mRNA_H-paniculata_contig11993.1262.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig11993.1262.1 vs. uniprot
Match: D7G0M7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0M7_ECTSI) HSP 1 Score: 311 bits (796), Expect = 1.830e-105 Identity = 148/207 (71.50%), Postives = 166/207 (80.19%), Query Frame = 1
Query: 1 KNKSDEVFDGSYRPPPSDPRLTTVNRMELTKSIHSEGYSLRRPKEGFDRLTANRTNYSLG-NIKRDFSTATAELQTKHPCEHPAVEQPAVGGSTLSDGSYRVDELARDSLRRGGGGGEGALGVRFDIINGTPDPKARDKVAMRAGPRVTLNKVEKELLHPTDGWGDIPGGMCIDVINGRDRLKHVAPERSADVPVRFDTAVGRTRPW 618
KN SDEVFDGSY PPPSDPR +TV RMELTKS+H+ GY++RRPKEGFDRL ANRTNYSLG + + TATAELQ KHP + P V+QPAVGGSTL DGSYR+D ARDS+RRGGGGGEG LGVRFD+ING D AR KVAMR GPR TLN EKE+LHPTDGWGD+PGGM +D++ G+DR K PER A PVR DT GRTRPW
Sbjct: 4 KNASDEVFDGSYSPPPSDPRFSTVTRMELTKSVHTPGYAIRRPKEGFDRLNANRTNYSLGQHPTTELKTATAELQMKHPRDQPRVDQPAVGGSTLRDGSYRLDTSARDSVRRGGGGGEGVLGVRFDVINGREDEGARGKVAMRTGPRRTLNNAEKEVLHPTDGWGDVPGGMYVDILTGKDRRKFDVPERGAGAPVRSDTVSGRTRPW 210
BLAST of mRNA_H-paniculata_contig11993.1262.1 vs. uniprot
Match: A0A7S4DHZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHZ4_HETAK) HSP 1 Score: 116 bits (290), Expect = 2.790e-29 Identity = 72/172 (41.86%), Postives = 92/172 (53.49%), Query Frame = 1
Query: 1 KNKSD-EVFDGSYRPPPSDPRLTTVNRMELTKSIHSEGYSLRRPKEGFDRLTANRTNYSLGNIKRDFSTATAELQTKHPCEHP-AVEQPAVGGSTLSDGSYRVDELARDSLRRGGGGGEGALGVRFDIINGTPDPKARDKVAMRAGPRVTLNKVEKELLHPTDGWGDIPGGM 510
KNKSD E G Y P D TV + ELTKS H+ GYS +P +GFDR TANRTNYSLG+ ++ +A LQ HP E EQP +GG +G Y D + +++RGG G G L + FDI+ G P R R GPRV+ N +K+ G + GG
Sbjct: 6 KNKSDKESIQGGYSYIP-DQHYKTVAQAELTKSTHTHGYSKAKPGDGFDRQTANRTNYSLGSHSIEYKSANHALQLSHPEERSHRPEQPQLGGWNRGNGHYHQDIESMRTIQRGGAGAGGVLQLNFDIVTGADKPHVRADNLRRFGPRVSENVRQKQ-----QDTGGVGGGF 171
BLAST of mRNA_H-paniculata_contig11993.1262.1 vs. uniprot
Match: A0A7S2D1K6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D1K6_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.870e-28 Identity = 79/211 (37.44%), Postives = 111/211 (52.61%), Query Frame = 1
Query: 1 KNKSD-EVFDGS---YRPPPSDPRLTTVNRMELTKSIHSEGYSLRRPKEGFDRLTANRTNYSLGNIKRDFSTATAELQTKHPCEHPAVEQPAVGGSTLSDGSYRVDELARDSLRRGGGGGEGALGVRFDIINGTPDPKARDKVAMRAGPRVTLNKVEKELLHPTDGWGDIPGGMCIDVINGRDRLKHVAPERSADVPVRF-DTAVGRTRPW 618
KN SD E F G Y+ P R T + ++HS Y PK + RLTA RTNY+LG + ++ T+ PC V+ A G + Y D AR+S+ RGGGGGEG+LG RFDIING DP R++V+MR G RV++NK E D +GD +++++G+ R +H P + + +R D + TRPW
Sbjct: 74 KNHSDLESFQGGPPKYKDPNVVYRTTKASDFNHESTLHSNEYMKSEPK--YTRLTAGRTNYTLGAYEGKLAS-TSHTHHAPPCPIERVKGQATIGGWQTGNKYHTDIHARESIMRGGGGGEGSLGTRFDIINGKDDPSFRNRVSMRTGARVSVNKREP-WSQGADRYGD--HHEPVNILSGQPRTRHNPPPQQNALQLRRPDQPLLATRPW 278
BLAST of mRNA_H-paniculata_contig11993.1262.1 vs. uniprot
Match: A0A7S2F937_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F937_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.350e-28 Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 1
Query: 130 KEG--FDRLTANRTNYSLGNIKRDFSTATAELQTKHPCEHPA-VEQPAVGGSTLSDGSYRVDELARDSLRRGGGGGEGALGVRFDIINGTPDPKARDKVAMRAGPRVTLNKVEKELLHPTDGWGDIPGGMCIDVINGRDRLKHVAPERSADVPVRFDTAVGRTRPW 618
KEG +DR+++ +TNYSLG R A + + HP + P V+Q +GG SDGSY + + DS+ RGGGGGEG+LGV+F+I+N DP ARD+VAMR G RV++NK E D +GD +++ + P ++A +R D V RTRPW
Sbjct: 110 KEGPAYDRISSCKTNYSLGEY-RPPGPAISTTHSHHPYKMPTDVQQANIGGWKRSDGSYHCEHESNDSIVRGGGGGEGSLGVQFNIVNNASDPGARDRVAMRTGARVSVNKREPWSAG-CDAYGDPGPDGPVNIFGKARQRPQAPPHQTAQALLRPDHDVLRTRPW 273
BLAST of mRNA_H-paniculata_contig11993.1262.1 vs. uniprot
Match: A0A7S2S3K8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3K8_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.450e-28 Identity = 81/216 (37.50%), Postives = 118/216 (54.63%), Query Frame = 1
Query: 1 KNKSD-EVFDGSYRPPPSDPR----LTTVNRMELTKSIHSEGYSLRRPKEGFDRLTANRTNYSLGNIKRD---FSTATAELQTKHPCEHPAVEQPAVGGSTLSDGSYRVDELARDSLRRGGGGGEGALGVRFDIINGTPDPKARDKVAMRAGPRVTLNKVEKELLHPTDGWGDIPGGMCIDVINGRDRLKHVAPER--SADVPVRFDTAVGRTRPW 618
KN SD + G+ P DPR T + S SE Y RP FDRL+A++TNY + + F T T+ + HP P EQ A+GG S G Y +ELA+++++RGGGGGEG+LGVRF+I+ P+AR+ ++ GPRV++NK E ++ +GD M ++I G+ AP+ AD+ +R + A+ RTRPW
Sbjct: 67 KNASDKDSIQGAEGGPYHDPRKVFKTTFASDYHSGASALSEKYVRERP--AFDRLSASKTNYEITSPLETIPPFKT-TSHVLHAHPKTRPQPEQAAIGGWRTSTGEYCTNELAKETVKRGGGGGEGSLGVRFNIVTNEGAPRARETALLQTGPRVSMNKKEP-WRQGSNRFGD--SDMQTNIITGKQHAHFQAPKPLGPADL-LRPNEAIARTRPW 275
BLAST of mRNA_H-paniculata_contig11993.1262.1 vs. uniprot
Match: A0A8J2T189_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T189_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.920e-21 Identity = 72/210 (34.29%), Postives = 102/210 (48.57%), Query Frame = 1
Query: 1 KNKSDE--VFDGSYRPPPSDPRLTTVNRMELTK--SIHSEGYSLRRPKEGFDRLTANRTNYSLGNIKRDFSTATAELQTKHPCEHPAVEQPAVGGSTLSDGSYRVDELARDSLRRGGGGGEGALGVRFDIINGTPDPKARDKVAMRAGPRVTLNKVEKELLHPTDGWGDIPGGMCIDVINGRDRLKHVAPERSADVPVRFDTAVGRTRPW 618
KN SD+ V D + PP T+ N E + + S Y R P FDR ++ TNYSLG + T T ++ HP P V+Q +GG DGSY++++ A DS++RGGGGG G LG+ F++I G P R+ G R TLN V + HP D + + RD P ++ ++ R + RTRPW
Sbjct: 51 KNASDKEAVIDSTGFPP----CFTSTNTAEFNRDTTTFSRRYVKREP--CFDRQSSCATNYSLGEAPFETKT-TNDVLFAHPLTKPRVDQGEIGGWKHPDGSYKLEQEAIDSIKRGGGGGAGCLGISFNVITGEEIPGIREGKRAIYGARRTLN-VTQYREHPGDSYNPV---------TMRDVPATAPPHQTTEMLKRSEDVHLRTRPW 243
BLAST of mRNA_H-paniculata_contig11993.1262.1 vs. uniprot
Match: A0A835YXM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXM3_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 3.090e-19 Identity = 68/208 (32.69%), Postives = 93/208 (44.71%), Query Frame = 1
Query: 1 KNKSD-EVFDGSYRPPPSDPRLTTVNRMELTKSIHSEGYSLRRPKEGFDRLTANRTNYSLGNIKRDFSTATAELQTKHPCEHPAVEQPAVGGSTLSDGSYRVDELARDSLRRGGGGGEGALGVRFDIINGTPDPKARDKVAMRAGPRVTLNKVEKELLHPTDGWGDIPGGMCIDVINGRDRLKHVAPER-SADVPVRFDTAVGRTRPW 618
KN+S E G Y+ P + T + S G+ +RP G+DRLTA+RTNYSLG STA AE Q P V+QP +G + + LG + II G AR++ GPR TLN+ E+ LHPTD WG G +D++ G+ + P + + +R D RTRPW
Sbjct: 62 KNRSHKEAIQGEYQVPAEEFYTTDYKAGYAGGGVPSTGFKRQRPLPGYDRLTASRTNYSLGTQPATSSTAAAE-QFADPRTRTPVQQPCIGPA------------------------DACLGSSYHIITGE-SWDAREQRLRCMGPRHTLNQEERCKLHPTDSWGGDLYGTHVDIVTGKRVANPIRPPAPTVETLLRPDALGLRTRPW 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11993.1262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11993.1262.1 >prot_H-paniculata_contig11993.1262.1 ID=prot_H-paniculata_contig11993.1262.1|Name=mRNA_H-paniculata_contig11993.1262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp KNKSDEVFDGSYRPPPSDPRLTTVNRMELTKSIHSEGYSLRRPKEGFDRLback to top mRNA from alignment at H-paniculata_contig11993:3574..5735+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11993.1262.1 ID=mRNA_H-paniculata_contig11993.1262.1|Name=mRNA_H-paniculata_contig11993.1262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2162bp|location=Sequence derived from alignment at H-paniculata_contig11993:3574..5735+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11993:3574..5735+ >mRNA_H-paniculata_contig11993.1262.1 ID=mRNA_H-paniculata_contig11993.1262.1|Name=mRNA_H-paniculata_contig11993.1262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at H-paniculata_contig11993:3574..5735+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |