mRNA_H-paniculata_contig11455.946.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11455.946.1 vs. uniprot
Match: D7FLB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB7_ECTSI) HSP 1 Score: 137 bits (345), Expect = 2.180e-40 Identity = 69/93 (74.19%), Postives = 80/93 (86.02%), Query Frame = 1 Query: 1 MSGNGFLIRVKEIPADQALLPTESDIKKVGLKTSVRYTAVQAGMLALLWTLKSFKKTALFFPSVIGLLIVVRLAALPKMFSPKELDQLDAAVG 279 MSGN FL+R KE+ D+ LL +ESDIKKVG T+ +YTAVQA ML LLWTLKSF++TALFFPSVIGLLIVVRL ALPKMF+PK+L +LDAAVG Sbjct: 1 MSGNAFLVRCKEVFVDRKLLRSESDIKKVGFGTAAKYTAVQAAMLTLLWTLKSFERTALFFPSVIGLLIVVRLVALPKMFTPKDLSELDAAVG 93
BLAST of mRNA_H-paniculata_contig11455.946.1 vs. uniprot
Match: A0A6H5KFP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP7_9PHAE) HSP 1 Score: 137 bits (345), Expect = 5.810e-37 Identity = 69/93 (74.19%), Postives = 80/93 (86.02%), Query Frame = 1 Query: 1 MSGNGFLIRVKEIPADQALLPTESDIKKVGLKTSVRYTAVQAGMLALLWTLKSFKKTALFFPSVIGLLIVVRLAALPKMFSPKELDQLDAAVG 279 MSG FL+R KE+ D+ LL +ESDIKKVG T+ +YTAVQAGML LLWTLKSF++TALFFPSVIGLLIVVRL ALPKMF+PK+L +LDAAVG Sbjct: 313 MSGTAFLVRCKEVFVDRKLLRSESDIKKVGFGTAAKYTAVQAGMLTLLWTLKSFERTALFFPSVIGLLIVVRLVALPKMFTPKDLSELDAAVG 405
BLAST of mRNA_H-paniculata_contig11455.946.1 vs. uniprot
Match: A0A835ZK65_9STRA (HCO3 transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK65_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.050e-33 Identity = 63/93 (67.74%), Postives = 78/93 (83.87%), Query Frame = 1 Query: 1 MSGNGFLIRVKEIPADQALLPTESDIKKVGLKTSVRYTAVQAGMLALLWTLKSFKKTALFFPSVIGLLIVVRLAALPKMFSPKELDQLDAAVG 279 MSGN FL+R+KE+ ADQ+LL S +KKVG KT++ YT+VQ GML LLWTLKSF++TALFFPSVIGLL++VRLA LPK+FS LD+LD+AV Sbjct: 322 MSGNEFLLRIKELCADQSLLKPNSSVKKVGYKTALGYTSVQLGMLGLLWTLKSFRQTALFFPSVIGLLVLVRLAVLPKLFSKDALDELDSAVA 414
BLAST of mRNA_H-paniculata_contig11455.946.1 vs. uniprot
Match: A0A836CJA6_9STRA (Bicarbonate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA6_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.840e-23 Identity = 54/93 (58.06%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 1 MSGNGFLIRVKEIPADQALLPTESDIKKVGLKTSVRYTAVQAGMLALLWTLKSFKKTALFFPSVIGLLIVVRLAALPKMFSPKELDQLDAAVG 279 M GNGF R+ ++ D L+ + S +K VG T++RYTAVQA MLALLWTLKSF +TAL FPSVIGLL+V+RL LPK+FS + L LD V Sbjct: 423 MCGNGFFERITDLCMDPKLMGSGSVVKAVGRGTALRYTAVQALMLALLWTLKSFSQTALLFPSVIGLLVVMRLTVLPKLFSDRSLRLLDPPVA 515
BLAST of mRNA_H-paniculata_contig11455.946.1 vs. uniprot
Match: A0A7R9UCL0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCL0_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.400e-20 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 1 MSGNGFLIRVKEIPADQALLPTESDIKKVGLKTSVRYTAVQAGMLALLWTLKSFKKTALFFPSVIGLLIVVRLAALPKMFSPKELDQLDAAVG 279 MSGN FL R+KE+ D+ L +S I++VG RYTA+Q L LW +KSF TALFFPSVIGLL+++R A LP++FS ++L LD A Sbjct: 415 MSGNDFLYRIKELAMDKKFLDEDSFIQRVGRSVVFRYTAIQVLCLMGLWAMKSFNSTALFFPSVIGLLVMIRKALLPRLFSKEDLRVLDRAAS 507
BLAST of mRNA_H-paniculata_contig11455.946.1 vs. uniprot
Match: A0A0G4H159_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H159_VITBC) HSP 1 Score: 93.2 bits (230), Expect = 4.180e-20 Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = 1 Query: 1 MSGNGFLIRVKEIPADQALLPTESDIKKVGLKTSVRYTAVQAGMLALLWTLKSFKKTALFFPSVIGLLIVVRLAALPKMFSPKELDQLDAAVG 279 M+GN FL R+ + AD+ LLP ES +++ ++YTAVQ LA L+TLKS + TALFFPSVIG L+V+R LP++FS ELD LDA V Sbjct: 739 MTGNDFLYRIGDTFADRELLPFESKFRQLPRSVVIKYTAVQLACLAGLFTLKSVRSTALFFPSVIGALMVIRAVVLPRLFSRHELDTLDATVA 831
BLAST of mRNA_H-paniculata_contig11455.946.1 vs. uniprot
Match: A0A7S2F9D6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F9D6_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 7.650e-20 Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 1 MSGNGFLIRVKEIPADQALLPTESDIKKVGLKTSVRYTAVQAGMLALLWTLKSFKKTALFFPSVIGLLIVVRLAALPKMFSPKELDQLD 267 M+GN FL R++ + D LP + ++ +G ++YT +Q G LA+LW LKSFK TALFFPSVIGLL+V+R ALPK+F+ EL LD Sbjct: 300 MTGNSFLRRIQGLFLDMEKLPPTASVRLLGRYPVIKYTGIQMGCLAILWGLKSFKPTALFFPSVIGLLVVIRRFALPKLFNEDELAILD 388
BLAST of mRNA_H-paniculata_contig11455.946.1 vs. uniprot
Match: A0A6U4I2T6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4I2T6_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 7.680e-20 Identity = 44/89 (49.44%), Postives = 65/89 (73.03%), Query Frame = 1 Query: 1 MSGNGFLIRVKEIPADQALLPTESDIKKVGLKTSVRYTAVQAGMLALLWTLKSFKKTALFFPSVIGLLIVVRLAALPKMFSPKELDQLD 267 MSGN FL R+KE+ D L +++ +++VG KT+ +YTA+Q LA LW++KSF TALFFPSVIG+L+++R LP++F ++L LD Sbjct: 583 MSGNDFLYRIKELCKDSKFLESDAFVRQVGYKTTAKYTAIQVACLAGLWSVKSFNSTALFFPSVIGVLVLIRKFLLPRLFLREDLVVLD 671
BLAST of mRNA_H-paniculata_contig11455.946.1 vs. uniprot
Match: A0A7S3XU58_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU58_HETAK) HSP 1 Score: 90.1 bits (222), Expect = 2.850e-19 Identity = 46/93 (49.46%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 1 MSGNGFLIRVKEIPADQALLPTESDIKKVGLKTSVRYTAVQAGMLALLWTLKSFKKTALFFPSVIGLLIVVRLAALPKMFSPKELDQLDAAVG 279 M+GNGFL R+K + A++A LP + ++ G ++RYTAVQA L LW LK TAL+FPSVIG+L+ +R+ LP +FS +EL LD++VG Sbjct: 300 MTGNGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVG 392
BLAST of mRNA_H-paniculata_contig11455.946.1 vs. uniprot
Match: A0A7S3XU83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU83_HETAK) HSP 1 Score: 90.1 bits (222), Expect = 4.660e-19 Identity = 46/93 (49.46%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 1 MSGNGFLIRVKEIPADQALLPTESDIKKVGLKTSVRYTAVQAGMLALLWTLKSFKKTALFFPSVIGLLIVVRLAALPKMFSPKELDQLDAAVG 279 M+GNGFL R+K + A++A LP + ++ G ++RYTAVQA L LW LK TAL+FPSVIG+L+ +R+ LP +FS +EL LD++VG Sbjct: 435 MTGNGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVG 527 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11455.946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11455.946.1 >prot_H-paniculata_contig11455.946.1 ID=prot_H-paniculata_contig11455.946.1|Name=mRNA_H-paniculata_contig11455.946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=94bp MSGNGFLIRVKEIPADQALLPTESDIKKVGLKTSVRYTAVQAGMLALLWTback to top mRNA from alignment at H-paniculata_contig11455:2977..5641+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11455.946.1 ID=mRNA_H-paniculata_contig11455.946.1|Name=mRNA_H-paniculata_contig11455.946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2665bp|location=Sequence derived from alignment at H-paniculata_contig11455:2977..5641+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11455:2977..5641+ >mRNA_H-paniculata_contig11455.946.1 ID=mRNA_H-paniculata_contig11455.946.1|Name=mRNA_H-paniculata_contig11455.946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=564bp|location=Sequence derived from alignment at H-paniculata_contig11455:2977..5641+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |