mRNA_H-paniculata_contig1201.1288.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1201.1288.1 vs. uniprot
Match: D7FI03_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI03_ECTSI) HSP 1 Score: 273 bits (697), Expect = 8.370e-87 Identity = 149/222 (67.12%), Postives = 175/222 (78.83%), Query Frame = 1
Query: 133 MSSIFDAYDEEFLALTQDLSNNISHITTYETDAAKKRTQLRHVDALVGQAGDLLKQMEIEVRSNQDASTKKELTGKISSYKKTLQSLRGDYQKASEQEEREGLLGGASHAHSQIGASQEQRDRLLQTTERLDSQGRRLEDSKRTMMEIEDVAMEITTELGRNRERIGDVHDKVREVTGMTTSARRLVSSMSRREVQQRFIIYSVAFILIVGVVLAVYYTLKS 798
MSSIF+AYDEEFLALTQD+ NNISH+ TYETDA KKRTQL H+DALVGQAGDLLKQMEIEVRS QDA++KKEL GKI+SYKKTLQSLRGDYQ+A E++EREGLLGG A +Q GASQEQRDRLLQTT+ ELGRNRE+IG+VHDKVR+V+GMTTSARRLV +M+RREVQQR I+Y + +L++G + AVYYT+K+
Sbjct: 1 MSSIFEAYDEEFLALTQDIGNNISHLNTYETDAGKKRTQLTHIDALVGQAGDLLKQMEIEVRSTQDAASKKELQGKIASYKKTLQSLRGDYQRAVEKQEREGLLGGREAAFAQGGASQEQRDRLLQTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGRNREKIGEVHDKVRDVSGMTTSARRLVHNMNRREVQQRCIMYGIGLVLVIGAIAAVYYTMKN 222
BLAST of mRNA_H-paniculata_contig1201.1288.1 vs. uniprot
Match: A0A836CJ32_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ32_9STRA) HSP 1 Score: 231 bits (588), Expect = 2.250e-70 Identity = 126/224 (56.25%), Postives = 170/224 (75.89%), Query Frame = 1
Query: 133 MSSIFDAYDEEFLALTQDLSNNISHITTYETDAAKKRTQLRHVDALVGQAGDLLKQMEIEVRSNQDASTKKELTGKISSYKKTLQSLRGDYQKASEQEEREGLLG---GASHAHSQIGASQEQRDRLLQTTERLDSQGRRLEDSKRTMMEIEDVAMEITTELGRNRERIGDVHDKVREVTGMTTSARRLVSSMSRREVQQRFIIYSVAFILIVGVVLAVYYTLK 795
M+SIF++Y EEF+ LT DLS NISH +TYET+ A + QLR + L+GQA DLLKQME+E RS DA T+++L K++SYKK+L S+R DYQ A E+ ER+GL+ G H +SQ GAS+E R+RLL+T ++L+ Q L +SKRT++EIE VA EITTELGRNRE I H KVREV+ MT +ARRLV +MS+REVQQRFI++ +A +L++ V+L +Y+ +K
Sbjct: 1 MTSIFESYHEEFVTLTTDLSRNISHASTYETNPAARSGQLRQANVLLGQADDLLKQMEVEARSTPDAPTRRDLQAKVASYKKSLASVRRDYQTAVEKTERQGLMSTADGLEHLYSQAGASKEHRERLLKTGDKLNEQSEMLANSKRTILEIEGVAGEITTELGRNRETIQSAHGKVREVSAMTANARRLVHNMSKREVQQRFILWGIALLLLLAVILVIYFAVK 224
BLAST of mRNA_H-paniculata_contig1201.1288.1 vs. uniprot
Match: A0A6H5L3U6_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3U6_9PHAE) HSP 1 Score: 197 bits (502), Expect = 6.550e-58 Identity = 105/129 (81.40%), Postives = 116/129 (89.92%), Query Frame = 1
Query: 133 MSSIFDAYDEEFLALTQDLSNNISHITTYETDAAKKRTQLRHVDALVGQAGDLLKQMEIEVRSNQDASTKKELTGKISSYKKTLQSLRGDYQKASEQEEREGLLGGASHAHSQIGASQEQRDRLLQTTE 519
MSSIF+AYDEEFLALT D+ NNISH+ TYETDA KKRTQL HVDALVGQAGDLLKQMEIEVRS QDA+TKKEL GKI+SYKKTLQSLRGDYQ+A +++EREGLLGG A +Q GASQEQRDRLLQTT+
Sbjct: 1 MSSIFEAYDEEFLALTHDIGNNISHLNTYETDAGKKRTQLTHVDALVGQAGDLLKQMEIEVRSTQDAATKKELQGKIASYKKTLQSLRGDYQRAVDKQEREGLLGGREAAFAQGGASQEQRDRLLQTTD 129
BLAST of mRNA_H-paniculata_contig1201.1288.1 vs. uniprot
Match: A0A7S2V424_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V424_9STRA) HSP 1 Score: 192 bits (488), Expect = 2.770e-55 Identity = 113/235 (48.09%), Postives = 158/235 (67.23%), Query Frame = 1
Query: 82 PR*LKENSHQLGAKL*EMSSIFDAYDEEFLALTQDLSNNISHITTYETDAAKKRTQLRHVDALVGQAGDLLKQMEIEVRSNQDASTKKELTGKISSYKKTLQSLRGDYQKASEQEEREGLLGGASHAHSQIGASQEQRDRLLQTTERLDSQGRRLEDSKRTMMEIEDVAMEITTELGRNRERIGDVHDKVREVTGMTTSARRLVSSMSRREVQQRFIIYSVAFILIVGVVLAVYY 786
P+ L+ H L K M+S+F+ Y EEF +L+ +S NIS ITTYE DA KK+ LR VD ++ QA +LL+QME+E RS D+ ++EL G+ Y TL LR D+ +A + EER L+GGA S G S +QR RLL++ + LD Q +L +++ + E E+VA+EIT ELGRNRE+I VH KVREV MT +ARR++ SM++REVQQ+FIIY VA +L+ + + +YY
Sbjct: 7 PQGLQAREHFLEPK---MASMFEDYCEEFSSLSTQISKNISDITTYEDDAEKKKKLLRTVDTMLVQASELLQQMELEARSESDSGARQELQGRAQQYGTTLDRLRADHARARQDEERRDLMGGAG---SGKGISADQRQRLLKSGQLLDDQTSKLSNARAVIQETEEVALEITQELGRNREKIESVHSKVREVGSMTHTARRIIHSMNKREVQQKFIIYGVALVLLAAICVVIYY 235
BLAST of mRNA_H-paniculata_contig1201.1288.1 vs. uniprot
Match: K3WK26_GLOUD (V-SNARE domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK26_GLOUD) HSP 1 Score: 154 bits (390), Expect = 4.680e-41 Identity = 90/218 (41.28%), Postives = 141/218 (64.68%), Query Frame = 1
Query: 133 MSSIFDAYDEEFLALTQDLSNNISHITTYETDAAKKRTQLRHVDALVGQAGDLLKQMEIEVRSNQDASTKKELTGKISSYKKTLQSLRGDYQKASEQEEREGLLGGASHAHSQIGASQEQRDRLLQTTERLDSQGRRLEDSKRTMMEIEDVAMEITTELGRNRERIGDVHDKVREVTGMTTSARRLVSSMSRREVQQRFIIYSVAFILIVGVVLAVYY 786
M+SIFD YDEE+ ALT D+S IS + +YE KK++ + H+ L+ QA L++QME+EVRS DA+T++EL+ K+ YKK+L SL+ D+ K E+EEREGL G +S +QR+R+ T+++ +++ ++RT+ E E+VA+ IT ELGRNRE+I DKV+ V M +VS MS R+ +QR + + A +++ ++L +Y+
Sbjct: 1 MTSIFDGYDEEYRALTSDISKKISEVASYEDQQEKKKSSILHIGDLLTQASQLVQQMELEVRSL-DAATRRELSKKVDQYKKSLASLKDDHAKIREKEEREGLFGDRDDLAK---SSVDQRNRMKAATDKMKGTTDKIDTARRTVAETEEVALAITDELGRNREKIQATRDKVKGVNDMARRGGNIVSRMSARDKRQRMALMAAAGFIVLAILLLIYF 214
BLAST of mRNA_H-paniculata_contig1201.1288.1 vs. uniprot
Match: W7U7B0_9STRA (Vesicle transport through interaction with t-snares 1a n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7B0_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.390e-40 Identity = 91/221 (41.18%), Postives = 141/221 (63.80%), Query Frame = 1
Query: 133 MSSIFDAYDEEFLALTQDLSNNISHITTYETDAAKKRTQLRHVDALVGQAGDLLKQMEIEVRSNQDASTKKELTGKISSYKKTLQSLRGDYQKASEQEEREGLLGGASHAHSQIGASQEQRDRLLQTTERLDSQGRRLEDSKRTMMEIEDVAMEITTELGRNRERIGDVHDKVREVTGMTTSARRLVSSMSRREVQQRFIIYSVAFILIVGVVLAVYYTLK 795
M+ IF++Y++EF AL D +S++ TYET K ++ LR V Q L+KQM++EVRS DA TK L+ K+ +Y++ L ++ D +A E+EE++ LLG G S QR RLL+T+ERL Q R ++++++ M E E V + I EL NRE+I + KV EV G+T +ARRL+SS+SRRE QQ+ +++ VA L++ ++L +YY+ +
Sbjct: 40 MTDIFESYEDEFRALAGDCQKKLSNLLTYETHGDKIQSLLRQASPQVTQLEGLIKQMKLEVRSL-DAGTKAALSAKVQTYERVLTGVKADLGRAREREEKDALLGAGG------GVSMVQRQRLLETSERLAHQNRTIDNARKVMAETEQVGIHIGEELESNREKIQSIRGKVSEVGGLTNTARRLISSISRRETQQKLMLWGVAASLLIAIILIIYYSSR 253
BLAST of mRNA_H-paniculata_contig1201.1288.1 vs. uniprot
Match: A0A7S4MGJ4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MGJ4_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.920e-40 Identity = 97/217 (44.70%), Postives = 142/217 (65.44%), Query Frame = 1
Query: 130 EMSSI-FDAYDEEFLALTQDLSNNISHIT-TYETDAAKKRTQLRHVDALVGQAGDLLKQMEIEVRSNQDASTKKELTGKISSYKKTLQSLRGDYQKASEQEEREGLLGGASHAHSQIGASQEQRDRLLQTTERLDSQGRRLEDSKRTMMEIEDVAMEITTELGRNRERIGDVHDKVREVTGMTTSARRLVSSMSRREVQQRFIIYSVAFILIVGVVL 774
+MSSI FD YDEEFL+LT+ + +++ + E+ + + L+ L+ Q DLLKQM +E RS DAS K+EL K+ K LQ LR +Y A + +R L G S HS GAS + R+RLL+T+ +L+ Q R L+ ++R M E E+ A+EIT ELGRNRE+I H +V++V+G+T ARR+V SM+RREVQQ+ +Y V+ +LIV +++
Sbjct: 15 DMSSIPFDRYDEEFLSLTEQVRRSLASLEGDIESGGSSVESDLKMTANLLSQCDDLLKQMGLEARSVGDASAKRELLDKVKKCKSKLQGLRSEYNAARNKMDRANLGLGGSAPHSG-GASNDHRERLLKTSGQLEEQNRTLDRARRVMAETEETALEITEELGRNREKIESAHGRVKDVSGLTNRARRIVQSMNRREVQQKLAMYVVSAMLIVVLIV 230
BLAST of mRNA_H-paniculata_contig1201.1288.1 vs. uniprot
Match: A0A8K1FJR7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJR7_PYTOL) HSP 1 Score: 149 bits (375), Expect = 7.500e-39 Identity = 90/218 (41.28%), Postives = 135/218 (61.93%), Query Frame = 1
Query: 133 MSSIFDAYDEEFLALTQDLSNNISHITTYETDAAKKRTQLRHVDALVGQAGDLLKQMEIEVRSNQDASTKKELTGKISSYKKTLQSLRGDYQKASEQEEREGLLGGASHAHSQIGASQEQRDRLLQTTERLDSQGRRLEDSKRTMMEIEDVAMEITTELGRNRERIGDVHDKVREVTGMTTSARRLVSSMSRREVQQRFIIYSVAFILIVGVVLAVYY 786
M+SIFD YDEE+ ALT D+S IS + TYE + KK+T + H+ L+ QA L++QME+EVRS DA+T++EL+ K+ YKK+L SL D++ E+EER+GL G +S + R+++ TE+ ++E + RT E E VA+ IT ELGRNRE+I H+KV+ V M +V MS R+ +Q+ + A +IV ++L +Y+
Sbjct: 1 MTSIFDGYDEEYRALTSDISKKISEVATYEDEKEKKKTSIVHIGDLLTQANQLVQQMELEVRSL-DAATRRELSKKVDQYKKSLASLANDHKTLKEKEERDGLFGDRDDIAM---SSADHRNKMKAATEKSKGTTSKIESALRTADETEKVAIAITEELGRNREKIQAAHNKVKNVNDMARRGGNIVGRMSARDKRQQMALRVAAGFIIVAIILVIYF 214
BLAST of mRNA_H-paniculata_contig1201.1288.1 vs. uniprot
Match: A0A7R9ZE01_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZE01_9STRA) HSP 1 Score: 147 bits (371), Expect = 5.010e-38 Identity = 95/218 (43.58%), Postives = 137/218 (62.84%), Query Frame = 1
Query: 133 MSSI-FDAYDEEFLALTQDLSNNISHIT-TYETDAAKKRTQ--LRHVDALVGQAGDLLKQMEIEVRSNQDASTKKELTGKISSYKKTLQSLRGDYQKASEQEEREGLLGGASHAHSQIGASQEQRDRLLQTTERLDSQGRRLEDSKRTMMEIEDVAMEITTELGRNRERIGDVHDKVREVTGMTTSARRLVSSMSRREVQQRFIIYSVAFILIVGVVL 774
MSSI FD YDEEFL+LT+ + ++S + E++ + L+ L+ Q DLLKQM +E RS DA +K EL GK+ K L LR +Y+ A + ER L +A G S + R+RLL+T ++L++Q R L+ ++R M E ED A+EIT ELGRNRE+I H +VR+V G+T ARR+V SM+RREVQQ+ +Y V+ LI+ +++
Sbjct: 17 MSSIPFDRYDEEFLSLTEQVRRSLSSLEGDLESNGGSSSVESDLKMTANLLSQCDDLLKQMGLEARSAGDAQSKSELLGKVKKCKSKLSGLRSEYEAARTKMERSHLGLDNGNAPRSGGLSNDHRERLLKTNDQLENQNRTLDRARRVMAETEDTALEITEELGRNREKIESAHGRVRDVAGLTNRARRIVQSMNRREVQQKLAMYVVSAALIIVLIV 234
BLAST of mRNA_H-paniculata_contig1201.1288.1 vs. uniprot
Match: A0A6U0HSB3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0HSB3_9STRA) HSP 1 Score: 147 bits (370), Expect = 8.250e-38 Identity = 89/212 (41.98%), Postives = 133/212 (62.74%), Query Frame = 1
Query: 133 MSSI-FDAYDEEFLALTQDLSNNISHITTYETDAAKK-RTQLRHVDALVGQAGDLLKQMEIEVRSNQDASTKKELTGKISSYKKTLQSLRGDYQKASEQEEREGLLGGASHAHSQIGASQEQRDRLLQTTERLDSQGRRLEDSKRTMMEIEDVAMEITTELGRNRERIGDVHDKVREVTGMTTSARRLVSSMSRREVQQRFIIYSVAFILIV 762
MS++ F+ YDEEFL LT+ + ++S + A+ + L+ ++ Q DLLKQM +E R + TK++L K+ K L +LR DY KA + ER L+G +S + GAS ++RLL ++R+ SQ L+ ++R M + E+ AMEITTELGRNRE I H +VREV+G+T ARR+V +MSRREVQQ+ ++Y V +L++
Sbjct: 27 MSTVSFERYDEEFLLLTEQIEKSLSSLDIESNQASSSAESDLKLASNILSQCDDLLKQMSVEARGADNPDTKRDLLHKVRICKAKLANLREDYDKAKSKAERMSLIGSSSGSRVD-GASGSHKERLLANSDRIKSQNETLDRARRVMADTEETAMEITTELGRNRETIQSAHGRVREVSGLTNRARRIVQNMSRREVQQKLVMYMVLAVLVI 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1201.1288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1201.1288.1 >prot_H-paniculata_contig1201.1288.1 ID=prot_H-paniculata_contig1201.1288.1|Name=mRNA_H-paniculata_contig1201.1288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=223bp MSSIFDAYDEEFLALTQDLSNNISHITTYETDAAKKRTQLRHVDALVGQAback to top mRNA from alignment at H-paniculata_contig1201:1596..8815- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1201.1288.1 ID=mRNA_H-paniculata_contig1201.1288.1|Name=mRNA_H-paniculata_contig1201.1288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7220bp|location=Sequence derived from alignment at H-paniculata_contig1201:1596..8815- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1201:1596..8815- >mRNA_H-paniculata_contig1201.1288.1 ID=mRNA_H-paniculata_contig1201.1288.1|Name=mRNA_H-paniculata_contig1201.1288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at H-paniculata_contig1201:1596..8815- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |