mRNA_H-paniculata_contig11899.1211.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11899.1211.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 374 bits (961), Expect = 1.890e-113 Identity = 236/613 (38.50%), Postives = 338/613 (55.14%), Query Frame = 1 Query: 1 LEDCVQALRGLAARVSVRGTFAGVAKYRPDKTVIEGLRDRIEGLVPAMELTGVVRISEQLETIQALLARI---SLSPPKLTALSMDAPRPKD--WHVVRHTVVDNVYDHLAADEASWMVGLVGPGGSGKSTAAAMIVGNGLDVLRSHDGETHEKIIEGSRRVRALFPDGVVWLRVGRDG--ADRLPALMQELAKRVYEFVLDSKGCGPGESPIDPQNNGAAYTRETASG-GMAGKGLRYLVVADDVRDKEVIKGLRKTGMRVLLTTRDPTLVEGADGRVIPVNRLTKEEADAVLIGAAEVPEDARLPHAAHFVVDRCGHVPIYVESVARWAMLRERGDETSWNRAANVIEHHFREIKAEDTVVSNRNQENDACADTRIAILRAGFECLEAENSQSRWLYLALAVMPDDHAFEVYEAAVLLFG----HEHTDCDLEQAVQAVAVLERWAIVTEAGPGLYRMHNIRSAFARRAIVGQRNVLAMTVQRWRDHLSTLEVVQSVDLYALLELWQGIERIGGDGWRVSRPYNLAVSKLEISDSLFFPSVTVVANLYAAEGYYQGNRTWFRRSLVLQEEAGLGPEHLLVVSTLYGLIDCARKMGRLEEAESFSRR-ALMV 1800 LE CV A AR S RG K D + L R++ L + L G+ + +++ ++A+LA + + P + ++ +P + WHV R VVD VY+HL+ + +VGLVG GSGK+T AA IVG R H ET ++++ RVR F DGVVWLRVGR G A+R+PALM +LAK V+E + S G PG SP G+A+ + G G A R LVVADDV + ++++ LR TGM VL T+RDP LVE +G V+PV++L+K EA+ +L GAAE+ + LP AA V++RC + +E V RW+ ++ DE W A + I+ + E + + + D R+AILRAGF L A+N + LYL+LAVMPD AF EAAV LF + QA + VA LE+WA+VT G L+RMH+ S FAR + +V A ++RWR S L+ ++S+D + +++LW E IGG+ WRVSRPY++A+ L S PS+ V E ++ R L +Q++A + EH V TL LI CA + +A++ R +LMV Sbjct: 138 LESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTG--RRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPT---GGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGE---ANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHG-NLFRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPECIPSLKAVVEFGINECAWEVTHDVALRLLRVQKDAAV--EHAEVRHTLESLIHCANALNLNSDADAHRRELSLMV 739
BLAST of mRNA_H-paniculata_contig11899.1211.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 338 bits (867), Expect = 9.790e-99 Identity = 223/630 (35.40%), Postives = 330/630 (52.38%), Query Frame = 1 Query: 1 LEDCVQALRGLAARVSVRGTFAGVAKYRPDKTVIEGLRDRIEGLVPAMELTGVVRIS------------------------------EQLETIQALLARISLSPPKLTALSMDAPRPKDWHVVRHTVVDNVYDHLAADEASWMVGLVGPGGSGKSTAAAMIVGNGLDVLRSHDGETHEKIIEGSRRVRALFPDGVVWLRVGRDGADRLPALMQELAKRVYEFVLDSKGCGPGESPIDPQNNGAAYTRETASGGMAGKGLRYLVVADDVRDKEVIKGLRKTGMRVLLTTRDPTLVEGADGRVIPVNRLTKEEADAVLIGAAEVPEDARLPHAAHFVVDRCGHVPIYVESVARWAMLRERGDETSWNRAANVIEHHFREIKAEDTVVSNRNQENDACADTRIAILRAGFECLE--AENSQSRWLYLALAVMPDDHAFEVYEAAVLLFGHEHTDCDLEQAVQAVAVLERWAIVTEAGPGLYRMHNIRSAFARRAIVGQRNVLAMTVQRWRDHLSTLEVVQSVDLYALLELWQGIERIGGDGWRVSRPYNLAVSKLEISDS-LFFPSVTVVANLYAAEGYYQG-NRTWFRRSLVLQEEAGLGPEHLLVVSTLYGLIDCARKMGRLEEAESFSRR 1788 LEDCV A+ R RG + V K DK I L++R+ L + L G+ ++ E L + +L ++ P K+ + P K WHV R V + V+ L AD +VGLVG G+GK+TAA+ IV S VR F DG+VWL V D LP LM +LA+ V+E + S G P S ++G AY ++ G GKGL+ LVVAD+V + +V+ L +TGM +LL+TRD LV+ A+G V+ V+ L++ EA++VL AAE+ +ARLP A +++ CG V + + V RW+ +R R D T+W+ AA + R + V + N D+ + R AIL+AGFE L +++ + + LYL+LAV+PD HAF V +AAVLL+ E D V LERW I+ YRMH+ S FAR +++ + +V ++R +S+LE ++S++ Y L LW G++R+GGDGW +RPY A+ L+ S+S LF ++ VA A+ + G NRTW R L+ EE LG +H V++T + L CA +EEA+ + R+ Sbjct: 94 LEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIV--------------------SSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGS-----DDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKV----RAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSV-EATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTW--RRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRK 691
BLAST of mRNA_H-paniculata_contig11899.1211.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 328 bits (842), Expect = 1.390e-96 Identity = 225/627 (35.89%), Postives = 320/627 (51.04%), Query Frame = 1 Query: 1 LEDCVQALRGLAARVSVRGTFAGVAKYRPDKTVIEGLRDRIEGLVPAMELTGVVRISEQLETIQALL----------------------ARISLSPPKLTALSMDAPRPKDWHVVRHTVVDNVYDHLAADEASWMVGLVGPGGSGKSTAAAMIVGNGLDVLRSHDGETHEKIIEGSRRVRALFPDGVVWLRVGRDGADRLPALMQELAKRVYEFVLDSKGCGPGESPIDPQNNGAAYTRETASGGMAGKGLRYLVVADDVRDKEVIKGLRKTGMRVLLTTRDPTLVEGADGRVIP-VNRLTKEEADAVLIGAAEVPEDARLPHAAHFVVDRCGHVPIYVESVARWAMLRERGDETSWNRAANVIEHHFREIKAEDTVVSNRNQENDACADTRIAILRAGFECLEAENSQSRW--LYLALAVMPDDHAFEVYEAAVLLFGHEHTDCDLEQAVQAVAVLERWAIVTEAGPGLYRMHNIRSAFARRAIVGQRNVLAMTVQRWRDHLSTLEVVQSVD-LYALLELWQGIERIGGDGWRVSRPYNLAVSKLEISDSLFFPSVTVVANLYAAEGYYQGNRTWFRRSLVLQEEAGLGPEHLLVVSTLYGLIDCARKMGRLEEAESFSRRALMVL 1803 L +CV A+ R S RG + V K DK I GL+ R+E L + L G+ + ++E ++ALL AR+ +SP L + P K WHV R V+ V D L + +VGLVG GSGK+TAAA IV S VR F DG+VWL V +RL ALM LA+ V+E + S G P + +D +GAAYTR+ G GKGL+ LVVAD+V ++ VI L +TGM VLL+TRD LV A+G V+ V+ L++E+A +VL A+E+ + RLP A +V+ CG V + V V RW+ +R R D T+W+ AA+ + + D V R A R A+L+AGFE L + R LYL+LAV+PD HAF +A LL+ D + + LERW+ + G G YRMH+ S FAR ++ + V V+RW LS+L+V++S D + L LW + R+GG+ WR RPY A+S+++ S+ L S+ + A+G +Q RR L ++ LG +H + TL L+ CA ++G EE + VL Sbjct: 80 LMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIV--------------------RSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRP--AGLD---DGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRVSDNVWDIR-------AVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEG-GAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQ-LGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVL 672
BLAST of mRNA_H-paniculata_contig11899.1211.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 330 bits (847), Expect = 3.470e-96 Identity = 217/605 (35.87%), Postives = 327/605 (54.05%), Query Frame = 1 Query: 1 LEDCVQALRGLAARVSVRGTFAGVAKYRPDKTVIEGLRDRIEGLVPAMELTGVVRISEQLETIQALLARISL-------SPPKLTALSMDAPRPKDWHVVRHTVVDNVYDHLAADEASWMVGLVGPGGSGKSTAAAMIVGNGLDVLRSHDGETHEKIIEGSRRVRALFPDGVVWLRVGRDGADRLPALMQELAKRVYEFVLDSKGCGPGESPIDPQNNGAAYTRETASGGMAGKGLRYLVVADDVRDKEVIKGLRKTGMRVLLTTRDPTLVEGADGRVIPVNRLTKEEADAVLIGAAEVPEDARLPHAAHFVVDRCGHVPIYVESVARWAMLRERGDETSWNRAANVIEHHFREIKAEDTVVSNRNQENDACADTRIAILRAGFECLE--AENSQSRWLYLALAVMPDDHAFEVYEAAVLLFGHEHTDCDLEQAVQAVAVLERWAIVTEAGPGLYRMHNIRSAFARRAIVGQRNVLAMTVQRWRDHLSTLEVVQSVDLYALLELWQGIERIGGDGWRVSRPYNLAVSKLEISDSLFFPSVTVVANLYAAEGYYQGNRTWFRRSLVLQEEAGLGPEHLLVVSTLYGLIDCARKMGRLEEAESFSRR 1788 L+DCV+A + A R S RG + V K DK+ I GL ++ L + L G+ + +++ ++ L RI S KL A+ M AP K WHV R + V D L + + +V L G GSGK+T AA IV S VR F DG+VWL V RLP+LM +LA+ V+E + S G P S + A Y ++ G G+ L+ LVVAD+V +++V+ L +TGM VLL+TRD +V+ + G+ + V+ L++ +A++VL AAE+P ++RLP A ++ CG V + V V RW+ +R R D SW+ AA+ I ++ + N + EN A R AIL+ GFE L +++ + + LYL+LAVMPD HAF + +AAVLL+ + D A V VLERW+I+ A G YRMH+ + FAR ++ + +V ++RW +LS+L++++S D Y L LW IER+GGDGW +RPY A+ + SD+L + V A+ +G +RR L + E+ LG +H V++T L A ++G +EEA + + Sbjct: 94 LKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIV--------------------RSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSAS-----EDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDP---DNDSAENIP-AKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSA-QGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEV-EKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEK 667
BLAST of mRNA_H-paniculata_contig11899.1211.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 311 bits (796), Expect = 7.010e-89 Identity = 219/624 (35.10%), Postives = 328/624 (52.56%), Query Frame = 1 Query: 1 LEDCVQALRGLAARVSVRGTFAGVAKYRPDKTVIEGLRDRIEGLVPAMELTGVVRIS----------EQLETIQA------------LLARISLSPPKLTALSMDAPRPKDWHVVRHTVVDNVYDHLAADEASWMVGLVGPGGSGKSTAAAMIVGNGLDVLRSHDGETHEKIIEGSRRVRALFPDGVVWLRVGRDGADRLPALMQELAKRVYEFVLDSKGCGPGESPIDPQNNGAAYTRETASGGMAGKGLRYLVVADDVRDKEVIKGLRKTGMRVLLTTRDPTLVEGADGRVIPVNRLTKEEADAVLIGAAEVPEDARLPHAAHFVVDRCGHVPIYVESVARWAMLRERGDETSWNRAANVIEHHFREIKAE---DTVVSNRNQENDACADTRIAILRAGFECLEAENSQSRW--LYLALAVMPDDHAFEVYEAAVLLFGHEHTDCDLEQAVQAVAVLERWAIVTEAGPGLYRM---------HNIRSAFARRAIVGQRNVLAMTVQRWRDHLSTLEVVQSVDLYALLELWQGIERIGGDGWRVSRPYNLAVSKLEISDSLFFPSVTVVANLYAAEGYYQGNRTWFRRSLVLQEEAGLGPEHLLVVSTLYGLIDCARKMGRLE 1764 +E+C++A L R RG V DK I ++ I L + L GV + E++ T QA ++ R+S +P KL + P K WHV R V++ V++ L A +VGLVG GSGK+TAA+ +++RS++ VR F DGVVWL V DRLP+LM +LA + E V G P S ++GAAY +E G GKGL+ LVVAD+V +KEV+ L +TGM VLL+TRD LV G++G V+ V+ +++ EA++VL A+E+P + RLP A +++ CG V + + V RW+ +R R D T+W+ AA + +I+ E TVV R+ R A+L+AGFE L + + R LYL+LAV+PD F V +AAVLL+ + + D A V +LERW+++ G YRM H+ S FAR ++ + +V + RW ++S+L+ ++SV + + +LW G+E++GGDGW+ +RPY A++ +E SD L SV VA E ++ RR L + +GP L V+ +L+ L + GRLE Sbjct: 102 VEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAAS-------EIVRSNE-------------VRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEV---GGRRPATS-----DDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDAR-------RKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIR-GCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVTK-VGPYSLSVIRSLHELGLGYKHAGRLE 688
BLAST of mRNA_H-paniculata_contig11899.1211.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 309 bits (791), Expect = 3.100e-86 Identity = 224/608 (36.84%), Postives = 324/608 (53.29%), Query Frame = 1 Query: 1 LEDCVQALRGLAARVSVRGTFAGVAKYRPDKTVIEGLRDRIEGLVPAMELTGVVRISEQLETIQALLARISLSPPKLTALSMDAPRPKDWHVVRHTVVDNVYDHLAADEASWMVGLVGPGGSGKSTAAAMIVGNGLDVLRSHDGETHEKIIEGSRRVRALFPDGVVWLRVGRDG--ADRLPALMQELAKRVYEFVLDSKGCGPGESPIDPQNNGAAYTRETASGGMAGKGLRYLVVADDVRDKEVIKGLRKTGMRVLLTTRDPTLVEGADGRVIPVNRLTKEEADAVLIGAAEVPEDARLPHAAHFVVDRCGHVPIYVESVARWAMLRERG----DETSWNRAANVIEHHFREIKAEDTVVSNRNQENDACADTRIAILRAGFECLEAENSQSRWLYLALAVMPDDHAFEVYEAAVLLFGHEHTDCDLEQAVQAVAVLERWAIVTEAGPGLYRMHNIRSAFARRAIVGQRNVLAMTVQRWRDHLSTLEVVQSVDLYALLELWQGIERIGGDGWRVSRPYNLAVSKLEISDSLFF----PSVTVVANLYAAEG-------YYQGNRTWFRRSLVLQEEAGLGPEHLLVVSTLYGLIDCARKMGRLEEAE 1773 L++CV L+ +A R RG A +A++R D I+ LR RIE +VP M L+GVV E+L+ I LAR+ P KL + AP K +HVVR VVD V L D M L G G+GK+T+AA +VG E RVRALFPDGVVWL VGR+ ADRLP+LM LAKR++E V+ G ++P ++G +Y R+ S + LR LVVADDV + V++ LR+TGM VLLTTR P + E + RV+ ++ L EA+ VL GAAE+P RL A+ V++ CG V + V W +R +W R + ++ + V N ++ND A R+A+LRAGF+ + E+ ++ LY+ LAV P+ F +AAVLL E A +++LERW ++ YR H+ + FAR+ ++ + ++ V+RW +H+S L+ V+++ LL +W+ +E +GG GW RPY+ + ++ S+ +V VV NLY + FRR+L + EEA LGP+ + V TL L C R+ GR EAE Sbjct: 95 LQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQI---LARLQPGP-KLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVG------------------ERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMK----GAVDAPTG--DDGVSYVRKIVSQ----EKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPEE-RVV-MDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQ-MKVGNTGEDNDR-AINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLLENEE-------VAKGPISILERWGVLRTDASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNPATSYATSGAVGVVMNLYRGARKLGELAEIMKRVEPLFRRALEI-EEATLGPDDIQVAVTLQELGLCMRETGRPGEAE 658
BLAST of mRNA_H-paniculata_contig11899.1211.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 297 bits (760), Expect = 1.770e-84 Identity = 199/556 (35.79%), Postives = 306/556 (55.04%), Query Frame = 1 Query: 163 RISEQLETIQALLARISLSPPKLTALSMDAPRPKDWHVVRHTVVDNVYDHLAADEASWMVGLVGPGGSGKSTAAAMIVGNGLDVLRSHDGETHEKIIEGSRRVRALFPDGVVWLRVGRDGADRLPALMQELAKRVYEFVLDSKGCGPGESPIDPQNNGAAYTRETASGGMAGKGLRYLVVADDVRDKEVIKGLRKTGMRVLLTTRDPTLVEGADGRVIPVNRLTKEEADAVLIGAAEVPEDARLPHAAHFVVDRCGHVPIYVESVARWAMLRERGDETSWNRAANVIEHHFREIKAEDTVVSNRNQENDACADTRIA----ILRAGFECLE--AENSQSRWLYLALAVMPDDHAFEVYEAAVLLFGHEHTDCDLEQAVQAVAV--LERWAIVTEAGPGLYRMHNIRSAFARRAIVGQRNVLAMTVQRWRDHLSTLEVVQSVDLYALLELWQGIERIGGDGWRVSRPYNLAVSKLE-ISDSLFFPSVTVVANLYAAEGYYQGNRTWFRRSLVLQEEAGLGPEHLLVVSTLYGLIDCARKMGRLEEAESFSRRALMVL 1803 RI E I + ++S + KLT + P K W+V R V+D V++ LA+D +VGLVG GSGK+T A+ + +RS + V+ F DG+ WL V +RL +LM +LA+ VYE + GC G P ++ AAY R+ G GK L+ LVVAD+V +KEV+ L +TGM VLL+TR+ TLV A G V+ V+ L++ +A +VL AAE+P ++P A +++ CG V + + V RW+ +R R D +W+ A + + ++ + D ++ A+TR A ILRAGFE L +++ + + LYL+LAV PD HAF V +AAVLL+ E C ++A AV V LERW ++ + G YRMH+ S FAR ++ V V+RW +S LEV++S D Y L LW +E +GGDGW SR Y+ A+ ++ + +L ++ +A L A ++G T +RR L ++++ LG +H V+ + L CA ++G++ EA + + + L Sbjct: 11 RILENQSKILDHMDQLSKTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVAS-------ESVRSTE-------------VQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDI----GCSVGRRPTS-SDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDA--------SEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDRE--PCAEDEASVAVVVDTLERWTVL-RSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQ-LGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEAL 529
BLAST of mRNA_H-paniculata_contig11899.1211.1 vs. uniprot
Match: A0A6H5KU40_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU40_9PHAE) HSP 1 Score: 271 bits (693), Expect = 7.730e-75 Identity = 205/595 (34.45%), Postives = 297/595 (49.92%), Query Frame = 1 Query: 1 LEDCVQALRGLAARVSVRGTFAGVAKYRPDKTVIEGLRDRIEGLVPAMELTGVVRISEQLETIQA------------------LLAR------------------ISLSPPKLTALSMDAPRPKD-W----HVVRHTVVDNVYDHLAADEASWMVGLVGPGGSGKSTAAAMIVGNGLDVLRSHDGETHEKIIEGSRRVRALFPDGVVWLRVGRDGAD--RLPALMQELAKRVYEFVLDSKGCGPGESPIDPQNNGAAYTRETASGGMAGKGLRYLVVADDVRDKEVIKGLRKTGMRVLLTTRDPTLVEGADGRVIPVNRLTKEEADAVLIGAAEVPEDARLPHAAHFVVDRCGHVPIYVESVARWAMLRERGDETSWNRAANVIEHHFREIKAEDTVVSNRNQEND--ACADTRIAILRAGFECLEAENSQSRWLYLALAVMPDDHAFEVYEAAVLLFGHEHTDCDLEQAVQAVAVLERWAIVT-EAGPGLYRMHNIRSAFARRAIVGQ------RNVLAMTVQRWRDHLSTLEVVQSVDLYALLELWQGIERIGGD-GWRVSRPYNLAVSKLEISDSLFFPSVTVVANLYAAEG 1626 L +CV L L A S RG + PD VIE L RIE LV MEL V +SEQ+ + A LLA+ + P A AP PK W HV+R VV V ++ + + WMV LVG G+GK++ A+ + L H +R FPDG+VW+R G+ AD RL M LA V+E V + G P + + AAY + G AG+GL+ LVVADDV + EV+ LR++GM+ L+T+RD L E + G+ + ++ +T+EE +L AA++ P+ A ++D C +V + + V R +MLR + D T W RA N I EI AE VS+ + D A + R I R G++ + + +++ LYL+L ++P+ +AF V +A++LLFG D+E A VA LERWA+V E+ G YRMH+ S FAR+ + +V + V+RW HLS L+ V S+D+ LL LWQ ++ + D G RV R Y + ++ SD ++F +A LY AEG Sbjct: 62 LSECVDDLEALVADYSRRGLCSKFCN--PDSEVIEQLGKRIENLVHVMELAATVVVSEQVGGVNAAVEDLRRQLEINWARNECLLAKHETMLEECTKNIERGIKSVLQQLPAPQAERDQAPEPKGVWKPEDHVIRRHVVARVCEYFDSANSPWMVALVGRSGAGKTSTASEM------ALHYH--------------LRERFPDGIVWMRCGQGAADSARLARQMFILATWVHEDVENKLGISPSAAVAAAEGTAAAYIKTRMEQGNAGRGLKCLVVADDVWEPEVLDMLRQSGMKALITSRDYELTEASGGKAVVMDHVTEEEGMLILQKAAKLRSGESPPNEARKILDLCNYVAMELNFVGRLSMLRSQVDGTQWLRAWNEIRS---EIGAE---VSDPGGDFDDWAASKRRDVIFRVGYKDFGSGDVRNKILYLSLGILPNGYAFRVSDASLLLFG-ACQGRDMENAGDVVADLERWAVVRLESSDGTYRMHDAHSEFARKILTSALGLGFAADVRELAVRRWSAHLSCLKTVLSLDVGLLLSLWQAVDTVSCDVGIRV-RSYRAQLCSIDSSDEVYFSFAKTIAQLYYAEG 626
BLAST of mRNA_H-paniculata_contig11899.1211.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 258 bits (660), Expect = 2.110e-70 Identity = 208/652 (31.90%), Postives = 314/652 (48.16%), Query Frame = 1 Query: 1 LEDCVQALRGLAARVSVRGTFAGVAKYRPDKTVIEGLRDRIEGLVPAMELTGVVRIS----------EQLETIQA-----LLA-------RISLSPPKLTALSMDAPRPKDWHVVRHTVVDNVYDHLAADEASWMVGLVGPGGSGKSTAAAMIVGNGLDVLRSHDGETHEKIIEGSRRVRALFPDGVVWLRVGRDGADRLPALMQELAKRVYEFVLDSKGCGPGESPIDPQNNGAAYTRETASGGMAGKGLRYLVVADDVRDKEVIKGLRKTGMRVLLTTRDPTLVEGADGRVIPVNRLTKEEADAVLIGAAEVPEDARLPHAAHFVVDRCGHVPIYVESVARWAMLRERGDETSWNRAANVIEHHFREIKAED---TVVSNRNQENDACADTRIAILRAGFECLE--AENSQSRWLYLALAVMPDDHAFEVYEAAVLLFGHEHTDCDLEQAVQAVAVLERWAIVTEAGPGLYRM---------HNIRSAFARRAIVGQRNVLAMTVQRWRDHLSTLEVVQSVDLYALLELWQGIERIGGDGWRVSRPYNLAVSKLEISDS-----LFFP-------SVTVVANL------YAAEGYYQGNRTWFRRSLVLQEEAGLGPEHLLVVSTLYGLIDCARKMGRLEEAESFSRRAL 1794 +E+C++A L R RG V DK I ++ I L + L GV + E++ IQA +LA R+S +P K + P K WHV R VV+ V++ L AD +VGLVG GSGK+TAA+ IV R DRLP+LM +LA VYE + G P S ++G AY +E G G+GL+ L V D+V +KEV+ L + GM VLL+TRD LV G +G V+ VN L++ EA++VL AAE+P + RLP A +++ CG V + + R + +R R D T+W++AA+ + + + E TVV R+ R A+++AGF L +++ + + LYL+LAV+PD F V +AAVL++ + D A V +LERW+ + G YRM H+ S FAR ++ + +V + RW ++S+++ +++V + + +LW G E++GGDGW+++RPY A++ LE SD L P S++V+ +L Y G + R LV+ LG H+ V TL L C R G+ +A R L Sbjct: 76 VEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIV---------------------------------------RSNEDRLPSLMLQLAHMVYEEI---GGRRPATS-----DDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDAR-------RKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSALCSIR-GCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDPHRPTLLDMPVTKVRPYSLSVIRSLHELGLGYKHAGCLEEAEEVLRGCLVIGGTL-LGFTHVTVAKTL-DLSGCVRAAGQFAQAXXXXXRCL 670
BLAST of mRNA_H-paniculata_contig11899.1211.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.130e-63 Identity = 177/533 (33.21%), Postives = 263/533 (49.34%), Query Frame = 1 Query: 235 ALSMDAPRPKDWHVVRHTVVDNVYDHLAAD-------EASWMVGLVGPGGSGKSTAAAMIVGNGLDVLRSHDGETHEKIIEGSRRVRALFPDGVVWLRVGRDGADRLPALMQELAKRVYEFVLDSKGCGPGESP---IDPQNNGAAYTRETASGGMAGKGLRYLVVADDVRDKEVIKGLRKTGMRVLLTTRDPTLVEGADGRVIPVNRLTKEEADAVLIGAAEVPEDARLPHAAHFVVDRCGHVPIYVESVARWAMLRERGDETSWNRAANVIEHHFREIKAEDTVVSNRNQENDACADTRIAILRAGFECLEAENSQSRWLYLALAVMPDDHAFEVYEAAVLLFGHEHTDCDLEQAVQAVAVLERWAIVTEAGPGLYRMHNIRSAFARRAIVGQRNVLAMTVQRWRDHLSTLEVVQSVDLYALLELWQGIERIGGDGWRVSRPYNLAVSKLEISDSLFFPSVTVVANLY-AAEGYYQGNRTWFRRSLVLQEEAGLGPEHLLVVSTLYGLIDCARKMGRLEEAESFSRRALMV 1800 A+ APR +WHV R V D L E +VG+ GPGGSGKST A+M++ + VR F GV+WL VG LP LM LA+ VYE VL K C P +DP++ GA Y E + R+LVVADD+R+ EV++ L+ G+ VL T+R L+ GA ++ ++ +TKEE VL AA + +DA LP AAH ++ RC + + + RW ++R + DE +W A I + + N R A+LR G + LEA++ ++ LYL+LA++P AF AAVLL+G E + +LE A +A+ LER +I+T G YR+H + + F R V M + RWR + S L + + L+++W I ++ G G V+ PY+ A+ +++ S ++ A + E + ++ L+ +E A GP L V TL+ L C K GR EEAE +RAL + Sbjct: 123 AVPSGAPRIHEWHVERKEAVAEACDSLGIGSGKSEFFEMPRVVGMSGPGGSGKSTLASMVIAR--------------------QDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVL-RKACRPPRLAGVGVDPED-GAGYIHEVVNE----SNHRFLVVADDIREPEVLEELKWAGVWVLYTSRRDDLLTGAP--LLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQRCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAE------------AQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSADELEAAGKALETLERLSILTLEVSGKYRVHEVHADFVRECEVANNEEREMALARWRGYASDLRALSTYSSAWLVKIWDVIAQLEGTG-PVASPYDAALDRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLI-EETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALTI 613 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11899.1211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11899.1211.1 >prot_H-paniculata_contig11899.1211.1 ID=prot_H-paniculata_contig11899.1211.1|Name=mRNA_H-paniculata_contig11899.1211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=753bp LEDCVQALRGLAARVSVRGTFAGVAKYRPDKTVIEGLRDRIEGLVPAMELback to top mRNA from alignment at H-paniculata_contig11899:2453..5645+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11899.1211.1 ID=mRNA_H-paniculata_contig11899.1211.1|Name=mRNA_H-paniculata_contig11899.1211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3193bp|location=Sequence derived from alignment at H-paniculata_contig11899:2453..5645+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11899:2453..5645+ >mRNA_H-paniculata_contig11899.1211.1 ID=mRNA_H-paniculata_contig11899.1211.1|Name=mRNA_H-paniculata_contig11899.1211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4518bp|location=Sequence derived from alignment at H-paniculata_contig11899:2453..5645+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |