mRNA_H-paniculata_contig11588.1019.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11588.1019.1 vs. uniprot
Match: A0A6H5JS50_9PHAE (PKS_ER domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JS50_9PHAE) HSP 1 Score: 382 bits (980), Expect = 4.870e-124 Identity = 191/257 (74.32%), Postives = 223/257 (86.77%), Query Frame = 3 Query: 9 RFRLGDRVVAFVGFGGYTTDLVVKEINVAPLPSGMDFITGASFVLAYGTADYALRVRAKVRTGELVLVLGASGGVGLAAVQLAKAAGATVIAAASTPEKLETCRDSGADFLLNYRDPKDSRAGKSRAGNWRQALKRLVGPRGIDVVLDSVGGADCETALRSMAVGGRYLVIGFASGTIPAPSLNLVLLKEVCVIGIFWGAWLKRDPEGSAQQLKELVRLYGEGLVRPVISRVYPLHEAPRALDDMGARRVVGKLVID 779 RF+ GDRVV+FVGFGG++T++VV+E +VAPLPSGMDF T + +AYGTADYALR+RA +R GELVLVLGASGGVGLAAVQLAKAAGATVIAAAST EKL+ CRDSGADFLLNYR + G R G+WR ALKRL G RG+DVVLD+VGGADCETA+RS+AVGGRYLV+GFASGTIPAP LNLVLLKE CV+G+FWGAW +R+PE SA+Q+ E+VRL G V+P ISRVYPL +APRAL+DMGAR+VVGK+VID Sbjct: 79 RFKPGDRVVSFVGFGGFSTNVVVREGSVAPLPSGMDFFTASCLFVAYGTADYALRIRANLRRGELVLVLGASGGVGLAAVQLAKAAGATVIAAASTREKLQACRDSGADFLLNYRQG-NGNGGDQRGGDWRGALKRLTGGRGVDVVLDNVGGADCETAVRSLAVGGRYLVVGFASGTIPAPPLNLVLLKEACVMGVFWGAWREREPEKSAEQMVEIVRLVSLGKVKPTISRVYPLDQAPRALEDMGARKVVGKVVID 334
BLAST of mRNA_H-paniculata_contig11588.1019.1 vs. uniprot
Match: A0A7V8JYE5_9BURK (Quinone oxidoreductase 1 n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A7V8JYE5_9BURK) HSP 1 Score: 248 bits (632), Expect = 9.350e-73 Identity = 132/256 (51.56%), Postives = 174/256 (67.97%), Query Frame = 3 Query: 9 RFRLGDRVVAFVGFGGYTTDLVVKEINVAPLPSGMDFITGASFVLAYGTADYALRVRAKVRTGELVLVLGASGGVGLAAVQLAKAAGATVIAAASTPEKLETCRDSGADFLLNYRDPKDSRAGKSRAGNWRQALKRLVGPRGIDVVLDSVGGADCETALRSMAVGGRYLVIGFASGTIPAPSLNLVLLKEVCVIGIFWGAWLKRDPEGSAQQLKELVRLYGEGLVRPVISRVYPLHEAPRALDDMGARRVVGKLVI 776 RF+ GDRV+A +GGY ++V + P+P GMDF T A+F L YGT+ +AL+ RA ++ GE +LVLGA+GGVGLAAV+L KA GA VIAAAS+P KL CRD GAD L++Y A + R+ +K L G RG+DVV D VGG E ALR MA GR+LV+GFA+G IP+ LNL LLK V+G+FWGA+ + +PE +A L+EL++ G+G +RP +S YPL A ALDD+ RRV GK+V+ Sbjct: 78 RFKPGDRVIAATTWGGYAEEVVAEAARTLPMPDGMDFATAAAFTLTYGTSHHALKDRAVLQPGETLLVLGAAGGVGLAAVELGKAMGARVIAAASSPAKLAVCRDHGADELIDY-----------AAEDLRERIKALTGGRGVDVVYDPVGGDYSEPALRGMAWRGRFLVVGFAAGRIPSLPLNLPLLKGCAVLGVFWGAFTRNEPELNAANLRELMQWVGDGRLRPHVSARYPLERAADALDDLVQRRVHGKVVL 322
BLAST of mRNA_H-paniculata_contig11588.1019.1 vs. uniprot
Match: UPI001C441DB0 (NADPH:quinone oxidoreductase family protein n=1 Tax=Duganella sp. sic0402 TaxID=2854786 RepID=UPI001C441DB0) HSP 1 Score: 245 bits (626), Expect = 7.490e-72 Identity = 125/255 (49.02%), Postives = 175/255 (68.63%), Query Frame = 3 Query: 12 FRLGDRVVAFVGFGGYTTDLVVKEINVAPLPSGMDFITGASFVLAYGTADYALRVRAKVRTGELVLVLGASGGVGLAAVQLAKAAGATVIAAASTPEKLETCRDSGADFLLNYRDPKDSRAGKSRAGNWRQALKRLVGPRGIDVVLDSVGGADCETALRSMAVGGRYLVIGFASGTIPAPSLNLVLLKEVCVIGIFWGAWLKRDPEGSAQQLKELVRLYGEGLVRPVISRVYPLHEAPRALDDMGARRVVGKLVI 776 F++GD+V+AF GG+ L+ + P+P GMDF T A+ L YGT+ +A+ RAK++ GE +L+LGA+GGVGLAA+++ KA GA +IA AS+ EKL CR GAD L+NY SR +WR+A+K G +G+DVV D VGG E A RS+A GGRYLV+GFA+G IP LNL LLK ++G+FWG + KRDP+G+ +++L++ EG ++P IS Y L++AP+AL+DM ARRV GK+V+ Sbjct: 79 FKVGDKVIAFTSTGGFGQQLLAPVQALIPMPPGMDFDTAAAITLTYGTSYHAIVDRAKLKNGENMLILGAAGGVGLAAIEIGKALGARIIACASSEEKLAVCRQHGADVLINY----------SRE-DWREAVKAATGGKGVDVVYDPVGGDYAEPAFRSIAWGGRYLVVGFANGEIPKLPLNLTLLKGASLVGVFWGEFTKRDPKGNMGNMRQLLQWLQEGKIKPRISARYALNDAPQALNDMAARRVTGKIVV 322
BLAST of mRNA_H-paniculata_contig11588.1019.1 vs. uniprot
Match: A0A0Q8QBC2_9BURK (NADPH:quinone oxidoreductase n=2 Tax=Oxalobacteraceae TaxID=75682 RepID=A0A0Q8QBC2_9BURK) HSP 1 Score: 245 bits (625), Expect = 1.110e-71 Identity = 128/255 (50.20%), Postives = 174/255 (68.24%), Query Frame = 3 Query: 12 FRLGDRVVAFVGFGGYTTDLVVKEINVAPLPSGMDFITGASFVLAYGTADYALRVRAKVRTGELVLVLGASGGVGLAAVQLAKAAGATVIAAASTPEKLETCRDSGADFLLNYRDPKDSRAGKSRAGNWRQALKRLVGPRGIDVVLDSVGGADCETALRSMAVGGRYLVIGFASGTIPAPSLNLVLLKEVCVIGIFWGAWLKRDPEGSAQQLKELVRLYGEGLVRPVISRVYPLHEAPRALDDMGARRVVGKLVI 776 FR G+RV+A G+GGY + +E + PLP G+DF A+F++AYGT YAL+ RA +R GE +LVLGA+GG GL+AV++ K GA VIAAAS+ EKL CR+ GAD L+NY SR + RQ LK L G RG+D+V D VGG+ E ALRSMA GR+LVIGF +G IP +LNL LLK ++G++WG +L+ +PE +A +ELV + +G VRP IS+ YPL +A +AL ++ AR+ GK+V+ Sbjct: 79 FRPGERVIAVPGYGGYAEQTLAREEDTFPLPDGIDFADAAAFLIAYGTTHYALQERAALRPGETLLVLGAAGGTGLSAVEMGKLLGARVIAAASSDEKLALCREHGADELINY----------SRE-DLRQRLKELTGGRGVDIVYDPVGGSFSEAALRSMAWNGRFLVIGFTAGEIPKVALNLTLLKGCSIVGVWWGGFLRSEPERAAALTRELVEWFRQGKVRPYISKRYPLEQAAQALAEVAARKATGKIVL 322
BLAST of mRNA_H-paniculata_contig11588.1019.1 vs. uniprot
Match: A0A7X7AKE0_9BURK (NADPH:quinone oxidoreductase family protein n=1 Tax=Alcaligenaceae bacterium TaxID=2021368 RepID=A0A7X7AKE0_9BURK) HSP 1 Score: 242 bits (617), Expect = 1.410e-70 Identity = 123/256 (48.05%), Postives = 170/256 (66.41%), Query Frame = 3 Query: 9 RFRLGDRVVAFVGFGGYTTDLVVKEINVAPLPSGMDFITGASFVLAYGTADYALRVRAKVRTGELVLVLGASGGVGLAAVQLAKAAGATVIAAASTPEKLETCRDSGADFLLNYRDPKDSRAGKSRAGNWRQALKRLVGPRGIDVVLDSVGGADCETALRSMAVGGRYLVIGFASGTIPAPSLNLVLLKEVCVIGIFWGAWLKRDPEGSAQQLKELVRLYGEGLVRPVISRVYPLHEAPRALDDMGARRVVGKLVI 776 +F +G RVVA +G+GG+ + + PLP GM F ++FVL YGT+ YAL+ RA+++ GE +L+LGA+GGVGLAA+Q+AKA GA VIAAAS+ EK + C GAD +++Y ++R LK L G +G+DV+ D VGG+ E A RS+A GR+LV+GFA+G IP LNL LLK ++G+FWGA+ + +PE AQ +KEL LY EG V+PVI YPL AP AL+ + R+ +GK+VI Sbjct: 78 QFEVGQRVVAPIGYGGFAEEAIADASRACPLPEGMSFEEASAFVLTYGTSYYALKNRAELKKGETLLILGAAGGVGLAAIQIAKAMGAVVIAAASSEEKRQLCLREGADHVVDYTQE-----------DFRDRLKELTGGKGVDVIYDPVGGSASEPAFRSIAWKGRFLVVGFAAGDIPRIPLNLPLLKGASIVGVFWGAFGRTEPEADAQNMKELFELYAEGKVKPVICATYPLERAPEALEFVAGRQALGKVVI 322
BLAST of mRNA_H-paniculata_contig11588.1019.1 vs. uniprot
Match: A0A6B3SZ63_9BURK (NADPH:quinone oxidoreductase family protein n=1 Tax=Noviherbaspirillum galbum TaxID=2709383 RepID=A0A6B3SZ63_9BURK) HSP 1 Score: 241 bits (616), Expect = 2.290e-70 Identity = 129/256 (50.39%), Postives = 172/256 (67.19%), Query Frame = 3 Query: 9 RFRLGDRVVAFVGFGGYTTDLVVKEINVAPLPSGMDFITGASFVLAYGTADYALRVRAKVRTGELVLVLGASGGVGLAAVQLAKAAGATVIAAASTPEKLETCRDSGADFLLNYRDPKDSRAGKSRAGNWRQALKRLVGPRGIDVVLDSVGGADCETALRSMAVGGRYLVIGFASGTIPAPSLNLVLLKEVCVIGIFWGAWLKRDPEGSAQQLKELVRLYGEGLVRPVISRVYPLHEAPRALDDMGARRVVGKLVI 776 RFR GDRV+A G+GGY + +E +V PLP G+DF A+F++AYGT YAL+ RA +RTGE +LVLGA+GG GL+AV+L K GA VIAAAS+ EKL CR+ GAD ++NY SR + RQ LK + G RG+DVV D VGG+ E ALRSMA GR+LVIGF +G IP LNL LLK ++G++WG +L+ +P+ +A +ELV + +G VRP +S Y L +A AL + R+V GK+V+ Sbjct: 78 RFRAGDRVIAVPGYGGYAEQALAREEDVFPLPEGIDFGDAAAFLVAYGTTHYALQERAAIRTGETLLVLGAAGGTGLSAVELGKLLGARVIAAASSDEKLALCREHGADEVINY----------SRE-DLRQRLKEMTGGRGVDVVYDPVGGSYSEAALRSMAWNGRFLVIGFTAGDIPRVPLNLTLLKGCSIVGVWWGGFLRAEPQRAAALTQELVEWFRQGKVRPHVSMRYSLDQAAVALSQVAQRKVTGKMVL 322
BLAST of mRNA_H-paniculata_contig11588.1019.1 vs. uniprot
Match: A0A024HB33_PSEKB (Quinone oxidoreductase-like protein 2 homolog n=38 Tax=Proteobacteria TaxID=1224 RepID=A0A024HB33_PSEKB) HSP 1 Score: 241 bits (615), Expect = 2.760e-70 Identity = 121/257 (47.08%), Postives = 175/257 (68.09%), Query Frame = 3 Query: 6 NRFRLGDRVVAFVGFGGYTTDLVVKEINVAPLPSGMDFITGASFVLAYGTADYALRVRAKVRTGELVLVLGASGGVGLAAVQLAKAAGATVIAAASTPEKLETCRDSGADFLLNYRDPKDSRAGKSRAGNWRQALKRLVGPRGIDVVLDSVGGADCETALRSMAVGGRYLVIGFASGTIPAPSLNLVLLKEVCVIGIFWGAWLKRDPEGSAQQLKELVRLYGEGLVRPVISRVYPLHEAPRALDDMGARRVVGKLVI 776 + ++GDRV+A G+G + + V NV P+P+GMDF T A+F + YGT+ +AL+ RA ++ GE +LVLGASGGVGLAAV++ KA GA VIAAAS+ KLE + +GAD L+NY + G+ + LK + G +G+DV+ D VGG E A RS+A GR LV+GFASGTIP+ NL LLK ++G+FWGA+ +R P+ +A ++L + YGEG ++P++S+ YPL +A A++ +G RR VGK+V+ Sbjct: 77 SHLKVGDRVIALTGWGSFAEQVAVGGYNVLPIPAGMDFTTAAAFGMTYGTSMHALKQRANLQPGETLLVLGASGGVGLAAVEIGKAMGAKVIAAASSDAKLEVAKAAGADVLINYSE-----------GSLKDKLKEITGGQGVDVIYDPVGGDFFEEAFRSIAWNGRLLVVGFASGTIPSLPANLPLLKGASLVGVFWGAFAQRQPQDNAANFQQLFQWYGEGKLKPLVSQTYPLEKAADAINHLGQRRAVGKVVV 322
BLAST of mRNA_H-paniculata_contig11588.1019.1 vs. uniprot
Match: A0A3G8YA47_9DEIO (NADPH:quinone oxidoreductase family protein n=3 Tax=Deinococcus TaxID=1298 RepID=A0A3G8YA47_9DEIO) HSP 1 Score: 240 bits (612), Expect = 7.790e-70 Identity = 129/255 (50.59%), Postives = 166/255 (65.10%), Query Frame = 3 Query: 15 RLGDRVVAFVGFGGYTTDLVVKEINVAPLPSGMDFITGASFVLAYGTADYALRVRAKVRTGELVLVLGASGGVGLAAVQLAKAAGATVIAAASTPEKLETCRDSGADFLLNYRDPKDSRAGKSRAGNWRQALKRLVGPRGIDVVLDSVGGADCETALRSMAVGGRYLVIGFASGTIPAPSLNLVLLKEVCVIGIFWGAWLKRDPEGSAQQLKELVRLYGEGLVRPVISRVYPLHEAPRALDDMGARRVVGKLVID 779 ++GDRV +FV GG+ V PLP+G+DF GA+ LAYGT+ +AL RA+++ G+ +LVLGA+GGVGLAAVQ+ KA GA VIAAAST EKLE CR +GAD +NY + R ALK L G +G DV+ D VGG E A RS+A GG+YLV+GFA G IPA LNL LLK ++G+FWG + KRDP+ + L +L+ GEG V+P IS Y L + P+AL DM R+V GK VI+ Sbjct: 80 KVGDRVASFVQLGGFAQQAVAPANATFPLPNGVDFAEGAALPLAYGTSAHALLDRAELKAGQTLLVLGAAGGVGLAAVQIGKALGARVIAAASTDEKLELCRQNGADDTINY-----------STQDLRSALKELTGGKGPDVIYDPVGGKLAEPAFRSIAWGGKYLVVGFAEGEIPALPLNLALLKGASIVGVFWGEFAKRDPKKNLANLHQLLTWMGEGKVKPYISARYALADVPQALKDMAGRKVTGKAVIE 323
BLAST of mRNA_H-paniculata_contig11588.1019.1 vs. uniprot
Match: A0A3D0ETH9_9PROT (NADPH:quinone oxidoreductase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3D0ETH9_9PROT) HSP 1 Score: 239 bits (611), Expect = 1.090e-69 Identity = 126/257 (49.03%), Postives = 174/257 (67.70%), Query Frame = 3 Query: 15 RLGDRVVAFVGFGGYTTDLVVKEINVAPLPSGMDFITGASFVLAYGTADYALRVRAKVRTGELVLVLGASGGVGLAAVQLAKAAGATVIAAASTPEKLETCRDSGADFLLNYRDPKDSRAGKSRAGNWRQALKRLVGPRGIDVVLDSVGGADCETALRSMAVGGRYLVIGFASGTIPAPSLNLVLLKEVCVIGIFWGAWLKRDPEGSAQQLKELVRLYGEGLVRPVISRVYPLHEAPRALDDMGARRVVGKLVIDCS 785 ++GDRV+AF +GG+ +LVV + + MDF ++FVL YGT+ +AL+ RA +R GE +LVLGASGGVG+AA+QL KA GATVIAAAS EKL C+ SGAD L+NY + + RQ++K + RG+DVV D VGG+ E ALR M+ GGR+LV+GFASG IP LNL LLK V+G+FWG + KR+PE + + +EL+ L+ +G + P I +VYPL A AL+++ +RV+GK+V+ S Sbjct: 80 KVGDRVIAFSTWGGFAEELVVDQSRTVMISDKMDFERASAFVLTYGTSYHALKDRALLRAGETLLVLGASGGVGIAAIQLGKALGATVIAAASNAEKLSVCKQSGADHLINYSE-----------SDLRQSVKEITQGRGVDVVYDPVGGSFSEKALRDMSWGGRFLVVGFASGEIPKVPLNLPLLKGCSVVGVFWGEFTKREPELNRKNNQELMDLFDQGKISPHIHKVYPLERAGEALNELLQKRVIGKVVLSTS 325
BLAST of mRNA_H-paniculata_contig11588.1019.1 vs. uniprot
Match: A0A4U1HPY3_9DELT (NADPH:quinone oxidoreductase family protein n=1 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1HPY3_9DELT) HSP 1 Score: 239 bits (611), Expect = 1.120e-69 Identity = 125/252 (49.60%), Postives = 172/252 (68.25%), Query Frame = 3 Query: 21 GDRVVAFVGFGGYTTDLVVKEINVAPLPSGMDFITGASFVLAYGTADYALRVRAKVRTGELVLVLGASGGVGLAAVQLAKAAGATVIAAASTPEKLETCRDSGADFLLNYRDPKDSRAGKSRAGNWRQALKRLVGPRGIDVVLDSVGGADCETALRSMAVGGRYLVIGFASGTIPAPSLNLVLLKEVCVIGIFWGAWLKRDPEGSAQQLKELVRLYGEGLVRPVISRVYPLHEAPRALDDMGARRVVGKLVI 776 GDRV+A +GG++ ++VV E NVAP+P GMDF+T ++F++AYGT+ +AL RA+++ GE + VLGA+GGVGLAAV++ K GA VIA AS +KLE C++ GAD ++NY + ++ +K L G +G DVV D VGG E ALRS A GR+LV+GFA G IP LNLVLLK V+G+FWG+++ R+PE + Q L EL+R + E +RP +S +PL A ALD M ARRV GK+V+ Sbjct: 82 GDRVLATTMWGGFSEEVVVGEANVAPIPDGMDFVTASAFLMAYGTSHHALVDRAQLKAGETLCVLGAAGGVGLAAVEIGKVLGARVIACASADDKLEVCKEHGADAVVNY-----------AREDLKERIKELTGGKGADVVYDPVGGPFSEAALRSTAWEGRFLVVGFAGGEIPRIPLNLVLLKGCQVVGVFWGSFIAREPERNRQNLAELLRWFEEKKIRPHVSETFPLERAKDALDAMAARRVKGKVVL 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11588.1019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11588.1019.1 >prot_H-paniculata_contig11588.1019.1 ID=prot_H-paniculata_contig11588.1019.1|Name=mRNA_H-paniculata_contig11588.1019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp MDFITGASFVLAYGTADYALRVRAKVRTGELVLVLGASGGVGLAAVQLAKback to top mRNA from alignment at H-paniculata_contig11588:870..5580+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11588.1019.1 ID=mRNA_H-paniculata_contig11588.1019.1|Name=mRNA_H-paniculata_contig11588.1019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4711bp|location=Sequence derived from alignment at H-paniculata_contig11588:870..5580+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11588:870..5580+ >mRNA_H-paniculata_contig11588.1019.1 ID=mRNA_H-paniculata_contig11588.1019.1|Name=mRNA_H-paniculata_contig11588.1019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at H-paniculata_contig11588:870..5580+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |