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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1568 |
| Cds size | 558 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11611.1041.1 >prot_H-paniculata_contig11611.1041.1 ID=prot_H-paniculata_contig11611.1041.1|Name=mRNA_H-paniculata_contig11611.1041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=186bp
MGMNSTVILLDAGPFKLEASCKTIVVQNTYSSWYSSYYPSSSYDFGPSDD
YSYYYEDAYTWDPNGNYSSSFLALDLTYTAPEADYVYGPPNWWYHHPNET
MLLGSWEAGESRTSTIFRGYTGSWGDDFTLQSLSGNYIGVDGGDTIGIHK
EYTTGIPGGMEFPAGIECMVAGFLTYHIPAIHDAA* back to topmRNA from alignment at H-paniculata_contig11611:4648..7381+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig11611.1041.1 ID=mRNA_H-paniculata_contig11611.1041.1|Name=mRNA_H-paniculata_contig11611.1041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2734bp|location=Sequence derived from alignment at H-paniculata_contig11611:4648..7381+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGACATTTTCCACCGTGCGGTTTGATCGTCATATTCCGCTCGACAGACAT
TCACTTGGAAAGATTGAGATGAGCTTCGACCTACAGTGAGATCTGACTCC
CTGAGTGACAAATGTCTGTCAGCACTACAATCCAGTCCAATACGTGGCTA
CAAAGGGCAGAGCGCTTTTAAAATATAATTACCCTGCCCTCCCCCCCCCG
CCCCCACCCGTTCTCCCGGGCTGTATGCGACCCTCCGTTTTGACTTATCG
GGTGTAACGATGACAAAAAAACGCAGCAACTCTACTTCTCCGAGACCATG
GGCATGAACAGCACCGTGATCCTGCTCGACGCTGGGCCCTTCAAGCTGGA
GGCCTCCTGCAAGACCATTGTCGTACAGAACACCTACTCGTCGTGGTACA
GCTCTTACTATCCGTCTTCTTCCTACGACTTCGGACCCTCGGATGACTAC
TCGTACTACTACGAGGACGCCTATACCTGGGATCCCAATGGGAACTACTC
CTCGAGCTTCGTAAGTATCAACATGTTACCAATTGGGAGAGGAGAGTGGG
TGGGTGAGGGTTGAAAGAGATGATAAATACACGTCCCGAATGATACTTTC
GTAATGCCGATGTGTCTGCTGGTTGGATACCGCCGATGAAGCTTCTTCAA
GGGCTTAGTTGTTGTAGCCCCCTGGCGAGACAAGTGGATGGATTATGTAG
TGCAATACGCGCCCAATATTTGGCTACGTGGTTGGCATAGTCAGGGTTCA
ACGCAGTCGTTCTACATACCTCTGATGTGGTGATTCGCTGCGGTGACTGA
GAGACCGTCAGTACACCGACCGTTCCTGAACTTCTTTGGAAGAACTGTTG
CCTCATTATCTTGTTAGGACTTGAAGCGTATTTAACGATGTTCACGGGTG
GCTATCATGACATACATCATGCCGGTCTCTACAAGGTCTGGTTCCTGCAG
TATGCGGCTTATACGCCTTTGTGCGCACAAAAACAATGAAGTGTTACCGC
CTGGAGAGCCCAATTCGCTGACTGTGCTCCCCTGTTTAATCTCCCACCGA
TTCTGTTTACTTGCCATTTTCTGTTGACCGAATTTGCAGCTGGCGTTGGA
TCTGACCTACACTGCACCCGAAGCTGACTATGTGTATGGCCCCCCCAATT
GGTGTGAGTGCCCCTTAATAGTGGGTGTAGAGCTGAATTCTTCCGTTTAG
TAGTGGAATTGCGGTGGCGGTTATAAGTAGACGGTTGATCTAATGCATTG
TGCATCGCATCGGATTTTTCATGTGCAGTAGCTTTCTCCCGGACCATAGA
ACAGTTGAAAAAACAAAGCACTAGGCCGTTAGCCCCACCTGTCAGTAGGT
ACAGCCTATCCTTGTCGAGGATGAGTATAGTGAAAAACAACCGCCACCGT
AAAGCATGTCTGTTGCGCGCCTTGAATCTGCTAGTAGCTAGTCTTTCTCG
AGGTTGATCTTCCGGTGCCCGTCAATAGTTTGGAACAATTTTTGTGGTCA
ATTTCTGCCGTCCTTTCCATTCTATCTGAAACTACAGGGTACCACCACCC
TAACGAGACTATGCTGCTCGGGTCTTGGGAGGCGGGAGAAAGCAGAACAT
CCACGATCTTCCGCGGCTACACCGGTAGCTGGGGCGATGACTTCACGCTT
CAGAGTTTGTCCGGGCGAGTCTTTTTGCTTTGTCTGTGCTTGAGATTCCT
AAGCTTCCATGATGGTTATAGAGGTGTCCTTGAAAGTCCCCCTTGCCTCC
GTACATTAGTAGGTGGTGATTATTATAATGAGTGAGCGGAAGGCGTCAGG
AATCTGTATAAACACCTGTGAGGCCTCGTTGTTGACATTCGCGCATTTTC
TGTTCGTTTTATGGCAGGAACTACATCGGAGTGGACGGGGGTGACACTAT
CGGTATCCACAAGGAGTACACCACAGGGATCCCTGGGGGCATGGAGTTCC
CAGCAGGCATCGAGTGCATGGTTGCTGGTTTCTTGACCTACCACATCCCC
GCAATCCACGACGCCGCATGAATCGTACGTAACCTTTTCTCCTGAAGGGA
TGATGCAAAGTCTCGTCGGTCATCCGTTTTGTTCTCGGGTAGACATGCTT
ATTTTCCTCGCGGTCGGTGATGTCTATCATTCCTGTTTTGGGAGGTTCGG
TCATTAAAATAAGTAGTTTCGATTTCCGTGTGACTTATTCGTGTGTTGTA
TTTTTGTGATGTGTGCATTCCCTTTGTGCAGTAGACGCTCTTGTAGATAG
CTTGTGACAGTGACAGAGATGAGGAAGGGATTGAATTTCGAAATCTGATG
CATTCGGGTGATGTGGTACGTACTTGGAATATATTAGTTTGAGCCAACCA
TCTAGCCACAGCTAGGTGCGACCCAAGTCAGAAACGACTTGCCATCAGCG
TCACCATATAGTTGCCCGGGTTGGAGGTGCCCACTACGTTGGTACATTTC
GCAAAATGGTCCATATCCAGTTGTTTGGTTCGTGCAGGTAAGCACGTGAA
CTCTCTCAACTATGCAGTAACTACTAACGGCTATTAGGAAGACATGCAGA
CCCGTCAGCAGATCACGTAAAAGATTTTTGCCTCTTAGAGGGGGAAGGAG
TAGTTCAGCGGGCTTGGTTTTACAGATTTTGTTGTTTGTAGAATGTTGGA
TTTGTGTGTTCCCTATACGACGGTCCGTTGCTGGATAACCGAAATACCAT
GGATAGTACCAAGAAATTTATCGGAATTCTCCGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig11611:4648..7381+ >mRNA_H-paniculata_contig11611.1041.1 ID=mRNA_H-paniculata_contig11611.1041.1|Name=mRNA_H-paniculata_contig11611.1041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1116bp|location=Sequence derived from alignment at H-paniculata_contig11611:4648..7381+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCATGAACAGCACCGTGATCCTGCTCGACGCTGGGCCCTTCAAGCT
GGAGGCCTCCTGCAAGACCATTGTCGTACAGAACACCTACTCGTCGTGGT
ACAGCTCTTACTATCCGTCTTCTTCCTACGACTTCGGACCCTCGGATGAC
TACTCGTACTACTACGAGGACGCCTATACCTGGGATCCCAATGGGAACTA
CTCCTCGAGCTTCATGGGCATGAACAGCACCGTGATCCTGCTCGACGCTG
GGCCCTTCAAGCTGGAGGCCTCCTGCAAGACCATTGTCGTACAGAACACC
TACTCGTCGTGGTACAGCTCTTACTATCCGTCTTCTTCCTACGACTTCGG
ACCCTCGGATGACTACTCGTACTACTACGAGGACGCCTATACCTGGGATC
CCAATGGGAACTACTCCTCGAGCTTCCTGGCGTTGGATCTGACCTACACT
GCACCCGAAGCTGACTATGTGTATGGCCCCCCCAATTGGTCTGGCGTTGG
ATCTGACCTACACTGCACCCGAAGCTGACTATGTGTATGGCCCCCCCAAT
TGGTGGTACCACCACCCTAACGAGACTATGCTGCTCGGGTCTTGGGAGGC
GGGAGAAAGCAGAACATCCACGATCTTCCGCGGCTACACCGGTAGCTGGG
GCGATGACTTCACGCTTCAGAGTTTGTCCGGGGTACCACCACCCTAACGA
GACTATGCTGCTCGGGTCTTGGGAGGCGGGAGAAAGCAGAACATCCACGA
TCTTCCGCGGCTACACCGGTAGCTGGGGCGATGACTTCACGCTTCAGAGT
TTGTCCGGGAACTACATCGGAGTGGACGGGGGTGACACTATCGGTATCCA
CAAGGAGTACACCACAGGGATCCCTGGGGGCATGGAGTTCCCAGCAGGCA
TCGAGTGCATGGTTGCTGGTTTCTTGACCTACCACATCCCCGCAATCCAC
GACGCCGCATGAGAACTACATCGGAGTGGACGGGGGTGACACTATCGGTA
TCCACAAGGAGTACACCACAGGGATCCCTGGGGGCATGGAGTTCCCAGCA
GGCATCGAGTGCATGGTTGCTGGTTTCTTGACCTACCACATCCCCGCAAT
CCACGACGCCGCATGA back to top
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