mRNA_H-paniculata_contig11643.1059.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11643.1059.1
Unique NamemRNA_H-paniculata_contig11643.1059.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig11643.1059.1 vs. uniprot
Match: A0A6H5JLP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP7_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 4.670e-88
Identity = 134/186 (72.04%), Postives = 155/186 (83.33%), Query Frame = 1 
Query:    1 GPGGLCTPNLHPKGSAADVMLASDVCLMCVHTEEQTIDALAGEDGLLTVGAREMTDKASLVIVDHGTVSPRFSRKMADAVVQGGGSFLDAPISGGPEGAKNGTLSIMVGGKEEHLDICRPVFEAMGSRVEHMGAAGAGAATKLVNQHLVIAHVVAACEAYVLGRQLGLRDTNKLRDLLHASWGQRQ 558
            GPGGL TP+LH   S ADVMLASDVCL+CVHTE+Q+++ALAGEDGLL VG++ M DK   +IVDHGTVSP F++ M+ AV++GGG+FLDAPISGGP+GA  GTLSIMVGGKEEHL  C PV EAMGSR+EHMG  GAGAA KLVNQHLVI + VAACEAYVL R+LGL DT KL+ LL ASWG R+
Sbjct:   53 GPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKVMADK---IIVDHGTVSPSFAKSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEEHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKLKALLEASWGHRR 235
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BLAST of mRNA_H-paniculata_contig11643.1059.1 vs. uniprot
Match: D8LJL1_ECTSI (6-phosphogluconate dehydrogenase NAD-binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL1_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.140e-85
Identity = 135/192 (70.31%), Postives = 155/192 (80.73%), Query Frame = 1 
Query:    1 GPGGLCTPNLHPKGSAADVMLASDVCLMCVHTEEQTIDALAGEDGLLTVGAREMTDKASLVIVDHGTVSPRFSRKMADAVVQGGGSFLDAPISGGPEGAKNGTLSIMVGGKEEHLDICRPVFEAMGSRVEHMGAAGAGAATKLVNQHLVIAHVVAACEAYVLGRQLGLRDTNKLRDLLHASWGQRQVTGQNL 576
            GPGGL TP+LH   S ADVMLASDVCL+CVHTE+Q+++ALAGEDGLL VG++ M DK   +IVDHGTVSP F+R M+ AV++GGG+FLDAPISGGP+GA  GTLSIMVGGK EHL  C PV EAMGSR+EHMG  GAGAA KLVNQHLVI + VAACEAYVL R+LGL D  KL+ LL ASWG  Q+  Q L
Sbjct:   53 GPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKVMADK---IIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKGEHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVIINTVAACEAYVLARRLGLSDMGKLKALLGASWGHSQMLDQVL 241
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BLAST of mRNA_H-paniculata_contig11643.1059.1 vs. uniprot
Match: A0A2D8MY99_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D8MY99_9BACT)

HSP 1 Score: 138 bits (347), Expect = 1.230e-36
Identity = 78/166 (46.99%), Postives = 104/166 (62.65%), Query Frame = 1 
Query:   64 ASDVCLMCVHTEEQTIDALAGEDGLLTVGAREMTDKASLVIVDHGTVSPRFSRKMADAVVQGGGSFLDAPISGGPEGAKNGTLSIMVGGKEEHLDICRPVFEAMGSRVEHMGAAGAGAATKLVNQHLVIAHVVAACEAYVLGRQLGLRDTNKLRDLLHASWGQRQV 561
            A+D+ L C+     T +    E+G+L          A  + VDHGTV    SR +  A ++ G +FLDAPISGGPEGA  GTL+IM GG  E  +  RPVFEAMGS+V HMG AGAG ATKL NQ LV  + +A CEA  + R +G+ D  +L+D+L ++WGQ ++
Sbjct:   54 AADIILTCLADIAVTRELFLEEEGILAEAV------AGKIFVDHGTVDLDTSRALHAACLERGAAFLDAPISGGPEGASAGTLAIMAGGDREVFERARPVFEAMGSKVVHMGPAGAGTATKLANQLLVGVNSLACCEALTMARGVGV-DLEQLQDVLASAWGQSRM 212
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BLAST of mRNA_H-paniculata_contig11643.1059.1 vs. uniprot
Match: A0A5N9B005_9CHLR (NAD(P)-dependent oxidoreductase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A5N9B005_9CHLR)

HSP 1 Score: 135 bits (341), Expect = 9.820e-36
Identity = 77/187 (41.18%), Postives = 113/187 (60.43%), Query Frame = 1 
Query:   28 LHPKGSAA-----DVMLASDVCLMCVHTEEQTIDALAGEDGLLTVGAREMTDKASLVIVDHGTVSPRFSRKMADAVVQGGGSFLDAPISGGPEGAKNGTLSIMVGGKEEHLDICRPVFEAMGSRVEHMGAAGAGAATKLVNQHLVIAHVVAACEAYVLGRQLGLRDTNKLRDLLHASWGQRQVTGQN 573
            +  KG+ A     +V    D+ + C+  E+ + +    +  L++  ARE       + VDHGTVSP  SR M ++ +     FLDAPISGGP+GA  GTL+IMVGG E+  +  +PVFE+MG  V HMG +GAGA TK++NQ LV  + +A+CEA++L  + G+ D NKL  +L  +WG   +  +N
Sbjct:   39 MEKKGAVACSSPIEVASKVDIVMACLIDEQASRNIFLEKYALIS-NARE-----GQIFVDHGTVSPDLSRTMYESAINKNAHFLDAPISGGPDGAAKGTLAIMVGGDEDPFNYAKPVFESMGKTVSHMGKSGAGAVTKIINQLLVGVNGMASCEAFLLASKAGV-DLNKLWGILQGAWGGSTILNRN 218
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BLAST of mRNA_H-paniculata_contig11643.1059.1 vs. uniprot
Match: A0A1U9K633_9BACL (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Novibacillus thermophilus TaxID=1471761 RepID=A0A1U9K633_9BACL)

HSP 1 Score: 133 bits (335), Expect = 9.630e-35
Identity = 73/169 (43.20%), Postives = 105/169 (62.13%), Query Frame = 1 
Query:   43 SAADVMLASDVCLMCVHTEEQTIDALAGEDGLLTVGAREMTDKASLVIVDHGTVSPRFSRKMADAVVQGGGSFLDAPISGGPEGAKNGTLSIMVGGKEEHLDICRPVFEAMGSRVEHMGAAGAGAATKLVNQHLVIAHVVAACEAYVLGRQLGLRDTNKLRDLLHASWG 549
            S  ++    DV +MC+   E   D + GE G++  GARE      L++ DH TVSP  ++K+A+++ + G  FLDAPISGGP GA+ GTL++MVGG+++H    +PVF+A G  V H+G  G+G+  KLVNQ LV  H  A  EA+VL  + GL D   + D++  S G
Sbjct:   52 SPCELAQTVDVLMMCLPLPETVEDVVFGEQGIVH-GARE-----GLIVADHSTVSPALNKKVAESLAEKGAGFLDAPISGGPMGAEAGTLTVMVGGEKDHFTRAKPVFDAFGKNVVHVGDVGSGSGVKLVNQLLVGVHTAALSEAFVLAVKAGL-DPQLVTDVIRNSTG 213
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BLAST of mRNA_H-paniculata_contig11643.1059.1 vs. uniprot
Match: A0A356FFG8_9BACT (2-hydroxy-3-oxopropionate reductase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356FFG8_9BACT)

HSP 1 Score: 131 bits (330), Expect = 4.130e-34
Identity = 75/170 (44.12%), Postives = 102/170 (60.00%), Query Frame = 1 
Query:   52 DVMLASDVCLMCVHTEEQTIDALAGEDGLLTVGAREMTDKASLVIVDHGTVSPRFSRKMADAVVQGGGSFLDAPISGGPEGAKNGTLSIMVGGKEEHLDICRPVFEAMGSRVEHMGAAGAGAATKLVNQHLVIAHVVAACEAYVLGRQLGLRDTNKLRDLLHASWGQRQV 561
            D++  +D+ L+C+       +   GE+G++             + VDHGTV    SR +  A    G  FLDAPISGGPEGA  GTL+IM GG+ +  +  RPVF+AMGS+V HMG AGAG A KL NQ +V  + +A CEA  + RQ+G  D  KL+DLL  +WGQ ++
Sbjct:   50 DLVREADLVLVCLADIASGREFFLGEEGVVDDSVE------GKIFVDHGTVDLATSRDLHAACGAQGAGFLDAPISGGPEGASAGTLAIMAGGEPDIFERARPVFDAMGSKVVHMGPAGAGTAAKLANQLMVGVNSLACCEALTMARQVGA-DLEKLQDLLANAWGQSRM 212
[Close]
BLAST of mRNA_H-paniculata_contig11643.1059.1 vs. uniprot
Match: A0A2E7N783_9CHLR (2-hydroxy-3-oxopropionate reductase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2E7N783_9CHLR)

HSP 1 Score: 132 bits (331), Expect = 4.610e-34
Identity = 76/169 (44.97%), Postives = 98/169 (57.99%), Query Frame = 1 
Query:   43 SAADVMLASDVCLMCVHTEEQTIDALAGEDGLLTVGAREMTDKASLVIVDHGTVSPRFSRKMADAVVQGGGSFLDAPISGGPEGAKNGTLSIMVGGKEEHLDICRPVFEAMGSRVEHMGAAGAGAATKLVNQHLVIAHVVAACEAYVLGRQLGLRDTNKLRDLLHASWG 549
            S A++  + +  L+C+   + + D L GEDG++         ++  VIVDHGTV    SR  A+A    G  FLDAPISGGP GA +GTLSIMVGG EE  ++    F  MG+ ++HMG  GAG A KL+NQ LV  H VAA EA+ L     + D     DLL  SWG
Sbjct:   68 SVAELTKSVETVLVCLPDVQTSHDVLLGEDGVVA------NARSGQVIVDHGTVDVATSRACAEAAEAKGAHFLDAPISGGPGGAADGTLSIMVGGSEEAFELAYEHFNNMGANIKHMGPTGAGTAMKLINQLLVGVHTVAAAEAFALANSAQV-DVQTAADLLSVSWG 229
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BLAST of mRNA_H-paniculata_contig11643.1059.1 vs. uniprot
Match: A0A2E6Z192_9CHLR (Uncharacterized protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2E6Z192_9CHLR)

HSP 1 Score: 131 bits (330), Expect = 4.740e-34
Identity = 74/177 (41.81%), Postives = 104/177 (58.76%), Query Frame = 1 
Query:   43 SAADVMLASDVCLMCVHTEEQTIDALAGEDGLLTVGAREMTDKASLVIVDHGTVSPRFSRKMADAVVQGGGSFLDAPISGGPEGAKNGTLSIMVGGKEEHLDICRPVFEAMGSRVEHMGAAGAGAATKLVNQHLVIAHVVAACEAYVLGRQLGLRDTNKLRDLLHASWGQRQVTGQN 573
            S  ++   SD+ L C+   + + D + G DG++          ++ ++VDH TV  + S+  ++   +   SFLDAPISGGP GA  GTL+IMVGG +   +    VFE MG ++ HMG +GAG A KLVNQ LV  + VAA EA+VL  Q G+ D N   D+L  SWGQ Q+  +N
Sbjct:   52 SLKELTTNSDIILTCLPNVDTSRDLILGSDGIINHA------NSNQILVDHSTVDIKTSQDCSNVAAEKNISFLDAPISGGPIGASEGTLTIMVGGNKTAFEKSSSVFEMMGGKISHMGKSGAGTAMKLVNQLLVSTNTVAAAEAFVLAEQAGV-DLNSAIDILSTSWGQSQMIERN 221
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BLAST of mRNA_H-paniculata_contig11643.1059.1 vs. uniprot
Match: A0A1I0QGH7_9GAMM (3-hydroxyisobutyrate dehydrogenase n=2 Tax=unclassified Luteibacter TaxID=2620188 RepID=A0A1I0QGH7_9GAMM)

HSP 1 Score: 125 bits (315), Expect = 6.480e-32
Identity = 74/166 (44.58%), Postives = 95/166 (57.23%), Query Frame = 1 
Query:   43 SAADVMLASDVCLMCVHTEEQTIDALAGEDGLLTVGAREMTDKASLVIVDHGTVSPRFSRKMADAVVQGGGSFLDAPISGGPEGAKNGTLSIMVGGKEEHLDICRPVFEAMGSRVEHMGAAGAGAATKLVNQHLVIAHVVAACEAYVLGRQLGLRDTNKLRDLLHA 540
            S A++  + DV  +CV  +   I           V A   + KA  +++DH TV+P  + K A  + + GGSFLDAP+SGG EGAKNG LS+MVGG  + LD  RPV EA G+R+ HMG  G+G ATK VNQ LV     A  E   LG  LGL D ++L   L A
Sbjct:   51 SLAEIAASCDVIALCVSADADVIGV---------VEALAPSLKAGAIVIDHSTVAPATATKAARLIAEAGGSFLDAPVSGGVEGAKNGKLSVMVGGDADVLDRARPVLEAYGARITHMGKVGSGQATKAVNQVLVAGIAHAVTEGLALGEALGL-DADRLIPTLAA 206
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BLAST of mRNA_H-paniculata_contig11643.1059.1 vs. uniprot
Match: A0A229UJN7_9BACL (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Paenibacillus rigui TaxID=554312 RepID=A0A229UJN7_9BACL)

HSP 1 Score: 125 bits (313), Expect = 1.600e-31
Identity = 72/174 (41.38%), Postives = 105/174 (60.34%), Query Frame = 1 
Query:   40 GSAADVMLASDVCLMCVHTEEQTIDALAGEDGLLTVGAREMTDKASLVIVDHGTVSPRFSRKMADAVVQGGGSFLDAPISGGPEGAKNGTLSIMVGGKEEHLDICRPVFEAMGSRVEHMGAAGAGAATKLVNQHLVIAHVVAACEAYVLGRQLGLRDTNKLRDLLHASWGQRQV 561
            GS A++   +DV + C+   +       G++G++  G      K   V++D  TVSP   RK+A A  + G +FLDAP+SGG  GA+ GTLSIM GGK E     +PV EA+G  + H+G  G+G   KL+NQ +V  H  AA EA VLG+QLG+ D++ L  +L+AS+ Q ++
Sbjct:   49 GSIAELTREADVVMTCLPMPQDVEAVYLGDNGIVQHG------KEGQVLIDFSTVSPGVVRKVAAAAERKGMAFLDAPVSGGTVGAETGTLSIMAGGKPEIFARVKPVLEALGQNIYHVGEVGSGTIVKLINQLMVGIHTQAASEALVLGQQLGI-DSDTLFPILNASFAQSRI 215
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11643.1059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLP7_9PHAE4.670e-8872.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJL1_ECTSI1.140e-8570.316-phosphogluconate dehydrogenase NAD-binding n=1 T... [more]
A0A2D8MY99_9BACT1.230e-3646.99Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A5N9B005_9CHLR9.820e-3641.18NAD(P)-dependent oxidoreductase n=2 Tax=Chloroflex... [more]
A0A1U9K633_9BACL9.630e-3543.203-hydroxyisobutyrate dehydrogenase n=1 Tax=Novibac... [more]
A0A356FFG8_9BACT4.130e-3444.122-hydroxy-3-oxopropionate reductase n=1 Tax=Planct... [more]
A0A2E7N783_9CHLR4.610e-3444.972-hydroxy-3-oxopropionate reductase n=2 Tax=Chloro... [more]
A0A2E6Z192_9CHLR4.740e-3441.81Uncharacterized protein n=2 Tax=Chloroflexi TaxID=... [more]
A0A1I0QGH7_9GAMM6.480e-3244.583-hydroxyisobutyrate dehydrogenase n=2 Tax=unclass... [more]
A0A229UJN7_9BACL1.600e-3141.383-hydroxyisobutyrate dehydrogenase n=1 Tax=Paeniba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11643contigH-paniculata_contig11643:2977..7874 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.2
Seed ortholog evalue1.3e-68
Seed eggNOG ortholog2880.D8LJL1
KEGG rclassRC00099
KEGG koko:K00020
KEGG ReactionR05066
KEGG Pathwayko00280,ko01100,map00280,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.3hydroxyisobutyrate dehydrogenase
EggNOG OGsCOG2084@1,KOG0409@2759
EC1.1.1.31
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size591
Cds size591
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11643.1059.1prot_H-paniculata_contig11643.1059.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11643 2977..7874 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928873.7784562-CDS-H-paniculata_contig11643:2976..31291622928873.7784562-CDS-H-paniculata_contig11643:2976..3129Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11643 2977..3129 -
1691480652.4646487-CDS-H-paniculata_contig11643:2976..31291691480652.4646487-CDS-H-paniculata_contig11643:2976..3129Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11643 2977..3129 -
1622928873.7909563-CDS-H-paniculata_contig11643:4625..47591622928873.7909563-CDS-H-paniculata_contig11643:4625..4759Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11643 4626..4759 -
1691480652.47803-CDS-H-paniculata_contig11643:4625..47591691480652.47803-CDS-H-paniculata_contig11643:4625..4759Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11643 4626..4759 -
1622928873.8864586-CDS-H-paniculata_contig11643:5092..52161622928873.8864586-CDS-H-paniculata_contig11643:5092..5216Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11643 5093..5216 -
1691480652.4869392-CDS-H-paniculata_contig11643:5092..52161691480652.4869392-CDS-H-paniculata_contig11643:5092..5216Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11643 5093..5216 -
1622928873.9265041-CDS-H-paniculata_contig11643:7694..78741622928873.9265041-CDS-H-paniculata_contig11643:7694..7874Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11643 7695..7874 -
1691480652.4965477-CDS-H-paniculata_contig11643:7694..78741691480652.4965477-CDS-H-paniculata_contig11643:7694..7874Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11643 7695..7874 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11643.1059.1

>prot_H-paniculata_contig11643.1059.1 ID=prot_H-paniculata_contig11643.1059.1|Name=mRNA_H-paniculata_contig11643.1059.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp
GPGGLCTPNLHPKGSAADVMLASDVCLMCVHTEEQTIDALAGEDGLLTVG
AREMTDKASLVIVDHGTVSPRFSRKMADAVVQGGGSFLDAPISGGPEGAK
NGTLSIMVGGKEEHLDICRPVFEAMGSRVEHMGAAGAGAATKLVNQHLVI
AHVVAACEAYVLGRQLGLRDTNKLRDLLHASWGQRQVTGQNLTNQN*
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mRNA from alignment at H-paniculata_contig11643:2977..7874-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11643.1059.1 ID=mRNA_H-paniculata_contig11643.1059.1|Name=mRNA_H-paniculata_contig11643.1059.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4898bp|location=Sequence derived from alignment at H-paniculata_contig11643:2977..7874- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCCCGGGTGGGCTTTGCACACCCAATCTCCACCCGAAAGGATCTGCCGC
TGACGTCATGCTCGCGAGCGACGTGTGCCTGATGTGCGTTCACACGGAAG
AACAGACCATAGACGCGCTTGCTGGCGAGGACGGACTGCTGACCGTGGGT
GCCAGAGAGATGACAGATAAGGCGAGTCTCGTAGACTCCAAGTGTTACGA
GCCATCATATTTACACGGGTGACCAGAGTGAGGTGGGTTGGCTATCTTTA
CGGCAGACATCGGGGCAAAAAGTAAGCCCCTAAAGTTCAACTGTTACAAG
CCGCCATAGTTATGCAGGTGACGACCAGAGGGCCCCCTTGCGGGGGTATT
GGGAGAGAACGTGGGACGTCCCTACGTAGCGATGAGGCTATACAGTAGGT
GGACCCCTCTAAGTCCTCCCCCCACCTCCTTCAACCTCTGGCCTGCTTTA
AGACCCCCAAATCTACTGTCACAACCGCTGCCTGCTGTAACCCCCCCCGC
GGGAGGAGTTAACGAGGTCTTTCTACTCTATACAAGTGGTGGGTACTCGG
AGGAACCCTACCAGTGTAGCTTCCCTGTGGGCTTGAACAAGCGCCAGATC
GGCTTCCCTAAATATAACTCTTCCTCCCCTCCTCCTGAAGCTCTCCCTGA
GGTTCCTGGGCGCTGGCGGGGGGGAGGGATTCAAGGGACCTACCCACCGT
ACTACTACGGTTGGACTTATGAGGAGGATAATGGTATGGTCAAATTCCCA
TATAATACGTCAAGACGCTGTAAATCCCTTCGCAGCGCCCGGGAATCGAA
AGCAGAGAGTGGCGCCACCTGTGTACATGCACCATTACATTACAATTTCG
AGTAGTTAATTCATCAGATGCTGTCCTGCTGACCAGATCTTCAGAGCCTG
TCCTCTTTTCTCGTGATGGTTGATTTTTTTTTTTTTTTTGTGTACTACTT
TATTGTCTACATGACTCCATTTTTTTTTTTTGTCGCGAGATAGTCCATCT
CTCGGAACCTCCGACTCGAATCTGGGAGTGTACTGATCGCCTCGGTTCTT
GCCTTATGTTATCGCGCTGTGCGGTGGGGGGGCAGCAGTCCCACTCGCTC
GTCAACGTTGGAGTTGCACGGCGGTATACTCTTGAGAGTACTGATTTATT
CCCCCTTCCGAAGGCATTTTGTTGTTGTTGCTGCGTACTGCCGTTTTTTC
GTCGGAGTAGTAAATGGATGTGTACTGTGGAGATACTAATGATAGTGACA
AACTCATCAGATGGCCCCATCTGATCCCCTAGGTGGACATTTGTATATTT
TTGTTATTAGTGATGATTGTTGCTATGCTAGGTCGTGCTGTGTCTGCCTG
TGCGCGTTACACACGTGTAAGATATTACTGCACTCTCCGGGTAGATCCAG
TAGATAGCCTACGCGCTGTTTCCATTCGAAGCGGTGCTGTCAGTCTTGTT
TATTTGTTGGTACGTGGTTGTAAACGAGGTGATTTCCCCCGCTGCCTCCC
CTGTTGCGTTATATATTCAACTCGAGAGTTAAGCTCTAGCCACGACTTCA
GTTGTCGACTATCATAACTTGTCTCTTCAGGGAACTCATGACCTCTCAAT
TAGTTATGCATGGTTTGTTTGTTATTTGGTCGTTGCGGACAAAAGACGGT
GTTGGCCGGTTCTTGCTTTACACTATGTCCTAGATAAAATCTCCCAAACG
ACCAAAATAAATAAATCAGATCTCTCTTTTGTTCCTGAGATGTGATATAG
ACAGTTACTGATCAGATAGCTGTCTAGAGCTCGTGAGGCATTCTGTCGAT
GTATTCGTTATAATCCATTATTAACGACTGGTCGCTAGCAGCATCTACCT
TTTGGTCGTTGCATAAAGTCCGGTTGGTTCCTAAAGGTTTAAATGAAACG
GGAGGGGGTAAAGATTGTGAGACCGCCGAAGTAAGGTTTATCCACTCAAG
GAGGGTTCGCAAGGTATATGTGTCTTGTGTCGGGTTTCCATTTGGAGGTC
ACAATCGCTATGTGCGTTATACAGTATATGGTGTAGTATTTTGTGATACG
ATGACAATTATACTTCCCACTTGCCCCCTTCGTTGCTCTCTTTAGTTTTG
CTCATTAGTAGTAGTGCACCTAGTTTTAATTCGGTTTGTGGTATCAATCA
CTCTCGGCAGTACGGCAGTTGATAATTTAGCTGAACAAAGGTACCTACCT
CCGATTTAGATTGAAGGATTTTAATTGGCATGTTTGTGGGGGGTTTTCCA
ATTTAACACCTGGTGTACAGACAATATTTGTACCGTTTTGAACCACACTT
CGTGTTGTTGTTGTTGTTGTTGTTGTTGTTAATTGTTGTTGTTAGTTATT
GTTGTTGTTGTTATCATGCTCCCTCAAGGTGCGTTATTGTATCCACGTTA
TTTGATATATATATATATATATCTACATGTTTTCAGCGTTAAAGTATCAG
TATGTCAGGGTAAACCTGTTTTATTTATTGACGTAGTCAAAGAAGGGATT
CACCCGAAGATGGTTTGTGTGTTTATTTTAGCGTGAAATTTTGATTTTGA
TTTCAAATAAGCAAAAGTAATAGCAAAAGGAAAAATAGACCCCCCCCCCC
GTCCCCCCAACTTTCCCCCTCCTTCCGCCGTCTTGCCATCCCTTGTTATT
ACGCCCAGGTCATAGTGGATCATGGCACGGTGTCCCCTCGATTTTCACGG
AAAATGGCCGATGCGGTGGTGCAGGGTGGGGGTTCTTTTCTCGACGCGCC
TATCAGTGGGGGTCCGGAGGGGGCAAAGAACGGTGTGTGGGGAATTGTCA
ATTGTGCGGTCTGAGAAGGCTGGGGGGTTGGTGGTTGTGGCGCCGGTTTT
CGGCGGAGGATAAAGTGTGGTGTGCTTTTCTATTTATGCTTCAAGAGTAA
CTACGGTGATGGGTTGTGATTGTGGTTGTGGTTGTGGTTGTTATTGTTAC
TTAATGTGTACCATTCTAAAACTGCCAGAATTATCATCAATAACCGCCAA
ATGAACAGTTTTGAAAAAAAAAAAAACTTCTATCTTAATTGATTAATTAT
TACTTCACCCCCGAGCATACCTGAAAAATAATTGTTTTTGTATCTCGATC
CTGTGTTTTTTCCAGGCACGCTTTCTATCATGGTAGGTGGCAAGGAGGAG
CACCTCGACATCTGCCGACCTGTGTTCGAGGCAATGGGCAGCCGTGTTGA
GCACATGGGTGCCGCTGGAGCCGGGGCGGCTACCAAGTTGGTCAATCAGG
TGTGACTGCCGCCTCTCTAACTCACTGCCTGCCTGCTGATGCGTTTTTAC
TCGAGATTATTTTTTTGTATTTTTTTCTTGAAAGGCATCCGAGGTCGTCA
CTGTTGGTTCAGTATATCAGTATCCGTACCGGTAGCTGCGGAAGTACCCG
GTATAATATTGATCTTGATTTAGTGCTCCAGTATGTTGTATTTTTGGACT
TGATGGCAAAATAGCAGGGAGAGGAGGAGGTGGGAAGGAGACACATAGAG
GAGGGAATACCCAGTGTATTTGGAACAATTTTTGGTCAGGTTTTTCGTGA
TGAATCGAGTCCAGTAAACAAGTAGAGTGCTGAATACTGGTACAGTATTG
AACCCCCGGAATGACTATGGCTCTTGACTATTTACGAATATTCTAGAAAA
TAGTTGCTTGATTTTTTCAGAATGAATAATCACTGTTTTTTTTTTATGTG
CCCCAGATCATTTTCCACTGCTCCGAATACTAGTAAAAAACGAACAAACA
GGGGTGAGCACTTTGTTCTACGTGTCGTTATCCACTCCGGACATTTGGGA
ACTCAGGTGACTATTTTTTTGTAGAATAGTCACAAATAGTCATGGTCGTC
CGGGGGGTGCAGTGCGGTGTACTGTGATGGTGGTTAAGAGAGATGTCGCG
AATACCATAGTCCAATTCGATGACCCCTGGCGAATCGGAATTTTCATGTA
ACAGTCAACGTTGAAGTATTGAAGTGTTATTGTCGATCCGGCCGGTGGAA
CAAGACGATGAATCGTTCGGTCTCTCGTGTGGGTCTCATGGTTGGTTGCT
CTTGAAATAACTATTTATCATGAAGACCATCATCCAGTGGACGTCTGATA
TATCAAAATTGCCCCGTTAGGATTTTTCAAGTATGTGTCGATGTGTCGAT
GTGTCGATGTGTCGATGTGTCGATGTGTCGGGGTCTTTTTTTTGTTGCGA
ATTTTCTGATTTCTCTTTTATTTTTTATTTTTGTTCGTTTTTTTTTTTTT
CGTTTTTTTTTTTTTCGTTTTTTTTTTGTGATGATAATTGCTGTGCGGTA
TTGCGGAGTATCTCACACACGTAGGTTGTTGTTTCCTGTTACTGATTGTG
CTTATGCTGTACAATACTCTGAGAGCGGTACGGCCTGGGGTGGCAGAAGT
AGTCCTTGGCCATGGTCTGGTCTCTTGTATTAGCTGTATGTATATTGCTA
TACAGTCAGGGACAGCCCTGGGTTGATACAAGTCTGACAGCAGGTGGGGC
GGCAACAAGTTCCGTGCTTTCCGCTCCCAGCTCAAACTGAGGCTATATTA
CATAACCCCGGGGATTGGGGATGGAACCGTCACATTAGACAATGAATCAC
GTCCCGCAATCAACATCTCATAACATTTTGGTCACTTTTCCCCTCTTTCT
CCCCTTCCCCCCTCATCTGTTTTGACGTTTCCTGTTGATCTCATTGATCG
CTCGTCCGTCCGTCCCGATGTCCGTTTTTCTCTTCTCATCGACAGCACCT
TGTCATCGCACACGTCGTGGCGGCGTGCGAAGCGTACGTCCTGGGAAGAC
AGCTCGGGCTTCGAGATACCAACAAGCTTCGTGACTTGCTTCACGCATCA
TGGGGACAAAGGCAAGTAACAGGTCAAAATTTAACCAACCAGAACTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig11643:2977..7874-

>mRNA_H-paniculata_contig11643.1059.1 ID=mRNA_H-paniculata_contig11643.1059.1|Name=mRNA_H-paniculata_contig11643.1059.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at H-paniculata_contig11643:2977..7874- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCCCGGGTGGGCTTTGCACACCCAATCTCCACCCGAAAGGATCTGCCGC
TGACGTCATGCTCGCGAGCGACGTGTGCCTGATGTGCGTTCACACGGAAG
AACAGACCATAGACGCGCTTGCTGGCGAGGACGGACTGCTGACCGTGGGT
GCCAGAGAGATGACAGATAAGGCGAGTCTCGGCCCGGGTGGGCTTTGCAC
ACCCAATCTCCACCCGAAAGGATCTGCCGCTGACGTCATGCTCGCGAGCG
ACGTGTGCCTGATGTGCGTTCACACGGAAGAACAGACCATAGACGCGCTT
GCTGGCGAGGACGGACTGCTGACCGTGGGTGCCAGAGAGATGACAGATAA
GGCGAGTCTCGTCATAGTGGATCATGGCACGGTGTCCCCTCGATTTTCAC
GGAAAATGGCCGATGCGGTGGTGCAGGGTGGGGGTTCTTTTCTCGACGCG
CCTATCAGTGGGGGTCCGGAGGGGGCAAAGAACGGTCATAGTGGATCATG
GCACGGTGTCCCCTCGATTTTCACGGAAAATGGCCGATGCGGTGGTGCAG
GGTGGGGGTTCTTTTCTCGACGCGCCTATCAGTGGGGGTCCGGAGGGGGC
AAAGAACGGCACGCTTTCTATCATGGTAGGTGGCAAGGAGGAGCACCTCG
ACATCTGCCGACCTGTGTTCGAGGCAATGGGCAGCCGTGTTGAGCACATG
GGTGCCGCTGGAGCCGGGGCGGCTACCAAGTTGGTCAATCAGGCACGCTT
TCTATCATGGTAGGTGGCAAGGAGGAGCACCTCGACATCTGCCGACCTGT
GTTCGAGGCAATGGGCAGCCGTGTTGAGCACATGGGTGCCGCTGGAGCCG
GGGCGGCTACCAAGTTGGTCAATCAGCACCTTGTCATCGCACACGTCGTG
GCGGCGTGCGAAGCGTACGTCCTGGGAAGACAGCTCGGGCTTCGAGATAC
CAACAAGCTTCGTGACTTGCTTCACGCATCATGGGGACAAAGGCAAGTAA
CAGGTCAAAATTTAACCAACCAGAACTGACACCTTGTCATCGCACACGTC
GTGGCGGCGTGCGAAGCGTACGTCCTGGGAAGACAGCTCGGGCTTCGAGA
TACCAACAAGCTTCGTGACTTGCTTCACGCATCATGGGGACAAAGGCAAG
TAACAGGTCAAAATTTAACCAACCAGAACTGA
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