|
|
Homology
BLAST of mRNA_H-paniculata_contig119.1212.1 vs. uniprot
Match: A0A6H5L1H1_9PHAE (Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H1_9PHAE) HSP 1 Score: 183 bits (465), Expect = 1.530e-55 Identity = 88/111 (79.28%), Postives = 101/111 (90.99%), Query Frame = 1
Query: 1 MAQRGVIQGQIFLDSFNPILENAIKPRLLEGKREPCELKVSDFDDAMYTLEVPPSSLTSLSLSIAISGWREIYSNGGAEVLASMYPGMASPQPRPGHNLTLTVDLDNLPIP 333
MAQRGVIQGQIFLDSFNPILENAIKPRL+EGKREPCELKVSDFDD MYT+EVPP++L++LSLSIAI+GW +I SNGG+EVLA+ Y GM SPQ RPGHNLT+T +LDN +P
Sbjct: 1 MAQRGVIQGQIFLDSFNPILENAIKPRLMEGKREPCELKVSDFDDVMYTVEVPPNNLSTLSLSIAINGWDQISSNGGSEVLATKYQGMISPQVRPGHNLTITTNLDNPTVP 111
BLAST of mRNA_H-paniculata_contig119.1212.1 vs. uniprot
Match: A0A8J2S8U6_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8U6_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 4.510e-12 Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 37 LDSFNPILENAIKPRLLEGKREPCELKVSDFDDAMYTLEVPPSSLTSLSLSIAISGWREIYSNGGAEVLASMYPGMASPQPRPGHNLTLTVDLDNLPIP 333
L+ + ILE A+ RL++GKREPCE+ +DFDDA++ L V P + L+L + + + +GGA L + + G+ + QP G+++ L+V+ D P
Sbjct: 8 LEPQSAILEEALGARLIDGKREPCEVSCADFDDALFKLVVLPGQESVLTLHAKLPCYDTLLEHGGARCLETTFAGLVT-QPENGYDVALSVNADECAAP 105
BLAST of mRNA_H-paniculata_contig119.1212.1 vs. uniprot
Match: A0A7S3JWD0_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWD0_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.090e-9 Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = 1
Query: 37 LDSFNPILENAIKPRLLEGKREPCELKVSDFDDAMYTLEVPPSSLTSLSLSIAISGWREIYSNGGAEVLASMYPGMASPQ--PRPGHNLTLTV 309
L + N +LE AI RL+EGKRE CEL SDFD+ + + V P + + I + WRE+ G +E L Y + + + P PG + LTV
Sbjct: 4 LKTHNMVLEEAIGSRLVEGKREACELTTSDFDNTRFKVVVNPGEEKIIKVMIDLPCWRELEKLGASEALKEEYGQVCTVESKPEPGFCVMLTV 96
BLAST of mRNA_H-paniculata_contig119.1212.1 vs. uniprot
Match: A0A0L0HT16_SPIPD (Arp2/3 complex 34 kDa subunit n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HT16_SPIPD) HSP 1 Score: 60.5 bits (145), Expect = 1.800e-8 Identity = 39/99 (39.39%), Postives = 53/99 (53.54%), Query Frame = 1
Query: 31 IFLDSFNPILENAIKPRLLEGKREPCELKVSDFDDAMYTLEVPPSSLTSLSLSIAISGWREIYSNGGAEVLASMYPGMASPQPRPGHNLTLTVDLDNLP 327
I L N ILE A++ R G+ E +LKV+DFD Y L P S T L++S+A+ + E+ G VL Y M P G ++T+ VDL NLP
Sbjct: 3 IDLQPSNRILEEALRERF-NGEAEKLQLKVADFDGVKYRLSTPESK-TVLNISMAMRCFGELQRYGADAVLRREYGDMLESTPESGFDVTVRVDLQNLP 99
BLAST of mRNA_H-paniculata_contig119.1212.1 vs. uniprot
Match: A0A8H7RM12_9FUNG (Arp2/3 complex 34 kDa subunit n=2 Tax=Mucoraceae TaxID=34489 RepID=A0A8H7RM12_9FUNG) HSP 1 Score: 60.5 bits (145), Expect = 1.980e-8 Identity = 35/100 (35.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query: 31 IFLDSFNPILENAIKPRLLEGKREPCELKVSDFDDAMYTLEVPPS-SLTSLSLSIAISGWREIYSNGGAEVLASMYPGMASPQPRPGHNLTLTVDLDNLP 327
I LD N I++N + RL K EP ++ V+DFD Y + P S ++ +SL A + E++ +G EVL Y + P G+++TL +DL+ LP
Sbjct: 20 ILLDYHNVIIKNTLDARLKGEKVEPVDMTVADFDGVTYHISTPESYNVIHISLGWACAA--ELFGHGAKEVLQREYGTLLLDSPEQGYDVTLAIDLEQLP 117
BLAST of mRNA_H-paniculata_contig119.1212.1 vs. uniprot
Match: UPI000C785751 (probable actin-related protein 2/3 complex subunit 2 isoform X1 n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C785751) HSP 1 Score: 58.5 bits (140), Expect = 9.080e-8 Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 31 IFLDSFNPILENA----IKPRLLEGKREPCELKVSDFDDAMYTLEVPPSSLTSLSLSIAISGWREIYSNGGAEVLASMYPGMASPQPRPGHNLTLTVDLDNLP 327
I L+S N I+E IK L K+E + V+DFD A+Y + P + T L++SI++ ++E+ +G VL+ Y M QP G ++T+ VDL N+P
Sbjct: 2 ILLESNNRIIEETLSLKIKNVLGNLKQEGISITVADFDGALYRISNPDNDKTKLNVSISLKFYKELEKHGSDMVLSREYGDMLI-QPEEGFDVTIQVDLSNIP 103
BLAST of mRNA_H-paniculata_contig119.1212.1 vs. uniprot
Match: A0A164TGH0_9AGAM (Arp2/3 complex 34 kDa subunit n=2 Tax=Sistotremastrum TaxID=139133 RepID=A0A164TGH0_9AGAM) HSP 1 Score: 55.1 bits (131), Expect = 1.580e-6 Identity = 33/99 (33.33%), Postives = 52/99 (52.53%), Query Frame = 1
Query: 31 IFLDSFNPILENAIKPRLLEGKREPCELKVSDFDDAMYTLEVPPSSLTSLSLSIAISGWREIYSNGGAEVLASMYPGMASPQPRPGHNLTLTVDLDNLP 327
I L+S N I+E+ + + L K +++ D+D + L P T L LS+ I W E+ G EVL Y + S Q P +N+TL +D++N+P
Sbjct: 2 ILLESHNVIIESTLAEKFL--KPSVIDVQFVDYDGVRFHLSTPERK-TQLLLSMHIRCWNELARYGATEVLQREYGQLVSSQVEPEYNVTLEIDVENVP 97
BLAST of mRNA_H-paniculata_contig119.1212.1 vs. uniprot
Match: A0A8H6YEC9_9AGAR (Arp2/3 complex 34 kDa subunit n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6YEC9_9AGAR) HSP 1 Score: 54.3 bits (129), Expect = 2.920e-6 Identity = 30/99 (30.30%), Postives = 51/99 (51.52%), Query Frame = 1
Query: 31 IFLDSFNPILENAIKPRLLEGKREPCELKVSDFDDAMYTLEVPPSSLTSLSLSIAISGWREIYSNGGAEVLASMYPGMASPQPRPGHNLTLTVDLDNLP 327
I L+ N I++ + +++ K +++ D+D + L P T L LS+ I W E+ G +VL Y + PQP P +N++L +DL+ LP
Sbjct: 2 ILLEPHNVIIQTTLSEKII--KPSSVDVQFVDYDGVRFHLSTPERK-TLLLLSMHIRCWDELVQYGALDVLQREYGALLQPQPEPEYNVSLAIDLEQLP 97
BLAST of mRNA_H-paniculata_contig119.1212.1 vs. uniprot
Match: A0A4Y9XPD6_9APHY (Arp2/3 complex 34 kDa subunit n=3 Tax=Fomitopsidaceae TaxID=1769247 RepID=A0A4Y9XPD6_9APHY) HSP 1 Score: 53.1 bits (126), Expect = 7.520e-6 Identity = 31/92 (33.70%), Postives = 50/92 (54.35%), Query Frame = 1
Query: 55 ILENAIKPRLLEGKREPCELKVSDFDDAMYTLEVPPS-SLTSLSLSIAISGWREIYSNGGAEVLASMYPGMASPQPRPGHNLTLTVDLDNLP 327
+ E AIKP ++ ++ DFD + L P S+T++ LS+ I W E+ G +VL Y G+ + QP P +N++L +DL+ LP
Sbjct: 15 LAEKAIKPGYVD-------VQFVDFDSVRFKLSTPDKKSVTNVLLSMNIRCWDELVKYGVHDVLKREYGGLVAAQPEPDYNVSLEIDLEQLP 99
BLAST of mRNA_H-paniculata_contig119.1212.1 vs. uniprot
Match: A0A401H1Z8_9APHY (Arp2/3 complex 34 kDa subunit n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H1Z8_9APHY) HSP 1 Score: 52.8 bits (125), Expect = 1.030e-5 Identity = 31/99 (31.31%), Postives = 51/99 (51.52%), Query Frame = 1
Query: 31 IFLDSFNPILENAIKPRLLEGKREPCELKVSDFDDAMYTLEVPPSSLTSLSLSIAISGWREIYSNGGAEVLASMYPGMASPQPRPGHNLTLTVDLDNLP 327
I L+S N I++ + + + K +++ DFD + L P T L LS+ I W E+ G +VL+ Y M P P P +N++L +DL+ +P
Sbjct: 2 ILLESNNYIIQTTLAEKFI--KPSSLDVQFVDFDGVRFHLSTPERK-TGLVLSMNIRCWDELVKYGVRDVLSREYGRMVKPAPEPEYNVSLEIDLEQIP 97
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 67.0 |
| Seed ortholog evalue | 6.3e-09 |
| Seed eggNOG ortholog | 44056.XP_009038166.1 |
| Preferred name | ARPC2 |
| KEGG ko | ko:K05758 |
| KEGG Pathway | ko04144,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,map04144,map04666,map04810,map05100,map05130,map05131,map05132 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000001,GO:0000147,GO:0000226,GO:0000302,GO:0000902,GO:0000904,GO:0001667,GO:0001726,GO:0002009,GO:0002102,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003674,GO:0003779,GO:0005102,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005829,GO:0005856,GO:0005884,GO:0005885,GO:0005886,GO:0005912,GO:0005924,GO:0005925,GO:0005938,GO:0006810,GO:0006887,GO:0006897,GO:0006898,GO:0006909,GO:0006928,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007017,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0008064,GO:0008092,GO:0008150,GO:0008154,GO:0008360,GO:0009636,GO:0009653,GO:0009719,GO:0009790,GO:0009888,GO:0009986,GO:0009987,GO:0010026,GO:0010033,GO:0010035,GO:0010090,GO:0010243,GO:0010591,GO:0010592,GO:0010631,GO:0010638,GO:0010720,GO:0010769,GO:0010770,GO:0010810,GO:0010811,GO:0012505,GO:0012506,GO:0014070,GO:0014910,GO:0014911,GO:0015629,GO:0016020,GO:0016043,GO:0016192,GO:0016331,GO:0016477,GO:0019894,GO:0019899,GO:0022411,GO:0022603,GO:0022604,GO:0022607,GO:0023052,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030041,GO:0030042,GO:0030054,GO:0030055,GO:0030139,GO:0030141,GO:0030154,GO:0030155,GO:0030175,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030479,GO:0030659,GO:0030666,GO:0030670,GO:0030832,GO:0030833,GO:0030834,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031143,GO:0031252,GO:0031253,GO:0031256,GO:0031334,GO:0031344,GO:0031346,GO:0031410,GO:0031941,GO:0031982,GO:0032271,GO:0032273,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032535,GO:0032587,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032984,GO:0032989,GO:0032991,GO:0033043,GO:0033157,GO:0033267,GO:0033554,GO:0034021,GO:0034314,GO:0034599,GO:0034614,GO:0034622,GO:0035254,GO:0035556,GO:0035650,GO:0035690,GO:0036119,GO:0036120,GO:0036194,GO:0036195,GO:0036477,GO:0038093,GO:0038094,GO:0038096,GO:0040011,GO:0040012,GO:0040017,GO:0042221,GO:0042493,GO:0042542,GO:0042995,GO:0043005,GO:0043025,GO:0043197,GO:0043198,GO:0043204,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043254,GO:0043624,GO:0043679,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044297,GO:0044306,GO:0044309,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045010,GO:0045202,GO:0045335,GO:0045472,GO:0045595,GO:0045597,GO:0045785,GO:0046677,GO:0046903,GO:0048013,GO:0048308,GO:0048311,GO:0048468,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048598,GO:0048729,GO:0048856,GO:0048869,GO:0048870,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051015,GO:0051049,GO:0051050,GO:0051094,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051258,GO:0051261,GO:0051270,GO:0051272,GO:0051489,GO:0051491,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051646,GO:0051674,GO:0051716,GO:0060284,GO:0060341,GO:0060429,GO:0060491,GO:0061024,GO:0061645,GO:0061825,GO:0061826,GO:0061827,GO:0061830,GO:0061834,GO:0061835,GO:0065003,GO:0065007,GO:0065008,GO:0070161,GO:0070201,GO:0070301,GO:0070358,GO:0070528,GO:0070848,GO:0070849,GO:0070887,GO:0071236,GO:0071310,GO:0071362,GO:0071363,GO:0071364,GO:0071407,GO:0071417,GO:0071437,GO:0071495,GO:0071801,GO:0071803,GO:0071840,GO:0071933,GO:0071944,GO:0072752,GO:0090066,GO:0090087,GO:0090130,GO:0090132,GO:0090313,GO:0090314,GO:0090316,GO:0090558,GO:0090626,GO:0090723,GO:0090725,GO:0097223,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:0097435,GO:0097440,GO:0097447,GO:0097458,GO:0097708,GO:0098588,GO:0098590,GO:0098657,GO:0098793,GO:0098794,GO:0098805,GO:0098858,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0099568,GO:0110053,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120038,GO:0150034,GO:1900024,GO:1900026,GO:1901355,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901879,GO:1902115,GO:1902117,GO:1902743,GO:1902745,GO:1902903,GO:1902905,GO:1903533,GO:1903827,GO:1903829,GO:1904951,GO:1905475,GO:1905477,GO:1905924,GO:1905926,GO:1990089,GO:1990090,GO:2000145,GO:2000147,GO:2000249,GO:2000251,GO:2000812,GO:2000814 |
| EggNOG free text desc. | Arp2/3 complex-mediated actin nucleation |
| EggNOG OGs | COG4690@1,KOG2826@2759 |
| Ec32 ortholog description | Actin-related protein 2/3 complex subunit 2 |
| Ec32 ortholog | Ec-09_003720.1 |
| COG Functional cat. | E |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko04131,ko04812 |
| Exons | 4 |
| Model size | 333 |
| Cds size | 333 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig119.1212.1 >prot_H-paniculata_contig119.1212.1 ID=prot_H-paniculata_contig119.1212.1|Name=mRNA_H-paniculata_contig119.1212.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
MAQRGVIQGQIFLDSFNPILENAIKPRLLEGKREPCELKVSDFDDAMYTL
EVPPSSLTSLSLSIAISGWREIYSNGGAEVLASMYPGMASPQPRPGHNLT
LTVDLDNLPIP back to topmRNA from alignment at H-paniculata_contig119:179..5618- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig119.1212.1 ID=mRNA_H-paniculata_contig119.1212.1|Name=mRNA_H-paniculata_contig119.1212.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5440bp|location=Sequence derived from alignment at H-paniculata_contig119:179..5618- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCACAGCGCGGAGTTATCCAGGTACTCAAAGATGCCAACTTGAAGAA
TTTTTTGTTTAGAAATAAGATGTTTGCATCTTGCTGTGCCACAATGGCGC
ACTGTTTGTAGAGCGGGGAAAATGTGGGGGAGAACAAAGGAAGGGGCGGA
CTGATGTGGGGCACACAGGACAGTACACTTTAGACAGCACGTATAGACAG
GGTGGGTATGAACCTTCGACCTTGACGAAGGCTGGGTGCAGAATAGACTT
AATCTCGCTCATATTGTTTGTTGTAAGTGTCTAGCTGTTTGGTTGAACTC
AGCAATGCCTATGGATTAACCCAGGTTTTTCGCTTTTCTGTGCTGCGCAG
ACATTCAAGCGATTTTTCGCTGTTCTGTCAAGACTCTCATGTTGACAGTA
CATAAGACACATCTAGAGGAGTACTGTATTTGAGATTTTTGTGCGGTATT
GCCGCGTCTATGGGGTAGCAAAGTCCAGGTCTACATGACTAGATGCCCTG
TAGTGTTCACAGTACTGCTGTCTGTGGTACGTTGGTACTGGAAACGATTA
GATACGAGCATGCAGGGCATTTGCCCACACCAATTTCATGAGCATCGAAT
GGCTCGACCAATGGGCGTCGTTTGAAGAGGGAAAAGAACCTATTTTCGGA
ACAAAAATGAAACATGCCAATATTGTAATATTCTAGGTCTGCAGCCCTTG
TACCCAGAACGGTGCCAACTGTTTGTCTGTTTTGAGATAGCTGTCTGAAG
AACGGCGGCCACCTATCCCCGTACGTACTTTTTTCTTTTTTTCTAGAGGA
GAATTAGGTAGGAACAGGCGCCCCTGAGGGTGAATCAAACTGATTGTTAC
AGGCGTGCTGGAATCGACGTAATCCAGAATTACCTTAGCCGCGTGACGCC
CACCTGGGGGCAAGGTGCAGTTAGTATTTATCATTTGAAAGAATTAGCAT
GCTCCGTTGCGCAATCATCGATTTCCCCACACACATATGTAGGATGTACA
CTACAGTTGACGTTATCCCCGGAAATGTGGCGACGACCCCCCCCCCTAGT
TTTCCGTACCTGCGCCATTGTGGTAATTTTACCACGCCAACTCAAGAATG
GAATATGGAGAATTTCCGACAGCAGATTGTCCGCCCAGTATAGGATGCAC
AACAGTCCCATGTGAGGTGAAGTGACTGTTATTTTCGTTTTAGAACAGAG
CAACCTGCACGAGATCTCACCTCGATCGTCACAGGCGCTTGAGTCGTAAG
TGCGGATCCGTATAGTCCAGACCCCCCTCGGCAGAATCTAACTTTGGCGG
GTGCACGCATTGCCGTTGATGGTGGCGACAAGGGTGGAAAGCCTTCGGGG
CTTTGTGGGAGGGAAGCACGTTGTGGGCTATGGCGGTGGTTCGGGGGCCG
CCGACGCCGTCATGGTAGTCACCGTCAGCGTTACAAGAGCCGTCCGCAGC
TTCGCCACTCGACTGGTCAAGGCGGGCGTAGGTGACCCTGTGGAAGGCTC
ACCTGCGGCTGTGTTCGCCTTAGACGAAGTCGTTGCGGCGAATTGTTCAT
GCCGTAACACCACAGGAAGCATTGACTGCTGTGGACTGATGAAGCTGCGG
ATGGCTCTTGCGACGCCGATGATGACTACCGTGACGGCGTCGGCGGCCCC
CGAACCACCGCCGTAGCCCACAACGTGCTTGCCTCCTCCAAAGTCCCGAA
GGCTTTCCGCCCTTGTCGCCACCGTCAACGGTATGCGTGCACCTACCAAA
GCCAGCTCCTGTAGGGATGAGGAAAATCTGGGCTGTACGGATCCACGCTT
ACGACTCAAGCGCCCGTGACGATTAAGGTTAGTGCTCGTATCTTGTATAC
GAGTATACATGTAGTGGTAAATATATTACGACAACACGGCTCAGTTATAG
CATCAACGTTTGTACGTCGCTGCGGTCAGAGATGACATGCATGACCCAGC
AGCGTGTCGACATTTACAATGTACACCTCATAGATAGATACTGCTGGGAG
CATGACACTTGCCGCTAACCCTCGCGACGGGGGAAACAGTGTACGTTGGA
GAGACAAGATTGGGGAGTGCTACTCGGGGCGTGCATTGGCAAGTTCTACA
GCCAGTATTATGCGTTGGAAAGCTACCAACCTCGCGACAGGGACACAGTG
TGCATTGGCGGGTCGCGCATGTCGACCTCGCGAGGTGGAGCAATTGGCGT
TGGTAATTCGTAGTTTCATTTGAAATGCGATGGTCTAAAAAGGTGTGTTT
GAGACGGGAACAAAATGAGTTGCCCCGAGGCCCATTTTGCTGCGGATTTT
GCGCTCTGACCAATGTTCGTTGGGAGAAGACGAATCTCCTAGAAAAACAG
AGGTCATGACCCCAAATGGCCCGCACTGGTGATAGACAGCTTACCGTCAG
CACCACTGGAGCACGCTTAGTGATACGGTGCATATTAGTATATTGCTCCT
CCGACTTCCCCACGCTCGCGACAGGGGTGCAGTGTTCGCTCTCAACCCAA
AACTCAATACAACCCTACCCTACCCTACCCTACCCAACACTACAAAATCA
CTATATTAATAGGAAGGGTTCTGTGTGGGTTGCAAGGCCACTCGCCCGAC
TGCCGCCGACCTCGTAACTCCTGGTGTAGGACCACTTTTGCGACGACCAG
CTCCTGTTTTGCTTTTTCTATCGAGGAACGTTCAGTGAGTCACCCCAAGG
GTTGTGCGCATCGGGTAAACCCAGAAGAGGTGCTGTGAAACTTGGAGAGC
CTATTCGCCAGCCCCTCTTGGTGCGCGGGTGCCGTTGTACCTTCTCTTGG
CTAAGCGCACGGGGGGGGAGGGGGGGGGCTGTCTGTTTTCCTACAAATTG
CCAGGATTTGGGATGATTTTCGTAAGAATGCCGACTGTATTTGAGAAATA
AACGCTGTACACACTTGAAAACATGGTTTTGCCTCGCAGGTAAGTGCACG
CACAAGAGGATTTTATATTCACTAGAGGCGACCTCAGTCGTACGTTGTCC
ATGGCCATCACGCTTGATGCGAGCTAAATGAGTTGTCGTTAATTGCTAAG
AGGATCGAGTAATCAATCAATTTTGGAGCATGTCATTCTTGTGTGTTTGG
CTACATAAACCCCTAACGTGTTCACTGCGTCAACTCTCAGCCGTATTTTT
GTTTTAGCTTCCAGAAGTTTATGTGGCTGATGCCGTTTGCTTACCTTAAT
AAGTAATCGTTTTTCAGCCCCAAAGAGGGAAGGTAGGGAGGTAGCGTGGG
AGGTACCTTTTTGCAAGAAGTGGGTACCCTCGATCGGAGGACACCAAGAG
TCTTGTGTAACTGTAACCATATTATTCAGTAGGGTAAGGTGGTGGTCATT
GTTGTCTCAAAACAGTTGTTCATTTATGTACTCTTGAAACTCCTGACAAA
GGAATCTTCATGCGAGCGCGGCGAATCCGCGGGTTCAGGACAAGCGCAGA
GTGCATGAGCGTAGCCTTGGCTCTGCCACCCGCGGATTCCTACGTGAGAA
TTGAGATTTGGCCGCCGCCTTCATCACCCCGCTCACTTATCTTTTCAGTT
GGTTTAACCGTTTCCGTTTTCGCTGGATACATCGCGGTGTCCCAAAACAG
GGCCAAATCTTCCTGGACAGCTTCAATCCCATCTTGGAAAATGCTATCAA
GCCTCGCCTGTTGGAGGGCAAGCGAGAACCATGCGAACTCAAGGTCTCGG
ATTTCGATGACGCCATGTACACGCTCGAGGTACAGTAAGTACGATAGCGC
ATGAGAAATGCCTGTTCGGCATGAGACTCACGGCTGTTACACATCCTCAC
TGGTAATACAGATGGAATAGGACCACAAGGTAGGCAGCGCTTCATGGGCA
TATTCCTCATTGATCATCACTACCAGGCACATTTTAGGCAGGAAAATGAT
GGAATCTGGAAATCTGGAAGATGTAGCCGGAGGGGAAAACAGCCCAAATT
CCCGTACTTTCAAAACGTACATGAGATCGATTCTGTTGGTACGGGCCAGG
TTTTCCGTTCGACTCCATTTTGAATGTTGGATTATGGAGGTTTGCGCCAC
TACTTTTGCGTGCCACCCCAAATTCCCATATTTGCACATCTTCTCCCAAA
GTGTGCTCGATAGTGATGACCCTCAGAGTAAAAAGAGGATCCTGAATTTA
TTGATGTCTAGTTTTTCTCAAGTTTGGGTGGTGTCCGGCATGTACTTACA
GACGTGTGTTGTAATGTGCAACTACACGTGGGGAGCATGATCCGTGGCCT
CTTGATATGTGACAGGTCCTCGACTATTCAATTGAACGCGATACGGATGA
TGGACACTCGAAGCAATTCTCGCGTAATCCCCCCCGCTCCCAATTCTTGT
ACGAGTTTTGACGATGGTGACCGGTTCAACATATTTCATCCCTAGTAGTG
CTTTTTATGCCGTAGTTTTGGCCTAACTGCTGGTAGTTTTAGATGTAGTG
GACTTTATGGTCTCCCCTTCATATCATCTTGTCTTGTGGGCTTTATCTCT
CCTCCGTCGTCTGTCTACTCTTGCTGATGAGTATGTCTAGCCACAATTTT
TTGTAGGCCACATGACCACGGCATGATGTACAGTAATGGGCCCGATTTTA
GGCCTCTAATGCCCCGTGAAAAAATATATATGTTCGGCCTAAAATCGGGG
TCCACTGTTCGATCATATTTTTATATCCTTGTTGTTGTCCCTGCCAGGTA
CCCCCGAGTAGCTTGACGAGCTTGTCCCTATCCATTGCTATCAGCGGCTG
GAGGGAGATATACAGGTAATAGCATTGCTGGCGTTCGTGTATACATGCGT
GTGCTTGCGTGTGTGCCAACATTTTTTTCTATATAGACCATATACATGTG
ATCTCGTAACGGCTTAATTATTTTTTTCTTTCTCTCTTGAATATGTATTG
TTTCTTTTTGCTGTGCCGTTTTCCCGCCACAAGAGGCATCTGCTTGTGTG
TGTGTGTTTTTTAATTTAGAGTCTTGCTTGCAGCCCAAAACCGACGGCAC
GTATTTATTGCCATATGGGCTGTACACAGCTACTAGCTAGCTCTGCACAG
TTGATTCCGTGCGAGTTGCGACGCTGCGCATTTTTTTCCCTCGGATGTAT
TTGTTTTTTTTTGTTTTTTTTCTTTGTAATTCGAAGCAATATTCATGGAC
TAAGTGTTTTAATTGTTCCTTTTTTCTGTCTTGTTTTTCTTCATTCGAAC
CAATTATTGATGTTAAAAAAAGAAGAACTTGTTTTCCTCCTGGAAAGTTT
TTTTCGGTAGGCCTACCGTGTTGTAATACAATACTATCGGCTTTTTTTTT
TTTTTTTTGCGTCTCTCTCGTGCTTTAGTAATGGAGGAGCTGAGGTGCTG
GCCTCCATGTACCCGGGTATGGCATCACCTCAGCCTCGGCCAGGACACAA
CCTTACTCTTACGGTGGACCTGGACAATCTACCAATCCCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig119:179..5618- >mRNA_H-paniculata_contig119.1212.1 ID=mRNA_H-paniculata_contig119.1212.1|Name=mRNA_H-paniculata_contig119.1212.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at H-paniculata_contig119:179..5618- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCACAGCGCGGAGTTATCCAGATGGCACAGCGCGGAGTTATCCAGGG
CCAAATCTTCCTGGACAGCTTCAATCCCATCTTGGAAAATGCTATCAAGC
CTCGCCTGTTGGAGGGCAAGCGAGAACCATGCGAACTCAAGGTCTCGGAT
TTCGATGACGCCATGTACACGCTCGAGGGCCAAATCTTCCTGGACAGCTT
CAATCCCATCTTGGAAAATGCTATCAAGCCTCGCCTGTTGGAGGGCAAGC
GAGAACCATGCGAACTCAAGGTCTCGGATTTCGATGACGCCATGTACACG
CTCGAGGTACCCCCGAGTAGCTTGACGAGCTTGTCCCTATCCATTGCTAT
CAGCGGCTGGAGGGAGATATACAGGTACCCCCGAGTAGCTTGACGAGCTT
GTCCCTATCCATTGCTATCAGCGGCTGGAGGGAGATATACAGTAATGGAG
GAGCTGAGGTGCTGGCCTCCATGTACCCGGGTATGGCATCACCTCAGCCT
CGGCCAGGACACAACCTTACTCTTACGGTGGACCTGGACAATCTACCAAT
CCCATAATGGAGGAGCTGAGGTGCTGGCCTCCATGTACCCGGGTATGGCA
TCACCTCAGCCTCGGCCAGGACACAACCTTACTCTTACGGTGGACCTGGA
CAATCTACCAATCCCA back to top
|