mRNA_H-paniculata_contig11593.1024.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11593.1024.1 vs. uniprot
Match: J9JQH8_ACYPI (GB1/RHD3-type G domain-containing protein n=9 Tax=Aphidinae TaxID=133076 RepID=J9JQH8_ACYPI) HSP 1 Score: 53.9 bits (128), Expect = 4.650e-7 Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 1 Query: 16 LSSCQIFNVKNQIQADNLENLAMFLEYGRRGSEDS----FGHLEFLVRDW 153 LSS QI+N+K IQ D+L++L +F EYGR EDS F L+FLVRDW Sbjct: 156 LSSIQIYNLKFNIQEDDLQHLQLFTEYGRLALEDSGTKPFQKLQFLVRDW 205
BLAST of mRNA_H-paniculata_contig11593.1024.1 vs. uniprot
Match: A0A2S2P5Y3_SCHGA (Atlastin (Fragment) n=2 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2P5Y3_SCHGA) HSP 1 Score: 52.8 bits (125), Expect = 1.180e-6 Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 1 Query: 16 LSSCQIFNVKNQIQADNLENLAMFLEYGRRGSEDS----FGHLEFLVRDW 153 LSS QI+N+K IQ D+L++L +F EYGR ED+ F L+FLVRDW Sbjct: 156 LSSIQIYNLKFNIQEDDLQHLQLFTEYGRLALEDTGTKPFQKLQFLVRDW 205
BLAST of mRNA_H-paniculata_contig11593.1024.1 vs. uniprot
Match: A0A814EGK2_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814EGK2_9BILA) HSP 1 Score: 48.9 bits (115), Expect = 2.710e-5 Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 1 Query: 10 LKLSSCQIFNVKNQIQADNLENLAMFLEYGRRGSEDS----FGHLEFLVRDW 153 L +SS QI+N+ IQ D+L+NL +F +YGR E + F L FLVRDW Sbjct: 146 LMISSMQIYNISQNIQEDDLQNLQLFSDYGRLALESTSMTAFQTLIFLVRDW 197
BLAST of mRNA_H-paniculata_contig11593.1024.1 vs. uniprot
Match: E4WQQ8_OIKDI (GB1/RHD3-type G domain-containing protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4WQQ8_OIKDI) HSP 1 Score: 48.9 bits (115), Expect = 2.730e-5 Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 1 Query: 16 LSSCQIFNVKNQIQADNLENLAMFLEYGRRG------SEDSFGHLEFLVRDW 153 LSS QI+NV+ +Q DNL++L +F E+GR+ F +L FLVRDW Sbjct: 156 LSSIQIYNVRGNLQTDNLQHLQLFTEFGRQAIAQDVSDSQPFQNLLFLVRDW 207
BLAST of mRNA_H-paniculata_contig11593.1024.1 vs. uniprot
Match: A0A0L7LEK3_9NEOP (Atlastin-1 n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7LEK3_9NEOP) HSP 1 Score: 48.5 bits (114), Expect = 3.750e-5 Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 1 Query: 16 LSSCQIFNVKNQIQADNLENLAMFLEYG---RRGSEDSFGHLEFLVRDW 153 LSS QI+N+K+ I+ D+L+NL +F +YG + + +F LEFL+RDW Sbjct: 147 LSSTQIYNLKDNIKEDDLQNLQLFTDYGALMKNQTGKAFQVLEFLIRDW 195
BLAST of mRNA_H-paniculata_contig11593.1024.1 vs. uniprot
Match: T1GJE2_MEGSC (GB1/RHD3-type G domain-containing protein n=1 Tax=Megaselia scalaris TaxID=36166 RepID=T1GJE2_MEGSC) HSP 1 Score: 48.1 bits (113), Expect = 5.030e-5 Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 1 Query: 16 LSSCQIFNVKNQIQADNLENLAMFLEYGRRGSEDS----FGHLEFLVRDW 153 LSS QI+N+ IQ D+ +NL +F EYGR + S F L FLVRDW Sbjct: 89 LSSVQIYNLSENIQEDDFQNLQLFTEYGRLALKKSIHKPFQELVFLVRDW 138
BLAST of mRNA_H-paniculata_contig11593.1024.1 vs. uniprot
Match: A0A4X2KCU2_VOMUR (Atlastin GTPase 3 n=5 Tax=Diprotodontia TaxID=38609 RepID=A0A4X2KCU2_VOMUR) HSP 1 Score: 47.8 bits (112), Expect = 7.010e-5 Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 1 Query: 16 LSSCQIFNVKNQIQADNLENLAMFLEYGRRG----SEDSFGHLEFLVRDW 153 +SS QIFN+ IQ D+L+ L +F EYGR S+ F L FLVRDW Sbjct: 170 MSSVQIFNLSQNIQEDDLQQLQLFTEYGRLAMDEISQKPFQMLMFLVRDW 219
BLAST of mRNA_H-paniculata_contig11593.1024.1 vs. uniprot
Match: A0A6G0I2V8_LARCR (Atlastin-3 n=2 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0I2V8_LARCR) HSP 1 Score: 47.8 bits (112), Expect = 7.030e-5 Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 1 Query: 19 SSCQIFNVKNQIQADNLENLAMFLEYGRRGSEDSF----GHLEFLVRDW 153 SS QI+N+ IQ D+L+ L +F EYGR ++SF +L FL+RDW Sbjct: 405 SSIQIYNLSQNIQEDDLQQLQLFTEYGRLAMDESFLKPFQNLMFLIRDW 453
BLAST of mRNA_H-paniculata_contig11593.1024.1 vs. uniprot
Match: A0A4V6ANC8_COLLU (Atlastin-3 n=1 Tax=Collichthys lucidus TaxID=240159 RepID=A0A4V6ANC8_COLLU) HSP 1 Score: 47.8 bits (112), Expect = 7.050e-5 Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 1 Query: 19 SSCQIFNVKNQIQADNLENLAMFLEYGRRGSEDSF----GHLEFLVRDW 153 SS QI+N+ IQ D+L+ L +F EYGR ++SF +L FL+RDW Sbjct: 654 SSIQIYNLSQNIQEDDLQQLQLFTEYGRLAMDESFLKPFQNLMFLIRDW 702 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11593.1024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11593.1024.1 >prot_H-paniculata_contig11593.1024.1 ID=prot_H-paniculata_contig11593.1024.1|Name=mRNA_H-paniculata_contig11593.1024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp ACCLKLSSCQIFNVKNQIQADNLENLAMFLEYGRRGSEDSFGHLEFLVRDback to top mRNA from alignment at H-paniculata_contig11593:7352..7504+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11593.1024.1 ID=mRNA_H-paniculata_contig11593.1024.1|Name=mRNA_H-paniculata_contig11593.1024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=153bp|location=Sequence derived from alignment at H-paniculata_contig11593:7352..7504+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11593:7352..7504+ >mRNA_H-paniculata_contig11593.1024.1 ID=mRNA_H-paniculata_contig11593.1024.1|Name=mRNA_H-paniculata_contig11593.1024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=306bp|location=Sequence derived from alignment at H-paniculata_contig11593:7352..7504+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |