mRNA_H-paniculata_contig11621.1050.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11621.1050.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 184 bits (466), Expect = 2.370e-46 Identity = 112/269 (41.64%), Postives = 166/269 (61.71%), Query Frame = 3 Query: 516 QAFAIKQVLERERDRDLLSLGELEAKASHRCFGGHRDADHPGK-GRRKVWNHMNEASLISPRFAMLAMAAEAAKVN---YKPSTILSWVREFRKLSGRLKHDDRRVHEREWILSEEDLELDMLRWLKSQKRVSCKKAHQYINHEPFAGEGVNL-RWEKYSLNIPISLSTVHMWMTKLGCKYDRAHQSYYTDSHERKDVVENRGCYISEKRLLALRQPCWKRGE-SLHKDEKASFEKLLQQEG--GDRSAEVFEFESGGTECVDFHVDFM 1298 QA++ +VL+ ER+RD+ L EL KA+ G D K + ++ +NEASL+ ++L MAA+ A + Y PSTIL W+R+FRK G + D R HE +WI+SEEDL+ +L W+ SQ R + K +YIN + +L R Y +N+P+S+ST H WM +LGC+Y+RA +S+YTD+HE+K+VVE RG YI ++R +ALRQP W R + + K E+ L+ G GD AEV++ + G +C++FHVD + Sbjct: 236 QAYSSLEVLKEERERDVKQL-ELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGG-FRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLL 502
BLAST of mRNA_H-paniculata_contig11621.1050.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE) HSP 1 Score: 180 bits (457), Expect = 8.600e-46 Identity = 110/270 (40.74%), Postives = 165/270 (61.11%), Query Frame = 3 Query: 516 QAFAIKQVLERERDRDLLSLGELEAKASHRCFGGHRDADHPGK-GRRKVWNHMNEASLISPRFAMLAMAAEAAKVN---YKPSTILSWVREFRKLSGRLKHDDRRVHEREWILSEEDLELDMLRWLKSQKRVSCKKAHQYINHEPFAGEGVN--LRWEKYSLNIPISLSTVHMWMTKLGCKYDRAHQSYYTDSHERKDVVENRGCYISEKRLLALRQPCWKRGE-SLHKDEKASFEKLLQQEG--GDRSAEVFEFESGGTECVDFHVDFM 1298 QA++ +VL+ ER+RD+ L EL KA+ G D K + ++ +NEASL+ ++L MAA+ A + Y PSTIL W+R+FRK G + D R HE +WI+SEEDL+ +L W+ SQ R + K+ +YIN + R Y +N+P+S+ST+H WM +LGC+Y+R +S+YTD+HE+K+VVE RG YI ++R +ALRQP W R + + K E+ L+ G GD AEV++ + G +C++FHVD + Sbjct: 189 QAYSSLEVLKEERERDVKQL-ELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGG-FRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKEVCKYINGPLLQDDKEEDLSRLHAYQVNLPVSMSTMHSWMIRLGCRYERGTKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLL 456
BLAST of mRNA_H-paniculata_contig11621.1050.1 vs. uniprot
Match: A0A6H5JMT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT5_9PHAE) HSP 1 Score: 173 bits (439), Expect = 3.070e-43 Identity = 108/263 (41.06%), Postives = 152/263 (57.79%), Query Frame = 3 Query: 537 VLERERDRDLLSLGELEAKASHRCFGGHRDADHPGKGRRKVWNHMNEASLISPRFAMLAMAAEAAKVN---YKPSTILSWVREFRKLSGRLKHDDRRVHEREWILSEEDLELDMLRWLKSQKRVSCKKAHQYINHEPFAGEGVNL-RWEKYSLNIPISLSTVHMWMTKLGCKYDRAHQSYYTDSHERKDVVENRGCYISEKRLLALRQPCWKRGESLHKDEKASFEKLLQQEG-----GDRSAEVFEFESGGTECVDFHVDFM 1298 VL+ ER RDL L +L +A + K + +NEAS + ++L +AA Y STIL W+R+FR G K D R VHER+WI+SEEDL+ +++ W+++QKR++ K YIN FA E +L R Y +N+P+S++T H WM LGCKY+RA +S+YTD HE+KDVV RG YI KR LALRQP W R + + + E+L + +G D AEV++ G EC++FHVD + Sbjct: 198 VLKEERKRDLRQL-QLTQQAKSLSDESYTTIPAVKAAEAKRFELLNEASRLRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGGS-KRDSRGVHERDWIMSEEDLKDELVMWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQR----DTLTPEELQRLDGIKGPAKDFCAEVYDCVVEGRECIEFHVDLL 454
BLAST of mRNA_H-paniculata_contig11621.1050.1 vs. uniprot
Match: A0A6H5JI16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI16_9PHAE) HSP 1 Score: 171 bits (433), Expect = 7.200e-43 Identity = 106/263 (40.30%), Postives = 152/263 (57.79%), Query Frame = 3 Query: 537 VLERERDRDLLSLGELEAKASHRCFGGHRDADHPGKGRRKVWNHMNEASLISPRFAMLAMAAEAAKVN---YKPSTILSWVREFRKLSGRLKHDDRRVHEREWILSEEDLELDMLRWLKSQKRVSCKKAHQYINHEPFAGEGVNL-RWEKYSLNIPISLSTVHMWMTKLGCKYDRAHQSYYTDSHERKDVVENRGCYISEKRLLALRQPCWKRGESLHKDEKASFEKLLQQEG-----GDRSAEVFEFESGGTECVDFHVDFM 1298 VL+ ER RDL L EL +A + K + +NEAS ++L +AA Y ST+L W+R+FR G K D RRVHER+WI+S+EDL+ ++++W+++QKR++ K YIN FA E +L R + +N+P+S+ T H W+ LGCKY+RA +S+YTD HE+KDVV RG YI KR LALRQP W R + + + E+L + +G D AEV++ G EC++FHVD + Sbjct: 156 VLKEERKRDLRQL-ELTQQAKSLSDESYTTIPAVKAAEAKRFELLNEASRRRHESSLLRIAARVNSAGSRVYAASTVLGWLRDFRGHGG-FKRDSRRVHERDWIMSKEDLKDELIKWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLSHQVNLPVSMVTTHSWIIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQR----DTLTPEELQRLDGIKGPAEDFCAEVYDCVVEGRECIEFHVDLL 412
BLAST of mRNA_H-paniculata_contig11621.1050.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE) HSP 1 Score: 166 bits (420), Expect = 2.610e-40 Identity = 97/225 (43.11%), Postives = 137/225 (60.89%), Query Frame = 3 Query: 654 KVWNHMNEASLISPRFAMLAMAAEAAKVN---YKPSTILSWVREFRKLSGRLKHDDRRVHEREWILSEEDLELDMLRWLKSQKRVSCKKAHQYINHEPFAGEGVNL-RWEKYSLNIPISLSTVHMWMTKLGCKYDRAHQSYYTDSHERKDVVENRGCYISEKRLLALRQPCWKRGESLHKDEKASFEKLLQQEGG------DRSAEVFEFESGGTECVDFHVDFM 1298 K ++ +NEAS + ++L +AA Y STIL W+R+FR G K D R VHER+WI+SEED + ++++W+++QKR++ K YIN FA + +L R Y +N+P+S++T H WM LGCKY+RA +S+YTD HE+KDVV RG YI KR LAL QP W R + +D K LQ+ G D AEV++ G EC++FHVD + Sbjct: 351 KRFDLLNEASRLRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGG-FKRDSRGVHERDWIMSEEDPKDELIKWMRTQKRLTVKDVQNYINQWLFANQIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALWQPLWVR---VQRDTLTP--KELQRLDGIKGPAEDFCAEVYDCVVEGRECIEFHVDLL 569
BLAST of mRNA_H-paniculata_contig11621.1050.1 vs. uniprot
Match: A0A6H5JRV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV8_9PHAE) HSP 1 Score: 160 bits (404), Expect = 8.670e-39 Identity = 94/213 (44.13%), Postives = 127/213 (59.62%), Query Frame = 3 Query: 537 VLERERDRDLLSLGELEAKASHRCFGGHRDADHPGKGRRKVWNHMNEASLISPRFAMLAMAAEAAKVN---YKPSTILSWVREFRKLSGRLKHDDRRVHEREWILSEEDLELDMLRWLKSQKRVSCKKAHQYINHEPFAGEGVNL-RWEKYSLNIPISLSTVHMWMTKLGCKYDRAHQSYYTDSHERKDVVENRGCYISEKRLLALRQPCWKR 1163 VL+ ER RDL L +L +A + K + +NEAS + ++L +AA Y STIL W+R+FR G K D R VHER+WI+SEEDL+ ++++W++ QKR++ K YIN FA E +L R Y +N+P+S++T H WM LGCKY+RA +S+YTD HE+KDVV RG YI KR LALRQP W R Sbjct: 58 VLKEERKRDLRQL-QLTQQAKSLSDESYTTIPAVKAAEAKRFELLNEASRLRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGG-FKLDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVR 268
BLAST of mRNA_H-paniculata_contig11621.1050.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE) HSP 1 Score: 155 bits (393), Expect = 5.830e-37 Identity = 99/262 (37.79%), Postives = 143/262 (54.58%), Query Frame = 3 Query: 537 VLERERDRDLLSLGELEAKASHRCFGGHRDADHPGKGRRKVWNHMNEASLISPRFAMLAMAAEAAKVN---YKPSTILSWVREFRKLSGRLKHDDRRVHEREWILSEEDLELDMLRWLKSQKRVSCKKAHQYINHEPFAGEGVNLRWEKYSLNIPISLSTVHMWMTKLGCKYDRAHQSYYTDSHERKDVVENRGCYISEKRLLALRQPCWKRGESLHKDEKASFEKLLQQEG-----GDRSAEVFEFESGGTECVDFHVDFM 1298 VL+ ER RDL L +L +A + K + +NEAS + ++L +AA Y STIL W+R+FR G K D R VHER+WI+SEEDL+ ++++W+++QKR++ K +N+P+S++T H WM LGCKY+RA +S+YTD HE+KDVV RG YI KR LALRQP W R + + + E+L + +G D AEV++ G EC++FHVD + Sbjct: 327 VLKEERKRDLRQL-QLTQQAKSLSDESYTTIPAVKAAEAKRFELLNEASRLRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGG-FKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTAK-----------------------DVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQR----DTLTPEELQRLDGIKGPAKDFCAEVYDCVVEGRECIEFHVDLL 559
BLAST of mRNA_H-paniculata_contig11621.1050.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE) HSP 1 Score: 149 bits (375), Expect = 1.920e-34 Identity = 91/209 (43.54%), Postives = 122/209 (58.37%), Query Frame = 3 Query: 537 VLERERDRDLLSLGELEAKASHRCFGGHRDADHPGKGRRKVWNHMNEASLISPRFAMLAMAAEAAKVN---YKPSTILSWVREFRKLSGRLKHDDRRVHEREWILSEEDLELDMLRWLKSQKRVSCKKAHQYINHEPFAGEGVNL-RWEKYSLNIPISLSTVHMWMTKLGCKYDRAHQSYYTDSHERKDVVENRGCYISEKRLLALRQP 1151 VL+ ER RDL L EL +A + K +NEA ++ +AA Y STIL W+R+FR G K D R VHER+WI+SEEDL+ ++++W+++QKR++ K YIN FA E +L R Y +N+P+S++T H WM LGCKY+RA +S+YTD HE+KDVV RG YI KR LALRQP Sbjct: 136 VLKVERKRDLRQL-ELAQQAKSLSDESYTTIPAVKAAEAKRLELLNEALRRRHESSLWRIAARVNSAGLRVYAASTILGWLRDFRGHGG-FKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTVKDVQNYINQWLFAYEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQP 342
BLAST of mRNA_H-paniculata_contig11621.1050.1 vs. uniprot
Match: A0A6H5L6Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y6_9PHAE) HSP 1 Score: 136 bits (343), Expect = 7.940e-31 Identity = 95/265 (35.85%), Postives = 137/265 (51.70%), Query Frame = 3 Query: 516 QAFAIKQVLERERDRDLLSLGELEAKASHRCFGGHRDADHPGKGRRKVWNHMNEASLISPRFAMLAMAAEAAKVN---YKPSTILSWVREFRKLSGRLKHDDRRVHEREWILSEEDLELDMLRWLKSQKRVSCKKAHQYINHEPFAGEGVNL-RWEKYSLNIPISLSTVHMWMTKLGCKYDRAHQSYYTDSHERKDVVENRGCYISEKRLLALRQPCWKRGESLHKDEKASFEKLLQQEGGDRSAEVFEFESGGTECVDFHVDFM 1298 QA++ +VL+ ERD D+ L E KA+ G D +NEASL+ +L +AA+ A + Y PSTIL W+R+FRK G + D R HE +WI+SEEDL+ +L W+ Q RV+ K +YIN + +L R Y +N+P+S+ST H WM +LGCKY+RA +S+YTDSHE+K+ + L R P EGG AEV++ + G +C+ FH+D + Sbjct: 161 QAYSSLEVLKEERDSDVKQL-ECTRKANGVLSGCKFDL-------------LNEASLVRHEAPLLRIAAKVAGPSPQAYAPSTILRWLRDFRKEGG-FRRDARGAHETDWIMSEEDLKGKLLAWMIPQPRVTVKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHPWMIRLGCKYERATKSFYTDSHEKKEEE------VDRLESLKARGP----------------------EGG-FYAEVYDCKIDGQDCIAFHLDLL 381
BLAST of mRNA_H-paniculata_contig11621.1050.1 vs. uniprot
Match: A0A6H5JUI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI4_9PHAE) HSP 1 Score: 136 bits (343), Expect = 1.700e-30 Identity = 97/263 (36.88%), Postives = 137/263 (52.09%), Query Frame = 3 Query: 537 VLERERDRDLLSLGELEAKASHRCFGGHRDADHPGKGRRKVWNHMNEASLISPRFAMLAMAAEAAKVN---YKPSTILSWVREFRKLSGRLKHDDRRVHEREWILSEEDLELDMLRWLKSQKRVSCKKAHQYINHEPFAGEGVNL-RWEKYSLNIPISLSTVHMWMTKLGCKYDRAHQSYYTDSHERKDVVENRGCYISEKRLLALRQPCWKRGESLHKDEKASFEKLLQQEG-----GDRSAEVFEFESGGTECVDFHVDFM 1298 VL+ ER RDL L +L +A + K + + EAS ++L +AA Y STIL W+R+FR G K D R VHER+WI+SEEDL+ ++++W++ QKR++ K YIN FA E +L R Y +N+P+S++T H W+ LGCK KDVV RG YI KR LALRQP W R + + + E+L + +G D AEV++ G EC++FHVD + Sbjct: 271 VLKEERKRDLRQL-QLTQQAKSLSDESYTTIPAVKAAEAKRFEVLIEASRRRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGG-FKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWIIALGCK---------------KDVVVCRGKYIDVKRKLALRQPLWVRVQR----DTLTPEELQRLDGIKGPAKDFCAEVYDCVVEGRECIEFHVDLL 512 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11621.1050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11621.1050.1 >prot_H-paniculata_contig11621.1050.1 ID=prot_H-paniculata_contig11621.1050.1|Name=mRNA_H-paniculata_contig11621.1050.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=301bp MMPRKRRPTHALRARSQRRCRRRRSARLRKRLRIQAFAIKQVLERERDRDback to top mRNA from alignment at H-paniculata_contig11621:2169..3954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11621.1050.1 ID=mRNA_H-paniculata_contig11621.1050.1|Name=mRNA_H-paniculata_contig11621.1050.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1786bp|location=Sequence derived from alignment at H-paniculata_contig11621:2169..3954+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11621:2169..3954+ >mRNA_H-paniculata_contig11621.1050.1 ID=mRNA_H-paniculata_contig11621.1050.1|Name=mRNA_H-paniculata_contig11621.1050.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1806bp|location=Sequence derived from alignment at H-paniculata_contig11621:2169..3954+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |