mRNA_H-paniculata_contig11631.1057.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11631.1057.1 vs. uniprot
Match: A0A6H5J6X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6X1_9PHAE) HSP 1 Score: 233 bits (594), Expect = 6.130e-66 Identity = 224/522 (42.91%), Postives = 266/522 (50.96%), Query Frame = 1 Query: 1 TFYSYEALLHTMLHELVHMEINPHNAKFYKMLDELRVECEKLMREGITGTNMPFAGDGRSLGGGRAPIDARTAALKAAEKRQRQQGIMGSG-QRLGGSTAATGS----AAERAAAAAEWRQAVSTGCVITGTSGCHGRGGDKGCSSSAPGRPVGGSSDREGWDCELCTLHNSDPNLIACEACGTARPASTTAGSLKSGEGEGRQGAKGSSPR--AAGREGGKRSRYHNPYRAASG-------SIVAAAGTSSGRGAPARPSXXXXXXXXXXXXXXXXXAGMGGFMLGTWTCRQCPFAFPNAAERETCESCGVPTRVDAAWSAGGXXXXXXW--AGFEGRTVEG-------LVVPWTCSVCTVINPETFLVCGTCQTSRES---------------------RIASAFSRTV---------------SGQAGSGGGD------GAVTTDTNQDDCWNRNSVDGGSMTAGTPTMSS--SSSDVGRT--CAICTLRNNVQAVVCVACGFPLRESAVAEAAAVRTG 1359 +FY YE ++ TMLHELVH +I PH+AKFY++LD+L EC+KL REGITG NMPFAGDG+ LGGGRAP DAR AALKAAEKRQRQQGIMGSG QRLGG + ++ S AA+RAAAAA+WR AVS GC G GC++ + + D + W+C LCTL NS + AC+ACG R A T AG G G A G G++ R AA+G S A S GR A P XXXXXXXXXXX AG TWTCR CPF+FPN +ER TCESCG + A +G XXXXXX A G T G L+ WTC CTV+NP FL C C R + ++S ++ V + Q SGG D GA +T V G T P M S S+ G T C +CTLRN +A C ACG PL ES A AA G Sbjct: 128 SFYPYEFIIGTMLHELVHNQIGPHSAKFYRVLDQLNDECDKLTREGITGRNMPFAGDGQPLGGGRAPNDARAAALKAAEKRQRQQGIMGSGGQRLGGVSGSSPSDAISAAQRAAAAAQWRHAVSQGCR-----------GHHGCTAGV--KADDDADDGDHWECGLCTLFNS-LTVNACDACGKERSA-TPAGKSVRGRGXXXXXXXXXXXXXVAGGTTTGRQKRPAPTTGAAAGAGRLQNKSTAGARMASDGRSVGA-PRGGXXXXXXXXXXXRLPSAGR------TWTCRSCPFSFPNVSERRTCESCGAARLLPADAGSGXXXXXXXXXAATAVGGTTGGHTSWGAELLPSWTCEACTVVNPGMFLGCSVCGAERPADEAAEAGXXXXXXXXXXXXXATLSSEWTAEVGXXXXXXXXXXXGWMAAQGSSGGTDCSVGVGGAAVGET----------VGFGGRTRDDPGMESCWSAQPTGETRVCRLCTLRNPPEASNCKACGIPLAESEAAVAATASGG 617
BLAST of mRNA_H-paniculata_contig11631.1057.1 vs. uniprot
Match: D7FMC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC5_ECTSI) HSP 1 Score: 176 bits (446), Expect = 2.930e-45 Identity = 196/530 (36.98%), Postives = 233/530 (43.96%), Query Frame = 1 Query: 1 TFYSYEALLHTMLHELVHMEINPHNAKFYKMLDELRVECEKLMREGITGTNMPFAGDGRSLGGGRAPIDARTAALKAAEKRQRQQGIMGSG-QRLGGSTAATGSAAERAAAAAEWRQA----VSTGCVITGTSGCHGRGGDKGCSSSAPGRPVGGSSDR-EGWDCELCTLHNSDPNLIACEACGTARPASTTAGSLKSGEGEGRQGAKGSSPRAAGREGGKRSRYH--------------------------------NPYRAASGSIVAAAGTSSGR--GAPARPSXXXXXXXXXXXXXXXXXAGMGGFMLGTWTCRQCPFAFPNAAERETCESCGVPTRVDAAWSAGGXXXXXXWAGFEGRTVEG--------LVVPWTCSVCTVINPETFLVCGTCQTSRESRIA-------------SAFSRTVSGQAGSGGG------------DGAVTTDTNQDDCWNRNSVDGGSMTAGTPTMSS--SSSDVG--RTCAICTLRNNVQAVVCVACGFPLRESAVAEAAAVRTG 1359 +FY YE +L TMLHELVH +I PH+AKFY+MLD+L EC+KL+REGITG NMPFAGDG+SLGGGRAP DAR AALKA QRLGG + + VS GC GG GC++ G G ++D + W+C LCTL NS + AC+ACG R A+ S++ R AG G R P R S A S GR GAP XXXXXXXXXXX AG TWTCR CPF+FPNA+ER TCESCG + A +G XXXXXX R G L+ WTC CTV+NP FL C C R + A + S + + G GGG G R +V G P M S S+ G R C +CTLRN +A C ACG PL +S A AA G Sbjct: 83 SFYPYEFILGTMLHELVHNQIGPHSAKFYRMLDQLNDECDKLIREGITGRNMPFAGDGQSLGGGRAPEDARAAALKAXXXXXXXXXXXXXXXQRLGGVSGSXXXXXXXXXXXXXXXXXXXXXVSQGC-----------GGHHGCTA---GEKTGDNADDGDHWECGLCTLFNS-LTVNACDACGKERSANPPGNSVRD--------------RGAGSSTGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGRLQKKSTAGARTASDGRSVGAP----RGXXXXXXXXXXXGLPSAGR------TWTCRSCPFSFPNASERRTCESCGAARLLPADAGSGXXXXXXXXXATAIRGTTGGHTSWDAELLPSWTCDACTVVNPGMFLGCSVCGAERPAEEAXXXXXXXXXXXNLATLSSEWTAEVGRGGGVTAGGWMAAQGSSGGTDCSVGVGTADVRETVGIGGRIRDDPGMESWGSAQPAGEARMCRLCTLRNPPEASDCEACGIPLADSEAAVAATASGG 573
BLAST of mRNA_H-paniculata_contig11631.1057.1 vs. uniprot
Match: A0A0J8BEE3_BETVV (Uncharacterized protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8BEE3_BETVV) HSP 1 Score: 112 bits (280), Expect = 4.290e-24 Identity = 84/196 (42.86%), Postives = 103/196 (52.55%), Query Frame = 1 Query: 4 FYSYEALLHTMLHELVHMEINPHNAKFYKMLDELRVECEKLMREGITGTNMPFAGDGRSLGGGRAPIDA---RTAALKAAEKRQRQQGIMGSGQRL---GGSTAATGSAAERAAAAAEWRQAVSTGCVITGTSGCHGRGGDKGCSSSAPGR----------PVGGSSDREGWDCELCTLHNSDPNLIACEACGTAR 543 F+ YE +L TMLHEL H + PHNA FYK+LDELR+ECE+LM +GITGT F GR LGG P R +AL AAE+R ++ +M +G R GS S + AA AAE R C T G HG + SSS R P G ++ W C +CTL N P +ACEAC T R Sbjct: 84 FFPYEQILDTMLHELCHNQHGPHNADFYKLLDELRLECEELMAKGITGTGRGFDVPGRRLGGFSQPAPLPLLRQSALAAAERRAQRGTLMPAGPRYIGGDGSIKTALSPTQAAAMAAERRLHDDVWCGSQ-TLGTHGERANNNASSSMDSRMPISSVQFQPPHGKIESQDTWQCSICTLINK-PLALACEACQTLR 277
BLAST of mRNA_H-paniculata_contig11631.1057.1 vs. uniprot
Match: A0A498J441_MALDO (Uncharacterized protein n=3 Tax=Maleae TaxID=721813 RepID=A0A498J441_MALDO) HSP 1 Score: 102 bits (255), Expect = 2.850e-20 Identity = 83/199 (41.71%), Postives = 105/199 (52.76%), Query Frame = 1 Query: 4 FYSYEALLHTMLHELVHMEINPHNAKFYKMLDELRVECEKLMREGITGTNMPFAGDGRSLGG--GRAPIDA-RTAALKAAEKRQRQQGIMGSG-QRLGGST--AATGSAAERAAAAAEWRQAVSTGC---VITGTSGCHGRGGDK----------GCSSSAPGRPVGGSSDREGWDCELCTLHNSDPNLIACEACGTAR 543 FY YE +L TMLHEL H E PHNA FY++LDE+R ECE+L+ +GI+GT F GR LGG +AP+ + R AL AAE R R+ ++ SG +RLGG + A S + AA AAE R C G G HG G G S+ P D+ W C +CTL N P + C ACGT + Sbjct: 83 FYPYEQILDTMLHELCHNEHGPHNADFYRLLDEIRRECEELIAKGISGTGQGFDLPGRRLGGFSRQAPLSSIRQTALAAAETRARRGALLPSGPKRLGGDSNIKAALSPVQAAAMAAERRLHDDLWCGSKSSEGDIGVHGNIGTSQRPQPFAFTDGVSNIKPKPGQEEMDDQAKWKCSMCTLLNK-PLTLRCTACGTLK 280
BLAST of mRNA_H-paniculata_contig11631.1057.1 vs. uniprot
Match: A0A314Z6I9_PRUYE (DNA-dependent metalloprotease WSS1 isoform X2 n=2 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314Z6I9_PRUYE) HSP 1 Score: 96.3 bits (238), Expect = 1.220e-18 Identity = 82/203 (40.39%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 4 FYSYEALLHTMLHELVHMEINPHNAKFYKMLDELRVECEKLMREGITGTNMPFAGDGRSLGG--GRAPIDA-RTAALKAAEKRQRQQGIMGSG-QRLGGST--AATGSAAERAAAAAEWR---------QAVSTGCVITGTSGCHGRGGD-----KGCSSSAPGRPVGGSS---DREGWDCELCTLHNSDPNLIACEACGTAR 543 FY YE +L TMLHEL H E PHNA FYK+LDE+R ECE+LM +GITGT F G+ LGG + P+ + R AL AAE R R+ + SG +RLGG + A S + AA AAE R +++ G + G G RG + G S+ G D+ W C +CTL N + + C ACGT + Sbjct: 45 FYPYEQILDTMLHELCHNEYGPHNADFYKLLDEIRRECEELMAKGITGTAQGFDLPGKRLGGFSRQPPLSSIRQTALAAAENRARRGALPPSGPRRLGGDSNIKAALSPIQAAAMAAERRLHDDLWCGSKSLEGGIEVQGNVGTS-RGAEAFTVTNGISTQTSIESRSGQDKIDDQAKWKCNMCTLLN-ELLALRCSACGTLK 245
BLAST of mRNA_H-paniculata_contig11631.1057.1 vs. uniprot
Match: A0A1U8QCF1_NELNU (DNA-dependent metalloprotease WSS1-like isoform X2 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8QCF1_NELNU) HSP 1 Score: 97.1 bits (240), Expect = 1.380e-18 Identity = 84/211 (39.81%), Postives = 104/211 (49.29%), Query Frame = 1 Query: 4 FYSYEALLHTMLHELVHMEINPHNAKFYKMLDELRVECEKLMREGITGTNMPFAGDGRSLGG--GRAPI-DARTAALKAAEKRQRQQGIMGSG-QRLGGS--TAATGSAAERAAAAAEWRQAVSTGCVITGTSGCHG---------RGGDKGC-------------SSSAP---GRPVGGSSDREGWDCELCTLHNSDPNLIACEACGTAR 543 F+ Y +L TMLHEL H E PHN +FYK+LDE+R ECE+L+ +GITG+ F GR LGG + P+ R AAL AAEKR R ++ SG +RLGG S + AA AAE R C HG RG + S+SAP R D E W+C CTL N P + CEACGT + Sbjct: 82 FFPYNQILDTMLHELCHNEHGPHNTEFYKLLDEIRKECEELLAKGITGSGQGFDLPGRRLGGFTHQPPLLSLRHAALAAAEKRARHGALLPSGPKRLGGDGDIMVALSPIQAAAMAAERRLHDDLWCGSKSFEERHGVMLGKIGSSRGSSESSKDASILSDNPIQTSTSAPMQNNRMTDNIKDGETWECTTCTLINQ-PLSLMCEACGTQK 291
BLAST of mRNA_H-paniculata_contig11631.1057.1 vs. uniprot
Match: A0A6J5UIA0_PRUAR (Uncharacterized protein n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5UIA0_PRUAR) HSP 1 Score: 97.4 bits (241), Expect = 2.800e-18 Identity = 81/202 (40.10%), Postives = 103/202 (50.99%), Query Frame = 1 Query: 4 FYSYEALLHTMLHELVHMEINPHNAKFYKMLDELRVECEKLMREGITGTNMPFAGDGRSLGG--GRAPIDA-RTAALKAAEKRQRQQGIMGSG-QRLGGST--AATGSAAERAAAAAEWRQAVSTGCVITGTSGCHGRGGDKGCSSSAPGRPV----------------GGSSDREGWDCELCTLHNSDPNLIACEACGTAR 543 FY YE +L TMLHEL H E PHNA FYK+LDE+R ECE+LM +GITGT F G+ LGG + P+ + R AL AAE R R+ ++ SG +RLGG + A S + AA AAE R C + G G+ G S V G D+ W C +CTL N + + C ACGT + Sbjct: 225 FYPYEQILDTMLHELCHNEYGPHNADFYKLLDEIRRECEELMAKGITGTAQGFDLPGKRLGGFSRQPPLSSIRQTALAAAENRARRGALLPSGPRRLGGDSNIKAALSPIQAAAMAAERRLHDDLWCGSKSSEGGIEIQGNVGTSRRTEAFTVTNGISTQTSIESESGQGKIDDQAKWKCNMCTLLN-ELLALRCSACGTLK 425
BLAST of mRNA_H-paniculata_contig11631.1057.1 vs. uniprot
Match: A0A4Y1R6C5_PRUDU (Zinc ion-binding protein n=6 Tax=Prunus TaxID=3754 RepID=A0A4Y1R6C5_PRUDU) HSP 1 Score: 97.1 bits (240), Expect = 2.870e-18 Identity = 82/202 (40.59%), Postives = 106/202 (52.48%), Query Frame = 1 Query: 4 FYSYEALLHTMLHELVHMEINPHNAKFYKMLDELRVECEKLMREGITGTNMPFAGDGRSLGG--GRAPIDA-RTAALKAAEKRQRQQGIMGSG-QRLGGST--AATGSAAERAAAAAEWR---------QAVSTGCVITGTSGCHGRGG----DKGCSSSAPGRPVGGS---SDREGWDCELCTLHNSDPNLIACEACGTAR 543 FY YE +L TMLHEL H E PHNA FYK+LDE+R ECE+LM +GITGT F G+ LGG + P+ + R AL AAE R R+ ++ SG +RLGG + A S + AA AAE R +++ G I G G R G S+ G D+ W C +CTL N + + C ACGT + Sbjct: 143 FYPYEQILDTMLHELCHNEYGPHNADFYKLLDEIRRECEELMAKGITGTAQGFDLPGKRLGGFSRQPPLSSIRQTALAAAENRARRGALLPSGPRRLGGDSNIKAALSPIQAAAMAAERRLHDDLWCGSKSLEGGIEIQGNVGTSRRTEAFTVTNGISTQTSIESESGQRKIDDQAKWKCNMCTLLN-ELLALRCSACGTLK 343
BLAST of mRNA_H-paniculata_contig11631.1057.1 vs. uniprot
Match: A0A540K4W6_MALBA (WLM domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540K4W6_MALBA) HSP 1 Score: 94.0 bits (232), Expect = 5.850e-18 Identity = 78/187 (41.71%), Postives = 99/187 (52.94%), Query Frame = 1 Query: 4 FYSYEALLHTMLHELVHMEINPHNAKFYKMLDELRVECEKLMREGITGTNMPFAGDGRSLGG--GRAPIDA-RTAALKAAEKRQRQQGIMGSG-QRLGGST--AATGSAAERAAAAAEWRQAVSTGC---VITGTSGCHGRGGDK----------GCSSSAPGRPVGGSS---DREGWDCELCTLHN 498 FY YE +L TMLHEL H E PHNA FY++LDE+R ECE+L+ +GI+GT F GR LGG +AP+ + R AL AAE R R+ ++ SG +RLGG + A S + AA AAE R C G G HG G G S+ +P G D+ W C +CTL N Sbjct: 82 FYPYEQILDTMLHELCHNEHGPHNADFYRLLDEIRRECEELIAKGISGTGQGFDLPGRRLGGFSRQAPLSSIRQTALAAAETRARRGAVLPSGPKRLGGDSNIKAALSPVQAAAMAAERRLHDDLWCGSKSSEGDIGVHGNIGTSQRPQPFAFTDGVSTQTNIKPKPGQEEMDDQAKWKCSMCTLLN 268
BLAST of mRNA_H-paniculata_contig11631.1057.1 vs. uniprot
Match: T0PRL4_SAPDV (WLM domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PRL4_SAPDV) HSP 1 Score: 93.6 bits (231), Expect = 9.780e-18 Identity = 75/191 (39.27%), Postives = 99/191 (51.83%), Query Frame = 1 Query: 1 TFYSYEALLHTMLHELVHMEINPHNAKFYKMLDELRVECEKLMREG---ITGTNMPFAGDGRSLGGGRAPIDARTAALKAAEKRQRQQGIMGSGQ--RLGGSTAATGSAA------ERAAAAAEWRQAVSTGCVITGTSGCHGRGGDKGCSSSAPGRPVGGSSDR--EGWDCELCTLHNSDPNLIACEACG 534 +F +E LL TMLHELVHM+I PHNA FYK+LDEL E E LM +G ITG AG G +LGG A A+ AA AA +R R Q ++G+ RLGG +AT ++ ++A AAE R+ C G H P R +G ++ +GW C+ CT N + + C CG Sbjct: 78 SFLPFEHLLGTMLHELVHMKIGPHNAAFYKLLDELTSEMESLMAQGLIGITGAQFQNAGQGHALGGANARNVAKAAA-DAAIQRMRHQALVGANGSCRLGGDASATAASLTPAMLRQKALKAAERRRHDQLTC------GTH----------DEPSRQIGEAAPEPYDGWSCDQCTFLNDERQSV-CAMCG 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11631.1057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11631.1057.1 >prot_H-paniculata_contig11631.1057.1 ID=prot_H-paniculata_contig11631.1057.1|Name=mRNA_H-paniculata_contig11631.1057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=453bp TFYSYEALLHTMLHELVHMEINPHNAKFYKMLDELRVECEKLMREGITGTback to top mRNA from alignment at H-paniculata_contig11631:1996..7832- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11631.1057.1 ID=mRNA_H-paniculata_contig11631.1057.1|Name=mRNA_H-paniculata_contig11631.1057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5837bp|location=Sequence derived from alignment at H-paniculata_contig11631:1996..7832- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11631:1996..7832- >mRNA_H-paniculata_contig11631.1057.1 ID=mRNA_H-paniculata_contig11631.1057.1|Name=mRNA_H-paniculata_contig11631.1057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2718bp|location=Sequence derived from alignment at H-paniculata_contig11631:1996..7832- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |