mRNA_H-paniculata_contig120.1283.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig120.1283.1
Unique NamemRNA_H-paniculata_contig120.1283.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig120.1283.1 vs. uniprot
Match: D8LDF8_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF8_ECTSI)

HSP 1 Score: 525 bits (1352), Expect = 7.640e-181
Identity = 293/430 (68.14%), Postives = 325/430 (75.58%), Query Frame = 1
Query:  319 MVFVALYQRTSQSYEVALQQYHTRVALGVQPSTRVVDLFNVYTEEFLLLGANFCYLGMVILLYLRMLKRTKPVRLLRALMLAYNSLNVCISLFVACSLLFFKITSRG----GEHG-----------GGFVCNPLRLDLEGQRVAQVFAVFYLQKYLELVDTFLFLLRRSFKQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVLAALGRHSWWSPYLASLQLTQFLVIFFQSATAFFVGPSCGSPDFVKVVLIMYMGSMLGLFALFFAKRSLLGPAEDPGMCGVIKSLENDGRGW---------GNRRIPL-----SWHGNAALDERGHCDVKIPL-LEAPAAAAGAMYSYQLTPIGAPMPSLFVSEEICAISA------------ANGGGS--SFSVRGGKPRATISWMVTTV 1476
            MVFV LYQR SQSYEVAL QY  RVA G+QPSTRVV+L++V TEE LL+ ANF YLG+V+LLYLRML+R +PVRL RALML YN+LNVCISLFVACSLLFFK++SRG    G  G           GGFVCNPLR DL+GQ VA+VFAVFYLQKYLELVDTFLFLLRRSF+QVTFFHLFHHCSITVIVGS+LPFDFNGDMYLPIMLNSIVHVLVYLHYVL+ALG+HSWWS +L  LQLTQF VI  QSATAF+ GP CGSPDFVKVVL++YM S+LGLFALFF KRSLLGPAEDPGMCGVIKSLE D  G          G    P      SWHGN  LDE G  ++ +P    A   A    YSYQLTP+GAPMP LFVSEEI   ++            +N  GS  SFSV+GGKPR T+SW VT V
Sbjct:    1 MVFVRLYQRVSQSYEVALGQYQDRVAAGLQPSTRVVNLYSVGTEEGLLVCANFLYLGLVVLLYLRMLRRKEPVRL-RALMLGYNTLNVCISLFVACSLLFFKVSSRGFNGEGRDGSVVSPGGGGGVGGFVCNPLRTDLQGQMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSILPFDFNGDMYLPIMLNSIVHVLVYLHYVLSALGKHSWWSRHLTKLQLTQFAVILVQSATAFYRGPDCGSPDFVKVVLLLYMISLLGLFALFFVKRSLLGPAEDPGMCGVIKSLEADSSGGIGGTAGKTEGVVAAPAAAAAGSWHGNVLLDEVGAAEIWLPPGFPAETLAGSTTYSYQLTPVGAPMPGLFVSEEIATATSRGSKPISRLRGDSNDAGSCISFSVKGGKPRFTVSWAVTAV 429          
BLAST of mRNA_H-paniculata_contig120.1283.1 vs. uniprot
Match: W7TVB6_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVB6_9STRA)

HSP 1 Score: 288 bits (738), Expect = 1.450e-88
Identity = 181/423 (42.79%), Postives = 246/423 (58.16%), Query Frame = 1
Query:  334 LYQRTSQSYEVALQQYHTRVALGVQPSTRVVDLFNVYTEEFLLLGANFCYLGMVILLYLRMLKRTKPVRLLRALMLAYNSLNVCISLFVACSLLFFKITS---------RGGEHGG-----GFVCNPLRLDLEGQRVAQVFAVFYLQKYLELVDTFLFLLRRSFKQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVLAALGRHSWWSPYLASLQLTQFLVIFFQSATAFFVGPSCGSPDFVKVVLIMYMGSMLGLFALFFAKRSLLG-PAEDPGMCGVIKSLENDGRGWGNRRIPLSWHGNAALDERGHCDVKIPLLEAPAAAAGAMYSYQLTPIGAPMPSLFVSEEICAISAAN---------------------------GGGSSFSVRGGKPRATISWMVTTV 1476
            LY+R ++S  +A   Y  R+A G+QP+T +++LF V  +E LL+  N  YL +   LY  M +R K  +L + ++  YN +NV +S +V+ S+L +K+ S             H        F+CN L L   G  +A VFAV+YLQKY E +DT+ F+LRRSF+QVTF HLFHH SITVIVGS++PFDF GDMY PI++NS+ HV VYLHY    LG + WWS +LA+LQ+ QF  IF QS  AF+ GP CGSPDF K+++++Y GSML LF+ FF KR +L  PA D  MCGV+K   ND    G     LS+ G+  L   G   V +P        +  +Y Y LTP+G+PMP+L+VS E+   S  +                           GG  +F VRGG+P+  +SW V  V
Sbjct:   21 LYRRATESLHIAQTAYEHRIAGGLQPTTPLINLFVVENQEQLLVWMNLGYLVLTCGLYAHMRRREKAHQL-KQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHPG--LASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYILRQPAYD--MCGVMK---NDPAEAG--LSTLSYVGSVRLGPDGSAVVCLPR-HFREGLSSPLYVYHLTPVGSPMPNLYVSREVLWGSGISDGEINRKRGDRTSSEGVVLMEQVVQRAGGSYTFVVRGGRPKGLVSWTVCCV 432          
BLAST of mRNA_H-paniculata_contig120.1283.1 vs. uniprot
Match: A0A7S2FL32_9STRA (Elongation of fatty acids protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FL32_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.540e-73
Identity = 160/387 (41.34%), Postives = 227/387 (58.66%), Query Frame = 1
Query:  343 RTSQSYEVALQQYHTRVALGVQPSTRVVDLFNVYTEEFLLLGANFCYLGMVILLYLRMLKRTKPV--RLLRALMLAYNSLNVCISLFVACSLLFFKITSRGGEHGGGFVCN-PLRLD--LEGQRVAQVFAVFYLQKYLELVDTFLFLLRRSFKQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVLAALGRHSWWSPYLASLQLTQFLVIFFQSATAFFVGPSCGSPDFVKVVLIMYMGSMLGLFALFFAKRSLLGPAEDPGMCGVIKSLENDGRGWGNRRIP--LSWHGNAALDERGHCDVKIPLLEAPAAAAGAMYS--YQLTPIGAPMPSLFVSEEICAISAANGGGS---SFSVRGGKPRATISWMV 1467
            R   SY+ A   +  R+A G QP   +      +T    L+ AN  YL +  +LY  M KRT  V  ++++ +++ YN++ V ++ +V   +L++K+     +  G FVCN   R+D     + +A VF VFY QK+ E  DT+ F+LRRSF+QVTF H+FHH SIT +VG++L FD++GDM+LPI LN++VHVL+Y HY++ ALG  SWW  YL SLQL QF +I  QSA A+  GPSCG+PD+ KV++I+YM SML LF  FF KR +        M GVI +             P  +++ G A L  +G   +++PL      + G+  +  YQLT IGA MP LFV  E+     +N   +   SFSV GGK  A +SW V
Sbjct:   32 RMLASYDSAWSGFEERLAAGQQPPITMK-----WTNFTFLIAANAIYLTVTYILYSVMSKRTTGVNDKMIKKVIMVYNAVCVFLAGYVVVGMLYYKM-----QEPGKFVCNVSARVDDPEAAKFIAWVFWVFYAQKFWEFCDTWFFILRRSFRQVTFLHIFHHSSITFVVGTILKFDYSGDMFLPIFLNALVHVLMYSHYLVTALGIKSWWRQYLTSLQLAQFCLISLQSAVAYSRGPSCGAPDWAKVIMILYMCSMLFLFGKFFVKRYIQKDTS-ANMDGVITT---------KAFTPEYITYQGTAILGAKGTAKIELPLGAKTMTSRGSRVNLAYQLTAIGASMPGLFVESEVDTAPDSNQAKNEAPSFSVSGGKEGAKVSWQV 398          
BLAST of mRNA_H-paniculata_contig120.1283.1 vs. uniprot
Match: A0A7S2B7C1_9STRA (Elongation of fatty acids protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7C1_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.850e-69
Identity = 163/417 (39.09%), Postives = 231/417 (55.40%), Query Frame = 1
Query:  328 VALYQRTSQSYEVALQQYHTRVALGVQPSTRVVDLFNVYTEEFLLLGANFCYLGMVILLYLRMLKRTKPV--RLLRALMLAYNSLNVCISLFVACSLLFFKITSRGGEHGGGFVCNPLRLDL--EGQRVAQVFAVFYLQKYLELVDTFLFLLRRSFKQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVLAALGRHSWWSPYLASLQLTQFLVIFFQSATAFFVGPSCGSPDFVKVVLIMYMGSMLGLFALFFAKRSLLGPAEDPGMCGVIKSLENDGRGWGNRRIPLSWHGNAALDERGHCDVKIP-----LLEAPAAAAGAMYSYQLTPIGAPMPSLFVSEEICA---------ISAANGGGSSFSVRGGKPRATISWMVTTVELQEEQXXXXSRQSPC 1524
            V +  R SQS+         RVA G+QP+  +      +T    LL AN  YL + + LY  M +R + +  +LL+ ++  YN++ V ++ +V  +++ +K+T   G     FVCN        E Q +A VF +FY QK+ E +DT+ FLLRRSF+QVTF H+FHH SIT +VGS+L FD++GDM+LPI LN+ VHVL+Y HY++ A+G  SWW  YL +LQL QF  I  QS  A+  GPSCGSPD+ KV ++ YMGSML LFA FF  R +    +  G+ GVI +   D +         S+HG   L+E G   + +P     +++   +    MY   LTP+GA MP LFVS E+           I  AN   +SF+V GG     + W  T   + ++       Q PC
Sbjct:   16 VGILGRISQSWTENWDLLDERVATGMQPTITLR-----FTSFEFLLYANTVYLLVTLSLYQYMKQRKEGLNDKLLKRIIFYYNAICVGLAGYVVYAMVSYKVTVDAGS----FVCNTSAKPNTPETQYIAFVFWIFYAQKFWEFMDTWFFLLRRSFRQVTFLHIFHHSSITFVVGSILRFDYSGDMFLPIFLNACVHVLMYSHYLVTAMGIKSWWRQYLTTLQLLQFCAISMQSGLAWSRGPSCGSPDWSKVGMMCYMGSMLWLFARFFYHRYIKND-DRIGLEGVITTKAFDPQ-------YASFHGTVELNESGCAQIVLPESAKSVMKRTPSKVNVMYL--LTPVGARMPDLFVSREVFTKNTDATAEGIQEANSS-ASFAVAGGAANKKVCWQFTCEHVSKKVTSNNRPQLPC 412          
BLAST of mRNA_H-paniculata_contig120.1283.1 vs. uniprot
Match: A0A813IE84_POLGL (Elongation of fatty acids protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IE84_POLGL)

HSP 1 Score: 224 bits (570), Expect = 4.080e-64
Identity = 154/383 (40.21%), Postives = 207/383 (54.05%), Query Frame = 1
Query:  355 SYEVALQQYHTRVALGVQPSTRVVDLFNVYTEEFLLLGANFCYLGMVILLYLRMLKRTKPVRL--LRALMLAYNSLNVCISLFVACSLLFFKITSRGGEHGGGFVCNPLRL-----DLEGQR--VAQVFAVFYLQKYLELVDTFLFLLRRSFKQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVLAALGRHSWWSPYLASLQLTQFLVIFFQSATAFFVGPSCGSPDFVKVVLIMYMGSMLGLFALFFAKRSLLGPAEDPGMCGVIKSLENDGRGWGNRRIPLSWHGNAALDERGHCDVKIPLLEAPAAAAGAMYSYQLTPIGAPMPSLFVSEEICAISAANGGGSSFSVRGGKPRATISWMVTTV 1476
            SY      +  R A G QPS         YT    L+  N  YL     LY  M +R +       ++++LAYN++ V ++ +V   +++   T         FVCN         D  G    +AQVF VFY QK+ E +DT+ F+ R+SF+QVTF H+FHHCSI ++VG +LPF+FNGDMYLPI+LN+ VHVL+Y HY+++ALG  + W P+L SLQL QF++I  QSA +   G SCG P F K++L+ YMGSML LF  FF K  +       G  GV+K  E         ++  S  G   LD  G   V++P L            YQ+TPIGAPMP L VS E  A         SF++ GG   A++SW VT V
Sbjct:   16 SYSSEWTLWEARAAAGSQPSLP-------YTGLAFLICMNAFYLLFTFGLYRFMEQRKEAFNCKPFKSILLAYNAICVALAGYVVWGIVYILATEDRS-----FVCNTTVTPGSAEDKSGSAAFLAQVFWVFYAQKFWEFLDTWFFIARKSFRQVTFLHVFHHCSINLVVGLILPFEFNGDMYLPILLNAAVHVLMYSHYLVSALGLPTPWRPFLTSLQLLQFMLIATQSAMSLSRGDSCGGPYFGKIILVGYMGSMLLLFGNFFLKSYIFKKPTGFGD-GVVKRAEAF-------QVTRSHSGRVTLDAEGAGQVELPSL-----FKNGTLHYQVTPIGAPMPELHVSREPEASDC------SFALAGGSANASVSWTVTMV 367          
BLAST of mRNA_H-paniculata_contig120.1283.1 vs. uniprot
Match: A0A7S4FUQ6_9EUGL (Elongation of fatty acids protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FUQ6_9EUGL)

HSP 1 Score: 171 bits (432), Expect = 1.990e-45
Identity = 103/278 (37.05%), Postives = 156/278 (56.12%), Query Frame = 1
Query:  322 VFVALYQRTSQSYEVALQQYHTRVALGVQPSTRVVDL-----FNVYTEEFLLLGANFCYLGMVILLYLRMLKRT---KPVRLLRALMLAYNSLNVCISLFVACSLLFFKITSRGGEHGGGFVCNPLRL-DLEGQRVAQVFAVFYLQKYLELVDTFLFLLRRSFKQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVLAALGRHSWWSPYLASLQLTQFLVIFFQSATAFFVGPSCGSPDFVKVVLIMYMGSMLGLFALFFAK 1128
            V  +L  R S S+E +   Y  R+A G QP   +  L     F        +  AN  YL +  +L + +  R    K   +++ALML YN++ + ++ +VA  +L+ K T   G     F CN + L   +G+ +A    V+Y QKY E +DT++F+L+ S++QV+F H++HH SITV+    L +D NGD YL    N ++HV +Y HY  + L  ++WW  +L ++QL QF+ +F Q+   F  GP CG PD+ KVV+I Y  SML LFA FF +
Sbjct:    5 VTASLMDRVSTSFETSHSAYLLRLANGTQPRYGLEGLPAWLAFLDPHNTIAVGAANVAYLVICAVLTILIKARGSGFKAEGMMKALMLVYNAVCMLLAGYVAVGILYVKATGDPGT----FACNKMDLVTAQGRWLAHFIWVYYAQKYWEYLDTWIFILKASWRQVSFLHVYHHISITVVSAIFLRYDINGDCYLAAFANGLIHVFMYSHYFASVLKINTWWRKHLTTMQLVQFMTVFVQACLMFARGPECGYPDWTKVVMIAYQSSMLVLFAQFFVQ 278          
BLAST of mRNA_H-paniculata_contig120.1283.1 vs. uniprot
Match: A0A4D9CSJ6_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSJ6_9STRA)

HSP 1 Score: 166 bits (419), Expect = 3.670e-44
Identity = 103/238 (43.28%), Postives = 134/238 (56.30%), Query Frame = 1
Query:  847 LPFDFNGDMYLPIMLNSIVHVLVYLHYVLAALGRHSWWSPYLASLQLTQFLVIFFQSATAFFVGPSCGSPDFVKVVLIMYMGSMLGLFALFFAKRSLLG-PAEDPGMCGVIKSLENDGRGWGNRRIPLSWHGNAALDERGHCDVKIPLLEAPAAAAGAMYSYQLTPIGAPMPSLFVSEEICAISAAN---------------------------GGGSSFSVRGGKPRATISWMVTTV 1476
            +PFDF GDMY PI++NS+ HV VYLHY    LG + WWSP+LA+LQ+ QF  IF QS  AF+ GP CGSPDF K+++++Y GSML LF+ FF KR +L  PA D  MCGV+K   ND    G     LS+ G+  L   G   V +P        +  +Y Y LTP+G+PMP+L+VS E+   S  +                           GG  SF VRGG+P+  +SW V  V
Sbjct:    1 MPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSPHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYILRQPAYD--MCGVMK---NDPAEAG--LSTLSYVGSVRLGPDGSAVVCLPR-HFREGLSSPLYVYHLTPVGSPMPNLYVSREVLWGSGISDGEINCKRGDRTSSEGVVLMEQVVQRAGGSYSFVVRGGRPKGLVSWTVCCV 230          
BLAST of mRNA_H-paniculata_contig120.1283.1 vs. uniprot
Match: D8M728_BLAHO (Elongation of fatty acids protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M728_BLAHO)

HSP 1 Score: 141 bits (355), Expect = 9.020e-35
Identity = 88/250 (35.20%), Postives = 141/250 (56.40%), Query Frame = 1
Query:  424 VDLFNVYTEEFLLLGANFCYLGMVILLYL--RMLKRTKPVRLLRALMLAYNSLNVCISLFVACSLLFFKITSRGGEHGGGFVCNPLRLDLEGQRVAQ---VFAVFYLQKYLELVDTFLFLLRRSFKQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVLAALGRHSWWSPYLASLQLTQFLVIFFQSATAFFVGPSCGSPDFVKVVLIMYMGSMLGLFALFFAKRSLLGPAEDP 1158
            V  F +   + +++G  F ++ + +L+ +  R  +R  P    +  M+ YN + VC++ +    +L +           G V +   +D   ++  Q   VF VFY+QKY E +DTF+F+LR+S++QVTF H++HH SIT++V   L    NGD  +P++LNS VH+L+Y HY+ + LG   WW  YL  LQL QF++I   +      G +C  P ++  +LI YM +M+ LF+ F+ KR L G  E P
Sbjct:   19 VSSFPMTDYKSMIIGNIFYFVTIYVLMQIMNRREERFNP----KKFMIVYNFICVCLATYCFYGMLRYYYLD-------GSVLSCSNIDFASEKAKQLVRVFYVFYIQKYWEFLDTFIFILRKSYRQVTFLHVYHHSSITIMVRLFLFAYPNGDNCVPVLLNSFVHMLMYTHYLCSILGFKCWWRSYLTKLQLVQFVLITLVNVVDLVKG-NCQMPHWLNWLLIAYMATMIVLFSRFYIKRYLGGNEEKP 256          
BLAST of mRNA_H-paniculata_contig120.1283.1 vs. uniprot
Match: A0A196S6Y3_BLAHN (Elongation of fatty acids protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S6Y3_BLAHN)

HSP 1 Score: 136 bits (342), Expect = 7.500e-33
Identity = 74/195 (37.95%), Postives = 118/195 (60.51%), Query Frame = 1
Query:  556 MLAYNSLNVCISLFVACSLLFFKITSRGGEHGGGFVCNPLRLDLE-GQRVAQVFAVFYLQKYLELVDTFLFLLRRSFKQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVLAALGRHSWWSPYLASLQLTQFLVIFFQSATAFFVGPSCGSPDFVKVVLIMYMGSMLGLFALFFAKRSL 1137
            M+ YN++ V ++ +    ++ + I  +         C+ +    E  + +A VF +FY+QKY E +DTFLF+LR+S++QVTF H++HH SITV+V   L +   GD  +P++LNS +H+L+Y HY+ + LG   WW   L  LQL QF++I   +      G +C  P ++  ++I YMG+M+ LF+ FF KR L
Sbjct:   60 MIIYNAICVALATYCFVGMVKYYILKKSP-----LFCSSVDFFSEDAKHIAHVFYIFYVQKYWEFIDTFLFILRKSYRQVTFLHVYHHSSITVVVSLFLHYYPAGDNCIPVLLNSFIHMLMYSHYLCSILGVKCWWRSLLTLLQLVQFVLITAANVMDLVKG-TCQMPHWMNWLMIAYMGTMIVLFSKFFMKRYL 248          
BLAST of mRNA_H-paniculata_contig120.1283.1 vs. uniprot
Match: A9VAX9_MONBE (Elongation of fatty acids protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VAX9_MONBE)

HSP 1 Score: 132 bits (331), Expect = 1.350e-31
Identity = 64/160 (40.00%), Postives = 101/160 (63.12%), Query Frame = 1
Query:  658 FVCNP--LRLDLEGQRVAQVFA-VFYLQKYLELVDTFLFLLRRSFKQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVLAALGRHSWWSPYLASLQLTQFLVIFFQSATAFFVGPSCGSPDFVKVVLIMYMGSMLGLFALFFAK 1128
            FV NP  ++ + E  R    +  ++Y+QK+ E +DT +F+ R+S++QVTF H++HHCSIT++  S + +  +GD+  P  LN++VHV +Y HY+ A     +WW P+L  +QL QFL I  Q+    F GP    P+++K++L  YM +ML LF  F+ K
Sbjct:   67 FVGNPDMIKRNTEAGRHLHFYCWLYYIQKFWEFLDTVIFIARKSWRQVTFLHIYHHCSITIVTRSFIVYGLSGDLAWPSFLNALVHVFMYSHYLCATFKIKTWWKPFLTQMQLVQFLAILAQALLGIFGGPGYSYPEWIKLMLAFYMCTMLYLFGSFYIK 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig120.1283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDF8_ECTSI7.640e-18168.14Elongation of fatty acids protein n=2 Tax=Ectocarp... [more]
W7TVB6_9STRA1.450e-8842.79Elongation of fatty acids protein n=1 Tax=Nannochl... [more]
A0A7S2FL32_9STRA1.540e-7341.34Elongation of fatty acids protein n=1 Tax=Florenci... [more]
A0A7S2B7C1_9STRA1.850e-6939.09Elongation of fatty acids protein n=1 Tax=Dictyoch... [more]
A0A813IE84_POLGL4.080e-6440.21Elongation of fatty acids protein n=3 Tax=Polarell... [more]
A0A7S4FUQ6_9EUGL1.990e-4537.05Elongation of fatty acids protein n=1 Tax=Eutrepti... [more]
A0A4D9CSJ6_9STRA3.670e-4443.28Elongation of fatty acids protein n=1 Tax=Nannochl... [more]
D8M728_BLAHO9.020e-3535.20Elongation of fatty acids protein n=1 Tax=Blastocy... [more]
A0A196S6Y3_BLAHN7.500e-3337.95Elongation of fatty acids protein n=1 Tax=Blastocy... [more]
A9VAX9_MONBE1.350e-3140.00Elongation of fatty acids protein n=1 Tax=Monosiga... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig120contigH-paniculata_contig120:30261..43901 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score530.4
Seed ortholog evalue9.7e-148
Seed eggNOG ortholog2880.D8LDF8
KEGG rclassRC00004,RC02888,RC02997
KEGG koko:K10244,ko:K10249
KEGG ReactionR09419,R10825
KEGG Pathwayko00062,ko01040,ko01110,ko01212,map00062,map01040,map01110,map01212
KEGG ModuleM00415
Hectar predicted targeting categoryother localisation
GOsGO:0000038,GO:0003674,GO:0003824,GO:0004312,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006665,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009922,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019367,GO:0019368,GO:0019752,GO:0030148,GO:0030176,GO:0030497,GO:0031224,GO:0031227,GO:0031984,GO:0032787,GO:0034625,GO:0034626,GO:0042175,GO:0042761,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046467,GO:0071704,GO:0072330,GO:0098827,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.fatty acid elongation, saturated fatty acid
EggNOG OGsKOG3071@1,KOG3071@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-15_000780.1
EC2.3.1.199
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Exons8
Model size1611
Cds size1611
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig120.1283.1prot_H-paniculata_contig120.1283.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig120 30261..43901 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928916.7093945-CDS-H-paniculata_contig120:30260..305781622928916.7093945-CDS-H-paniculata_contig120:30260..30578Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 30261..30578 -
1691480666.73838-CDS-H-paniculata_contig120:30260..305781691480666.73838-CDS-H-paniculata_contig120:30260..30578Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 30261..30578 -
1622928916.7258651-CDS-H-paniculata_contig120:34088..343131622928916.7258651-CDS-H-paniculata_contig120:34088..34313Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 34089..34313 -
1691480666.7530081-CDS-H-paniculata_contig120:34088..343131691480666.7530081-CDS-H-paniculata_contig120:34088..34313Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 34089..34313 -
1622928916.7417645-CDS-H-paniculata_contig120:36378..364471622928916.7417645-CDS-H-paniculata_contig120:36378..36447Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 36379..36447 -
1691480666.76064-CDS-H-paniculata_contig120:36378..364471691480666.76064-CDS-H-paniculata_contig120:36378..36447Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 36379..36447 -
1622928916.7604785-CDS-H-paniculata_contig120:37368..375111622928916.7604785-CDS-H-paniculata_contig120:37368..37511Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 37369..37511 -
1691480666.7731113-CDS-H-paniculata_contig120:37368..375111691480666.7731113-CDS-H-paniculata_contig120:37368..37511Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 37369..37511 -
1622928916.776097-CDS-H-paniculata_contig120:38352..384191622928916.776097-CDS-H-paniculata_contig120:38352..38419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 38353..38419 -
1691480666.786315-CDS-H-paniculata_contig120:38352..384191691480666.786315-CDS-H-paniculata_contig120:38352..38419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 38353..38419 -
1622928916.7921586-CDS-H-paniculata_contig120:40942..412121622928916.7921586-CDS-H-paniculata_contig120:40942..41212Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 40943..41212 -
1691480666.8060749-CDS-H-paniculata_contig120:40942..412121691480666.8060749-CDS-H-paniculata_contig120:40942..41212Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 40943..41212 -
1622928916.810373-CDS-H-paniculata_contig120:43366..435691622928916.810373-CDS-H-paniculata_contig120:43366..43569Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 43367..43569 -
1691480666.8234186-CDS-H-paniculata_contig120:43366..435691691480666.8234186-CDS-H-paniculata_contig120:43366..43569Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 43367..43569 -
1622928916.8236413-CDS-H-paniculata_contig120:43585..439011622928916.8236413-CDS-H-paniculata_contig120:43585..43901Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 43586..43901 -
1691480666.8331676-CDS-H-paniculata_contig120:43585..439011691480666.8331676-CDS-H-paniculata_contig120:43585..43901Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig120 43586..43901 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig120.1283.1

>prot_H-paniculata_contig120.1283.1 ID=prot_H-paniculata_contig120.1283.1|Name=mRNA_H-paniculata_contig120.1283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=537bp
GVSLLYISRTTQILQRLATGRIELNCLFFVKHLSTFRLLLPQYQLLCSAR
QSVYYSPVLLHAVRSTAEFGVSFSGCKNYYVVNALVTLRGSAVTSDSSSS
SSSSSTMVFVALYQRTSQSYEVALQQYHTRVALGVQPSTRVVDLFNVYTE
EFLLLGANFCYLGMVILLYLRMLKRTKPVRLLRALMLAYNSLNVCISLFV
ACSLLFFKITSRGGEHGGGFVCNPLRLDLEGQRVAQVFAVFYLQKYLELV
DTFLFLLRRSFKQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSI
VHVLVYLHYVLAALGRHSWWSPYLASLQLTQFLVIFFQSATAFFVGPSCG
SPDFVKVVLIMYMGSMLGLFALFFAKRSLLGPAEDPGMCGVIKSLENDGR
GWGNRRIPLSWHGNAALDERGHCDVKIPLLEAPAAAAGAMYSYQLTPIGA
PMPSLFVSEEICAISAANGGGSSFSVRGGKPRATISWMVTTVELQEEQQQ
QQSRQSPCQGDYGSEKGGVGPGITPANSLSDLSSEDE
back to top

mRNA from alignment at H-paniculata_contig120:30261..43901-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig120.1283.1 ID=mRNA_H-paniculata_contig120.1283.1|Name=mRNA_H-paniculata_contig120.1283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13641bp|location=Sequence derived from alignment at H-paniculata_contig120:30261..43901- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGTGAGCTTGTTGTATATCTCAAGGACTACGCAGATTTTACAGCGCTT AGCAACGGGAAGAATCGAATTGAACTGTCTGTTTTTTGTCAAGCACTTGA GCACTTTCAGGCTGCTTCTCCCCCAGTATCAGTTACTCTGTAGTGCGCGA CAGTCCGTGTATTACAGTCCCGTCCTGTTGCACGCTGTCCGCTCTACAGC AGAGTTCGGGGTGTCATTTAGTGGGTGTAAGAATTATTACGTGGTGAACG CGCTCGTCACATTGCGCGGCAGTGCAGTCACGTCCGATAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGATGGTATTCGTGGCGT TGTACCAGCGGACCTCTCAGAGCTACGAGGTAGCCCTGCAGCAGTACCAT ACGAGGGTCGCGCTTGGGGTGCAGCCTTCTACGAGAGTGGTGGACCTGTT CAATGTCTACACGGAAGAATTTCTGTTGCTAGGAGCCAACTTTTGCTATC TCGGGATGGTGATACTGCTATACCTTCGGATGCTGGTACGTGCATGGACA ACGGTATAGTCTGTACAGTATGCATACAAGCAGTTTCGGCTATGTGGGTG TGTAATCAGTGATCTATTATACTACACGCCCTTAGAGCCAGAGTCGCATG TGGCATCAACAAGATGTCAGCCTTACTATGTCGCACATCAGTTTTTCAGT AGCTGGTGACATGGTATCACATCTGCATTTGTGCGGTTGATACCTACTAA CGCTAGAGCTGTGGGGGGCGTACAGGTGTGTGCGCACCGGTCTGTACGCC CCAGAGAAGACTTTCTCCCCCATCGCCACAGTTTTCCTTCCATCGGAGCA ATGTATTTCGCAACGGATATGCACTTCTTATCCCAAACTTGCACAAGGTT TACAGAACATAGTACCGCTAAGGTAACGGGCAACGGTTTCAGGGTTAACC GTTTCGTTTCTCGTAGATTTGAAGACAAGAGCTGTCCAAGTCTTATGCTT CCAAATTGGAATTCCATTCTGTACATCCCCTACCTGCCCCCCCGCCCTCA CCTCGCATTTTTGTTCATAATTGTCTCCACTTATTCAGAGTATAAAATGA TCATCCCAGCCCAACACTACCTGACCCCCCTCAAGATCCTTATGGCTACA AACTCATATTGTGCGAAGCCGCCCCCCGTCCTCCCTATTCTGTTTTTTCG GTAATTGGATACTGATGCTGATACGCACCTTCAGCTTTGTAGCACAAGCA AGAACAACCTCGGTAGAGAGACAATATACAAAGATAATTAAATCGGAGAT CCCAATCCTTTTGTTCATGTGTGTTACCCGCCCAATCTGACGGAGTGCCG CCCCGAACCTGCTGTGGAGATGCAAAATATCATATGATACCTATTCTACC ACAAATGCGTTTTGACTGCGGTCACTTTGTCAAAGTCATGTATAATGCCG GTCATGCGAAGAGGCCCTGTCTTCGGTGAAAGTCGATTTTCTCCAACACT ATACTATTTATCTGCGCTCGTGACGCCGAAACTCTAAACGTGTACCGTTT GAAATATCCCAAGATCTAGATATGTAGGTGACCGTGCGCTTCCAGCAGAT AAGAGTCTTCGTTCTCGATGAAGATGAGTTTCGCTCAAGGCAGGGTCTTC ACATCACGGGTCAAAATTGAAAGATCCAAGACTGGTCGGTTTGAACAGAC AGAACCTACATCGAATGGTTCAATGACAATATGACAGATATGACATTACC GCGAACTCCTTCCGCGAACCGGTTCCGGCTCTAGTCGTGTGTAAATCGCT CTGGAAAATCCCGCAGGAAATTAGCGGACAAGAAAGTCGCGTGTGGACAT CTTGTTGCACTCTTTAGGTGCTGGTTCGCATTGATCGTAGTATAGAAGCT GGAAAAATCTACTCTTCGGGCGCTCTGACAGCTCTCCACGGGTACTTGGC TCCGGGAGATGGGATGAACCGAACCGGCCGGCGAGTGCACCATATCTGCC ACGGCCAAGTGCTGAGTGTTGGCTCTTGAGTTTGGAGCTGCTTGCGCCAA TTGATTTCACTCGTTGGTCTCGCAGGCTCGTCATTTCGGTTGTAGGTTGG TCTTGTAGCGCAGGATGGGATTACTGTGTTGCTGGTGGCGAAGGATCTTC AGCTGCTGTGGATGGCTTCCGGCATGGTGGCGTCAGCTCTACGCCCCCCC CCACCCCTCCCCCTCCGCCCTCCGTTTTCATTTATTTATGTTTTTTAACC GTTTGACGCGTTTATGCACACCGTGGTGTTACTCAAAAGACAGTCAAGTG AGTTTCAAAGGTTGTCATTTAATGGTGACACCTATCTAATACAGTAATGC GTGGTTGATGGTCATTTTCCACACTTGAAAACAAAACAACCTTAGCACAG TTTGTTTTGAGGTGTTTACTCTACTCTGTTCTGTTCTGTTCTGTTTTTTA AGCACTTAGTATGTACAACGTTCAATAGTTTGATAACGCTTTGGAAAAGT TAACACTTGTTCTAAATCATACAGATCGTTGACAACATTTCTGGGGCTCT AACGACGGTCTTGTTTGAGCCATTTTTTTACAATATTTTGCACTTGTTTT GTGACATCAACACATGTTCGATTGCAGGACATGCTTTTTCTGACGGGTTT CGATTTAACACTCAACCCCCCTCCGCTCGTTTTCAACAGAAACGGACAAA ACCAGTGCGCCTGCTGCGCGCCTTGATGCTGGCGTATAACTCGCTGAACG TGTGCATCTCGCTGTTCGTGGCGTGTAGCCTGCTCTTCTTCAAGATTACG TCGAGGGGCGGGGAGCACGGAGGTGGTTTCGTCTGCAACCCACTCCGACT CGACTTGGAGGGCCAACGCGTGGCGCAGGTATTCGCCGTGTTCTACCTGC AGAAGTACCTGGAGCTAGTGGACACATTTCTATTCTTGCTGCGGAGGTCG TTCAAGCAGGTAACAGAGCGGGGGCGTGACACGGTATAAACAGGCACGCA TACGATACCCCCAGACCCTAGCAGAATACTTGCTGAACATGAATATAGTA AGCCTCCAACACGATTATGTATAGTATCTTCGTATTGAAGAGCGTACTCA TTTTTCGCATGCCATAGTTTTTAGACTGTTGCTGACGCGTCCTCGGGAGG ACGTGGGGGGAGGGAAGGTGTTGGTGGTGGAAGTTGCGCTCAGAACGGTT TTAGACAAAGAAATACAGGGGTCAAGCGGGGGCAATGGGATCTAAATATC TGTCATGTTCCTCGGAGTGTTTTTTTTTTTTTAATATGTGTTCGTCATGC TGTGGGGTTATGCATTTAATAGCTCGGCGTACAATGCATTCATGATCAAC ACCAGCGTATCACAGTAAATGGGGCTTTGTTCCAGGGGGGAAAATCCCGC CCCTTGACGCGCAAACCGGTTGGGATCTATATTGCAGGATACATGCTTTA TGTTAGTATATTACTATGTACATATACAGTAGTGGAGTAGAACCACGGCT ATGCTACGCACGTGGAGTCATACTCTAGTTCGTGCTTTGTCCTTGACCCA CGGACTCGCTGCGCTTGCAGTAGCTCTTTACCTCCCGATGAGGATTCGTT TTTCATGGGTTACCGCAATACGGAGATAGAAATCTGTCACAAAATTTACA ACGGCGACAAAAGACCGTTACCCCCCTTACACCTTACCGTGTTTTTTTTT GCCACTTGGATGATCACGAATACTTGGAGCACTTGCGACGAAAAAAAAAA AGAAAAGAAAAACGTATTTTCCTGAAGGTTTGCCATGAGCATGAGCACAT TTCACTGTATTGTATGTGCCCTGGACCATCTATACTGTTACACACTTGAA TTACTAGAAAAAAATGTGAACAGTAGTGTTATTTAAGAGGGGGAATCAAC ATGAACATTTTATTCTAATATTATGTAACCGCACATTTCTGTCGATCCTT CGTTGAGGCGTTTTTGTTCTTTTTCGTCGTGAGTGCTAGAAATATTTGTA GTCGTGTTCGCATTGGTATTCGTCCGGGGTGTGCAGTCAATCTTTTAATA ATGGATAATGACCATCATGGCAAGTTAACCTGTAAGTGTAGTGTTGCATC CCCCTCCGCAGAAGAAAACAATTTTTTCGAGCAATCCGCGACGAAACAAA AATATAATATTCGCCCTTGTGGAACTCGGCAAAATAGCCCCGTAACTTCG GGAGATGGGGTAAATATATGTAGCTTAAGCTGTTATTTTTGGCTCAAAAT TGAGGGGGCGACTGTTTATTAAAAACACAGGCCTCTGCTAACTCGTAAGA GGATGTATAGGGGCTGACACCTGCCCGGTGCTGGTAGGGTAAGCTTTGAT GTTTTCGCATTAGGGTTAAACCTCAGTAAACGGCGGCTGTAAATATGACG GTGCGCTATGGCACACAAGAAAAAGTGTGGAGCTCTGTATTTCCATTTTA GTCTTATTTGGAGCAATCGTTGTATGCTGATGGTCGGGAGCATATAGAAT AGGCGGGTTCATCCTCATGAATATTCGGGCGAATTATTCTATACGTTCGT CTTGGATGCTCCAATTATTCGTTCTCGTCCGGGGGGAAAGTTTTTATCTT CCGGTGCTACGGGTGAGAAAAAAAATCCTGGAAAATTCTTGGATCCTCGT GTTGCACAAGTCGAAAGTTCCGACGAGTGTACCCAAATGTCACTTTGCTT GGTCTCAGCGTCAAACAGCAGCGTAGGCTTGAGCTCCGCGAATGCACTCT AGGCCTAGCGATTGTGGGTTTAGGGGTTGGGTTATAGGGTTTAAGGCTCG CATTGGTTATACTTGAGTCGGCGCAGCACGAGACCTGAACGGTGAAAATG TACATTTCTCAAAAAGGTCTCGCACCGAAGTCTTGTCGACTTGGAATATG GACCCGAAGTGGTCCAGTCCCGGGTCCAGAGTTGATCGCCCGAAAATCGG CCATCGCCGGCGCGTTAGCTGTTCTACCTGTTGCTCTGGGGTGCAGGGTA TATGCCCTCAGAGTGATCTGTACATGTGCATATATGACCGGGGCGGGTTC GTCGTTTTGCTGACGTTTTTTGCTTGCGTCGACCCCTCTTCGATTTTTTT TTTTTTGTGACTGTTGACACCAGTGAATAAGATTTTAGGTCAGCTGCATG ACCTCAACAGCGGAAGATAAGATGGATTTATTTATTACTGGATTTTGATG GAGCTACTGACTGTGGCGAGTAGATTGATAGACTCGTGAACGAGGCTTAC GGTGGGTGAATTTTCTATTTCATGTTATGACAGGCGTTCACGTGGAAGCC GTTCCATGTTCACCTACAGTACCCCTCCCCCCATTCCTCCCGAGGACATG TGGTCTATGGTCGAACAGCTACGGCATTGATAACATGAGTACGTCCCCAC CCTCCCCCCTCTCCGCGTCACGTGGCGTGTCCTGATCTGTCGACTGGGTG TTTTGTGGGTGACGTCGGGGTTATTATGGCAGGTAACCTTCTTCCATCTG TTCCATCATTGCTCCATCACGGTCATCGTCGGCTCCGTTCTACCCTTCGG TGAGAACCGGTTCTTGGAACGCCTCCTAGCGGTCGTAAAATTTTTCACGT CCTCCCCCCCCTCCTCTCGATAGGTTTGTATAATCTCCCTTGCTCCGCCG CATCGGCATCTGTCCTCGAGTGCACATGACCCCAAAAAGGTGCCAGTTAT TTCTTCATTCAGACATGGTGCTCGTTGAGCGTGAATTAAAGGGGTCCGTC CCGTAACGAGGAGGCCACCCGCACGTTATGTGTACCTATGCGTGCGTGAG CGTTTGGTCTCTTTTCGTGGTGTCTAACTATCCTACGATTGCAAGTGAGA GTTATGCCGCAGCGAAAACGCCTGAAATGTTGTCCCTGTGTGGGGGGGGA GAGGGGTTGGGTGTCAAGACGTAAGTTTATCTCCGTCAGAACATTGGGGA GCACATTTTTGTGTGTATGTTGCGGGGGGGGGGGGGGTATATGTATGTAT TGCTCAACGTACAAGACTCGCAGCGTGAAATTATTGTTTTGTTTTTTCAG ATCGCATGTAGTTTTTTTTATTTTTTATGATTTCGCTCTTACTTCCGATA TATTACTGATCTGTGTCTCGAAGGTTTATTCTTTTTATACTTCGCACCCC CTTGGAACTGGCTGCTCAAATATTCGTTCTCTCTTTCCTCCCACTTCGCA ACATTGGAAGTCTTCTTCGTGTCCTTATTTTCTTGTCTGTATTTTCGTTG CCCTACCTCTCTCATTTGCTCGGTCTGGTCTCGGTTTCGCAACGTACATG TGTAACGTGTACGCCAAAATCAACGGATAATAAGCTATGAATGCTTACAC TCTACAAATGTGTGGCTGCTTATGCTTGATTGTAAAACAGACTTCAACGG AGATATGTACCTACCGATCATGCTGAACAGTATCGTGCATGTGTTGGTCT ACCTGCACTACGTCCTAGCGGCGCTTGGCCGTCACTCCTGGTGGAGCCCC TACTTGGCCTCGCTTCAGCTCACGCAGTTTCTGGTGAGAGAAAGAGAGAC AGAAACAAAGAGGGACAGCGACGGAGAGGTAGAGAGAAAGAAATAGAGGA TGACTGAGAAAAAGAGAACAAGACAGGCAGAGCGAGACAGAGACGGAGAC GGAGATGGAGACGGAGACGGAGACAGATAAACACATAGAGAAGGAACAAA AAGAACCACTAGGCGGCTATCTATAACTATTAATTGAGTATGGCTACGGT TAGCTATGCTCGTTGCAGTCCGTGCGTCTCCTCGACCCACGGACTCGCTG GGGTCGCTACGCTCGCGTGGAGATTCTTTTTTCAGACACGACGTTTTCTT TTTTAGTACAGTCGGGTTTTTTTTCTAAAACGGTGACAACAACAACCACT ACCACCAACACCTTATCCGTAATTAAATTTACAATATTTTCGTCGACAGG CTATTGTTGATCGGCTTGGGTAAAATATCAAGAGTCTATATTGAAGGCCA TGTACTGCAATTTTCGGAACGCTTTTGAGGTGTGCCGGAGGCACGTGTTG CCCTCTTACGGTCTATCTCACGTACGGCAGTTGTATTACCGTGGTAAGGT CATGAACATATGGAAAGACGAAAAACCAAGAGAAGACAAGACGATAATCG AGGAAAATACCTAACGACCCACTGAGGCGTTTCTTTTATTGGAGAATGAT GTGATACCTGTTTCGGGTTTTCGCCCCCACTTGTATTTCTCGGCCTACTC ATTCCCCCTCCCCTCCGCCCTTGTGGCATGGAGCTGCAAAATTGCCGTGT AAAACGCAGCCTGGCTGCCGGTAATACATGAAGCTCCGTCTCCGCATTGT AGGGATGCGACACAAATGGCTGAAAGGCTGCGGCATGCGTTTTTATGAGT ACCCCTCCTCTCCTTATCACGTTATTTACGTCGCTTCAATTCTCGTAAAT ATAGGTCATATTCTTTCAGAGCGCAACGGCCTTCTTCGTGGGGCCGAGCT GTGGATCCCCAGACTTCGTAAAGGTGTGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTATGTAATGGGGGAGGTGGAGGTAGATGGACCTATCTC TCTCCATCTTTATCTCTCTCTCTCTCTCTATATATATATATATACATATA TATCCCTTGCTTGCGTACATGTGTGTGGTTGCACAGCCTCAGTGTGATAT TATATATGTACATGATGTAATATTATAGAGATCGAGGCAATTTTAGTAGC TAGTGAAAAGCTTTTTGTGGTTTTTGCTTTGCAGTGGTGCATTTTTCAAA AGCTCTCACGATTTCGTGTACGCGCGTGCTATAGTTATGGTCCTCGTCAG GTATTAATTACCGTAAAAAAACTGGATAGAATGCCCCGGGGGGTATGATC TCTTTCAAGCTCGAACATCTCGAAAAGCAAGCCCTCCACTGTTCAATGAG CACGTCTATCGACACATCTATCTCGAAGAGATCTTATCAACCACCCTGGT TTCGATTTTGCTAGCACCGTGCTTAGCAGAAAATCGAACTGGAAGAAAGA AGGCCACTGGGGTGTTATCTCCGAACTTTACTGTAGTTGTTCGGTCGCTG CACCTTTGGTTGCTCTAATGTTGCTTATATTGAGCGGAGTTTTAAGGTCG TTTGGGATTATAGGAGCTGCATCGGGTTTTTTTTTAATCCCCGGAAGGCT AAGGTAAAAACCTCTATCCGCTGCTTCCATACCGAAGTATTTCTACATTT CCTTTAACAGAACAGTCATTTGTGCCTCTGCGGGGTAGGTGCCACCCCGG GTCGGCTGAACCAAGTAGGCAGTGTGGGGGTTGCACCCACTTGAAGACCT CTGACTAGACTTCCAGTTATGCTCAGTTCACGAGCTACCCTACCCGTTCG GGCGTAGGTCCGTGGGAGCTGCATCATTTAACATATGTCAGCATGGGTAC AAAGTACTTTTTCTGTTACCGTTGTGTATATGTATCGCGGCATGTGCGAA AGCTGCGTATTAAGACGGTGTGTTTTCAACTAGGAGATAAAACATAAAGT GCCCAAGAAACGATTACTGAAGAAGCTCTGTGGTTGGTAGAAGGGTTCTC TCGTGATTGATCAACGGGCGAAGGGATCGCGCAAAATACCAGTCACAGCG CTTCTTCATTATATCTCTGTGATTAGTCAAAGGTTTCTCTCGTGATTGGT CAACGGACGAAGAGACTGCGGGAGAGACCAAATCACAGAGGTTGTTCAAT TCTCGTGGACGTGAAGAAGCTCCTTTTTTTATAGTAAACGCAGTTCCTGG TATATAATTACTTCACATGAGACATTTACCTTATGCCAGTCGCTACCTTG TGGCAGATTGCCTGCTTCTGTGTCTTGGACTGTTGTGAGTTATTCGTGTC TCACCTGTCATCCCTTATGACAGGCTGCCTTCCACTGTGTCTTCGAGTAC CATGACGCGTCACAGATCACCACACACACGGGGATAGTGGCTACCGCTGC GGATATCTCGGCGAATGCTGGTTCCTACTAACTGCCGTAACCGCAGTATC AACGGACAAACGTCTTCCTCAAGTACAATGCAGTTGGTACTCCAGATGTA TCGCAGTACTGTCTACTGGTACCACGCAACTCTACCGTACTGTGTTCTGC GGTTTCGCATTGTCCCAGCTGACTGCACCTGGTTTTGACCGAAGCAATGC GTATACTGCAGTTTTATCAGCTGAACTAAATACAATCTCCACATGAAGCA CGCACAGCCTTGTGACTGCAGCAAGGAGCCTTTCGATGCGGGGCAGGATT TTGTCAAAAGTGGATACCCATTTCGCACCTAGGGGCAGTCTGCAATACCT TCTGCATATTTTTTAGACAGATGGGGTTGAAATTACCCCGGCCAACGTAA TCGTGTCCGTTTCAAATCGGTATATCGCCTCTACCCCCCCCCATTCCAAA ATGCACCCCTCCGCGTCTTACTTCGACGCTGGACTGTGAAATGTCACCAG TCGCGAAATTTCGCAGTACAGGCCCCCAGGACTCGAACCGTTAACTTTCG CTGACCCCCCTTAATCGCCCTGTTACTGTTCACTATAGGTGGTGCTGATC ATGTACATGGGGTCTATGCTGGGACTATTTGCGCTGTTCTTCGCGAAGCG GTCGTTGCTCGGTCCGGCGGAGGACCCCGGAATGTGCGGCGTGATCAAGT CTCTGGAGAATGACGGTCGGGGGTGGGGGAATCGGCGCATACCGCTGTCG TGGCATGGGAACGCCGCGCTGGACGAGAGGGGGCACTGCGACGTGAAAAT TCCACTTCTCGAGGTGTGTCTGGGTGTAATTTATGGGTAGGAAGTTGATT TTCGGGGTTGCCTTGTGACGAGGTCACTTTCCAATTGTGATGTTTCAGAG TGGAGGAGGGAGCAATGTGTCTATTTATATGTGGCCCAAAAGTGTTTTTG GCGTTCCTCAAGTAAGCTGGTCACTGTCTCAATAATCAGGCAGACCTGGG CACTATGCCCATTCCCTTCGCAGTTATCGCATCCCCACTTTGGGCAGAGG GTGTGCGGATGATGTTCGCCCTGACACTTCGAGCACTTCGTCATCGCCGT CGCAGCCGTTCTCGAAGACGAGGTAGTGGATATTGTAGAGCATTTTGAAA AAGTGGTCGCCAGGAATCCCCTTAGAGTGCGCTTCTTATCGTGAGCTTTT TTCGGGATGGATGTTTGTTTTTGTTCGTCCACTTTTTCTCTGGAAAAAAA ACACTAAAACAAGTTCAACGCGCTACTTGTGGGTGGAACTCCAAGAAAAG ATCAGTCAAAACTAAAGCGATTTTATGTCATGTATGTGCCAGCACGAGGT GTCAAGATATGCCGACTGTTTTTCACTGTTGCGAATGGGCATCGACCTAG GCTTCTCGTTTTCCGTATCAAACATTATATGCGTGCTGTAATCGTCCAAT TCAACGAAGCGTGCGTCAACGTATGGGCGGGACGGATCGCTCTCTTAGCC GTCAGTCTTCCATGCCAAAGACGGCAGCATGGGACAGCCTTGTAGCAGCA GCAGCAGCAGCAGCAGTTTAAGGTCGCCACCACCGCCTAGCGACGGGAAA TTTCTAGCTGATACTGCAAGGTTGCAAGGCTGCAGCCCCGCAACTATCAC CTCGGCTTCGTGTATTTATCTTGGCTGCTTCGGCGGCATAAGATGTTGGG CGTCGTGTTGCATGATGCGTATTGACTGAACCCTACCATCCCATTGAGAC TTCCTCCCCTAGCGTGCTGCAGACCCTGAACAACAAATTTACCGTTCCGT CACTTTCGCCCCAAATTTTAACCTGGCGAAATTGGGGATACTTTCAGCTT ACTTCGGCCGTTTGGTGGGGGTCTCGCAAACTGGGGGTCGGTTTGCCTCC AAACATTCGTTATAAAGGGTGACGTGCTTTGTTGGTAATCTTTGACCATG TTGCTTATCATAAACGTTAGTCTTGGAGACACCCACCCAGGATTGCCCAC CTAACGTAGAAACTCCTCGATAACTTGTACATTTTTTTTTTCGGGGCGAA AATACCTCGAGAAACATTTTATGCAGGAAAATAGACCAATGAAAGAGGTC CGAAGGCAATTTTTTAACCCATTGGTGATGAAGGATTTCAAGAGTCAACC CTTTAGTTCTATCCCCCTCTCCTTGAGTCTGGCTCTTGTGGCTTGGAGCT GTAAAACTACCGTATACAGGGCACGAGGGTGTTCATGTGGTATATCCTGT GAGCGTGTTGACCTTTGTCGAAGAGATTCAAACACTATAGGATGGCTGGC TGCTGAACCGGTGATGGTAATGCCCAAGAGCAAGAATGCTCATGACCGCG TATTCCATCAGGAGGTACATAAGCAGAGTATACTCAAAGTGTCTCGCACA TGAAATAGTGCGCTCGCTATGTCTGGAGCGACATTGTCTATACGTGCGTG GGAAGAGGTCGAAGTCCTGTGGGTTACTTGGGGTGTAGGCACGCCTGCTA TATGCATAACATTTGGTCATCCGGGATGCCCAAACCCTCAGTGCAGAATC CGGTCGGCGTAGAACGCAAGGGTGGATGATTAATGGCTAGTATCACCCTT GTGAAACGCGGCCTGGCCGGCAATAACCCGGCAAGCTCTGTCCCAGCATT GTAGGGATGCAAGATCAATAATCGAAAGACTACGGCATGCTTTTTTCATG CGTACACTCCCCCTTAGCTCTAATGATATGGCTGCTGATACGTGTGTACA AGTGATGTTTGAAGTGAGATTCATAACCTCAATATGGGTGAAAAGGGAGT GTATCACATGAGCGTTCAGAGTTATAGTTCAACTAACTGTGGCAAGTGGG TTTACTTACGAATCAGAATTCCCGTTGGTGCAGCGGAGAGTTGTTTTCAT TTTCATGGTGTTGGTCGTTCGTATCATATCATATCAACACTATTTCACGT TTTACCTAGAGTGCACATCCGAGTGATACAGAGACACTCGGGTTGCCGTA GCCCGTGTCGTGTCTGGTCGGAGAGGAACGAGAATAAGTCCCCCTCCCTC CCTCTCCTGCTCCCCCCACCCTTTTCTTGCTTGCCATGACCCTGCGTTGG ATCGGGGTATCATATCCAACGTTCCGCTAACGGTTGAGGTTAGCAACGTA AATATATATTTCGCCATGGTGCGCTTTGAGTTATTCTGATGGTCATCTCC GGACGGGTGTAGGTGGGGGTCGGTCCATATTAGAGTGAGAGTCCCACATA AGAACGGTACTTTCGATTAGTACGAGGCCCTACTTAAATGTGGTCAAAAT CGCTACGCAAAACTCCGATTCTCTTTTGTGATTTACCGCACTAAAGTGGG ATTAAAATCACAATGTTCACTGTAAGTCACTACACTTTACACGCCCAGTT TCTTATTTTTGCCCGTTGTCAACTGCGAGCCGTCGCAGTGTTTGCGCTCA TCGGATTTGTGTTGTTTATTCCTTCCTTTGCACAAGTGTGTGGATATAGT GTAGCGGACTACAGGCAGTGTTTGGATTCCAGTTGAGTGGTGTACCGCAC TCAACCGGATTATTGCGGCTTACCACTTTCATGCCGTAAAATTCACCTGG AAAATCGCCGTACTAAAGTGGGACCCCTATTCAAGTCCATCCGGCAAGAG AGATCTTTCTCCACGAGTAATGTAATCTACCTACTGTCATGTTCCAGCAC CTCTTACCACCCTGTCCGTACACACTTGATCAAAAATCGAAAGCAGTAAT GTAATTGTTTTTACACAAGTGGGATATGTCGTGATCTTTATAGCTAGTCG GTGAATAATCCCATGCACCAGTGGCCGGCAACAAACACGGGCCACATATG CATCGTACTTTTTGCAGCGTGTACGGAGTAGCTCCGAACAAGATATTTCA TGCCCCGTACGGGTTGTACATGTACCGAGCCCCTCTCACGCAGCATGTAC ACTTCATGAACGGCGTGTACATGCATTGTTAGTACGATTCATCGGTCAAA TAGAATCATGGGCATCGTATGGATCTCATGAGCTGTACTGTCCGATGTGC ATATATGTTTTGAAGTTATTTCAAGGCACCAAAAAGAGAAAAAATCATCA TGGGAACAAAAACTTTTGCAGCGTTTTTTTACGTCGTATATAATATATGT CGGGTACAGGCTGCAACGCTGCACGAGCCAGACATGAACTTTAGTGGTGT GTTTTTCAAATTTCATTTATAAAAAAAAAATCACGGTGTGCCCGTCTGCT CGCCCCGCCCTGTACCACTCCACCACCTCTACGACTCTTCCTTCCTATTT TCCAATTCCTTGACTTAAAACAGGCGCCTGCTGCTGCGGCAGGAGCCATG TACAGCTACCAGCTCACCCCCATCGGTGCCCCCATGCCGAGTCTCTTTGT TTCAGAAGAGATTTGCGCGATAAGTGCTGCGAACGGTGGCGGGTCCAGTT TTTCAGTCAGGGGGGGCAAGCCCCGAGCGACGATATCTTGGATGGTTACT ACGGTTGAGCTCCAAGAGGAGCAACAGCAGCAGCAGAGTCGGCAGTCTCC ATGTCAGGGGGATTACGGGTCGGAGAAGGGGGGCGTGGGACCAGGGATTA CCCCGGCGAATTCGCTCAGTGACTTGAGCAGTGAGGACGAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig120:30261..43901-

>mRNA_H-paniculata_contig120.1283.1 ID=mRNA_H-paniculata_contig120.1283.1|Name=mRNA_H-paniculata_contig120.1283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3222bp|location=Sequence derived from alignment at H-paniculata_contig120:30261..43901- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGTGAGCTTGTTGTATATCTCAAGGACTACGCAGATTTTACAGCGCTT
AGCAACGGGAAGAATCGAATTGAACTGTCTGTTTTTTGTCAAGCACTTGA
GCACTTTCAGGCTGCTTCTCCCCCAGTATCAGTTACTCTGTAGTGCGCGA
CAGTCCGTGTATTACAGTCCCGTCCTGTTGCACGCTGTCCGCTCTACAGC
AGAGTTCGGGGTGTCATTTAGTGGGTGTAAGAATTATTACGTGGTGAACG
CGCTCGTCACATTGCGCGGCAGTGCAGTCACGTCCGATAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGGGGTGAGCTTGTTGTATATCTCAAGGACTACGC
AGATTTTACAGCGCTTAGCAACGGGAAGAATCGAATTGAACTGTCTGTTT
TTTGTCAAGCACTTGAGCACTTTCAGGCTGCTTCTCCCCCAGTATCAGTT
ACTCTGTAGTGCGCGACAGTCCGTGTATTACAGTCCCGTCCTGTTGCACG
CTGTCCGCTCTACAGCAGAGTTCGGGGTGTCATTTAGTGGGTGTAAGAAT
TATTACGTGGTGAACGCGCTCGTCACATTGCGCGGCAGTGCAGTCACGTC
CGATAGCAGCAGCAGCAGCAGCAGCAGCAGCACGATGGTATTCGTGGCGT
TGTACCAGCGGACCTCTCAGAGCTACGAGGTAGCCCTGCAGCAGTACCAT
ACGAGGGTCGCGCTTGGGGTGCAGCCTTCTACGAGAGTGGTGGACCTGTT
CAATGTCTACACGGAAGAATTTCTGTTGCTAGGAGCCAACTTTTGCTATC
TCGGGATGGTGATACTGCTATACCTTCGGATGCTGCGATGGTATTCGTGG
CGTTGTACCAGCGGACCTCTCAGAGCTACGAGGTAGCCCTGCAGCAGTAC
CATACGAGGGTCGCGCTTGGGGTGCAGCCTTCTACGAGAGTGGTGGACCT
GTTCAATGTCTACACGGAAGAATTTCTGTTGCTAGGAGCCAACTTTTGCT
ATCTCGGGATGGTGATACTGCTATACCTTCGGATGCTGAAACGGACAAAA
CCAGTGCGCCTGCTGCGCGCCTTGATGCTGGCGTATAACTCGCTGAACGT
GTGCATCTCGCTGTTCGTGGCGTGTAGCCTGCTCTTCTTCAAGATTACGT
CGAGGGGCGGGGAGCACGGAGGTGGTTTCGTCTGCAACCCACTCCGACTC
GACTTGGAGGGCCAACGCGTGGCGCAGGTATTCGCCGTGTTCTACCTGCA
GAAGTACCTGGAGCTAGTGGACACATTTCTATTCTTGCTGCGGAGGTCGT
TCAAGCAGAAACGGACAAAACCAGTGCGCCTGCTGCGCGCCTTGATGCTG
GCGTATAACTCGCTGAACGTGTGCATCTCGCTGTTCGTGGCGTGTAGCCT
GCTCTTCTTCAAGATTACGTCGAGGGGCGGGGAGCACGGAGGTGGTTTCG
TCTGCAACCCACTCCGACTCGACTTGGAGGGCCAACGCGTGGCGCAGGTA
TTCGCCGTGTTCTACCTGCAGAAGTACCTGGAGCTAGTGGACACATTTCT
ATTCTTGCTGCGGAGGTCGTTCAAGCAGGTAACCTTCTTCCATCTGTTCC
ATCATTGCTCCATCACGGTCATCGTCGGCTCCGTTCTACCCTTCGGTAAC
CTTCTTCCATCTGTTCCATCATTGCTCCATCACGGTCATCGTCGGCTCCG
TTCTACCCTTCGACTTCAACGGAGATATGTACCTACCGATCATGCTGAAC
AGTATCGTGCATGTGTTGGTCTACCTGCACTACGTCCTAGCGGCGCTTGG
CCGTCACTCCTGGTGGAGCCCCTACTTGGCCTCGCTTCAGCTCACGCAGT
TTCTGACTTCAACGGAGATATGTACCTACCGATCATGCTGAACAGTATCG
TGCATGTGTTGGTCTACCTGCACTACGTCCTAGCGGCGCTTGGCCGTCAC
TCCTGGTGGAGCCCCTACTTGGCCTCGCTTCAGCTCACGCAGTTTCTGGT
CATATTCTTTCAGAGCGCAACGGCCTTCTTCGTGGGGCCGAGCTGTGGAT
CCCCAGACTTCGTAAAGGTCATATTCTTTCAGAGCGCAACGGCCTTCTTC
GTGGGGCCGAGCTGTGGATCCCCAGACTTCGTAAAGGTGGTGCTGATCAT
GTACATGGGGTCTATGCTGGGACTATTTGCGCTGTTCTTCGCGAAGCGGT
CGTTGCTCGGTCCGGCGGAGGACCCCGGAATGTGCGGCGTGATCAAGTCT
CTGGAGAATGACGGTCGGGGGTGGGGGAATCGGCGCATACCGCTGTCGTG
GCATGGGAACGCCGCGCTGGACGAGAGGGGGCACTGCGACGTGAAAATTC
CACTTCTCGAGGTGGTGCTGATCATGTACATGGGGTCTATGCTGGGACTA
TTTGCGCTGTTCTTCGCGAAGCGGTCGTTGCTCGGTCCGGCGGAGGACCC
CGGAATGTGCGGCGTGATCAAGTCTCTGGAGAATGACGGTCGGGGGTGGG
GGAATCGGCGCATACCGCTGTCGTGGCATGGGAACGCCGCGCTGGACGAG
AGGGGGCACTGCGACGTGAAAATTCCACTTCTCGAGGCGCCTGCTGCTGC
GGCAGGAGCCATGTACAGCTACCAGCTCACCCCCATCGGTGCCCCCATGC
CGAGTCTCTTTGTTTCAGAAGAGATTTGCGCGATAAGTGCTGCGAACGGT
GGCGGGTCCAGTTTTTCAGTCAGGGGGGGCAAGCCCCGAGCGACGATATC
TTGGATGGTTACTACGGTTGAGCTCCAAGAGGAGCAACAGCAGCAGCAGA
GTCGGCAGTCTCCATGTCAGGGGGATTACGGGTCGGAGAAGGGGGGCGTG
GGACCAGGGATTACCCCGGCGAATTCGCTCAGTGACTTGAGCAGTGAGGA
CGAGGCGCCTGCTGCTGCGGCAGGAGCCATGTACAGCTACCAGCTCACCC
CCATCGGTGCCCCCATGCCGAGTCTCTTTGTTTCAGAAGAGATTTGCGCG
ATAAGTGCTGCGAACGGTGGCGGGTCCAGTTTTTCAGTCAGGGGGGGCAA
GCCCCGAGCGACGATATCTTGGATGGTTACTACGGTTGAGCTCCAAGAGG
AGCAACAGCAGCAGCAGAGTCGGCAGTCTCCATGTCAGGGGGATTACGGG
TCGGAGAAGGGGGGCGTGGGACCAGGGATTACCCCGGCGAATTCGCTCAG
TGACTTGAGCAGTGAGGACGAG
back to top