mRNA_H-paniculata_contig11497.963.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11497.963.1
Unique NamemRNA_H-paniculata_contig11497.963.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig11497.963.1 vs. uniprot
Match: A0A6H5KN62_9PHAE (Glycine cleavage system P protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN62_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 3.480e-86
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:    1 KHKDNLAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVMPSGGEGSGTVVKKEGAVAAAPFGSAAILPISWMYIKMLGEPGLKKSTQ 444
            K+KD LAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPV+PSGGEG+G V K  GAVAAAPFGSAAILPISWMYIKMLGEPGLKKSTQ
Sbjct:  325 KNKDKLAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVIPSGGEGAGVVAKTTGAVAAAPFGSAAILPISWMYIKMLGEPGLKKSTQ 472
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BLAST of mRNA_H-paniculata_contig11497.963.1 vs. uniprot
Match: D7FRW0_ECTSI (Glycine cleavage system P protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW0_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 1.520e-82
Identity = 138/148 (93.24%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:    1 KHKDNLAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVMPSGGEGSGTVVKKEGAVAAAPFGSAAILPISWMYIKMLGEPGLKKSTQ 444
            K+KD LAALMVTYPSTYGVFEEGIKEIC+ITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPV+PSGGEG+G V K  GA+AAAPFGSAAILPISWMYIKMLGEPGLKKSTQ
Sbjct:  671 KNKDKLAALMVTYPSTYGVFEEGIKEICKITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVIPSGGEGAGVVPKTTGAIAAAPFGSAAILPISWMYIKMLGEPGLKKSTQ 818
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BLAST of mRNA_H-paniculata_contig11497.963.1 vs. uniprot
Match: A0A835ZE30_9STRA (Glycine cleavage system P protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE30_9STRA)

HSP 1 Score: 264 bits (674), Expect = 8.850e-75
Identity = 126/148 (85.14%), Postives = 137/148 (92.57%), Query Frame = 1 
Query:    1 KHKDNLAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVMPSGGEGSGTVVKKEGAVAAAPFGSAAILPISWMYIKMLGEPGLKKSTQ 444
            KHKDNLAALM+TYPSTYGVFEEGIK+I    H +GGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVG+IGV  +LAPFLPGHPV+P+GGEGSG V K  GAV+AAPFGSAAILPISWMYIKMLGEPGL+K+T+
Sbjct:  669 KHKDNLAALMITYPSTYGVFEEGIKDITNYIHKSGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGSIGVNAKLAPFLPGHPVIPTGGEGSGVVAKTSGAVSAAPFGSAAILPISWMYIKMLGEPGLRKATE 816
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BLAST of mRNA_H-paniculata_contig11497.963.1 vs. uniprot
Match: A0A835ZCN8_9STRA (Glycine cleavage system P protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN8_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.320e-73
Identity = 125/148 (84.46%), Postives = 136/148 (91.89%), Query Frame = 1 
Query:    1 KHKDNLAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVMPSGGEGSGTVVKKEGAVAAAPFGSAAILPISWMYIKMLGEPGLKKSTQ 444
            KHKDNLAALM+TYPSTYGVFEEGIK+I    H  GGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVG+IGV  +LAPFLPGHPV+P+GGEG+G V K  GAV+AAPFGSAAILPISWMYIKMLGEPGL+K+T+
Sbjct:  680 KHKDNLAALMITYPSTYGVFEEGIKDITSHVHKCGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGSIGVNAKLAPFLPGHPVIPTGGEGAGVVAKTSGAVSAAPFGSAAILPISWMYIKMLGEPGLRKATE 827
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BLAST of mRNA_H-paniculata_contig11497.963.1 vs. uniprot
Match: A0A7S2C4K9_9STRA (Glycine cleavage system P protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C4K9_9STRA)

HSP 1 Score: 246 bits (629), Expect = 1.680e-68
Identity = 121/148 (81.76%), Postives = 127/148 (85.81%), Query Frame = 1 
Query:    1 KHKDNLAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVMPSGGEGSGTVVKKEGAVAAAPFGSAAILPISWMYIKMLGEPGLKKSTQ 444
            KH DNLAALMVTYPSTYGVFEEGI +IC   HD+GG VYMDGANMNAQV LT+PG IGADVCHLNLHKTFCIPHGGGGPGVG+IGV   LAPFLPGH V+P  GEG   VVK  GA+AAAPFGSAAILPISWMYIKMLGE GL KSTQ
Sbjct:  666 KHSDNLAALMVTYPSTYGVFEEGIVDICDKIHDHGGQVYMDGANMNAQVGLTAPGFIGADVCHLNLHKTFCIPHGGGGPGVGSIGVKSHLAPFLPGHAVVPCSGEGDNVVVKSGGAIAAAPFGSAAILPISWMYIKMLGEAGLTKSTQ 813
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BLAST of mRNA_H-paniculata_contig11497.963.1 vs. uniprot
Match: A0A7S2SFF7_9STRA (Glycine cleavage system P protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFF7_9STRA)

HSP 1 Score: 242 bits (617), Expect = 9.490e-67
Identity = 118/148 (79.73%), Postives = 129/148 (87.16%), Query Frame = 1 
Query:    1 KHKDNLAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVMPSGGEGSGTVVKKEGAVAAAPFGSAAILPISWMYIKMLGEPGLKKSTQ 444
            KH ++LAALMVTYPSTYGVFEEGI +IC I H++GG VYMDGANMNAQVALTSPG IGADVCHLNLHKTFCIPHGGGGPGVG+IGV   LAP LPGH V+   GEG+  V K EGA+AAAPFGSAAILPISWMYIKMLGEPGL ++TQ
Sbjct:  691 KHSNDLAALMVTYPSTYGVFEEGIVDICNIIHEHGGQVYMDGANMNAQVALTSPGFIGADVCHLNLHKTFCIPHGGGGPGVGSIGVAAHLAPHLPGHNVVACSGEGANVVSKDEGAIAAAPFGSAAILPISWMYIKMLGEPGLLRATQ 838
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BLAST of mRNA_H-paniculata_contig11497.963.1 vs. uniprot
Match: A0A7S0PAQ8_CAFRO (Glycine dehydrogenase (aminomethyl-transferring) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PAQ8_CAFRO)

HSP 1 Score: 233 bits (595), Expect = 3.430e-66
Identity = 111/147 (75.51%), Postives = 124/147 (84.35%), Query Frame = 1 
Query:    1 KHKDNLAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVMPSGGEGSGTVVKKEGAVAAAPFGSAAILPISWMYIKMLGEPGLKKST 441
            KHKDNLAA MVTYPST+GVFE GI ++C   H+ GG VYMDGANMNAQV LTSPG IGADVCHLNLHKTFCIPHGGGGPGVG+IGV   LAPFLPGH + P+GG GS  V K+ GAV+A+PFGSA ILPISWMYI+MLG  GL+K+T
Sbjct:  235 KHKDNLAAFMVTYPSTFGVFEGGIIDMCDAIHERGGQVYMDGANMNAQVGLTSPGRIGADVCHLNLHKTFCIPHGGGGPGVGSIGVAEHLAPFLPGHQISPTGGTGSNIVAKRAGAVSASPFGSALILPISWMYIRMLGPDGLRKAT 381
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BLAST of mRNA_H-paniculata_contig11497.963.1 vs. uniprot
Match: A0A7S2XXQ1_9STRA (Glycine cleavage system P protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ1_9STRA)

HSP 1 Score: 238 bits (606), Expect = 2.760e-65
Identity = 116/147 (78.91%), Postives = 124/147 (84.35%), Query Frame = 1 
Query:    1 KHKDNLAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVMPSGGEGSGTVVKKEGAVAAAPFGSAAILPISWMYIKMLGEPGLKKST 441
            KH DNLAALM+TYPSTYGVFEEG+KEI    H  GG VYMDGANMNAQV LTSPG IGADVCHLNLHKTFCIPHGGGGPGVG+IGV   LAP+LPGH V+ +GGEG     K +GAVAAAPFGSAAILPISWMYIKMLG  GLKK+T
Sbjct:  679 KHADNLAALMITYPSTYGVFEEGVKEIIDHVHSKGGQVYMDGANMNAQVGLTSPGTIGADVCHLNLHKTFCIPHGGGGPGVGSIGVAKHLAPYLPGHNVVKTGGEGDNVAAKVDGAVAAAPFGSAAILPISWMYIKMLGGEGLKKAT 825
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BLAST of mRNA_H-paniculata_contig11497.963.1 vs. uniprot
Match: A0A2D4BT96_PYTIN (Glycine cleavage system P protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BT96_PYTIN)

HSP 1 Score: 234 bits (598), Expect = 2.220e-64
Identity = 111/148 (75.00%), Postives = 128/148 (86.49%), Query Frame = 1 
Query:    1 KHKDNLAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVMPSGGEGSGTVVKKEGAVAAAPFGSAAILPISWMYIKMLGEPGLKKSTQ 444
            KH   L+ALM+TYPST+GVFEEG+K++C + H +GG VYMDGANMNAQVAL +PG+IGADVCHLNLHKTFCIPHGGGGPGVG+IGV   LAP LPGH V+P GGEG+ TV+K E AV+AAPFGSA ILPISWMYI MLGE GLK++TQ
Sbjct:  625 KHAHELSALMITYPSTFGVFEEGVKDMCDLIHRHGGQVYMDGANMNAQVALCNPGNIGADVCHLNLHKTFCIPHGGGGPGVGSIGVAAHLAPHLPGHVVVPCGGEGNKTVIKSESAVSAAPFGSAGILPISWMYIHMLGESGLKQATQ 772
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BLAST of mRNA_H-paniculata_contig11497.963.1 vs. uniprot
Match: K3W837_GLOUD (Glycine cleavage system P protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W837_GLOUD)

HSP 1 Score: 234 bits (597), Expect = 4.780e-64
Identity = 111/147 (75.51%), Postives = 127/147 (86.39%), Query Frame = 1 
Query:    1 KHKDNLAALMVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVMPSGGEGSGTVVKKEGAVAAAPFGSAAILPISWMYIKMLGEPGLKKST 441
            KH   L+ALM+TYPST+GVFEEG+K++C++ HDNGG VYMDGANMNAQVAL +PG+IGADVCHLNLHKTFCIPHGGGGPGVG+IGV   LAP+LPGH V P GGEG  TV K + AV+AAPFGSA ILPISWMYI MLGE GLK++T
Sbjct:  680 KHAHELSALMITYPSTFGVFEEGVKDMCKLIHDNGGQVYMDGANMNAQVALCNPGNIGADVCHLNLHKTFCIPHGGGGPGVGSIGVAKHLAPYLPGHAVAPVGGEGIETVKKTDSAVSAAPFGSAGILPISWMYIHMLGEAGLKQAT 826
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11497.963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KN62_9PHAE3.480e-8694.59Glycine cleavage system P protein n=1 Tax=Ectocarp... [more]
D7FRW0_ECTSI1.520e-8293.24Glycine cleavage system P protein n=1 Tax=Ectocarp... [more]
A0A835ZE30_9STRA8.850e-7585.14Glycine cleavage system P protein n=1 Tax=Tribonem... [more]
A0A835ZCN8_9STRA1.320e-7384.46Glycine cleavage system P protein n=1 Tax=Tribonem... [more]
A0A7S2C4K9_9STRA1.680e-6881.76Glycine cleavage system P protein n=1 Tax=Dictyoch... [more]
A0A7S2SFF7_9STRA9.490e-6779.73Glycine cleavage system P protein n=1 Tax=Rhizochr... [more]
A0A7S0PAQ8_CAFRO3.430e-6675.51Glycine dehydrogenase (aminomethyl-transferring) n... [more]
A0A7S2XXQ1_9STRA2.760e-6578.91Glycine cleavage system P protein n=1 Tax=Fibrocap... [more]
A0A2D4BT96_PYTIN2.220e-6475.00Glycine cleavage system P protein n=1 Tax=Pythium ... [more]
K3W837_GLOUD4.780e-6475.51Glycine cleavage system P protein n=1 Tax=Globispo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11497contigH-paniculata_contig11497:1151..4664 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score278.1
Seed ortholog evalue2.3e-72
Seed eggNOG ortholog2880.D7FRW0
Preferred nameGLDC
KEGG rclassRC00022,RC00929,RC02834,RC02880
KEGG koko:K00281
KEGG ReactionR01221,R03425
KEGG Pathwayko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200
KEGG ModuleM00532
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005759,GO:0005886,GO:0005960,GO:0006082,GO:0006091,GO:0006520,GO:0006544,GO:0006546,GO:0006730,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0010033,GO:0010243,GO:0014070,GO:0014075,GO:0016020,GO:0016054,GO:0016491,GO:0016594,GO:0016597,GO:0016638,GO:0016639,GO:0016642,GO:0017144,GO:0019464,GO:0019752,GO:0019842,GO:0019899,GO:0022900,GO:0030170,GO:0031406,GO:0031974,GO:0032991,GO:0033993,GO:0034097,GO:0036094,GO:0036255,GO:0042133,GO:0042135,GO:0042165,GO:0042221,GO:0042737,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046983,GO:0047960,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0055114,GO:0060359,GO:0065007,GO:0065008,GO:0070013,GO:0070279,GO:0070280,GO:0070542,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901698,GO:1901700,GO:1902494,GO:1903442,GO:1990204,GO:1990823,GO:1990830
EggNOG free text desc.glycine dehydrogenase (decarboxylating) activity
EggNOG OGsCOG1003@1,KOG2040@2759
Ec32 ortholog descriptionGlycine dehydrogenase (decarboxylating)
Ec32 orthologEc-23_004150.1
EC1.4.4.2
COG Functional cat.E
BiGG ReactioniRC1080.CRv4_Au5_s12_g3759_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size1501
Cds size426
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11497.963.1prot_H-paniculata_contig11497.963.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11497 1178..2400 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928854.940762-UTR-H-paniculata_contig11497:1150..11771622928854.940762-UTR-H-paniculata_contig11497:1150..1177Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11497 1151..1177 +
1691480646.3170133-UTR-H-paniculata_contig11497:1150..11771691480646.3170133-UTR-H-paniculata_contig11497:1150..1177Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11497 1151..1177 +
1622928855.0109835-UTR-H-paniculata_contig11497:2400..24111622928855.0109835-UTR-H-paniculata_contig11497:2400..2411Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11497 2401..2411 +
1691480646.3563874-UTR-H-paniculata_contig11497:2400..24111691480646.3563874-UTR-H-paniculata_contig11497:2400..2411Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11497 2401..2411 +
1622928855.0278862-UTR-H-paniculata_contig11497:2695..28601622928855.0278862-UTR-H-paniculata_contig11497:2695..2860Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11497 2696..2860 +
1691480646.3634443-UTR-H-paniculata_contig11497:2695..28601691480646.3634443-UTR-H-paniculata_contig11497:2695..2860Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11497 2696..2860 +
1622928855.0437598-UTR-H-paniculata_contig11497:3285..33801622928855.0437598-UTR-H-paniculata_contig11497:3285..3380Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11497 3286..3380 +
1691480646.3705528-UTR-H-paniculata_contig11497:3285..33801691480646.3705528-UTR-H-paniculata_contig11497:3285..3380Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11497 3286..3380 +
1622928855.055266-UTR-H-paniculata_contig11497:3887..46641622928855.055266-UTR-H-paniculata_contig11497:3887..4664Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11497 3888..4664 +
1691480646.3791091-UTR-H-paniculata_contig11497:3887..46641691480646.3791091-UTR-H-paniculata_contig11497:3887..4664Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11497 3888..4664 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928854.95907-CDS-H-paniculata_contig11497:1177..12611622928854.95907-CDS-H-paniculata_contig11497:1177..1261Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11497 1178..1261 +
1691480646.3269713-CDS-H-paniculata_contig11497:1177..12611691480646.3269713-CDS-H-paniculata_contig11497:1177..1261Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11497 1178..1261 +
1622928854.9734032-CDS-H-paniculata_contig11497:1743..19261622928854.9734032-CDS-H-paniculata_contig11497:1743..1926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11497 1744..1926 +
1691480646.3343778-CDS-H-paniculata_contig11497:1743..19261691480646.3343778-CDS-H-paniculata_contig11497:1743..1926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11497 1744..1926 +
1622928854.9910605-CDS-H-paniculata_contig11497:2241..24001622928854.9910605-CDS-H-paniculata_contig11497:2241..2400Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11497 2242..2400 +
1691480646.3490376-CDS-H-paniculata_contig11497:2241..24001691480646.3490376-CDS-H-paniculata_contig11497:2241..2400Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11497 2242..2400 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11497.963.1

>prot_H-paniculata_contig11497.963.1 ID=prot_H-paniculata_contig11497.963.1|Name=mRNA_H-paniculata_contig11497.963.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp
MVTYPSTYGVFEEGIKEICQITHDNGGLVYMDGANMNAQVALTSPGHIGA
DVCHLNLHKTFCIPHGGGGPGVGTIGVVPRLAPFLPGHPVMPSGGEGSGT
VVKKEGAVAAAPFGSAAILPISWMYIKMLGEPGLKKSTQAR*
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mRNA from alignment at H-paniculata_contig11497:1151..4664+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11497.963.1 ID=mRNA_H-paniculata_contig11497.963.1|Name=mRNA_H-paniculata_contig11497.963.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3514bp|location=Sequence derived from alignment at H-paniculata_contig11497:1151..4664+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGCACAAGGATAACCTGGCCGCTCTTATGGTAACCTACCCATCCACGTA
CGGTGTGTTCGAGGAGGGCATCAAGGAGATCTGCCAGATCACCCACGACA
ACGGCGGCTTGGTGCGTTCGCTGTACACGTGAATATAGTGGAAAAACAAT
GGCAAATTCCCATACTAATAGTACCTCTATTCCGTAAGTCTGGCCTTTAA
CGATATTCTGTAAATATCTTTCGCAAGTTTGGGTTTCGTGAAAAATAAAG
GATGTCGTTCCAAAGCCCACACGTCCATCTTGCATTTAGATATCTTCAGG
ATGTCTGAGGATCGAGGATCTCAATACGTTCGTGTTTCGAAATGGTGAAT
TTTGTGGAAACAGTCCAAAAAGCCTAAATTGGCTGAAAACCATGGTTGGT
AATTGATGATCTTCGGGTAAGAAATTATTTATTGCTTTGTATCCCTTCGG
GGTTTCATACGACATGGTACAAAAATTCGCTGTTCATTACTATAATCCTC
CTCATCAATCCACCAATTGAAGACCGCCTTGACTGGTTTTTGTGAAAATT
TACACCCTAGCGAATCTTGCGTCGACCTGTGGTGTGCTATCAGGTGTACA
TGGACGGAGCGAACATGAACGCGCAGGTGGCCCTGACCAGCCCCGGACAC
ATCGGCGCGGACGTATGCCACCTAAACCTTCACAAGACCTTCTGCATCCC
CCACGGAGGCGGTGGGCCCGGCGTGGGAACGATTGGTGTTGTGCCCCGAC
TCGCTCCTTTCCTTCCCGGACACCCGGTGTGTCTCCTGATTTCGTTTGGT
ATTTTATTTCTTCTTTTCTCCACGGTATACTGAGCCGTAGCTCGGTACGT
CTTGCTTTCATGGTGATTGATGCCTTCGTTTATGTGCACAAACGCGTTAA
GCGTCGAGAAGGTATTTTACGATCCATCCCAAGTTCATGCTCTTATGTTG
GTCGGGATTCGCTCATGGAAATACTCGAATGTGGTTGGGGATTCGCTACG
AATAGCTGTGATATTTTTGCCGGATACATGACTATTTGGCCGGCGTGACG
CACGATGGCGCTTTTGCTGTGACATGATCACCATCACCCAGGTGATGCCC
TCGGGCGGCGAGGGTTCCGGTACCGTCGTAAAAAAGGAGGGGGCTGTTGC
TGCCGCTCCGTTCGGGAGCGCGGCCATTCTACCCATCTCGTGGATGTACA
TCAAGATGCTTGGGGAGCCCGGACTGAAGAAATCGACCCAGGCAAGATAA
AGAAAAAAAACGTTGAAAGGGAAGAATCTCGGGGGTTGGGGAGTTCTCGG
CATGGACCGTACGTCAGTTGCTGTCTCGTACACGTGGACACTGTGCACTG
CTGATAATGCTTTAGCAGGGTATGCTTGTGACGGCTACTGGACGTTGAGT
AGTTTGTAGTGCTTCACGTGCGTCCAACTGATACCAGGTGGAGTAGATTT
TGCTTCGGTTTCCGTCGGCATCTACCGTCGCTGCCTCCGCAATCGCACCC
CATTGATACCACGACATTTCGTTTTCGCCTCTCAACTTCTCGCAGCTGGC
CATCCTCAACGCGAACTATATGGCGGCTAAGCTTGAGAAGCACTACAACA
TTCTGTACAGGGGACGTGACGGCCTGAGCGCGCACGAATTCATCGTGGAC
CTCCGGCCGTTTAAGGCTAGCACGGGAGTTGTGGAGGAAGACGTTGCGAA
GCGCTTGCAGGTGAGTGTAGGAGTGTTTCACTACTGGGCATGGGTATGGG
TGTTTCGTGTGAAAATATCAAGATGACCCCCCATTCAAAGGAACCTTTCA
AGCTACTTGGTGGCATTGCATTCAGCAGGCCGTGCACGTGGTCCATGCTT
GGTTTGCTTCTGATAATCTGAAGTTTCGATCGTCCACGTCTTGAACAAAA
GAGTAAGCGGAGTTTTTGTGGTGTTTCGTGATCAACAGATGTAGTAGCTA
GGTCCAATCGTCCGTGCATCTTATGGTGTCAACCGGTCGCAATCAGTTGC
CCAGAATTTTCGTTTAGGGTAAGGTTGGATGCCCATCATTGTGTCGCATG
AGTCCGCTGATGAAAACTGTCGCGAATCATGACCGCCCGAAATATTCCCC
CCGCGTTTTGCGCTTCACTCGTCACCGTTGTCCAGGACTACGGATTCCAC
AGTCCAACCATGTCGTGGCCTGTACCGGGCACATTAATGATTGAGCCGAC
CGAATCGGAGGACAAGGCAGAGCTAGACAGGTGAGACGTATCTGTTGTGT
CTTCGTCCTTGAACGACGTACATTTTGTGTATGTACCTTACAGTCTGGAA
CGCCGTCGTCACTACTGCTGCATTCGTTTCCGGAATATGATATTTGTTTT
CATGGTGAGCGCCATATGACGTCGAGGGTACGGGCGGGGAAGAAGCTGAA
TTAACCTGGTGACGTCCGCGTGGATATTGGATGTAATGTTGGGTTAATGA
CTGTACTGACCGATTCCCGCACCCTCGGGATGATTCCAACATGGGAGGGC
TACGATTAGTGGGGCAAGAATGGACCTCTCCGTCCGCTTCCCCCTTCGGG
CTGCACCTCCTCCACATGGCAACGAAAGAGCAACAAACTCTCACGCAAAG
CCACGTGGTGGTAAAAATGGTGTGTGTCACAGGCTATGGAATCTTATCCA
AACCAGTTCGATTTTGTCCTCGTCTTACGCGGTCATTTTTTGGTTCTGTT
ATTTGGATTTCGAAATTGTGTTTTGGAATTTTTGCAGGTTCTGCTACGCT
ATGATCAAGATTAGGGAGGAAATCGAGGACATCGCGTCAGGCCGCACCCC
GATGGAGAAGAGGTGAGCCATGAGCGTGTAAATGTGATGATCGCGGCGAT
AAAACCTAGACGTGGTCTCCGGCCGAATATGGCCGCGCGGCGTGGACAGG
TCAAACACTGAGGTGCCGCTCCTTCCGCCACTCTGAAGTTTTTACTTCGT
ACCCGTGGGTAGATTTGGGCAATGGGCTTCGGCTGTCTGTCCAGGGGCCG
AGCATATTATGGTGGTTCTGTCTGTGATTCACCCCTCTGTTAATATATTT
TTGCTGAACCGTGTACGCAACTCAAGTTTGAGGGCAGCTGTACAATTCTT
GGTAGTACACGGATTTTTTCATATGAGCTTGAGTGCATCCCCCCGCGCGC
GCTCTGAGTGGTATTATCTTGCGCGTGCCAATAACGGGGGACTAAAGTTC
GGTATATGTTGACGTCTGTCACATAGTGCCAGATTTCGTCCTGCGTGAAA
GCAGGGAGACCTCTACAGGGTATGGCGTGCACCGCATCGCCGTGGCGCCG
AATATTGGCGTCGACCTTCGCGGGGCTATGATGTGCACCCTCTCGATTGC
CGTTGATTTTGCTCAACATTCCTCTTGTGTACTTCTTATCCCTGGCGTCC
CCGCCCGTGGCCCTGCGTGTGGCTCCTTGGTCGGTTCCTGACTGGCTAAT
TCGTAGCCCCCTGAAGGCGGCACCGCACACGTGGGAGACGTGCTTCGAGG
ACGAGTGGGACAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig11497:1151..4664+

>mRNA_H-paniculata_contig11497.963.1 ID=mRNA_H-paniculata_contig11497.963.1|Name=mRNA_H-paniculata_contig11497.963.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at H-paniculata_contig11497:1151..4664+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTAACCTACCCATCCACGTACGGTGTGTTCGAGGAGGGCATCAAGGA
GATCTGCCAGATCACCCACGACAACGGCGGCTTGATGGTAACCTACCCAT
CCACGTACGGTGTGTTCGAGGAGGGCATCAAGGAGATCTGCCAGATCACC
CACGACAACGGCGGCTTGGTGTACATGGACGGAGCGAACATGAACGCGCA
GGTGGCCCTGACCAGCCCCGGACACATCGGCGCGGACGTATGCCACCTAA
ACCTTCACAAGACCTTCTGCATCCCCCACGGAGGCGGTGGGCCCGGCGTG
GGAACGATTGGTGTTGTGCCCCGACTCGCTCCTTTCCTTCCCGGACACCC
GGTGTACATGGACGGAGCGAACATGAACGCGCAGGTGGCCCTGACCAGCC
CCGGACACATCGGCGCGGACGTATGCCACCTAAACCTTCACAAGACCTTC
TGCATCCCCCACGGAGGCGGTGGGCCCGGCGTGGGAACGATTGGTGTTGT
GCCCCGACTCGCTCCTTTCCTTCCCGGACACCCGGTGATGCCCTCGGGCG
GCGAGGGTTCCGGTACCGTCGTAAAAAAGGAGGGGGCTGTTGCTGCCGCT
CCGTTCGGGAGCGCGGCCATTCTACCCATCTCGTGGATGTACATCAAGAT
GCTTGGGGAGCCCGGACTGAAGAAATCGACCCAGGCAAGATAAGTGATGC
CCTCGGGCGGCGAGGGTTCCGGTACCGTCGTAAAAAAGGAGGGGGCTGTT
GCTGCCGCTCCGTTCGGGAGCGCGGCCATTCTACCCATCTCGTGGATGTA
CATCAAGATGCTTGGGGAGCCCGGACTGAAGAAATCGACCCAGGCAAGAT
AA
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