mRNA_H-paniculata_contig11455.945.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11455.945.1 vs. uniprot
Match: A0A6H5KFP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP7_9PHAE) HSP 1 Score: 199 bits (507), Expect = 2.010e-60 Identity = 107/129 (82.95%), Postives = 111/129 (86.05%), Query Frame = 1 Query: 1 LQSLFFLDQNISARVVNSPRHKMVKGAAYHQDMAVLGLITGALSLIGLPWQCAATVQSLNHVRQMATLETSGVSSTTSKRSEEIASIFETRATGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK 387 L SLFFLDQNISARVVNSPRHKM KGAAYHQDM VLG+ITG LS++GLPWQCAATVQSLNHVRQMAT E + S RSE I SI ETR TGFCVHALVLGSLALLPQLGKIPMAVVSGIFL LGRK Sbjct: 185 LTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPA--MSAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLDLGRK 311
BLAST of mRNA_H-paniculata_contig11455.945.1 vs. uniprot
Match: D7G110_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G110_ECTSI) HSP 1 Score: 203 bits (516), Expect = 1.220e-59 Identity = 107/129 (82.95%), Postives = 113/129 (87.60%), Query Frame = 1 Query: 1 LQSLFFLDQNISARVVNSPRHKMVKGAAYHQDMAVLGLITGALSLIGLPWQCAATVQSLNHVRQMATLETSGVSSTTSKRSEEIASIFETRATGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK 387 L SLFFLDQNISARVVNSPRHKM KGAAYHQDM VLG+ITG LS++GLPWQCAATVQSLNHVRQMAT E + +S RSE I S+ ETR TGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK Sbjct: 493 LTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPA--TSAAGGRSETIESMHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK 619
BLAST of mRNA_H-paniculata_contig11455.945.1 vs. uniprot
Match: A0A835ZK65_9STRA (HCO3 transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK65_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.190e-47 Identity = 86/129 (66.67%), Postives = 100/129 (77.52%), Query Frame = 1 Query: 1 LQSLFFLDQNISARVVNSPRHKMVKGAAYHQDMAVLGLITGALSLIGLPWQCAATVQSLNHVRQMATLETSGVSSTTSKRSEEIASIFETRATGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK 387 L SLFFLDQNIS+RVVNSP+H M K AYHQD+ VLGLITG LS++GLPWQCAATVQSLNHVR M+T E + S + E I + ETR TGF +HAL+L S+ +LP L +IPM VVSGIFLYLGRK Sbjct: 194 LTSLFFLDQNISSRVVNSPKHNMKKPPAYHQDLLVLGLITGTLSVLGLPWQCAATVQSLNHVRAMSTAEI--IDSPDGSKEEVIKDVVETRVTGFSIHALILASVGMLPVLKRIPMPVVSGIFLYLGRK 320
BLAST of mRNA_H-paniculata_contig11455.945.1 vs. uniprot
Match: A0A836CJA6_9STRA (Bicarbonate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA6_9STRA) HSP 1 Score: 154 bits (389), Expect = 4.990e-42 Identity = 80/129 (62.02%), Postives = 95/129 (73.64%), Query Frame = 1 Query: 1 LQSLFFLDQNISARVVNSPRHKMVKGAAYHQDMAVLGLITGALSLIGLPWQCAATVQSLNHVRQMATLETSGVSSTTSKRSEEIASIFETRATGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK 387 L SLFFLDQNISARVVN P HK+ K AYHQD+ LG+ITG LS++GLPWQCAATVQSLNHVR ++T + V ++ E + + ETR TGF HAL+L S+ LP L IPM VVSG+FLYLGRK Sbjct: 295 LTSLFFLDQNISARVVNRPAHKLKKPPAYHQDLLTLGVITGVLSVLGLPWQCAATVQSLNHVRALSTTQV--VDGPDGEKQEVVTEVCETRVTGFATHALILMSVGALPLLRLIPMPVVSGMFLYLGRK 421
BLAST of mRNA_H-paniculata_contig11455.945.1 vs. uniprot
Match: A0A7S3B5Q5_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B5Q5_9EUKA) HSP 1 Score: 141 bits (355), Expect = 3.040e-39 Identity = 74/129 (57.36%), Postives = 90/129 (69.77%), Query Frame = 1 Query: 1 LQSLFFLDQNISARVVNSPRHKMVKGAAYHQDMAVLGLITGALSLIGLPWQCAATVQSLNHVRQMATLETSGVSSTTSKRSEEIASIFETRATGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK 387 L LFFLDQNI+ R VNSP HK+ KGAAYH D+ LGL+TGA SL+GLPW C+ATVQSLNH+R M+ S +S E + ETR TGF VHA +L S +P L +P+AVVSG+FLYLG+K Sbjct: 29 LAMLFFLDQNITVRTVNSPAHKLKKGAAYHLDLFALGLLTGAASLMGLPWMCSATVQSLNHIRAMSIYTKS--TSPDGAVLELPEKVIETRVTGFGVHAAILASALFIPVLKSVPLAVVSGVFLYLGKK 155
BLAST of mRNA_H-paniculata_contig11455.945.1 vs. uniprot
Match: A0A7S1GQR4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQR4_CYCTE) HSP 1 Score: 137 bits (344), Expect = 6.580e-38 Identity = 72/134 (53.73%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 1 LQSLFFLDQNISARVVNSPRHKMVKGAAYHQDMAVLGLITGALSLIGLPWQCAATVQSLNHVRQMATLETSGVSSTTSKRSE-----EIASIFETRATGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK 387 L SLFF+DQNIS RVVN+P +K+ KGAAY+ DM LG+IT ALS++GLPW C ATVQS+NHV+ M T +K +E EI + ETR TGF +H ++ +L LLP L +P+ VVSG+FL+LGRK Sbjct: 13 LTSLFFMDQNISVRVVNNPENKLKKGAAYNLDMVALGVITFALSIVGLPWMCGATVQSMNHVKAM----------TETKFNEQTGDLEIVDVTETRTTGFVMHGMIAATLGLLPLLRSVPIPVVSGVFLFLGRK 136
BLAST of mRNA_H-paniculata_contig11455.945.1 vs. uniprot
Match: A0A7S1FU71_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FU71_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.460e-37 Identity = 75/129 (58.14%), Postives = 91/129 (70.54%), Query Frame = 1 Query: 1 LQSLFFLDQNISARVVNSPRHKMVKGAAYHQDMAVLGLITGALSLIGLPWQCAATVQSLNHVRQMATLETSGVSSTTSKRSEEIASIFETRATGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK 387 L LFF+DQNIS R+VN+ +K+ KGAAY+ DM LGLIT LSL+GLPW C ATVQSLNHVR ++ S T EE+ S+ ETRATGF HA V S+ LLP L +IP+ VVSG+FL+LGRK Sbjct: 380 LTCLFFMDQNISTRLVNNKENKLKKGAAYNMDMVALGLITAGLSLVGLPWMCGATVQSLNHVRALSKYCPSAAPGT-----EELDSVIETRATGFFTHAAVASSIFLLPLLSRIPIPVVSGVFLFLGRK 503
BLAST of mRNA_H-paniculata_contig11455.945.1 vs. uniprot
Match: A0A1E7FWX8_9STRA (Bicarbonate transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWX8_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.900e-36 Identity = 73/129 (56.59%), Postives = 93/129 (72.09%), Query Frame = 1 Query: 1 LQSLFFLDQNISARVVNSPRHKMVKGAAYHQDMAVLGLITGALSLIGLPWQCAATVQSLNHVRQMATLETSGVSSTTSKRSEEIASIFETRATGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK 387 L +LFF+DQNIS RVVN+P +K+ KGAAY+ DM LGLITG LS++GLPW C ATVQS+NHV+ + + + T EI + ETR TGF VHA++ GSL LLP + IP+ VVSG+FL+LGRK Sbjct: 437 LTALFFMDQNISVRVVNNPDNKLKKGAAYNLDMVALGLITGVLSVLGLPWMCGATVQSMNHVKALTDSVYNAETGET-----EIVDVTETRLTGFLVHAMIAGSLLLLPLVRLIPIPVVSGVFLFLGRK 560
BLAST of mRNA_H-paniculata_contig11455.945.1 vs. uniprot
Match: K0SD84_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SD84_THAOC) HSP 1 Score: 137 bits (346), Expect = 1.920e-36 Identity = 69/129 (53.49%), Postives = 93/129 (72.09%), Query Frame = 1 Query: 1 LQSLFFLDQNISARVVNSPRHKMVKGAAYHQDMAVLGLITGALSLIGLPWQCAATVQSLNHVRQMATLETSGVSSTTSKRSEEIASIFETRATGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK 387 L LFF+DQNIS R+VN+P +K+ KG AY+ DM LG+ITG LS++GLPW C ATVQS+NHVR MA + + ++ EI + ETR TGF +HA++ ++ LLP + KIP+ VVSG+FL+LGRK Sbjct: 196 LTCLFFMDQNISVRLVNNPDNKLKKGEAYNLDMVALGIITGVLSVLGLPWMCGATVQSMNHVRAMAETKLNDETN-----EMEITQVTETRLTGFVIHAMLASTILLLPLIKKIPIPVVSGVFLFLGRK 319
BLAST of mRNA_H-paniculata_contig11455.945.1 vs. uniprot
Match: B7FQY4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQY4_PHATC) HSP 1 Score: 140 bits (352), Expect = 3.550e-36 Identity = 75/132 (56.82%), Postives = 92/132 (69.70%), Query Frame = 1 Query: 1 LQSLFFLDQNISARVVNSPRHKMVKGAAYHQDMAVLGLITGALSLIGLPWQCAATVQSLNHVRQMATL---ETSGVSSTTSKRSEEIASIFETRATGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK 387 L SLFF+DQNIS RVVN+P +K+ KGAAY+ DM LGLIT LSL+GLPW C ATVQSLNHVR + E +G EI + ETR TGF VHAL+ +LA+LP L +P+ VV+G+FL+LGRK Sbjct: 442 LTSLFFMDQNISVRVVNNPDNKLKKGAAYNLDMVALGLITSCLSLVGLPWMCGATVQSLNHVRALTETRFNERTG--------EPEIIGVTETRVTGFAVHALICSTLAILPLLRFVPIPVVAGVFLFLGRK 565 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11455.945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11455.945.1 >prot_H-paniculata_contig11455.945.1 ID=prot_H-paniculata_contig11455.945.1|Name=mRNA_H-paniculata_contig11455.945.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp LQSLFFLDQNISARVVNSPRHKMVKGAAYHQDMAVLGLITGALSLIGLPWback to top mRNA from alignment at H-paniculata_contig11455:164..2461+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11455.945.1 ID=mRNA_H-paniculata_contig11455.945.1|Name=mRNA_H-paniculata_contig11455.945.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2298bp|location=Sequence derived from alignment at H-paniculata_contig11455:164..2461+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11455:164..2461+ >mRNA_H-paniculata_contig11455.945.1 ID=mRNA_H-paniculata_contig11455.945.1|Name=mRNA_H-paniculata_contig11455.945.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at H-paniculata_contig11455:164..2461+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |