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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Model size | 580 |
| Cds size | 504 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11594.1025.1 >prot_H-paniculata_contig11594.1025.1 ID=prot_H-paniculata_contig11594.1025.1|Name=mRNA_H-paniculata_contig11594.1025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
MQQTAMAGSGAAALILSSTLFVQAVQQHSRGTLFLSNRGWPATGEPPHLS
VAAAAAAAAATAVLTAGSRKDSARTWESVLFSGKNTVSPHGQSCRSRRHA
SLSLSPSSSVILSRLSGGASGNSGGGRGLSASSGKPRGGRGVAPMAAVGK
RRPAPAHDDSLDDDDYDD back to topmRNA from alignment at H-paniculata_contig11594:2075..5397- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig11594.1025.1 ID=mRNA_H-paniculata_contig11594.1025.1|Name=mRNA_H-paniculata_contig11594.1025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3323bp|location=Sequence derived from alignment at H-paniculata_contig11594:2075..5397- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTATGCTCTTCTTTTACTGGGATGTTGATAGCAAGGATGCGATGACCGC
GGGCCTGGGAGTGGTATTTTAGTTGCATGCAGCAAACGGCGATGGCCGGA
TCGGGAGCGGCAGCGCTGATACTATCGTCAACGTTGTTCGTACAAGCAGT
GCAGCAACACTCAAGAGGAACATTATTTCTGTCAAACAGAGGTGAGTCCG
TCCTCAAAATGTAGGAATCAGCCATACGTCGAGTTGCGCTTTGCCCTGGT
AAGAGGCTAACTGGAACCCTCCGTTGCCCCAGCAAGTCGAGGCGAGCAAG
TGACGATGAATGCAGACGCCCCAATTGAGTGCTCGAATGATGATGGGATT
GGTCAAACCTCTGATCACTTGCGGCATGTGTTGCCCATGATTTAATAACA
CCTGATGCAAAGATTCTACATACATTACACGTGTTCGGCTGCCGGAGAAG
CTCATCTACAGTTCCTGCTTCTGCTGCTGCTTCTGCTGCTGCTTCTGCTT
CTGCTGCTGCTGTTTTTGTTTTTGTTGTTGCTGCTGCTGCTCTGTGTACT
TCATGTCCCCTTTATGGGGTAACCCTCGAACCACAGTGTAATCCAGTATT
TTTTTCGGTGCTTATACACCCATGAATCGCTGCTCCCCTCCCCTGTTAAG
AAAAGCCGCTGGTACATTGGTCGAAAATTGCACACACGTTGTGGTGTTTC
TCGTTTTACCTGCAACTCGTGTTCTGCCACTTTCACAGTACTACTTGCTA
CTGCATTCCATGTGCGGTGTACGAGATGGCAGGAAGTAGCGGTATGACAG
CTCTGCTTTAGTCCAACATTAGGCCGCTGTCCGATGTCGCCCACCCTCAC
CATACATGCGACGCTTGTTTCTTTCTCTATGTGCGAGCTCCTTCCTCTTC
TGGTGAAATGTCAGAAACGAGGAACCGTGAAAGTAATATACTCCTCCCTG
TGCGTATCGTTTTACTTCTAAGTAGCTCCACAAGTGGGTGTGCTTGGAAC
TTCATGCGCCCACCTAAACCTCCCCGTCATTCCGAAAACAAAAACCAACC
TTCTTACAAACATAACAAATGACCACCAATCAGCCAACTTATATGGTACT
AGTAGTGGAGCGATATCTACGCCAATGGACTCGCTGCGCCTGCATGAATA
TTTGTTTTTCAGGGTTTACTTCAGTACAAAATTTAATGTATGTTCCAAAA
TGACGACGACCAACCGTCACCATACCAACAAGGATAACGCGACAAGAATT
TATGGAAGAAGACACAATGCATATATATATATATATATATATGTATTTAT
ATGAGCAGGACATGATTAACACCTGGTATCTGTAAAGCCATCGCAACATC
GGTAGTTAACCCTAACTATTATAGACTGGGTCGACCAAGAAACTCATTTT
GTTTCGGACGATCTTATCTTCTCAACTACTGCGATTCATATCGAAAAGAA
AGAATTATTGCAATTGGCCAATCAACGCGCATGTGCAGAGCCACGTGCCT
AGCCCATCGAAGTTGGTTCTACAAATTTGAGGTTGGCTGCCCAACCAGTG
TGTAAGGGGTTGGTGTTGAAACCGTTTCTTTTTGCAGCGCAATTAGAATC
ATGCGGCTTTAAAGTGCCTAGATCAGGGACACCCCGAGCCTATGCCGTGC
GACATTGCTAGGAGCGCACCAGTAGGTCAGCAGTGGCAGAGGGTGTCAGT
CCCTACGATTGTGCACGTCAAGGCCAACTTTCTATTCATGTGGGTGTTTC
GTTTGTTCCATAATTTAACAAAAAACAAAAAACAAAAAATGACCCAGCCG
GGTGTATCGACGAGTGTGTTGCAAATCACGTGTCAAAATTTCAGGACAGC
ATTCGATAAATTGAGCTGAGAAGCCTGATTCTGTCGCTTTGACTGTGTGT
TGGACGGCCCAGCCTGTAGTGAATCGCCAACCTTTCGTGTAACTGATGCA
TGCCAATCAGATAGACCAAAAACACTAGAGACAAGCAACAGGGCTTGTAA
GAGCTCATTTTGTCGCGAACACGATTATATATAGGGGTGATTGTCAACCG
TTTTAAAGCTGGTTGCCGCCTAATCCCTAGCTAATCCATCGATACCTCAA
AAACGGGTGGAAACGACGCCAATGACATGATTGATCACCGGGATGGTCAG
CCACCGCTCTTCAGGCAGATAGTTCAGCACAGTCGGCAAACGCAGCACAG
ACAAGTGGTTGGCAGTAGTTCTGCCCAAAACGACGACTGCAGCGCTATAA
ATCTAGTGCCAGAAACCTTTTTGTGTTCCGAACGGAACTTACGGAGTCCA
ACAAGCGAGCGGAACCTCCTCCCCGAAATAGGCCGCAAGGTACAGTTGGG
GTTAGCCTTCCCCTTCCCCAAACCCGAAATGTATTCTGCAAGAACCTGTT
TGAGGGATTCGTGTTTTTCATGATTGTGACTACTTGAATTGGTTCGAAAT
CGTATCCACGATCCCACCTACCCACTCACCCCAAAGACGGCTTGACAGCA
AACGTCTGCCATCTTGGGGCGGGTTAGCGTTATACGAGGAACCAATCGCG
TGTGCTTCACGCTCCTCTTGCTGCTCTCGTCTACATCCATACCCCCATCC
CTGTCTCTCGCGCCGTCTTCTCAAGAACCCGTGCTCAACGGTCGAGCAAC
TGCAGCATGTCAAAGACGAACGATCGTCCCTTTCTGATTTTTTTTTTTGC
TGACAAGAAGTACATGTAATGCAGATCAACGAAGTCAGTTGCGTAATCTC
AACACGAGCACAATGGAGTTATGATATGAGGTTCAGAGTTAGTTACACTG
GATGTTGCAGGATTAACCCCCCCCCCCCCCCCTCCCTTTCCCCCCTTCCC
TCTGTCCCTCCCTCCCACTCCCTGACTGGTTCCCTCGCCATTCACACTCT
TACTCCCCTGTCCTTTCGGTCGACCTTTCACAAGGATGGCCAGCGACAGG
AGAACCCCCGCATCTATCAGTGGCGGCCGCTGCCGCCGCCGCCGCCGCCA
CCGCTGTCCTCACCGCGGGATCGAGAAAGGACTCAGCTCGCACGTGGGAA
TCTGTTCTCTTCTCGGGCAAAAATACCGTTAGTCCTCATGGTCAGAGTTG
TAGGAGCAGGCGGCATGCGTCGTTGTCGTTGTCGCCGTCGTCGTCGGTCA
TCTTAAGCCGGCTTTCCGGCGGCGCTAGCGGCAACTCTGGCGGCGGTCGT
GGGCTTTCGGCTTCTTCAGGAAAACCTCGCGGGGGGCGTGGCGTGGCACC
CATGGCGGCGGTGGGGAAGCGACGGCCGGCACCGGCGCACGATGATAGTT
TGGATGATGACGATTACGACGAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig11594:2075..5397- >mRNA_H-paniculata_contig11594.1025.1 ID=mRNA_H-paniculata_contig11594.1025.1|Name=mRNA_H-paniculata_contig11594.1025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at H-paniculata_contig11594:2075..5397- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGCAAACGGCGATGGCCGGATCGGGAGCGGCAGCGCTGATACTATC
GTCAACGTTGTTCGTACAAGCAGTGCAGCAACACTCAAGAGGAACATTAT
TTCTGTCAAACAGAGATGCAGCAAACGGCGATGGCCGGATCGGGAGCGGC
AGCGCTGATACTATCGTCAACGTTGTTCGTACAAGCAGTGCAGCAACACT
CAAGAGGAACATTATTTCTGTCAAACAGAGGATGGCCAGCGACAGGAGAA
CCCCCGCATCTATCAGTGGCGGCCGCTGCCGCCGCCGCCGCCGCCACCGC
TGTCCTCACCGCGGGATCGAGAAAGGACTCAGCTCGCACGTGGGAATCTG
TTCTCTTCTCGGGCAAAAATACCGTTAGTCCTCATGGTCAGAGTTGTAGG
AGCAGGCGGCATGCGTCGTTGTCGTTGTCGCCGTCGTCGTCGGTCATCTT
AAGCCGGCTTTCCGGCGGCGCTAGCGGCAACTCTGGCGGCGGTCGTGGGC
TTTCGGCTTCTTCAGGAAAACCTCGCGGGGGGCGTGGCGTGGCACCCATG
GCGGCGGTGGGGAAGCGACGGCCGGCACCGGCGCACGATGATAGTTTGGA
TGATGACGATTACGACGACGATGGCCAGCGACAGGAGAACCCCCGCATCT
ATCAGTGGCGGCCGCTGCCGCCGCCGCCGCCGCCACCGCTGTCCTCACCG
CGGGATCGAGAAAGGACTCAGCTCGCACGTGGGAATCTGTTCTCTTCTCG
GGCAAAAATACCGTTAGTCCTCATGGTCAGAGTTGTAGGAGCAGGCGGCA
TGCGTCGTTGTCGTTGTCGCCGTCGTCGTCGGTCATCTTAAGCCGGCTTT
CCGGCGGCGCTAGCGGCAACTCTGGCGGCGGTCGTGGGCTTTCGGCTTCT
TCAGGAAAACCTCGCGGGGGGCGTGGCGTGGCACCCATGGCGGCGGTGGG
GAAGCGACGGCCGGCACCGGCGCACGATGATAGTTTGGATGATGACGATT
ACGACGAC back to top
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