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Homology
BLAST of mRNA_H-paniculata_contig11812.1160.1 vs. uniprot
Match: A0A6H5JDD4_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD4_9PHAE) HSP 1 Score: 122 bits (305), Expect = 5.050e-26 Identity = 107/356 (30.06%), Postives = 143/356 (40.17%), Query Frame = 1
Query: 184 QSNENLILDICLVPHVGEGLDDKMGKLLGATEGAVRELVAPTGENEKHKTQWTDMWLDMLPFAIERGRRSYSHSPECEYITPFPPGTTSCPSVCMPVPMDG---DTWPMCECGKGKDIPATIHTVFKGLGLEEITGSMYRMVLSAL-----VPSCRLSAGGAIAESGKQQKGVFNGDSGGGAFVILPY---TGPSPLYAGPPRARGSIVEVTPV---DNRGG----------------AEGGAAGNARSTAVTNGRERGRGGQDMPADGASGSPFSSPQDANMTIILKKAGLSKFPTNVAEWTRVERVINGLPPDPQCANCLDPSAPKRCKKCKQVNYCSRDCQVKHWKQEHKNDC 1161
+ NE+L+LD+ L D ++ E L + + D +LP A+ERGRR+Y H P+C Y+ G DG D P+C C GKDI ++ + G E+ +Y VL L V RL + + + G G GG A + P +G Y GP R G+IVE PV RGG A GG GN +A NG+ D G D +L KAGL + P EW + ERV GLP D C C + + RC +CK V YCSR+CQ +HW HK +C
Sbjct: 157 EGNESLLLDVTLCLW-----DSQLPADFFVAESGPSALATALARGCEIVVPFLDQ---LLPMAVERGRRTYCHRPDCRYLATANSGGAGWSGR----GGDGKGKDDPPLCLCAAGKDISPSLVKGLRDSGRAEVLPRLYHAVLPTLIAVDDVEGFRLKSNALVDDEG--------GGRGGFAHLKKPVGKSSGAMLSYNGPIRGVGNIVESVPVAAVQERGGGVANQPLGSVSPSAANALGGVEGN--DSAYANGKPSSTAVSSAKTDSLVG------VDEETRRVLAKAGLGRMPATTFEWVKFERVQQGLPADTPCPVCQELNGLMRCSRCKIVKYCSRECQKQHWHTHHKLEC 484
BLAST of mRNA_H-paniculata_contig11812.1160.1 vs. uniprot
Match: A0A2P6TMS7_CHLSO (MYND-type domain-containing protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TMS7_CHLSO) HSP 1 Score: 59.7 bits (143), Expect = 7.250e-6 Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 1033 PDPQCANCLDPSAP-KRCKKCKQVNYCSRDCQVKHWKQEHKNDCARM 1170
P P+C+ C S K+C +CK YCSRDCQVKHW++ HK +CAR+
Sbjct: 337 PLPECSGCGQQSFQLKKCSRCKAAAYCSRDCQVKHWREGHKQECARL 383
BLAST of mRNA_H-paniculata_contig11812.1160.1 vs. uniprot
Match: A0A6T6FL38_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6FL38_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 2.490e-5 Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 1
Query: 1081 CKKCKQVNYCSRDCQVKHWKQEHKNDCAR 1167
C++CK+V YCSRDCQV+HWKQ HK CAR
Sbjct: 95 CQRCKRVAYCSRDCQVQHWKQGHKQQCAR 123
BLAST of mRNA_H-paniculata_contig11812.1160.1 vs. uniprot
Match: A0A6T7JZ36_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JZ36_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 3.210e-5 Identity = 27/48 (56.25%), Postives = 31/48 (64.58%), Query Frame = 1
Query: 1024 GLPPDPQCANCLDPSAPKRCKKCKQVNYCSRDCQVKHWKQEHKNDCAR 1167
G+ P C N SA K+C CKQ+ YCSRDCQV+HWK H NDC R
Sbjct: 353 GICSRPTCNN----SAEKQCAGCKQMVYCSRDCQVRHWKDGHNNDCTR 396
BLAST of mRNA_H-paniculata_contig11812.1160.1 vs. uniprot
Match: F6HWB7_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=F6HWB7_VITVI) HSP 1 Score: 57.4 bits (137), Expect = 6.310e-5 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 1
Query: 1042 QCANCLDPSAPKRCKKCKQVNYCSRDCQVKHWKQEHKNDCARMT 1173
QCA C P A RC +CK V YCS CQ+KHW+Q HKN+C T
Sbjct: 67 QCAACYGP-ATTRCSQCKAVRYCSGKCQIKHWRQGHKNECVPPT 109
BLAST of mRNA_H-paniculata_contig11812.1160.1 vs. uniprot
Match: F6GZ50_VITVI (Uncharacterized protein n=6 Tax=Vitis TaxID=3603 RepID=F6GZ50_VITVI) HSP 1 Score: 57.4 bits (137), Expect = 6.790e-5 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 1
Query: 1042 QCANCLDPSAPKRCKKCKQVNYCSRDCQVKHWKQEHKNDCARMT 1173
QCA C P A RC +CK V YCS CQ+KHW+Q HKN+C T
Sbjct: 67 QCAACYGP-ATTRCSQCKAVRYCSGKCQIKHWRQGHKNECVPPT 109
BLAST of mRNA_H-paniculata_contig11812.1160.1 vs. uniprot
Match: A0A2K1LAL7_PHYPA (MYND-type domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LAL7_PHYPA) HSP 1 Score: 55.5 bits (132), Expect = 8.530e-5 Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 1
Query: 1033 PDPQCANCLDPSAPKRCKKCKQVNYCSRDCQVKHWKQEHKNDC 1161
P+ C C P+ +RC +CK ++YCSR+CQVKHW +EHK C
Sbjct: 209 PNLNCIVCQKPTK-RRCSRCKSISYCSRECQVKHWSEEHKFQC 250
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Viridiplantae |
| Seed ortholog score | 60.1 |
| Seed ortholog evalue | 2.4e-06 |
| Seed eggNOG ortholog | 29760.VIT_00s0199g00030.t01 |
| KEGG ko | ko:K11855 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | Ubiquitin carboxyl-terminal hydrolase |
| EggNOG OGs | 37I2Y@33090,3GC8E@35493,KOG1865@1,KOG1865@2759 |
| EC | 3.4.19.12 |
| COG Functional cat. | O |
| Best tax level | Streptophyta |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01002,ko04121 |
| Exons | 7 |
| Model size | 1685 |
| Cds size | 1050 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11812.1160.1 >prot_H-paniculata_contig11812.1160.1 ID=prot_H-paniculata_contig11812.1160.1|Name=mRNA_H-paniculata_contig11812.1160.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=350bp
MWIVVTLVVNPPPPLLPCGQSNENLILDICLVPHVGEGLDDKMGKLLGAT
EGAVRELVAPTGENEKHKTQWTDMWLDMLPFAIERGRRSYSHSPECEYIT
PFPPGTTSCPSVCMPVPMDGDTWPMCECGKGKDIPATIHTVFKGLGLEEI
TGSMYRMVLSALVPSCRLSAGGAIAESGKQQKGVFNGDSGGGAFVILPYT
GPSPLYAGPPRARGSIVEVTPVDNRGGAEGGAAGNARSTAVTNGRERGRG
GQDMPADGASGSPFSSPQDANMTIILKKAGLSKFPTNVAEWTRVERVING
LPPDPQCANCLDPSAPKRCKKCKQVNYCSRDCQVKHWKQEHKNDCARMT* back to topmRNA from alignment at H-paniculata_contig11812:2..7906+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig11812.1160.1 ID=mRNA_H-paniculata_contig11812.1160.1|Name=mRNA_H-paniculata_contig11812.1160.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7905bp|location=Sequence derived from alignment at H-paniculata_contig11812:2..7906+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAGACCTCTGACTAGATTTCCAGTCATGCTCAGTTCACGAGCTACCCTA
CCCGTTCGGGCGTAGATCCGTGGTCGTTTTCGTAATATACTCAAATGTCC
CTGAGAGGTTTCATGTCCCTGAAAAAATGTGGATTGTTGTAACTCTTGTC
GTGAATCCCCCCCCGCCCCTCCTCCCCTGCGGGCAGAGCAACGAAAACCT
GATACTGGATATATGCCTGGTGCCCCACGTCGGAGAGGGCTTGGACGATA
AAATGGGCAAGTTGCTCGGCGCGACCGAAGGTGCTGTTCGAGAGCTGGTG
GTAAGTGATGAAGGAACGACGCGTAGGGGACAGAAGGAAACTAGATCGTG
TTTTTTTTATGTGTCATTTTGTTCTGTTGTGATGAAGCATCTTGATTAAA
ATAATCGATGTTCGGACAAGGTGGAAGAAAAAAGTGTGTGCACTTTCCAG
GGGTGTTCTCGGTATTTTTAGTGTATTTATTTTCAACCGCGTACAAAATG
GGTACGATTGAGAAAAGCAGTGTTTCGGGAATAACACGATGGCCACTTTG
ACCTTGAAAAAAAACGCCCCAGATGTTGTTGGCAAAATAACCATGTGAAG
CGGCGCTGCCTTAGCGTTATTCTCGTGTGTGAAAGGTTCCGAATTTTGCT
CTAGTCTGTTTACGTTTCAAGTCACACATTGCATAATTTAGCAACTTGAC
TTCCTCAGCCATTTTTCAACAAACTTCCGCTGGTGAACGATCCACCGCAC
GTCTGCTATCGGTCGTAATCCAGCGTTTCCCACAAAAAAAAAACCCGTAA
AAAACAAAAGCCAGCAAAAGTTACTCTGCAAAATATTAAAATGAGACCTC
TATTTGGACAGGATAATGCTATAGGTTATCAACGAACATTTTAGTGTTAT
GCACACTTATTTCAGGGCTTCAACCAGACCTGCCCCCCCCCCCCTACCTC
CCCACCCACTCTCCGTACGCTCCTTAATGCACTTTTATTCATGTAGGTTC
TAGCTGGTCTGGTGGGTGGTGTAGGCGAGCTAGTAGGCCTCGTTGTATGC
GACGCAAGTGCCATTGCAATCATCGCCACAGCACTATTTTGTATGACGAA
GTGATGTGTTCGTTTCGCGTAGATTTAGACTCCGCCCGACATAATATATC
GTTGCTTCACATCATCCACCTTTCGGGTGCGTAGGCCTACGAAAAGGTTT
TGTGATCGTCGGGACGATGGATGACTGATACCCCCGCGAAGTGCTGGATA
ATGATATAATACACCCTTGTTGCATTCGCCTAAACCCCCTTATCGCACTT
CGTTGAGTGTGGTACAAGCCTGCCTTCGGTAACACCACTTTGCTATTTTG
TAAAAGATCAACGCGTTTTAGACGGGTGCTATATGTACTGGGCAGACGAC
GCTCACCCTTCCTTTGGATGAGGGGGGTCTATTTTTCGCGACCTGAACGA
GTACTCTGGCGTTCCGGTTCTGGAGATGGGTACCACCTACTTTGGTGTGC
TAGTGTTCATTAGCTAGGTCGTGCTATGTCTATGCACTAGGTCATACATT
CGAGCGAAACGGTAGCCCTAGCTGCAGTTTTCAAATTTTGCTGGTGAGTG
TACCCAGCTGAGATTGTTAAGTGGACTACTTAACCTTGATATGAGTCCAA
GAAAGTTGGGGTCCTGAATTATACTACAGTAGGTGTAAGTCCCTCTCGTG
CGCCCTTTATATCTTGAGTAGGTATCCCTCCCCCTCTCCCTCTCTCCCTC
TCTCCCTCTCTCCCGCCCGCCCGCCCGCCCGACTCCCTAATGGGCTCGCG
ATTATGATACCTCCTGGACCTGCGTTTCATCCTTTTTATTTGTTAATATT
TCTTTTCAAGGCTCCTACAGGGGAAAATGAAAAACACAAAACCCAGTGGA
CGGATATGTGGTTGGACATGCTGCCATTTGCCATCGAAAGGGGTAGGCGC
AGCTACTCCCACTCGCCCGAGTGCGAGTACATAACGCCGTTTCCCCCTGG
TACGACGAGTTGCCCCAGCGTTTGCATGCCGGTGCCGATGGACGGTGACA
CCTGGCCCATGTGCGAGTGTGGCAAAGGGAAGGTATGTACTATACTGTGC
CGTGTTCCCCCAAGGGGGGGTTTAAGGGGGGAGGTACCCATGGCGTTCGG
AAAAAGAGAGTGGCAGAACCTAAAAATGTCTACCCCACCGCTGACGAAAA
GAGGTCGTTTGTGTTTAGTCTAGGATCTTGCAGATTTTGGGTTTCAAGTT
TATGTATATCATCAGTGATGACCAATCCATCAAACAATAGTAGGGAGTAG
GGTTCGATGCGGCGTTTACTAGAGTGCTGAGGAGCAAGAAAATGTAAGTG
TGAGTGTGAGTAGACGTCGATGTGTGGCAATGTCCATCTTTTTTCGCAGC
TCGACAGTCACTTTGAGCCCACTGTTTCCCCGTGGATCCTAAACCCGATA
CGTTTGTTACATTTTCCCTAGAAAACCACTCGTACTTGAGAAACAACCAT
CTAGATGTGTGCTGCACCATTGACACAACCACAACGGGGAATGGCTCTCG
ATGGCATGTACTACCCCCTGGATATCTAGCCCTGACCGATGTCCGAGAAC
TGGCTAAACGTTTGACATTTTATCTACACTGGGAATTCAAGTAGTTAGGA
ACTGCTGGACAAAGTCACCACGGTCTCTGTAAACAAGAGTCTATGACGAC
AATCTACTCGGCCCATCTAACTATTTTGTACAGTCTACATCGTTTTTTGC
TGTGGCAACATGGAGACCACGCAAAGAAGGAGGCGGTGTGCATCGAAATA
AGTGTATTTTTTTTTTCTCACTCCTTCATGATCCGCTATGGAGCTCCGTG
GGTGGATACCCGTAATGCGCCTGATGTGGTCGATTTTTCTACAGCCCCGA
AATCAAACAGCTTTTGTGATAGAAAGCTATCAATAAAGAGTAATAACTTG
CGTATATATTTTTCCGATCCACCGTTAGTCTATTGATTGGTTAGTTGATT
CCGCCGCAATGTTACTAATTACTTTTTGGTGATAAGCCGTACGCGATAAC
TCCCCCCCCTTCCCCCCCCGTAGAACTACCTTCATAAGAGCACCTCTGTT
CAGCGTAGACTTGAAGAAAAGGAGTCAAGCATGTGCGTCAAAACAAGTAC
CTATGCCACAAGCTATCCCAAAACTACGCCGTTCACAAGTCGCACGCAGT
AATTATCTGTGTAACAACGAAACGCAGGACATTCCGGCTACCATTCATAC
AGTTTTCAAGGGCTTGGGGCTTGAGGAGATTACCGGGAGCATGTACCGCA
TGGTCCTGTCCGCGCTAGTCCCGTCTTGTCGCTTGAGCGCCGGCGGCGCC
ATTGCGGAGTCTGGCAAGCAGCAGAAGGGCGTGTTCAACGGAGATAGCGG
TGGTGGGGCCTTTGTAATACTACCGTACACTGGGCCTTCGCCCTTGTACG
CTGGTCCACCCAGGGCCCGAGGCAGCATTGTGGAGGTAATTTTGTTTTTG
GTGCTGGTTTGGAGAACACATTCCTGACGTTCCTGGGGTTCCCGGACCCC
GCTCCCTCTATACAACAACCAGCGATATTTTTTGTGTCCCATCCAGGATG
ACCAGTCTATTCACAAAAACATAACGAACGCAAGTGCGTGGTCCGTACTC
CATCCCGAGACTTGAAACCAACTCGCAGAGCAGGCGGTGTCCTCTCGAGA
CCTAGTCTCTCCTGGGAGCATCGCGTTCTCATTTCGTGTTCGGCGGTAGG
GTTCGAATTTTTTTTAATCCCTTTGTCATGGTGTCTCTGGAAGGATGTTT
GCATTGTTTGCTTGTTCGCGGGGGGGTGGGGAAGCAGGACAGATAGTTTT
TTTTATTTAGGTATGCGGCAGTGAGTGAATACTACGACATCGAACAGCGT
TTGTGTTTTTTGCAGGCTTTTTTGTTTTAAATCCCGTGGAAGCATTTACG
TGTGTGGTAATTGCCTTGGGGGGGAGGAGAGAGTTGCGTTTTGTGGATAT
GATGTTTCAGTGAGTAGGAGTACTGTGCTTCTTTTTTAGCAGTACTTTGG
TGCATTGTGCGTTCAATCGGAATATTTTCACTCATATAAAAAGCATTCCG
CTCGTTTACTACATGTGTGATACTGCAGGATCCAGCGTTGTCGAGATGAT
CTTTTAAAGGAGTCCTTGTTTACATGACTGTGTAATGCGTATTACCGCTG
GGACATTCCCGTTCTGTGCGTGTGTCTTTGCGTTGTGTGTGTGTGTATGT
GTTTGGCGTGCAGGTTACTCCCGTGGACAATCGTGGCGGGGCAGAAGGAG
GTGCGAAGTTTGAGGGTCGACGATCACGACGATCACGATGATATCAGTTG
ATGGTTTACTATTTCGTTTTTTTGGGCGAGACGTAAAATACAAGATATGC
CGTTATCTACAGAGCAAGAACTGGTAGTTTTGAGGGCTACTCGCCCCTCC
TCCCCATTCCTGTACGCGCGCCGCCGCGTACATGTTCAGAGGCTTGTTGA
GAGAGGTTTCGAAAAAGGATACTGCCCGTCTAGATGGAATAAAAACTGTC
CCCTGTTGAGGCTGTTTGCATACTGCTGTGTGTGTAACCCCCTGCATATC
CTTACGCCTTACAACACACAACGCGAGGCCAGAACAGGTAAAACGCGCGC
AGGGTGTCAAAGATTTGAATGACCAGCTAAAACCGACACTCTGAGGTTAG
CTTGCAACGCTGCATGAGGCAGACGTTAACTTTTGCAGCGATTTTTTTTA
CGTTTTGTTTAATATGTTTTTATATCTCTTTTGGAAGTGGGCTCGTTGTG
CCCGCTCGCCGCCGCGGCTGTCAAGTTTGTAGGTCTGTTGAAAATTTTTG
ACGTATGTTCCCCCACGGGCTTTTGTAATTTTGACAGTAATTTCTTGGTC
GTCATGTCCGTTTTGGAATATTTGCATGTCTGTACTCGAGTGCATTCTGA
AAAGGATTTTGCTGTGCAGCGCAGCTAGTCGTTGTGGGTTTGGTTCTTGA
TAGAGCGAAAAAGTATGGACCCCACGGCCGAAGGCATGGTCTTACTCCAC
TCGACGCGTGGTACGTGAGACAGTATTTCGTTCCTTCCTTCTATGTTTCC
TATCACTGGATTACTCTCTTGTTAGGACGACGGTGTGTGTGTGTTCAAGA
CTTCTAGAATCTAAGCGAACAGACTTGGTTGCCCTTGTTGAAGCCACTAG
AGCCCCAAGGATGTAGGGTATGCGGTTGGATTTATAATACCTTTGATTCC
TGTAGGCACCCACCCGCCCACACACCTACGCTTATTCTAGAAACTAGGGC
AACAGAGAATTTCAAACCGGCTGGCGGGTCAGCAAGGTCCCGCGCGTTAC
ACAAAGAGCCCGCATCACACTATCACCACTCTTGGTTGAGAGCTCCTCAA
CAACTCCTCCCCCTCCCCCCCCCCCGAGTGCCGAAGTTTCGTGATGGTAT
TTTGTGCTGTGTCAATACCAACCAATGAAGCACATGCTAGCCACGAAGTT
AGCTCGCAAAAACAATTCCTTTCGTTGGTACCTGTCGCATTACAATTCAT
TCCCCGTCGGATGGATGGATGGATAGGTGCAGCAGGCAACGCGAGAAGCA
CGGCTGTAACCAACGGAAGGGAGCGCGGTCGAGGGGGGCAAGACATGCCC
GCCGATGGTGCCTCGGGCTCCCCTTTCTCTTCCCCACAGGACGCGAACAT
GACCATCATCCTGAAAAAGGCGGGCTTGAGCAAGTTTCCCACCAATGTGG
CAGAGTGGACTCGTGTGGAGCGTGTGATAAACGGCGAGTGTTGGTGTCTT
GGCGTCAGGAGAGAGCACAGAGTTCTCTCGAAATGGTTATCACATTTGCC
TTCCGACAAGACAATGTGCAGATTCTGCGTTTTTTTCGTCAAGAAAAGAA
ATCGAGCAGACGTGCTCAATTCGAGGAAGGCGCATGCATGTGTCGGTGTA
TCTGATTCTGGGGCGACAGAGGGAAGAGATAGAGAAGAGAAAATGTGCCA
TTGCATCGCATCCTCGCGTCCGCTCCATCTTTTTGCGTGGAAAAAGGGGA
AGTATGTTAACTAAAACTGTCTCTCTCTGTCTTCGTGTCTCTGCCTCTGT
CTTTGTCTCTCTGTCTCTCTGTCTTTCTCTCTCTGTCTCCCTTGTCCTGT
CTTTTCTTTTTCTGTTTGGCTTTGCAATGACGCAGGGCTTCCCCCGGATC
CCCAGTGCGCCAACTGCCTAGACCCCTCTGCGCCCAAGCGTTGCAAGAAA
TGCAAACAAGTCAACTGTGAGTTCGCGATTGTATTTAGTCATTGCGCTTG
TTGTTGAGAACTGATCGCTACATCGCTACCTCTTGTCCTTCGCGCGGGAA
GGAAGAGTTTGAAGTCACGCTAGAAGGTCGCTCGTTTCGGCTCGAGTTGC
TGCTTGGAGCTGGTATAGATAGAACGGTAGAAGCGCCAAGATGTGGATGT
GTTGCAGAGTAGGTCGCCCGTAGCAGGCTTGTGTCCGCAGCGTTGCGTTC
TTTCCAGGAACATTTTATCTTGGTTCGTCAAGAGAGAAGTGCGTGCTGCA
ACGGAGGGGTGATATCGGCTTCTGGGGGAAAATGGCCGCACCGTTCTTGT
ATTTTCTCGTCGCGTTCGTTATGTATGTAGCTTTTCATTCGAGCCTTGGT
GCGATGTGACACGTTGTGGGTGGCACGAAGGAAACGCACTCCATAAAGAG
CTTTTGTTTTTCCCAATCAGCCATTCCTCCATAAGGTAGTCTTCCCCTCC
GCTTTTTTGCTGGACCTTTTGCTTGCTTCGCTAACGTCTCCTGTGATTCC
GGGACATGGGTAATGATGTTGATCGGGTAAAGATTGAGTGTTATACACAC
TGGTGGTGCACACGGTGTGTGAGTGCGTTCTTGTTGTATGCCAATTGAGG
TAAAAACTGAAGTCGGCACGCGATACGCGGTGCTTACACAGTTTTTTCTC
CGAGTCATTGTCCATATTCATGCACTACCGTACTGTAACTGGGTAGGTCC
TGCCCATGTCTAATGTCCATATCGCCCTTTTTAGCTTGTTTTTTTTCTCT
TCTAGTGTGTGATGAATTCGAGGAGTATATATACGCATGCTCACGTATTT
TTTGTTAAAACATGAAATACGGCACGTTTCAGAATATGTTCATTTTTTAC
ACGGTCAAATATTCCCATCTGCAACTGGTTGATCGGCACTGCTCCCAGGT
CTTGTGTATGTATGTCCCCGCCCCCTCCTGACCCCGTGCACGGCGCGCGT
TTGCTCCTACCTCAACCTTTCTTTGTCAAATTGTGTTTGCGGCGTTTGTA
CGTACACCCTTTGACACTCGTCAAGACTGCTCTCGGGACTGCCAGGTGAA
GCACTGGAAGCAGGAGCACAAGAACGATTGCGCGAGGATGACTTAGCTTC
CACTTTGAAGCTTGAAGCAATCACGTGCGTGCTGTTTCCGTTACTCTAGC
ACATGTTGTCGGTCTAGTTGCAGATAAAGTGGAAATTGTCCTTTTCGGGG
AGTCTGCTGAACTTTCAGCAGAAGGCCAAACGGCGCTACAGTAATGGTAT
CGATATGAGAGAGAGTAGTGTCAAGCCGCTTCTCTTTTATACGAACCCTA
TATTCTTGGATACAAAAGATGTTTTTCTTTTATATGGAGCGAAATTTGTT
ACGGACGATTGTAACTGGTCACGGGAAGCGAGGCACAGATGCAGTTGTTG
CCCAAGCATTTTTTAAGCATTTTTTAAGCATTTCACAGTGTAGGTGGTAT
ATAATTGCGACTTATATTCCCGCTTTTTGTGCCCGTTGACGTCAAGCTTG
GTGAGCATGCTGGTGTTCAAAGACGTGTTTTCTGTGTCATATTGTACTGT
TGGTGTACTACTGTTCGACCTCGCACAATACCCTCATGCCCCACCGACCT
ACGCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig11812:2..7906+ >mRNA_H-paniculata_contig11812.1160.1 ID=mRNA_H-paniculata_contig11812.1160.1|Name=mRNA_H-paniculata_contig11812.1160.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2100bp|location=Sequence derived from alignment at H-paniculata_contig11812:2..7906+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGGATTGTTGTAACTCTTGTCGTGAATCCCCCCCCGCCCCTCCTCCC
CTGCGGGCAGAGCAACGAAAACCTGATACTGGATATATGCCTGGTGCCCC
ACGTCGGAGAGGGCTTGGACGATAAAATGGGCAAGTTGCTCGGCGCGACC
GAAGGTGCTGTTCGAGAGCTGGTGATGTGGATTGTTGTAACTCTTGTCGT
GAATCCCCCCCCGCCCCTCCTCCCCTGCGGGCAGAGCAACGAAAACCTGA
TACTGGATATATGCCTGGTGCCCCACGTCGGAGAGGGCTTGGACGATAAA
ATGGGCAAGTTGCTCGGCGCGACCGAAGGTGCTGTTCGAGAGCTGGTGGC
TCCTACAGGGGAAAATGAAAAACACAAAACCCAGTGGACGGATATGTGGT
TGGACATGCTGCCATTTGCCATCGAAAGGGGTAGGCGCAGCTACTCCCAC
TCGCCCGAGTGCGAGTACATAACGCCGTTTCCCCCTGGTACGACGAGTTG
CCCCAGCGTTTGCATGCCGGTGCCGATGGACGGTGACACCTGGCCCATGT
GCGAGTGTGGCAAAGGGAAGGCTCCTACAGGGGAAAATGAAAAACACAAA
ACCCAGTGGACGGATATGTGGTTGGACATGCTGCCATTTGCCATCGAAAG
GGGTAGGCGCAGCTACTCCCACTCGCCCGAGTGCGAGTACATAACGCCGT
TTCCCCCTGGTACGACGAGTTGCCCCAGCGTTTGCATGCCGGTGCCGATG
GACGGTGACACCTGGCCCATGTGCGAGTGTGGCAAAGGGAAGGACATTCC
GGCTACCATTCATACAGTTTTCAAGGGCTTGGGGCTTGAGGAGATTACCG
GGAGCATGTACCGCATGGTCCTGTCCGCGCTAGTCCCGTCTTGTCGCTTG
AGCGCCGGCGGCGCCATTGCGGAGTCTGGCAAGCAGCAGAAGGGCGTGTT
CAACGGAGATAGCGGTGGTGGGGCCTTTGTAATACTACCGTACACTGGGC
CTTCGCCCTTGTACGCTGGTCCACCCAGGGCCCGAGGCAGCATTGTGGAG
GACATTCCGGCTACCATTCATACAGTTTTCAAGGGCTTGGGGCTTGAGGA
GATTACCGGGAGCATGTACCGCATGGTCCTGTCCGCGCTAGTCCCGTCTT
GTCGCTTGAGCGCCGGCGGCGCCATTGCGGAGTCTGGCAAGCAGCAGAAG
GGCGTGTTCAACGGAGATAGCGGTGGTGGGGCCTTTGTAATACTACCGTA
CACTGGGCCTTCGCCCTTGTACGCTGGTCCACCCAGGGCCCGAGGCAGCA
TTGTGGAGGTTACTCCCGTGGACAATCGTGGCGGGGCAGAAGGAGGTTAC
TCCCGTGGACAATCGTGGCGGGGCAGAAGGAGGTGCAGCAGGCAACGCGA
GAAGCACGGCTGTAACCAACGGAAGGGAGCGCGGTCGAGGGGGGCAAGAC
ATGCCCGCCGATGGTGCCTCGGGCTCCCCTTTCTCTTCCCCACAGGACGC
GAACATGACCATCATCCTGAAAAAGGCGGGCTTGAGCAAGTTTCCCACCA
ATGTGGCAGAGTGGACTCGTGTGGAGCGTGTGATAAACGGTGCAGCAGGC
AACGCGAGAAGCACGGCTGTAACCAACGGAAGGGAGCGCGGTCGAGGGGG
GCAAGACATGCCCGCCGATGGTGCCTCGGGCTCCCCTTTCTCTTCCCCAC
AGGACGCGAACATGACCATCATCCTGAAAAAGGCGGGCTTGAGCAAGTTT
CCCACCAATGTGGCAGAGTGGACTCGTGTGGAGCGTGTGATAAACGGGCT
TCCCCCGGATCCCCAGTGCGCCAACTGCCTAGACCCCTCTGCGCCCAAGC
GTTGCAAGAAATGCAAACAAGTCAACTGGCTTCCCCCGGATCCCCAGTGC
GCCAACTGCCTAGACCCCTCTGCGCCCAAGCGTTGCAAGAAATGCAAACA
AGTCAACTACTGCTCTCGGGACTGCCAGGTGAAGCACTGGAAGCAGGAGC
ACAAGAACGATTGCGCGAGGATGACTTAGACTGCTCTCGGGACTGCCAGG
TGAAGCACTGGAAGCAGGAGCACAAGAACGATTGCGCGAGGATGACTTAG back to top
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