mRNA_H-paniculata_contig1158.1016.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1158.1016.1 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI) HSP 1 Score: 544 bits (1402), Expect = 1.560e-165 Identity = 472/884 (53.39%), Postives = 570/884 (64.48%), Query Frame = 1
Query: 10 AKEEAEATLRSLQQQHGEQSAALESQMEEERKSRETKXXXXXXXXXXXXXXXXXAAALSEQELKKEHQRLEEAEKLERERFIQEAEDEKLRRIEAQRKSQDIALAKAMEAATRATEXXXXXXXXXXXXXXVREAVEKAQKDEFQRKAEKLKEASQAEEERAKLALAGQTVTNKSKLTDRLAKRKAKAEAAKHDLATSQKXXXXXXXXXXXXXXXXXX--------------IAAAPGWITGVAWDKAVEAALAEPLRDGEQPRDREARVLKSVLEAGIVPDKKLGK------------------CVEAVMSRRHDVETSDLLTAQYKERATKLTSSLGTLLTEKTRSRAEALRRLPE-NADAKERAEVTAEVEDEFAGQQQQLEVHLMQEMEPIHLEKQLELRQKQLLEVAATVKRIAPEDAIQRLQELAAARQEEELEELQSTMESQKQERIKRVEEXXXXXXXXXXXXXXXXXXXXXXQDERIMIAEKEAQETRMNEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXALLERFKRDQAAGLNALKAEGASQKTKLEQRLVARRQKKAEELTKKEALEMKRKEMRDKHTLQELEKSTNLAETLETAILAASQTAGDGLNVEIDQHVVRLARKLGVPNEARDQLKKTLADSESRSRLHRRGSATLIDGEHGAREDSVGGDGASAAXXXXXXXXXXTVAAYTRINAKLEDIEGLITALKAAQNNPNVSGQASTVGAAGWPEAYRDAEDIATVPDGDDLQVIPRDSLPVQALARVEFGEHLLSVLGLADTVTLQVAKNLPPALLARGHGGAGGGDGPANANAFRNTYLWDAGIGVLYVHARRLSRSGDFGLALIHAAAHISVDPSDLSNDLDPRFTHHFHRSLKVLT 2562
AK+EA L+ LQ+QH EQ AALE QM XXXXXXXXXXXXXXXXX AALSE+E + + E+ ER+RF + E+E + +AQR+ Q+ ALA+A XXXXXXXXXXXXXX VE A++++F+RKA+KLKE S A EE+ K ALAG + T+KS+L DRLAK+KAKAEA K +L +QK AAAPGW +AWD+AV A+AE R GE DREARVLKSVLEAGIVP+KKLGK CVE VMS RHD ET++LLT QYK+RA++L +SLG LL EK +RAEA++RL + NA +ERA+ A+V+D+FAG+QQQ+E ++Q+MEP HLE+QLELRQ+QL E+A T + IAPE A++RLQE+ A R EEELE + XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX ALLE+FK DQAA L ALKAE S K+KLEQ+L ARRQKK EE+ LQE+E+ T L + E L+AS + L V+IDQ ++LARK G PNEA+++LK+TLA +E+R + R S + R G XXXXXXXXXX YT I++KLE IEGLI+ALKAAQ N + G + G G + YRDAED AT+P+G+DLQVIPRD LPVQA+AR+EFGEHLLSVLGLADTV LQVAKNLPP + G GG NANAFRN+YLW+A GVL +H RRLS SGDFGL L+HAAAHI VDPSD++NDLDPRFT HFHRSLKVLT
Sbjct: 5755 AKQEAVGCLQRLQKQHAEQHAALEHQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALSEREKQIXXXXXXDEERAERQRFHDQLEEEIKKSADAQRRHQEEALAEATXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAEQEDFKRKAQKLKELSLANEEKEKAALAGSSATSKSRLMDRLAKKKAKAEAKKRELEAAQKVEEERLLAKHKNPPHLPTKRPTNSKEEVEAARAAAAPGWTGDIAWDEAVMVAMAEEPRAGETQSDREARVLKSVLEAGIVPEKKLGKVGPGRAGWRLGGTDYRIMCVELVMSGRHDKETAELLTTQYKQRASRLATSLGELLVEKNTARAEAMQRLAKMNATDEERADAAADVDDDFAGRQQQMETSIIQQMEPPHLEQQLELRQRQLQEIAGTFRAIAPESALERLQEINATRHEEELENFHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDQLNASQKEALLEQFKLDQAAELGALKAEEQSSKSKLEQKLAARRQKKTEEMXXXXXXXXXXXXXXXXQRLQEIERQTQLEDAAEVGALSASGSVS-ALKVDIDQAAIQLARKRGGPNEAKERLKETLAANETRKMVQRHNSVS-------GRGSLSGAGXXXXXXXXXXXXXXXXXXXYTHISSKLEGIEGLISALKAAQGN-RLLGPGISAGGDGSTQVYRDAEDEATIPEGNDLQVIPRDKLPVQAVARLEFGEHLLSVLGLADTVRLQVAKNLPPTDVPSQGSGTGG---RLNANAFRNSYLWEASTGVLNLHVRRLSSSGDFGLVLVHAAAHIHVDPSDMTNDLDPRFTQHFHRSLKVLT 6626
BLAST of mRNA_H-paniculata_contig1158.1016.1 vs. uniprot
Match: A0A6H5KWQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ4_9PHAE) HSP 1 Score: 425 bits (1092), Expect = 1.540e-124 Identity = 403/860 (46.86%), Postives = 479/860 (55.70%), Query Frame = 1
Query: 10 AKEEAEATLRSLQQQHGEQSAALESQMEEERKSRETKXXXXXXXXXXXXXXXXXAAALSEQELKKEHQRLEEAEKLERERFIQEAEDEKLRRIEAQRKSQDIALAKAMEAATRATEXXXXXXXXXXXXXXVREAVEKAQKDEFQRKAEKLKEASQAEEERAKLALAGQTVTNKSKLTDRLAKRKAKAEAAKHDLATSQKXXXXXXXXXXXXXXXXXXIAAAPGWITGVAWDKAVEAALAEPLRDGEQPRDREARVLKSVLEAGIVPDKKLGKCVEAVMSRRHDVETSDLLTAQYKERATKLTSSLGTLLTEKTRSRAEALRRLPENADAKERAEVTAEVEDEFAGQQQQLEVHLMQEMEPIHLEKQLELRQKQLLEVAATVKRIAPEDAIQRLQELAAARQEEELEELQSTMESQKQERIKRVEEXXXXXXXXXXXXXXXXXXXXXXQDERIMIAEKEAQETRMNEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXALLERFKRDQAAGLNALKAEGASQKTKLEQRLVARRQKKAEELTKKEALEMKRKEMRDKHTLQELEKSTNLAETLETAILAASQTAGDGLNVEIDQHVVRLARK-LGVPNEARDQLKKTLADSESRSRLHRRGSATLIDGEHGAREDSVGG----DGASAAXXXXXXXXXXTVAAYT---RINAKLEDIEGLITALKAAQNNPNVSGQASTVGAAGWPEAYRDAEDIATVPDGDDLQVIPRDSLPVQALARVEFGEHLLSVLGLADTVTLQVAKNLPPA-LLARGHGGAGGGDGPANANAFRNTYLWDAGIGVLYVHARRLSRSGDFGLALIHAAAHISVDPSDLSNDLDPRFTHHFHRSLKVLT 2562
AK+EA L+ LQ+QH EQ AALE QMEEE++SRE K XXXXX AALSE R ++ ++ A A AT A VREAVE A+++EF+RKA+KLKE S A EE+ K ALAG + T+K LAK+KAKAEA K +L +QK AAPGW +AWD+AV A+AE R GE DREARVLKSVLEAGIVP+KKLGK RR ++ L NA +ERA+ A+V+D+FAG+QQQ+E ++Q LELRQ+QL E+A T + IAPE A++RLQE+ AAR +EELE + XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX ALLE+FK DQAA L ALKAE S K+KLEQ+L ARRQKK EE+ LQE+E+ T L + E L+AS + L V+IDQ + LARK L N+ + L +I G R +SV G GAS XXXXXXXXXX I++KLE IEGLI+ALKAAQ N + G + G G + YRDAED AT+P+G+DLQVIPRD LPVQALAR+EFGEHLLSVLGLADTV LQVAKNLPP +L++G G G NANAFRN+YLW+A GVL +H RRLS SGDFGL L+HAAAHI VDPSD+SNDLDPRFT HFHRSLKVLT
Sbjct: 2203 AKQEAVGCLQRLQKQHAEQHAALEHQMEEEKRSREAKLRDRLAKKRXXXXXEMQQAALSE------------------------------------RNNRTLSAAAARAXATEA----------------VREAVEAAEQEEFKRKAQKLKELSLANEEKEKAALAGSSATSK------LAKKKAKAEAKKRELEAAQKVEEERLLAKHKEEVEAARAVAAPGWTGDIAWDEAVMVAMAEEPRAGETQFDREARVLKSVLEAGIVPEKKLGKVGPGRAGRRLGGTDKRIMV-------------------------------LSMNATDEERADAAADVDDDFAGRQQQMETSIIQ----------LELRQRQLQEIAGTFRAIAPESALERLQEINAARHKEELENFHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDQLNASQKEALLEQFKLDQAAELGALKAEEQSSKSKLEQKLAARRQKKTEEIRXXXXXXXXXXXXXXAQRLQEIERQTQLEDAAEVGALSASGSVS-ALKVDIDQAAIELARKALCTCNDEIGTYYQVL----------------MIQGRMVQRHNSVSGRRSLSGASXXXXXXXXXXXXXXXXXXXXXHISSKLEGIEGLISALKAAQGN-RLLGPGISAGDDGSTQVYRDAEDEATIPEGNDLQVIPRDKLPVQALARLEFGEHLLSVLGLADTVKLQVAKNLPPTDVLSQGSGTGG----RLNANAFRNSYLWEASTGVLNLHVRRLSSSGDFGLVLVHAAAHIHVDPSDMSNDLDPRFTQHFHRSLKVLT 2941
BLAST of mRNA_H-paniculata_contig1158.1016.1 vs. uniprot
Match: A0A835YHE9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHE9_9STRA) HSP 1 Score: 124 bits (312), Expect = 9.830e-30 Identity = 69/136 (50.74%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 2161 PDGDDLQVIPRDSLPVQALARVEFGEHLLSVLGL-ADTVTLQVAKNLPPALLARGHGGAGGGDGPANANAFRNTYLWDAGIGVLYVHARRLSRSGDFGLALIHAAAHISVD--PSDLSNDLDPRFTHHFHRSLKVL 2559
P G L+++PR +LP QAL+R++FGEHLL+VLGL A + ++VA++LPP P + NAFRN+YLWDA LYVHARRL SGDFGL L+HAAAH+ D P+ L +D P FT FH +L L
Sbjct: 2 PQGAVLELMPRAALPPQALSRLDFGEHLLAVLGLGASRMRVEVARSLPP-------------PPPDSGNAFRNSYLWDADARALYVHARRLGGSGDFGLVLVHAAAHLLSDAAPAHLHDDARPEFTRAFHGALATL 124
BLAST of mRNA_H-paniculata_contig1158.1016.1 vs. uniprot
Match: A0A7S1CP86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CP86_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 3.990e-15 Identity = 54/145 (37.24%), Postives = 73/145 (50.34%), Query Frame = 1
Query: 2131 YRDAEDIATVPDGDDLQVIPRDSLPVQALARVEFGEHLLSVLGL---ADTVTLQVAKNLPPALLARGHGGAGGGDGPANANAFRNTYLWDAGIGVLYVHARRLSRSGDFGLALIHAAAHISVDPSDLSNDLDPRFTHHFHRSLKV 2556
Y D D A P+G L + SL + R +FG LL +G+ D VTL A +LP A ANA+ N+Y +DA L+V +RL + G+F L+HA AHI +P D+SND DP FT F+R L +
Sbjct: 7 YIDPTDGAYAPEGR-LVEVDAASLRTRERLRFDFGLRLLRAVGMDTGRDAVTLVAASSLPKAA--------------GTANAYANSYNFDAATRRLFVRVQRLEQGGEFATVLMHALAHIKANPDDMSNDADPTFTAEFYRMLAL 136
BLAST of mRNA_H-paniculata_contig1158.1016.1 vs. uniprot
Match: A0A8J1XSF8_OWEFU (Ofus.G06630 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XSF8_OWEFU) HSP 1 Score: 70.5 bits (171), Expect = 1.640e-8 Identity = 56/182 (30.77%), Postives = 86/182 (47.25%), Query Frame = 1
Query: 2023 KLEDIEGLITALKAAQNNPNVSGQASTVGAAGWPEAYRDAEDIATVPDGDDLQVIPRDSLPVQALARVEFGEHLLSVLGL---ADTVTLQVAKNLPPALLARGHGGAGGGDGPANANAFRNTYLWDAGIGVLYVHARRLSRSGDFGLALIHAAAHISVDPSDLSNDLDPRFTHHFHRSLKVL 2559
++ D+E ++ K+A S V A + AY D +D GD + V D P Q + FG + VL A VTL +A NLP N NAFRN++ ++ +L++ R+ GDF + ++H AHISVD DL++D +P F F++SL+V+
Sbjct: 5040 QINDLEAMMD--KSAGGTGAAGSGPSKVQGADYSRAYLDIKDAQWSCSGDLVPVDLNDITPHQFVV-YRFGVFVSRVLRQLINAPEVTLLLASNLP--------------SNNYNNNAFRNSFFYEHARKILFIRRERMDSIGDFVVVILHCLAHISVD--DLTDDANPMFLRQFYKSLRVV 5202
BLAST of mRNA_H-paniculata_contig1158.1016.1 vs. uniprot
Match: A0A7S3LZT2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZT2_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 5.710e-8 Identity = 52/182 (28.57%), Postives = 94/182 (51.65%), Query Frame = 1
Query: 682 ITGVAWDKAVEAALAEPLRDGEQPRDREARVLKSVLEAGIVPDKKLGKCVEAVMSRRHDVETSDLLTAQYKERATKLTSSLGTLLTEKTRSRAEALRRLPENADAKERAEVT-AEVEDEFAGQQQQLEVHLMQEMEPIHLEKQLELRQKQLLEVAATVKRIAPEDAIQRLQELAAARQEEEL 1224
I + W + V+ +A+ G +RE + L +VP+K+L + V + RHD E + LL + ++ER L S++ ++ K+ ++ + + L N +E ++ A+++ E+ +Q + E ++E HL+ Q++LRQKQL E+A V ++ RLQ QEEEL
Sbjct: 363 IAKMQWSEKVQEVIAKAQSLGMSDLEREDYCFRETLAKNMVPEKQLSEAVNLIQKERHDAEMTVLLKSNFEERIAALKSAVEKVIEAKSNAKVDLVESLASNGATEESIQLEIAKLDAEYNKKQLEAEKAATGKLEDKHLKNQMDLRQKQLQEMANVVSVYTDPASLARLQNSTGRSQEEEL 544
BLAST of mRNA_H-paniculata_contig1158.1016.1 vs. uniprot
Match: UPI001604116B (uncharacterized protein LOC118417398 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001604116B) HSP 1 Score: 58.9 bits (141), Expect = 5.630e-5 Identity = 42/145 (28.97%), Postives = 71/145 (48.97%), Query Frame = 1
Query: 2131 YRDAEDIATVPDGDDLQVIPRDSLPVQALARVEFGEHLLSVLGL---ADTVTLQVAKNLPPALLARGHGGAGGGDGPANANAFRNTYLWDAGIGVLYVHARRLSRSGDFGLALIHAAAHISVDPSDLSNDLDPRFTHHFHRSLKV 2556
Y D +D + GD + V D P + FG + +L + VTL +A NLPP R NAFR+++L+ + +L++ R+ G+F + L+H AHI V+ DL++D +P F F++++K+
Sbjct: 9933 YLDIKDAQWLCSGDLMAVDINDLTPSHFVV-YRFGVFITQLLSRHLGSPEVTLLLASNLPPNDYER--------------NAFRHSFLYQSAKKILFIRKERMESVGEFVVVLLHCLAHIKVN--DLADDNNPYFLREFYKAIKL 10060
BLAST of mRNA_H-paniculata_contig1158.1016.1 vs. uniprot
Match: UPI0009E3911A (uncharacterized protein LOC110042058 isoform X3 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3911A) HSP 1 Score: 58.2 bits (139), Expect = 9.620e-5 Identity = 50/162 (30.86%), Postives = 76/162 (46.91%), Query Frame = 1
Query: 2080 NVSGQASTVGAAGWPEAYRDAEDIATVPDGDDLQVIPRDSLPVQALARVEFGEHLLSVLGLA-DT--VTLQVAKNLPPALLARGHGGAGGGDGPANANAFRNTYLWDAGIGVLYVHARRLSRSGDFGLALIHAAAHISVDPSDLSNDLDPRFTHHFHRSLKV 2556
N G+ GA G Y D +D + GD + V + P + FG + +L A DT VTL +A NLPP R NAFRN++ ++ VL+V R+ GDF + ++H +HI +D DL +D +P F F+++ +V
Sbjct: 8072 NNIGEGGVAGAKGG-RPYIDIKDAQWLCRGDLVPVDINELSPPNFVV-YRFGVFITQMLHKAMDTPEVTLLLASNLPPNNYER--------------NAFRNSFFYEHARRVLFVRQERMESVGDFLVVIMHCLSHIKID--DLVDDQNPLFLREFYKAFRV 8215 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1158.1016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1158.1016.1 >prot_H-paniculata_contig1158.1016.1 ID=prot_H-paniculata_contig1158.1016.1|Name=mRNA_H-paniculata_contig1158.1016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=854bp AAAAKEEAEATLRSLQQQHGEQSAALESQMEEERKSRETKLRDRLAKKRRback to top mRNA from alignment at H-paniculata_contig1158:15280..25034+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1158.1016.1 ID=mRNA_H-paniculata_contig1158.1016.1|Name=mRNA_H-paniculata_contig1158.1016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9755bp|location=Sequence derived from alignment at H-paniculata_contig1158:15280..25034+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1158:15280..25034+ >mRNA_H-paniculata_contig1158.1016.1 ID=mRNA_H-paniculata_contig1158.1016.1|Name=mRNA_H-paniculata_contig1158.1016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5124bp|location=Sequence derived from alignment at H-paniculata_contig1158:15280..25034+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |