTAATCGGCCAGGACGCCTTGATTGTACCTGCCGCCGT TTGGGGGACGGTTGGGTACGCGATTGCAACGACTCTTGGAGTTGGCGTAT GGGTATTACTCAGATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig12023:3385..4551+

>mRNA_H-paniculata_contig12023.1293.1 ID=mRNA_H-paniculata_contig12023.1293.1|Name=mRNA_H-paniculata_contig12023.1293.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2334bp|location=Sequence derived from alignment at H-paniculata_contig12023:3385..4551+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCAACTTACACCTCGCGCCGGCGACCCATGCATTGTACGAGCTCTGCTG
GTCGTTCCTACTGCCGCTATCACTGTCCATCATTATTCTTGGAAATCCCG
CCATAGCCAAGACGAGCGCTAGCTCAGCCATGCCCAACAGATCGGCTGGT
ATTATTGGACCGATGAGAAGGGTGGGATTGGTGTTCGCGATCGGAGCGGC
TGGATCTCTTGCAGGCGTAGGCGTGGCATTCCGCTTGGCGAATGCTGGTT
GGGGCGGGGCATTGATGTTGCCGAGAGAAACTGCAGCTAAAATCGCGGGA
GCAGTGGCCGCGACGTATATCGGCGGTAGCGTGAACCTCTTTGCCGTGGC
GGCTGCCGTGGGATTGATGGGCACCACGAGCGCCGGAGGGGCGTCCCTCT
TTGGCGCGCTGGCGGCCACGGACATTTTCTTGATGGCGCTGTATTTTTCG
GGGCTCGTGGCAGCTCACAAAACTCCCCTCTTGCATCGTGTTTTCCCCGC
ATCGGATTGCAACGATGACGATCCCCTTGGTGGCATCCAACAGACGGTGG
CTCCAATCGACAATACTCGTTCCGCGGCAATATATAGCGGTGGTACTGGA
ATCACGTCTGGGCGGGTCACCGCCATCGCGAGAACGTTCAGCATGTTAGC
GCTAGGTAGTGTCGTGTGTGTCATGGGGAACGCACTTGCCAAGATATCGC
CCTTGCCAGGAACGGCAACAATGGTTGTGACGCTGCTAACGGTGGGCACG
ACACGCTTACTATCTCGACTTGCTCCGCATTGGCATGCCGAAATGTCTCG
TAAAGCTCCAGTAATGGCTGCGGTTTTACTTAATGTGTTTTTCGCGTCGG
TCGGCGCGTCGGGGCGGTGGGCCCAAGTTGTCGGGGTTGCTCCCGCCATA
TTTGCGTTTGCATCTGTGGCATTGGGAGTGCATGTCATCGTTGTTGCTGC
CGGGACGGCGTTGTTGAATCGATTTTGCGGCGCGGGATTAGGGATTGACG
ACATGATCGTAGCGAGCAACGCGAATATTGGCGGGCCGAGCACCGCTGCT
ACCTTTGCCGGTCTAATCGGCCAGGACGCCTTGATTGTACCTGCCGCCGT
TTGGGGGACGGTTGGGTACGCGATTGCAACGACTCTTGGAGTTGGCGTAT
GGGTATTACTCAGATGAAGCAACTTACACCTCGCGCCGGCGACCCATGCA
TTGTACGAGCTCTGCTGGTCGTTCCTACTGCCGCTATCACTGTCCATCAT
TATTCTTGGAAATCCCGCCATAGCCAAGACGAGCGCTAGCTCAGCCATGC
CCAACAGATCGGCTGGTATTATTGGACCGATGAGAAGGGTGGGATTGGTG
TTCGCGATCGGAGCGGCTGGATCTCTTGCAGGCGTAGGCGTGGCATTCCG
CTTGGCGAATGCTGGTTGGGGCGGGGCATTGATGTTGCCGAGAGAAACTG
CAGCTAAAATCGCGGGAGCAGTGGCCGCGACGTATATCGGCGGTAGCGTG
AACCTCTTTGCCGTGGCGGCTGCCGTGGGATTGATGGGCACCACGAGCGC
CGGAGGGGCGTCCCTCTTTGGCGCGCTGGCGGCCACGGACATTTTCTTGA
TGGCGCTGTATTTTTCGGGGCTCGTGGCAGCTCACAAAACTCCCCTCTTG
CATCGTGTTTTCCCCGCATCGGATTGCAACGATGACGATCCCCTTGGTGG
CATCCAACAGACGGTGGCTCCAATCGACAATACTCGTTCCGCGGCAATAT
ATAGCGGTGGTACTGGAATCACGTCTGGGCGGGTCACCGCCATCGCGAGA
ACGTTCAGCATGTTAGCGCTAGGTAGTGTCGTGTGTGTCATGGGGAACGC
ACTTGCCAAGATATCGCCCTTGCCAGGAACGGCAACAATGGTTGTGACGC
TGCTAACGGTGGGCACGACACGCTTACTATCTCGACTTGCTCCGCATTGG
CATGCCGAAATGTCTCGTAAAGCTCCAGTAATGGCTGCGGTTTTACTTAA
TGTGTTTTTCGCGTCGGTCGGCGCGTCGGGGCGGTGGGCCCAAGTTGTCG
GGGTTGCTCCCGCCATATTTGCGTTTGCATCTGTGGCATTGGGAGTGCAT
GTCATCGTTGTTGCTGCCGGGACGGCGTTGTTGAATCGATTTTGCGGCGC
GGGATTAGGGATTGACGACATGATCGTAGCGAGCAACGCGAATATTGGCG
GGCCGAGCACCGCTGCTACCTTTGCCGGTCTAATCGGCCAGGACGCCTTG
ATTGTACCTGCCGCCGTTTGGGGGACGGTTGGGTACGCGATTGCAACGAC
TCTTGGAGTTGGCGTATGGGTATTACTCAGATGA
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