mRNA_H-paniculata_contig1159.1020.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1159.1020.1 vs. uniprot
Match: A0A6H5K3N3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3N3_9PHAE) HSP 1 Score: 405 bits (1040), Expect = 3.040e-131 Identity = 220/351 (62.68%), Postives = 268/351 (76.35%), Query Frame = 2 Query: 416 SPYAQPSNRPPPYRVRVYNEELYRQLILHQRQDEPPRGLSKPSSPSGSYGRSTKSKPSHPSLQQRSESKIKAGEEGKRKRREEQYRQQAAQQHVLQERLVRDKRLEDAAKMESIFFKLSGEVAEGHKFVDELDRVLGIADEAERSKKLKQFQEWNTHVHDLIQGRIDTALEQITSKEINERRRADLQKFLTATNTKVAIFRDIIIESEYDPLEPNRRSIKARVTQLCDPCSRVLDKRVEENALLSAGEGVSGGTPLAREILDVELWEAQRIKDTPHGFFAKMMNRENNKSKTGCKTATSKTYQSSLKMDDYNIDRGRDIVTKEFPKGKKTYMAGDEYAPLTSDSQMIIGMG 1468 SPYAQPSNRPP +RVRVYN+ L++ L+ D+ G + +SP S GRS KS+PS P + RSE+ +KAG K+KRRE+QY Q QQ +LQ+RLVRDK LE AA E F +LSGE+ G FV ELDR+LGIADEA+R K LKQ+QEW+ +VH IQGRID L++++SK+INERRR DL KFLT TNTK A+FRDIIIESEYDPLEPNRR++KA+V L DPCSRVLDKR +EN LL A EGV G + RE DV WE +++ DTPHGFFAKMM RE ++K G + TSKTY+S++KMDDYN+DRGRDIVTKEFPKGKKTY AGDE AP +SD++ +IGMG Sbjct: 18 SPYAQPSNRPPAFRVRVYNDGLFKSLL-----DD---GRTSSTSPR-SLGRSAKSRPSRPPQEDRSEAMLKAGALAKKKRREKQYLFQLTQQQLLQDRLVRDKLLEAAASKEREFVRLSGEIEAGRTFVKELDRILGIADEAQRGKTLKQYQEWDANVHGAIQGRIDKVLDKMSSKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAVKAKVGHLRDPCSRVLDKRAQENGLL-ADEGVGGAGAMLRESFDVIQWEERKVHDTPHGFFAKMMGREAARNKMGGASTTSKTYRSTIKMDDYNVDRGRDIVTKEFPKGKKTYPAGDELAPPSSDAESLIGMG 358
BLAST of mRNA_H-paniculata_contig1159.1020.1 vs. uniprot
Match: D8LIN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN6_ECTSI) HSP 1 Score: 356 bits (913), Expect = 1.790e-113 Identity = 185/282 (65.60%), Postives = 221/282 (78.37%), Query Frame = 2 Query: 623 IKAGEEGKRKRREEQYRQQAAQQHVLQERLVRDKRLEDAAKMESIFFKLSGEVAEGHKFVDELDRVLGIADEAERSKKLKQFQEWNTHVHDLIQGRIDTALEQITSKEINERRRADLQKFLTATNTKVAIFRDIIIESEYDPLEPNRRSIKARVTQLCDPCSRVLDKRVEENALLSAGEGVSGGTPLAREILDVELWEAQRIKDTPHGFFAKMMNRENNKSKTGCKTATSKTYQSSLKMDDYNIDRGRDIVTKEFPKGKKTYMAGDEYAPLTSDSQMIIGMG 1468 +KAG K+KRRE+QY Q QQ +LQ+RLVRDK LE AA E F +LSGEV G FV ELDR+LGIADEA++ K LKQ+QEW+ +VH IQGRID L++++SK+INERRR DL KFLT TNTK A+FRDIIIESEYDPLEPNRR++KA+V L DPCSRVLDKR EEN LL A EG G + RE DV WE +++ DTPHGFFAKMM RE ++K G TSKTY+S++KMDDYN+DRGRDIVTKEFPKGKKTY AGDE+AP +SD++ +IGMG Sbjct: 2 LKAGALAKKKRREKQYLLQLTQQQLLQDRLVRDKLLEAAASKEREFVRLSGEVEAGRTFVKELDRILGIADEAQQGKTLKQYQEWDANVHGAIQGRIDKVLDKMSSKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAVKAKVGHLRDPCSRVLDKRAEENGLL-ADEGAGGAGAMLRESFDVIQWEERKVHDTPHGFFAKMMGREAARNKMGGAKTTSKTYRSTIKMDDYNVDRGRDIVTKEFPKGKKTYAAGDEFAPPSSDAKSLIGMG 282
BLAST of mRNA_H-paniculata_contig1159.1020.1 vs. uniprot
Match: A0A7S2FRU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FRU1_9STRA) HSP 1 Score: 203 bits (517), Expect = 3.370e-55 Identity = 129/327 (39.45%), Postives = 196/327 (59.94%), Query Frame = 2 Query: 449 PYRVRVYNEELYRQLILHQRQDEPPRGLSKPSSPSGSY---GRSTKSKPSHPSLQQRS----ESKIKAGEEGKRKRREEQYRQQAAQQHVLQERLVRDKRLEDAAKMESIFFKLSGEVAEGHKFVDELDRVLGIADEAERSKKLKQFQEWNTHVHDLIQGRIDTALEQITSKEINERRRADLQKFLTATNTKVAIFRDIIIESEYDPLEPNRRSIKARVTQLCDPCSRVLDKRVEENALLSAGEGVSGGTPL-AREILDVELWEAQRIKDTPHGFFAKMMNRENNKSKTGCKTATSKTYQSSLKMDDYNIDRGRDIVTKEFPKGKKT 1405 P RVR+YNE+ + L+L D+ +G + P P S G +++ + +++ RS E +A E +RKRR E++R +A + ER VR++ + ++ + E F ++ EG + E+ L + D AE++K +QF++WN +V+ +Q RI L++ TS +IN +RR + QKFL TN+K AIFRDIIIESEYDPLEPNR IK + + DPCSRV+DK +EE+ +L + ++ R+ L+V +W +I+ TPHGFFAK+M N+SK G K SKT+ S + D YN+ G+ I EFP+GK+T Sbjct: 12 PSRVRIYNEDHFETLLLDD--DKSTQGGASPGKPETSRSGGGGTSRVEEERSAIKARSLRATERAREADLEEQRKRRFERHRDEAKRMQAESERQVRERLVMNSLRREDKFNHYYSDLVEGRRLASEIKTSLDLQDAAEQNKVRRQFEDWNQNVYGKLQNRISERLDRTTSHDINVKRRQEFQKFLDTTNSKGAIFRDIIIESEYDPLEPNRNCIKVDSSDVRDPCSRVVDKNLEESGMLDSPSAMAAAKMARTRDSLEVTMWGTGKIESTPHGFFAKIMA---NESKQGSKEK-SKTWDSRIPFDHYNVAVGKAITDTEFPRGKRT 332
BLAST of mRNA_H-paniculata_contig1159.1020.1 vs. uniprot
Match: F0YG16_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG16_AURAN) HSP 1 Score: 202 bits (515), Expect = 1.910e-50 Identity = 139/338 (41.12%), Postives = 193/338 (57.10%), Query Frame = 2 Query: 443 PPPYRVRVYNEELYRQLILHQRQDEPPRGLSKPSSPSGSYGRSTKSKPSHPSLQQRSESKIKAGE-EGKRKRREEQYRQQAAQQHVLQERLVRDKRLEDAAKMESIFFKLSGEVAEGHKFVDELDRVLGIADEAERSKKLKQFQEWNTHVHDLIQGRIDTALEQITSKEINERRRADLQKFLTATNTKVAIFRDIIIESEYDPLEPNRRSIKARVTQLCDPCSRVLDKRVEENALLSAGEGVSGGT---------------PLAREILDVELWEAQRIKDTPHGFFAKMMNRENNKSKTGCKTATSKTYQSSLKMDDYNIDRGRDIVTKEFPKGKKTY 1408 P P RV+VY+E+ L+ D PP P+ S + GR T+S + QQRSE + +A E E +R RR E++R +A ++ ER VR++ +E AA+ E F +L ++ EGHK DE+ + L + + R+K +QF EWN V+ IQ +I+ L+ + S EIN RRR + QKFL TN K AIFRDIIIESEYDPLEPNR IK + + DP RVLDK EE ++L G P+ RE L++ W A +I+ TPHG+FAK+M+ K G K SKT++S++ D YN+ G KEFP GK+T+ Sbjct: 316 PSPSRVKVYDEDKLAMLLG----DAPP-----PTHQSVTLGR-TRSIHAAMRAQQRSEKRRQAREAEEQRVRRYERHRDEANKRQAEAERAVREQLIESAARRERKFNELRSDIVEGHKLADEIQQHLSLQEMNARTKLKRQFDEWNDGVYGAIQDQINDRLDGMDSSEINRRRRHEFQKFLDTTNAKGAIFRDIIIESEYDPLEPNRNCIKVKTEGIRDPVKRVLDKHHEETSMLDDDGGGDXXXXXXXXXXXXXXXXPRPVVRETLEITSWGAGKIEATPHGYFAKLMDEA--KPPAGDK-GKSKTFESNIPFDHYNVSVGSAATDKEFPVGKRTH 640
BLAST of mRNA_H-paniculata_contig1159.1020.1 vs. uniprot
Match: A0A8J2SEP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEP3_9STRA) HSP 1 Score: 179 bits (453), Expect = 3.510e-45 Identity = 104/239 (43.51%), Postives = 141/239 (59.00%), Query Frame = 2 Query: 716 RDKRLEDAAKMESIFFKLSGEVAEGHKFVDELDRVLGIADEAERSKKLKQFQEWNTHVHDLIQGRIDTALEQITSKEINERRRADLQKFLTATNTKVAIFRDIIIESEYDPLEPNRRSIKARVTQLCDPCSRVLDKRVEENALLSAGEGVSGGT-------PLAREILDVELWEAQRIKDTPHGFFAKMMNRENNKSKTGCKTATSKTYQSSLKMDDYNIDRGRDIVTKEFPKGKKTYM 1411 R++ E+A + E F L ++ EGHK DE+ + L + D +++K +QF EWN+ V+ IQ +I+ L+ T+ +IN RRR + QKFL ATN K AIFRDIIIESEYDPLEPNR IK L DP RVLD++ EE +L A P RE+LDV W +I+DTPHGFFAKMM+ + + TSKTY S + D + + + D EFP+GKK ++ Sbjct: 208 RERVAENANRRERRFEFLRSDIVEGHKLADEVQKHLQLEDMNKQTKLKRQFDEWNSEVYGKIQDQINERLDSTTAAQINARRRREYQKFLDATNAKGAIFRDIIIESEYDPLEPNRHCIKVDTYGLRDPMKRVLDRQYEEQGMLDASSDEEDKKRKPRRPRPHTREVLDVREWATGKIEDTPHGFFAKMMDAT---PRAPGEKKTSKTYDSKVPFDHFQVQKSLD---GEFPRGKKPHL 440
BLAST of mRNA_H-paniculata_contig1159.1020.1 vs. uniprot
Match: A0A7S1XXV3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXV3_9STRA) HSP 1 Score: 175 bits (444), Expect = 3.590e-45 Identity = 102/232 (43.97%), Postives = 141/232 (60.78%), Query Frame = 2 Query: 713 VRDKRLEDAAKMESIFFKLSGEVAEGHKFVDELDRVLGIADEAERSKKLKQFQEWNTHVHDLIQGRIDTALEQITSKEINERRRADLQKFLTATNTKVAIFRDIIIESEYDPLEPNRRSIKARVTQLCDPCSRVLDKRVEENALLSAGEGVSGGTPLAREI-LDVELWEAQRIKDTPHGFFAKMMNRENNKSKTGCKTATSKTYQSSLKMDDYNIDRGRDIVTKEFPKGKKT 1405 VR+K E+A + E F L V EGH+ VDE+++ + + D E +K+ ++F++WNT+V+ I G I L + +E+N RR D Q+FL ATNTK A+FRDIII EYDPL PNRR I+A+ + DP RVL +R EE +L EG PL R+ L +E W + +I+ TPHGFFA+MM + K Y SS+ +D YNI GR +V EFP+GK+T Sbjct: 92 VREKIAENARRREDDFQALKTSVFEGHQLVDEIEKDMTLKDMNELNKQRRKFEDWNTNVYGKIHGDITRQLNERPYQEVNVNRRRDFQQFLDATNTKGALFRDIIIPEEYDPLAPNRRCIRAQPKTIDDPVKRVLARRDEEERML---EGPKPQVPLGRKSDLKLEHWASGKIEATPHGFFARMMAKPQGKGDN--------LYASSIVLDHYNIATGRAVVNAEFPRGKRT 312
BLAST of mRNA_H-paniculata_contig1159.1020.1 vs. uniprot
Match: A0A482S2M0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2M0_9ARCH) HSP 1 Score: 163 bits (413), Expect = 8.500e-41 Identity = 89/222 (40.09%), Postives = 138/222 (62.16%), Query Frame = 2 Query: 743 KMESIFFKLSGEVAEGHKFVDELDRVLGIADEAERSKKLKQFQEWNTHVHDLIQGRIDTALEQITSKEINERRRADLQKFLTATNTKVAIFRDIIIESEYDPLEPNRRSIKARVTQLCDPCSRVLDKRVEENALLSAGEGVSGGTPLAREILDVELWEAQRIKDTPHGFFAKMMNRENNKSKTGCKTATSKTYQSSLKMDDYNIDRGRDIVTKEFPKGKKTY 1408 + E F +L ++ +F+ +++ + +ADEA+R+K +QF++WNT+VH +IQ +I + ++ + K +N ++ D KFL TN K AIFRDIIIESEYDPLEPNR +KA+ ++L DP L K +E +L A E L + LDV+LW + +I+ TP+G FAKMMN+ S ++AT +SS+ D ++ +GR + KE P+GK+ Y Sbjct: 93 RKEKEFPELLAKIDRAREFLGTVEKEMELADEAKRNKVRRQFEDWNTNVHGVIQKKIASQIDSMDKKALNWKKNQDYDKFLGITNRKAAIFRDIIIESEYDPLEPNRHCVKAKTSKLHDPPKFGLHKAEKEKGMLGA-EHAPPKVLLGKNTLDVQLWASGQIEATPYGTFAKMMNKPTGHSGNSPQSAT---QRSSVAFDHFSFPQGRAAIDKEMPRGKRVY 310
BLAST of mRNA_H-paniculata_contig1159.1020.1 vs. uniprot
Match: A0A485LK25_9STRA (Aste57867_20610 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK25_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.690e-34 Identity = 88/261 (33.72%), Postives = 141/261 (54.02%), Query Frame = 2 Query: 686 QQHVLQERL---VRDKRLEDAAKMESIFFKLSGEVAEGHKFVDELDRVLGIADEAERSKKLKQFQEWNTHVHDLIQGRIDTALEQITSKEINERRRADLQKFLTATNTKVAIFRDIIIESEYDPLEPNRRSIKARVTQLCDPCSRVLDKRVEENALLSAGEGVSGGTPLAR--------------EILDVELWEAQRIKDTPHGFFAKMMNRENNKSKTGCKTATSKTYQSSLKMDDYNIDRGRDIVTKEFPKGKKTYMAG 1417 +Q V+Q+++ + D + K E+ + KL ++ EG EL+ L + +E + +K + + EWN V++ + G I+ ++ + +K +N+ ++ Q FL N K +FRDIIIESEYDPL N+ +I+ R T++ DPC RV+ R EE A+ + G GG P+ + LD +LW + TP+G+F KMM + SKTY+S +K D Y+I++G + KEFPKGK+T G Sbjct: 42 EQEVIQKQIQINIADAITKQRNKREANYLKLRNDIEEGKALAQELEERLTLKEETAKRQKQRLYDEWNEKVYEKLNGPINERVKAMDAKALNQHKQEAYQHFLDTANKKGCLFRDIIIESEYDPLNDNK-AIRYR-TRVDDPCCRVIKHREEEEAIANEGRNNIGGDPMDSSGSGGGGAVVLGRCDNLDTKLWANGVFESTPYGYFNKMM-------ASTISDECSKTYESRVKFDHYDIEKGLGTLNKEFPKGKRTTFNG 293
BLAST of mRNA_H-paniculata_contig1159.1020.1 vs. uniprot
Match: A0A6G0XK92_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XK92_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.530e-34 Identity = 91/249 (36.55%), Postives = 135/249 (54.22%), Query Frame = 2 Query: 743 KMESIFFKLSGEVAEGHKFVDELDRVLGIADEAERSKKLKQFQEWNTHVHDLIQGRIDTALEQITSKEINERRRADLQKFLTATNTKVAIFRDIIIESEYDPLEPNRRSIKARVTQLCDPCSRVLDKRVEENALLSAGEGV----------SGGTPLAR-EILDVELWEAQRIKDTPHGFFAKMMNRENNKSKTGCKTATSKTYQSSLKMDDYNIDRGRDIVTKEFPKGKKTYMAGDEYAPLTSDSQMI 1456 K E+ F KL ++ EG +EL L + +E + +K + + EW V++ + I+ ++ + K +N+ ++ Q FL N K +FRDIIIESEYDPL N+ ++K R T++ DPCSRVL R EE+A+ G V SG L R + LD +LW + TP+G+F KMM + +SKTYQS +K D Y+I++G + +EFPKGK+T G A L S Q + Sbjct: 31 KREANFLKLRNDIEEGKVLAEELGERLTLKEETAKRQKQRLYDEWTEKVYNKLNRPINEKIKSMDPKALNQHKQEAYQHFLDTVNKKGCLFRDIIIESEYDPLNDNK-AVKYR-TRVDDPCSRVLKTRDEEDAIAKEGRNVMNESMDSTSTSGNVVLGRCDNLDTKLWAKGIFESTPYGYFNKMM-------ASTISEESSKTYQSRVKFDHYDIEQGSATLNQEFPKGKRTTFGG--IAGLNSKDQYV 268
BLAST of mRNA_H-paniculata_contig1159.1020.1 vs. uniprot
Match: W4FLA8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FLA8_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.840e-33 Identity = 90/252 (35.71%), Postives = 139/252 (55.16%), Query Frame = 2 Query: 743 KMESIFFKLSGEVAEGHKFVDELDRVLGIADEAERSKKLKQFQEWNTHVHDLIQGRIDTALEQITSKEINERRRADLQKFLTATNTKVAIFRDIIIESEYDPLEPNRRSIKARVTQLCDPCSRVLDKRVEENALLSAGEGV---------SGGTPLAR---EILDVELWEAQRIKDTPHGFFAKMMNRENNKSKTGCKTATSKTYQSSLKMDDYNIDRGRDIVTKEFPKGKKTYMAGDEYAPLTSDSQMIIG 1462 K E+ + KL ++ EG +EL+ L + +E + +K + + EW+ V + I G I+ ++ + +K +N ++ Q FL N K +FRDIIIESEYDPL N+ SI+ VT + DPC RV+ R EE A+ + G+ V +G PL + LD +LW + + TP+G+F KMM + +SKTY+S +K D Y+I++G + KEFPKGK+T G + L S Q+ +G Sbjct: 95 KREANYVKLRRDIDEGKSLAEELEERLSLKEETAKRQKQRLYDEWSEKVFNKINGPINDRVKAMDAKALNLHKQEAYQHFLDTANKKGCLFRDIIIESEYDPLHDNK-SIR-HVTHVDDPCCRVIKHREEEEAIANEGKKVLDDSMEPRGTGTAPLILGRCDNLDTKLWASGIFESTPYGYFNKMM-------ASTISAESSKTYESRVKFDHYDIEKGLGTLNKEFPKGKQTTFNG--VSGLKSKDQVRLG 335 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1159.1020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1159.1020.1 >prot_H-paniculata_contig1159.1020.1 ID=prot_H-paniculata_contig1159.1020.1|Name=mRNA_H-paniculata_contig1159.1020.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=370bp MAAAPSSRASCADAELRSPYAQPSNRPPPYRVRVYNEELYRQLILHQRQDback to top mRNA from alignment at H-paniculata_contig1159:4368..15988- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1159.1020.1 ID=mRNA_H-paniculata_contig1159.1020.1|Name=mRNA_H-paniculata_contig1159.1020.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11621bp|location=Sequence derived from alignment at H-paniculata_contig1159:4368..15988- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1159:4368..15988- >mRNA_H-paniculata_contig1159.1020.1 ID=mRNA_H-paniculata_contig1159.1020.1|Name=mRNA_H-paniculata_contig1159.1020.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2220bp|location=Sequence derived from alignment at H-paniculata_contig1159:4368..15988- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |