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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | EsV-1-7 domain protein |
| Ec32 ortholog | Ec-03_002140.1 |
| Exons | 3 |
| Model size | 1960 |
| Cds size | 894 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11685.1078.1 >prot_H-paniculata_contig11685.1078.1 ID=prot_H-paniculata_contig11685.1078.1|Name=mRNA_H-paniculata_contig11685.1078.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
MFSKAFDATHNDRMYDQYNNSSAAAATGIAGVVGVGVGHVSASAISDQPG
DGSGCNAGHDGSSHGSFAGQLPAAEVAGGMVMSHGEIDLTGLGEGLADDG
TMLLTERGTKRWLAKYCQESTCSKAPSYGPKGKLPLRCMGHKVDGDVYVK
NQCLQMGCTKVSTFGLPRGRAAYCLAHKYSYMVDVKSKTCEHKSCRRRSS
FGEAGKSARFCSSHRPMGMVDVVHRRCEYNHCEKHPTYGYPGQKRRFCSQ
HVLAGMVDLLKTKNRMLPGDVHMGGGIVHPGAHSGLGGGETVNFAPV* back to topmRNA from alignment at H-paniculata_contig11685:40..3007- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig11685.1078.1 ID=mRNA_H-paniculata_contig11685.1078.1|Name=mRNA_H-paniculata_contig11685.1078.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2968bp|location=Sequence derived from alignment at H-paniculata_contig11685:40..3007- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTTGGGGTCGGAGCTAGCGGGTCCGTTCTCGATGACAGCGTTGTTCATC
ACAATAATGGCCACCGTCAAGGCAGCCATCAACAGGCTGAACACAATGCG
GCGACGCCCCTGCCGCCGCCGCCACCACCCCACGATTACGACCCTTCTGT
CTATAACCAGGGGCTCGAAAATCACCCAGTGGGTGCGGTAGCAGAAGATG
GCCTCGGCGTGCCTCTTCCTGCACAACACCACCACAACATTAACAGCCAG
AACCAACACCAAAACCAACACATGTTCAGCAAGGCGTTCGACGCCACCCA
CAATGACCGAATGTACGATCAGTACAACAACAGCTCTGCCGCCGCCGCCA
CCGGAATCGCAGGAGTTGTTGGGGTGGGTGTTGGGCACGTCTCAGCCTCG
GCTATCAGTGACCAACCCGGAGATGGCAGCGGGTGCAATGCGGGTCATGA
TGGGAGCTCGCATGGAAGTTTTGCCGGACAACTGCCGGCGGCAGAAGTGG
CAGGGGGCATGGTCATGTCTCACGGGGAAATAGACTTAACGGGGTTGGGA
GAAGGTCTTGCCGACGACGGTACCATGTTGTTGACCGAGAGGGGAACGAA
GAGATGGCTGGCGAAATATTGCCAAGAGAGTACATGTTCCAAGGCACCAA
GTTACGGGCCCAAAGGAAAGCTCCCACTGAGGTGCATGGGACACAAGGTG
GACGGTGACGTGTACGTGAAGAACCAATGCCTTCAAATGGGCTGCACTAA
GGTGTGTGTGTATGTATGTATGTATGTGTGTGTGCGTGTGTATGTGTGTG
TGTGTGTGTGTGTGTGTGTCTGCCTGTGTGTCTTGCTTGTTGTACCTGGA
TGATTCATGTTTTCACCTGAAACTGGTAGAGGAGGGGGATAATGCACCGC
AGAGAGTGAGGAAGGAATTGCCGGCTTACGGAGAGAAGTCACAGGTGGAA
TTGCGGGAGGGTTTCCTGACGACCCCCCCCAAATGTTTTCCTTGTAGCGA
ATTTTATCTGGTTATTTTGAGATATTCTAGGTGTGCTGCACAAATTCAAC
CCAACATTATAGACAAGACCGTACAGCACAAAGAGATGTAGCGAAAATTC
AAGCCCCGGAATGCGACAAAGCACTCCTCTCTCTCTTTCGCTCTCTTTCT
CTCTCTCTATATATATATATTATATATATGTACCTCTGTCTTTTTCTCCG
TATTTCTATCATAGGTTAGCACTTTCGGTCTCCCCCGGGGCCGAGCGGCG
TACTGCTTGGCCCACAAATACAGCTATATGGTAGACGTCAAGTCGAAGAC
CTGCGAGCACAAGAGTTGCAGGCGTCGTAGCAGCTTCGGGGAGGCTGGGA
AGTCGGCTAGGTTTTGCTCCAGCCACCGACCAATGGGCATGGTCGATGTC
GTCCATCGGCGCTGCGAGTACAATCACTGTGAGAAGCACCCGACATACGG
CTACCCTGGTCAGAAGCGGAGGTTTTGCTCTCAGCACGTGGTGAGTAAAA
AGTATGAAACAAAAGGAAATTGGTCCAGGCAGGCAGAGCTTGTCCCAAGA
TGGATTGCTCAGTTCCGACAGATGTGTGTGTGTGTGTATGTTTCGATTGT
AGGTCTTGTTGTAACGGTTTTCGATATTGCACGTTGTTGTTAATTTCTTT
ATCCCAGTGTCGTTTCGTTATTTTAGTCGAGAAATGCTGTAAATGATGTG
TTCTCCTATTCATCTCGTCGGCAAAGCGCTCAGGAAGATTTACTCTCAAA
CTCGGGAGGACGACGTATTGATGGCCACTGCCGGGGGGGGGGGGGGGGGG
GGGGGGTTGTGTTGTCCCCCACTTGAAACACGTGGTTGCCTCCACCTGAA
GGTGGCGTATCCAGTGCTCTTTGGTGGCCTCTTTGGTGGCTCGTTCTAGC
CTACTGTACCGCACTCCGCAAGGTCTTGTATAGGTTGTGGTCAAAGTTTT
TCAACGCCAACCAATGCTCCCTCGCCCACCTGCCTCCTCTTGCCGTTCCA
CCTCCACTACTATCAACAAATCCTTGCCTAATCAGCTTGCCGGCATGGTC
GACCTTCTTAAGACCAAGAACAGGATGCTACCCGGCGATGTGCACATGGG
AGGCGGGATCGTCCACCCGGGAGCGCACTCCGGTCTTGGCGGGGGTGAAA
CTGTGAATTTCGCTCCAGTGTAGTTCATGTCTCTCGTTTTGTTTGTACAA
TAGCATCATAACTTAACACCCGCTCGAACTGGTACAGAACAAAGTGGATC
AAATGTGGGAAACGACAGCGTGAATGAAAGCAGCAGGCAGCAAATCGGTG
TCGGGGACTAGTTTGGCTCGTGCTCGGAGTTTGTCGTGCACAATGACTCC
CCTCACCATCATGTGGGTAGTTCGAGAGACCAGACAGCAACGTTTGAGCC
ACCTCTGACCTATCGTCTAAATATGTCGGGAGCTGCAAGATGATGATGGT
AGCAGAGTGCAGCGCAGTGAGTTTGAAAATGTATGTTGTGTGTACAATCA
GTGTACTGTAAGTTTCCTCCTGTGTGTGTGTGGTGTATAGCCTGAGATAG
CACCTTCCATCGGATATGCCTCAAAGAGTTGACCGCAGATACCTCTCGAC
GGCAGGAGAGATCGTGGACGTTTCGCCAAATGTATTTTTCGAAGTCGAAT
GAGTGTGATCGTGTCATCGACACTCACTCCTCATCTAGAATGTGACACAA
CCTCTGCGCTCTTGTGTTTGTCGTGCCTGCTGTTGTACGTGTGCATGTGT
AAAGTTCTTTGGGTAGGCATGTCCATGTATACGACCTAAACACATAACAC
AGTCAGCGTCTGGATGGCGTTCGCTTTTTATTTTCTGCGAATTGTCTCTG
TTTTTGCTTTTTTGCTCAACCCCCGGAAGGCTGAGGCAAAAACCTTTATC
CGATACTTCCATACCGAAGTACGTCTACATTTTCTTTTACAAAACAGAGT
TATTTGTTCCTCTGCGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig11685:40..3007- >mRNA_H-paniculata_contig11685.1078.1 ID=mRNA_H-paniculata_contig11685.1078.1|Name=mRNA_H-paniculata_contig11685.1078.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1788bp|location=Sequence derived from alignment at H-paniculata_contig11685:40..3007- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCAGCAAGGCGTTCGACGCCACCCACAATGACCGAATGTACGATCA
GTACAACAACAGCTCTGCCGCCGCCGCCACCGGAATCGCAGGAGTTGTTG
GGGTGGGTGTTGGGCACGTCTCAGCCTCGGCTATCAGTGACCAACCCGGA
GATGGCAGCGGGTGCAATGCGGGTCATGATGGGAGCTCGCATGGAAGTTT
TGCCGGACAACTGCCGGCGGCAGAAGTGGCAGGGGGCATGGTCATGTCTC
ACGGGGAAATAGACTTAACGGGGTTGGGAGAAGGTCTTGCCGACGACGGT
ACCATGTTGTTGACCGAGAGGGGAACGAAGAGATGGCTGGCGAAATATTG
CCAAGAGAGTACATGTTCCAAGGCACCAAGTTACGGGCCCAAAGGAAAGC
TCCCACTGAGGTGCATGGGACACAAGGTGGACGGTGACGTGTACGTGAAG
AACCAATGCCTTCAAATGGGCTGCACTAAGATGTTCAGCAAGGCGTTCGA
CGCCACCCACAATGACCGAATGTACGATCAGTACAACAACAGCTCTGCCG
CCGCCGCCACCGGAATCGCAGGAGTTGTTGGGGTGGGTGTTGGGCACGTC
TCAGCCTCGGCTATCAGTGACCAACCCGGAGATGGCAGCGGGTGCAATGC
GGGTCATGATGGGAGCTCGCATGGAAGTTTTGCCGGACAACTGCCGGCGG
CAGAAGTGGCAGGGGGCATGGTCATGTCTCACGGGGAAATAGACTTAACG
GGGTTGGGAGAAGGTCTTGCCGACGACGGTACCATGTTGTTGACCGAGAG
GGGAACGAAGAGATGGCTGGCGAAATATTGCCAAGAGAGTACATGTTCCA
AGGCACCAAGTTACGGGCCCAAAGGAAAGCTCCCACTGAGGTGCATGGGA
CACAAGGTGGACGGTGACGTGTACGTGAAGAACCAATGCCTTCAAATGGG
CTGCACTAAGGTTAGCACTTTCGGTCTCCCCCGGGGCCGAGCGGCGTACT
GCTTGGCCCACAAATACAGCTATATGGTAGACGTCAAGTCGAAGACCTGC
GAGCACAAGAGTTGCAGGCGTCGTAGCAGCTTCGGGGAGGCTGGGAAGTC
GGCTAGGTTTTGCTCCAGCCACCGACCAATGGGCATGGTCGATGTCGTCC
ATCGGCGCTGCGAGTACAATCACTGTGAGAAGCACCCGACATACGGCTAC
CCTGGTCAGAAGCGGAGGTTTTGCTCTCAGCACGTGGTTAGCACTTTCGG
TCTCCCCCGGGGCCGAGCGGCGTACTGCTTGGCCCACAAATACAGCTATA
TGGTAGACGTCAAGTCGAAGACCTGCGAGCACAAGAGTTGCAGGCGTCGT
AGCAGCTTCGGGGAGGCTGGGAAGTCGGCTAGGTTTTGCTCCAGCCACCG
ACCAATGGGCATGGTCGATGTCGTCCATCGGCGCTGCGAGTACAATCACT
GTGAGAAGCACCCGACATACGGCTACCCTGGTCAGAAGCGGAGGTTTTGC
TCTCAGCACGTGCTTGCCGGCATGGTCGACCTTCTTAAGACCAAGAACAG
GATGCTACCCGGCGATGTGCACATGGGAGGCGGGATCGTCCACCCGGGAG
CGCACTCCGGTCTTGGCGGGGGTGAAACTGTGAATTTCGCTCCAGTGTAG
CTTGCCGGCATGGTCGACCTTCTTAAGACCAAGAACAGGATGCTACCCGG
CGATGTGCACATGGGAGGCGGGATCGTCCACCCGGGAGCGCACTCCGGTC
TTGGCGGGGGTGAAACTGTGAATTTCGCTCCAGTGTAG back to top
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