|
|
Homology
BLAST of mRNA_H-paniculata_contig1144.938.1 vs. uniprot
Match: D7G0P9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0P9_ECTSI) HSP 1 Score: 240 bits (613), Expect = 2.050e-66 Identity = 123/212 (58.02%), Postives = 151/212 (71.23%), Query Frame = 3
Query: 552 LKAMTSVLATTLSRHKPSLVNASVGFATFAAGDVLAQGTCLPPEVLLDQRSEADLSAIKTTSWLGSLSDRTRGVDFERSAKVGLLGIALNGVALGAWYKVLDKYLGSSRTNMKSVLSKILADQMCYAPFTITSFVTYAAVLNGGGVKKTWEEARHNMSETFVSTWLMDWKIWPAANLVMFRFIPSSYRPSCASLVCVAWQTYLSSVSFD-PH 1184
+K S L+ + +L+N +VGF+TFA GD L+QG ++++ R S + SW DRTR VD+ RSAKVGLLGI LNG ALGAWY+VLD+Y+GS RT + +L K++ DQM YAPF+ITSFV YAAVLNGGG K +E + N+ ETF S WL DWK+WPAANLVMFRFIPSSYRPS AS+V VAWQ YLSSVS+D PH
Sbjct: 1 MKVFGSSFIAALANRRSTLINGAVGFSTFAVGDALSQGARPQSQLVVAGRRRQHQS--EEPSWQQQFIDRTRRVDYARSAKVGLLGIMLNGFALGAWYRVLDRYIGSDRTRFQQILKKLVVDQMVYAPFSITSFVGYAAVLNGGGPAKVVDETKKNLGETFWSIWLTDWKVWPAANLVMFRFIPSSYRPSFASMVQVAWQAYLSSVSYDSPH 210
BLAST of mRNA_H-paniculata_contig1144.938.1 vs. uniprot
Match: A0A4P9Y3T6_9FUNG (Uncharacterized protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y3T6_9FUNG) HSP 1 Score: 88.2 bits (217), Expect = 3.900e-16 Identity = 62/198 (31.31%), Postives = 88/198 (44.44%), Query Frame = 3
Query: 591 RHKPSLVNASVGFATFAAGDVLAQGTCLPPEVLLDQRSEADLSAIKTTSWLGSLSDRTRGVDFERSAKVGLLGIALNGVALGAWYKVLDKYLGSSRTNMKSVLSKILADQMCYAPFTITSFVTYAAVLNG-------GGVKKTWEEARHNMSETFVSTWLMDWKIWPAANLVMFRFIPSSYRPSCASLVCVAWQTYLS 1163
R P L + FA GDVLAQ G S G D R+ ++ G G LG WY++LDK++ S T K++++++L DQ+C AP I SF T +L G GG+KK + EA N ++K+WPA LV F F+P +R + V + W TY+S
Sbjct: 13 RQSPLLTQSLATGGLFALGDVLAQQ--------------------------GVESKGLAGHDLTRTGRMLFFGTTFAGPVLGTWYRLLDKWIRLS-TPGKTLVTRVLVDQVCGAPVIIASFFTGLGLLAGDSRKTILGGLKKGYPEALKN-----------NYKLWPAVQLVNFHFVPLQHRLLLTNTVALGWNTYMS 172
BLAST of mRNA_H-paniculata_contig1144.938.1 vs. uniprot
Match: A0A131X6B9_9ACAR (Putative conserved plasma membrane protein n=1 Tax=Hyalomma excavatum TaxID=257692 RepID=A0A131X6B9_9ACAR) HSP 1 Score: 87.8 bits (216), Expect = 4.910e-16 Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 3
Query: 756 DRTRGVDFERSAKVGLLGIALNGVALGAWYKVLDKYLGSSRTNMKSVLSKILADQMCYAPFTITSFVTYAAVLNGGGVKKTWEEARHNMSETFVSTWLMDWKIWPAANLVMFRFIPSSYRPSCASLVCVAWQTYL 1160
+R VD R+A+ ++G+A G L WY L++ +GSS V+ K+ DQ + P I SF+ L +++WE + + F+ ++ +WPAA L+ FRFIP SYR AS V + W TYL
Sbjct: 40 ERRSNVDVPRAARFFIMGVAFVGPVLRVWYIALERIVGSSG-GRALVVKKVFLDQALFTPVFIPSFLVTLGTLQ----RRSWESIKETVRADFLPILKANYMLWPAAQLINFRFIPLSYRVPFASCVALIWNTYL 169
BLAST of mRNA_H-paniculata_contig1144.938.1 vs. uniprot
Match: A0A6P7S502_OCTVU (protein Mpv17 n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7S502_OCTVU) HSP 1 Score: 88.2 bits (217), Expect = 1.020e-15 Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 3
Query: 723 IKTTSWLGSLSD-------RTRGVDFE--RSAKVGLLGIALNGVALGAWYKVLDKYLGSSRTNMKSVLSKILADQMCYAPFTITSFVTYAAVLNGGGVKKTWEEARHNMSETFVSTWLMDWKIWPAANLVMFRFIPSSYRPSCASLVCVAWQTYL 1160
I +T+ L SL D +G D+ R+A+ G G G L WY V+++ G + K+ L K++ADQMC+AP + +F+ +L G TW ++++ + E F + ++++WPA L F FIP YR + V W TYL
Sbjct: 57 IASTATLMSLGDFISQTFVERKGKDYNIIRTARFGFFGTVYVGPTLRTWYLVMERLFGVGK---KTALFKLVADQMCFAPVFLATFICGMELLKGN----TWNDSKNKVVENFKQVLMSNYQLWPAVQLCNFYFIPFQYRILVVNTTAVGWNTYL 204
BLAST of mRNA_H-paniculata_contig1144.938.1 vs. uniprot
Match: A0A6P8HN46_ACTTE (protein Mpv17-like isoform X2 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HN46_ACTTE) HSP 1 Score: 86.7 bits (213), Expect = 1.750e-15 Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 3
Query: 774 DFERSAKVGLLGIALNGVALGAWYKVLDKYLGSSRTNMKSVLSKILADQMCYAPFTITSFVTYAAVLNGGGVKKTWEEARHNMSETFVSTWLMDWKIWPAANLVMFRFIPSSYRPSCASLVCVAWQTYL 1160
D R+ ++G++G+ L G L AWY LDK + +S L K+L DQ +AP I F + +L+G KT+ + + + E +V T + ++K+WPAA +V F F+P +R +V + W TYL
Sbjct: 42 DVTRTVRMGVVGLCL-GPILRAWYLTLDKVVVASSRPKLDGLKKMLLDQALFAPVCIGFFYCVSEMLSG----KTFSQCKETLKERYVETLIANYKLWPAAQIVNFTFVPLEHRVGFVQIVAIFWNTYL 165
BLAST of mRNA_H-paniculata_contig1144.938.1 vs. uniprot
Match: A0A6P8HUY4_ACTTE (protein Mpv17-like isoform X1 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HUY4_ACTTE) HSP 1 Score: 86.7 bits (213), Expect = 2.030e-15 Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 3
Query: 774 DFERSAKVGLLGIALNGVALGAWYKVLDKYLGSSRTNMKSVLSKILADQMCYAPFTITSFVTYAAVLNGGGVKKTWEEARHNMSETFVSTWLMDWKIWPAANLVMFRFIPSSYRPSCASLVCVAWQTYL 1160
D R+ ++G++G+ L G L AWY LDK + +S L K+L DQ +AP I F + +L+G KT+ + + + E +V T + ++K+WPAA +V F F+P +R +V + W TYL
Sbjct: 48 DVTRTVRMGVVGLCL-GPILRAWYLTLDKVVVASSRPKLDGLKKMLLDQALFAPVCIGFFYCVSEMLSG----KTFSQCKETLKERYVETLIANYKLWPAAQIVNFTFVPLEHRVGFVQIVAIFWNTYL 171
BLAST of mRNA_H-paniculata_contig1144.938.1 vs. uniprot
Match: UPI0018976EA2 (protein Mpv17-like isoform X1 n=2 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI0018976EA2) HSP 1 Score: 85.9 bits (211), Expect = 2.470e-15 Identity = 44/135 (32.59%), Postives = 71/135 (52.59%), Query Frame = 3
Query: 756 DRTRGVDFERSAKVGLLGIALNGVALGAWYKVLDKYLGSSRTNMKSVLSKILADQMCYAPFTITSFVTYAAVLNGGGVKKTWEEARHNMSETFVSTWLMDWKIWPAANLVMFRFIPSSYRPSCASLVCVAWQTYL 1160
+R +D R+A+ ++GIA G AL WY L++ +GS V+ K+ DQ + P + SF+ L +++WE + + ++ ++ +WPAA L+ FRF+P SYR AS V + W TYL
Sbjct: 40 ERRSSIDVPRAARFFVMGIAFVGPALRVWYFTLERIVGSGG-GRALVIKKVFLDQALFTPVFLPSFLVTLGALQ----RRSWESIKQTVRADYLPILKANYMLWPAAQLINFRFVPLSYRVPFASCVALVWNTYL 169
BLAST of mRNA_H-paniculata_contig1144.938.1 vs. uniprot
Match: A0A6J2XII1_SITOR (protein Mpv17-like n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2XII1_SITOR) HSP 1 Score: 85.5 bits (210), Expect = 3.360e-15 Identity = 43/130 (33.08%), Postives = 71/130 (54.62%), Query Frame = 3
Query: 774 DFERSAKVGLLGIALNGVALGAWYKVLDKYLGSSRTNMKSVLSKILADQMCYAPFTITSFVTYAAVLNGGGVKKTWEEARHNMSETFVSTWLMDWKIWPAANLVMFRFIPSSYRPSCASLVCVAWQTYLS 1163
D R+AK G LG G L WY++L K G+S ++ + L K+ DQ+ +AP ++ F+ L+G V ++ + +S T++ +++WK+WPA LV F +P +Y+ V + W TYLS
Sbjct: 47 DLSRTAKFGFLGTCFVGPTLTVWYRLLAKQFGTS-SSTSTALKKMACDQLIFAPTFLSIFIANVNFLSGKSV----QDIKQELSRTYLDILIVNWKVWPAVQLVNFYCVPLNYQVLLVQGVALFWNTYLS 171
BLAST of mRNA_H-paniculata_contig1144.938.1 vs. uniprot
Match: UPI0018893730 (protein Mpv17-like n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI0018893730) HSP 1 Score: 85.1 bits (209), Expect = 3.550e-15 Identity = 45/130 (34.62%), Postives = 69/130 (53.08%), Query Frame = 3
Query: 771 VDFERSAKVGLLGIALNGVALGAWYKVLDKYLGSSRTNMKSVLSKILADQMCYAPFTITSFVTYAAVLNGGGVKKTWEEARHNMSETFVSTWLMDWKIWPAANLVMFRFIPSSYRPSCASLVCVAWQTYL 1160
VD R+A+ L+G G + W+ L++++GS V K++ DQ +AP I SF+ V+ G +++W + ++ ++ + IWPAA LV FRF+P SYRP A V V W TYL
Sbjct: 24 VDVVRAARFFLMGAGFAGPVIRIWHLTLERFVGSG-VGAFVVARKVMIDQALFAPVFIASFL----VVLGAFKRRSWHDIEQSLRTNYLQILKTSYVIWPAAQLVNFRFVPLSYRPPFAGCVAVVWSTYL 148
BLAST of mRNA_H-paniculata_contig1144.938.1 vs. uniprot
Match: UPI00189611B2 (protein Mpv17-like n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI00189611B2) HSP 1 Score: 85.5 bits (210), Expect = 4.200e-15 Identity = 42/135 (31.11%), Postives = 71/135 (52.59%), Query Frame = 3
Query: 756 DRTRGVDFERSAKVGLLGIALNGVALGAWYKVLDKYLGSSRTNMKSVLSKILADQMCYAPFTITSFVTYAAVLNGGGVKKTWEEARHNMSETFVSTWLMDWKIWPAANLVMFRFIPSSYRPSCASLVCVAWQTYL 1160
+R VD R+A+ ++G+ G + W+ L++ +GS V K+L DQ+ +AP I S + L +++W++ +++ ++ + +WPAA L+ FRF+P SYRP A V V W TYL
Sbjct: 40 ERRSNVDVVRAARFFVMGVGFVGPVIRMWHLTLERVVGSGVAG-SLVFRKVLIDQVLFAPVFIASLLVVLGTLQ----RRSWDDIENSLRANYLQILKTSYMLWPAAQLINFRFVPLSYRPPFAGCVAVVWSTYL 169
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 243.8 |
| Seed ortholog evalue | 1.2e-61 |
| Seed eggNOG ortholog | 2880.D7G0P9 |
| Preferred name | SYM1 |
| KEGG ko | ko:K03259,ko:K13348,ko:K13349 |
| KEGG Pathway | ko01521,ko03013,ko04066,ko04146,ko04150,ko04151,ko04211,ko04910,map01521,map03013,map04066,map04146,map04150,map04151,map04211,map04910 |
| KEGG Module | M00428 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006066,GO:0006067,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016999,GO:0017144,GO:0019866,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034308,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901615 |
| EggNOG free text desc. | Belongs to the peroxisomal membrane protein PXMP2 4 family |
| EggNOG OGs | KOG1944@1,KOG1944@2759 |
| Ec32 ortholog description | Mpv17/PMP22 |
| Ec32 ortholog | Ec-09_001220.1 |
| COG Functional cat. | C |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03012,ko03019 |
| Exons | 4 |
| Model size | 4230 |
| Cds size | 1026 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1144.938.1 >prot_H-paniculata_contig1144.938.1 ID=prot_H-paniculata_contig1144.938.1|Name=mRNA_H-paniculata_contig1144.938.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=342bp
MIALKAMTSVLATTLSRHKPSLVNASVGFATFAAGDVLAQGTCLPPEVLL
DQRSEADLSAIKTTSWLGSLSDRTRGVDFERSAKVGLLGIALNGVALGAW
YKVLDKYLGSSRTNMKSVLSKILADQMCYAPFTITSFVTYAAVLNGGGVK
KTWEEARHNMSETFVSTWLMDWKIWPAANLVMFRFIPSSYRPSCASLVCV
AWQTYLSSVSFDPHAPPTAATTTAITTATDHITSAVQVKGGGYEGIQPGS
SPVSVKASLPQPDMHQQRRHFNQRRMTSRYAYFGPRKKSASASVEGNGAI
AGGKDTRASDIVRRSIGEGMADEAEVLTGKDAGGEKTCKEL* back to topmRNA from alignment at H-paniculata_contig1144:20080..28563+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1144.938.1 ID=mRNA_H-paniculata_contig1144.938.1|Name=mRNA_H-paniculata_contig1144.938.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8484bp|location=Sequence derived from alignment at H-paniculata_contig1144:20080..28563+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTGTAACATGACGTAGGCATACTCCAGATCTACGAAATGCGGTCTAAAG
TACCACCAAAGGGGTAACGGCCCACAGTAAGTACCATCACGATATTGGGG
GGGTCAGCAGCAGACTTAGACCACAAAGAGAATTTTAGCCACAACCCAAG
CGCCGCAGGAGATACTCTTGGCTTGATTAGTGGTGGTGTTGGCGTGTTTG
GCGTACTGTTTCCTTTGGCACGAATCGATGGCAGTGATACCGAAATAATG
GGGAAAAGGATAAGCAAAATTACGTGTCCCTCCGTCTTTGGAGCCTGGAT
TATAGGACAGCTGGCCTTCAGAACAGCAGACAGCTCTGATTTTTGTTATC
AATAGGAGCTTGACAAAAAGGCAGCGTGGGTCCACAGGCAGCGGCGTTTC
AGCTCCACTATTGCCAGGCGAACACGCCGTATTTTCGCTGCAAGGATATT
TGCTATCACTGCAACGACGGTAAAACATCGCAGGGTTGGCTTTGCCTGGT
GCAATAAATCATCGTTCGCGTTCAACACCCTTGCTCATCGTTATGATCGC
TTTGAAGGCGATGACGAGCGTCCTCGCGACAACGCTCTCGAGGCACAAGC
CCTCCCTTGTGAACGCGAGCGTAGGTTTCGCAACATTCGCCGCTGGAGAT
GTATTGGCGCAGGGGACGTGCCTTCCACCGGAAGTTCTTTTAGACCAGAG
GAGCGAGGCGGACTTGTCTGCAATTAAGACCACCTCCTGGCTTGGGTCTT
TATCCGACAGGTGAATTGCGCAGTCACGATGACGGTTACGGATGCAATGC
AATTAAGTAGGAATATTCGATCGGGTACGTAGAGATTTAGAATTCTAGTG
CCTCTCTTGCCACCGAACTACTCAGCAGTTTTGTCAAGTGATTCATTTCG
TAGTTGGGACTAAATTGCTCACTTCCTGCTTTGATTCCTCCACTTAAAGT
GGCAGGTTATACAAGTACCTAACTCTTGAAGCTGTGCAGCCTTCCTCAGT
TTGCAAACGTGATATTATACCTATAGCAATAGAAGAGCAACTCGAGCGAA
CCTTGATTCTAGCTCTTTCTGTTGCAGTTTCACATGCACGAAGCATTTAC
AGACACATTACCGTAGTTTACGGTGTATAGCACCCCTGCCTTCGTATACC
ACCCCGAGTGATAACAAATTTTGGCAATTTGGGCGTTATCACCGGGGATA
CCATGTATATGCCACCCCGTGATAACTGGGGTGATTGCCTTGTATACCAC
CCCCCGGGGATAAGACTGGGGTACCACCAAAACTATAACACCCCCTCCTG
GCCAAAAAGCGCGTAGATACTCGACTTAAACACCAGTATTTTTGTCTGTA
AATCCTCCTTTTCTTTCACTTCCCCAGTCCATGGTTCTACTCTACTTGAT
TGTGAGACACGTAACATGTCTGGGAGAGGCGTACCAACCCTGAGATTTGG
TGTTTTTTGGGGGGTTTTTTAACCCCCGGAAGGTTAGGCAAAAACCCATG
CCGCTGCTTCCATTTGGTGTGTTGAGCCCCGTCCTGGCTCGTGCTATGGT
GTGGGCGATGCCCTCCCCCCTGGCCATTGTACCATGTGGTGGGCTTGTTG
GTTGGTTTGCGTACTTCATGGATTTGACATTTTTATTGATGGTCTGTGAT
TGATTGATTAACGGACCCATTATTGATTACGTTTTTTTGTTTTGTTTGCT
TCACCTTTCTTTGATTTGCTTTGATTTGTATTTTGCTTTACTTTCTTTCG
GGGTTTTGTTTACCGTGTTGCATTTGCTCTTCTTCTGTCTTCAGTACCGA
AGGTCGCGGGTCTGAGAAGTGGGGGGGGGTTAGGCCCATAAAAATACAAA
AATGGTAACAACATGGGACCTCTTTTTTCATTATCAACCTCGCACACACG
TGGGGGTGTGAGACAAACACTGCACGGCACGACATACTTCAACCCCCTCC
GCTTATCACCCCCAATCGCCGCAGCATGCTATCACCAGAGATATGGGATA
TACCACCAACCCTCCGAATACCAATCCCTGGTGATGAAAAATTCGGCCAA
AAAAACGTCATCATCAGGGGTTCCTATACACCTATAAACTGCGGTATTTG
ATTTGGTTGCGTGACGTTGATGACAGTATCGATATATTTAGATGTACGAT
TTACAATATATCTTCTTCCGTCATTATTGCCCACGAACCAGGCTCATCGT
CACGGTAACGTGCATCTCGTATCGGTACTTCTCTTTGGTCGCGACACATG
CTGAATTATTGTATACTTCTACTGCAAAAGTACTCGATGCAAGCCCGATG
GTTGATTTAGACACAACTTCACGCCCGTAGAGCTGAAAGGGTCCACGACT
TCCTGGGTGTAAAATCTTTCCAAACCAGTGGGCGAGGTCAGCTATCTGGA
GAAGCCAGACCCCGTACTCTACCATCATCGGACGAACTTGCCCATCAACG
AGCGCATCTCGACGCGATGTTCCCCATGAAAGAAGCGTTCAGTTTCACTC
TCACAGCGTAGTTTCCTTTCGATGAGGTCGACTTTAACCCCGGTACCGCC
GGGGCCCGAAAAAGAACGAATAAAGGGGTTCGATAATCCCGCGGCGAAAT
CGCCACAAAAAAAGGGGGGAGATCCCTTCTGACGAGGGGGGGGGGGTGGC
GTCCGACTTCAGAATGCTGGAGTATGGTAATGGATTATACACAAAATGCT
GAGGCCCAGGCCAATCAAAAGCGTGTCGTCACCTGCACATTAGGTAAATT
GTTTTGGGGTCACAGAATACCTACACAATACATACCTCCGGCGGTTTAGG
GGGGTCGAGCAAAACCTGCAGTCTGGCTTTTTTCATCTTTTGGTTGTTGT
ATTTTTAGAGGCGATATCCTTTGGTCTGGTTGTGTTCTGCAAAGACAGGT
ATAGTATCGACAGCGAGGACGAGAGCGATGATGCGCATGGTATGCCTGAG
CATCCTGGCACCGTAGCTGCCGCCGACGTTTTCAACGATGACACGGACAA
AGTTCAATTGTGCGACTAATGTTTCTGCATTCGCTGTCTGCACTGACTTG
GGAGTGTCGAAATAGCGCCGCGTGATCGCCGTCGTGGTGCTTTTGATAAA
ATGTCCTGGCTTGCGGCTTGTGCGGCATACATCCCCTGTACATTCAGTCG
GTCGCTCATGATGTACTTGTGCTTCGCGTTTCGATCACGTAAGTGCTGCT
ATCATGGAACGCAAAACCATGTCAATTCATTTGTCTGCATGAATTTCGGG
ACCGGTTGTAGTCTTTAGAGCTCCTTATCTCCATGATGTCGTAGGTATTT
GTCACAAAATAGTTCATAAGGCATTTTGGCCTATTTTCCGAGCAGGTAGG
TATCGTACAGGTATTGTAGGCGGCCCGGCGCCATAGGGGATAAAAACGGA
ATACTTGGACACCGTAACCTACGGTACGGTAGGCTTCAAGTTGATCGGGC
GTTGACTTCGAACCATCTTTTCAGCACGGAGCAATTGATACTGTACGTAC
CTCGGCGTGTTCGGCCCTCCTTATGGTACCGTGCTCTCTTCCCCCTGGAC
TAGAACCAGGGGCGTAGATTTCGAGCGAAGCGCGAAGGTGGGACTGCTGG
GCATAGCTTTGAATGGAGTGGCTCTGGGCGCCTGGTATAAGGTGCTTGAC
AAGTATCTCGGCTCGAGCAGGTGCGTTTTTTGTGTGACTTTTCCGCTACG
TTTGTTCTTCAAGAATGGGCCACGCTCTGCAGTGCACCGGCGTATTAAAT
AGTGACAAGAGCTTTAATTTTTGGAGTCAGCTTAAGCTTCAAGTATTCCT
AGCTTTTAAGCCGGAAATAAACAATCAAACAGCGGCATTCAATTCAGGTA
AACGCTGCCAACTATTTTTCTGCTTTCTACTTTAGTATGTCCCCGCTGCT
GAGAACCTCAATAACAAAAGCATGAATGCTGTCGATTCAAAGATTGATGG
ATTCCAGCTGTTGTTGTTTTTTATTTTCTTATATGACAGCTGTTTGATAA
ATAACATGACCCTGTTTTGCCATATTTTGTGAAGTATGTCTTCAACTAAA
ATGTGTAGTGCACTTTAACAACATAGCCCTGTTTTTTGTTGAAAAATAAA
TCGGTGAAAAAACACAGGACAAACATGAAAAGCGTCCTATCCAAAATCCT
GGCGGATCAGATGTGTTACGCCCCCTTCACGATCACGAGCTTCGTCACCT
ACGCGGCCGTGCTGAACGGCGGCGGCGTGAAGAAGACATGGGAGGAAGCG
CGGCACAACATGTCGGAGACCTTCGTGTCCACGTGGCTCATGGACTGGAA
GATCTGGCCAGCCGCTAACCTGGTCATGTTCAGGTAATTCCTTGGCTCTT
GCCCTCTATCTAATGACTACATAGTATTCATCGACAAAACGTGAAGAATA
CCGCGAAAAAGCGTCTGGCTCGTGCAGCAGTGCAAGCGAACTTCTGAGTA
TATTAAGTTAATTTGCCTTACAATTGTGTATCATGTCTGAGTCAGCGTTT
TGCTCAATATACATATATACTTAGGGTTAGGTATCCAGATTGAAATCAAT
GGTACCGCCCATCCAGATTGAGTTTATAGAGGCCCGTAAGCATCTCCATA
TATTTTTTTCTTTGGTTGTAATCCTATGCTTTTTTGGGGTTAATGCCCAA
AATTTCGCGGAAATTGGCTGAATTCCTCGGGAGCGCGCACGATCCAAAAG
AAGTGTCGTCTGAAAAAAAATAATCTGTTGCTCCTTCAAAAACAAGCTGC
GGCGATCTCAGCTGCTTTTCCCCGGGGTAATCTACTTTGGGCCGGCGGAA
ATACCATCGCAATCTCGATCGCCATCGCCTAACCGCAGCCTAGGGGCAGC
TCTGGGCCCCGTTTGACCCGTTGAGGCGTGTTTATGGGCGAGTCAATTGA
GTTTGTGTGCTTGGCGCTGGTGGTCCGGCGACAAAGCGGCCAAAAATGTC
CAAAAATAGGTCAACTTTGACGCTGAAATCTATCAGGGAAAATGATTAGC
ATCGGACCTCTGAATAGTTTATGAGAATCGTCATCGTACTTGCTTTTCAA
CGATTCCATCCGTAGCCTTTGAAAAAGAACGGATCTGGAGATACGATGTG
CCAAACTCAACCGACTTTACTTATGGCACAGAAGAAGTGTATATCTTGAG
CATTTATTTTTAGGAGAAATGTACGTCGTTCCCGTGTCAGGGATACTCCA
ATGTACGCAGATTGAAATAAAGGGTTCCACCTATATCCTCGTCTCTGGCC
ACAAATATAGTCTTCGTCCAGGGGAGTGTCGTATATATGTGTCGGCAGTG
GCCTTAAACAACGCGCCACGCCCCGCTCCCGACCGGAAAAAACACAGGTT
TATACCATCCTCCTACCGCCCGTCGTGCGCGAGCTTGGTCTGTGTAGCCT
GGCAAACCTACCTTTCCAGTGTTAGTTTCGACCCGCACGCACCACCAACA
GCAGCAACGACGACGGCGATAACGACGGCGACAGACCACATCACCAGTGC
AGTCCAAGTCAAGGGTGGGGGTTACGAGGGGATACAACCGGGCTCGTCCC
CGGTCTCCGTAAAGGCCTCTTTACCGCAGCCTGATATGCACCAGCAACGG
CGGCATTTTAATCAGCGGAGAATGACTTCGCGGTATGCGTATTTTGGGCC
GCGCAAGAAATCTGCTTCTGCTAGCGTTGAAGGTAATGGGGCAATTGCGG
GCGGGAAGGATACCAGAGCGTCAGATATTGTGCGAAGGAGTATTGGTGAA
GGAATGGCGGATGAGGCAGAGGTTCTCACGGGCAAAGATGCTGGGGGGGA
AAAAACGTGTAAGGAATTGTAGGAAGGGGGGGTGCCGATCGCGCGCAGAG
AGGTGTCCCGCTCTTCGTATCGCACCATGACGAGCAATGAATTCGACGAA
CCGAGTGCTACGACAGTTTGTTACAAATAGTTTCATCGTTGTTGCTCAGA
TCAAACAGCTAGTCGTGTTGTGTCGGTCGTCGTCCTTTAGGGAAGAAACT
TACACGCTATATGTATTCATGTGTTGTGTGTCTTGGCGTGTTTGTTTGGT
AGTGTGTCGTACTCTGCCCCCTAGCCCCACTGGAGTAGGAGTTCGCGACT
ATGCACAGCCCGTGAGTCGTGAGTGCTGGGGTATGGTGACAGTGCTACAC
TGACAGGCGCAGCTGTGGTTAGAGAGCTATCTGCCTATAACCTCATGAAA
CCCTAGCACCCGAAGCGTAATATGCAAAATTAGGAAGTTTTCCGTCGGTG
TTTCCAGGGAGGTCGGCTAGGGTGCTCCCTTTGCATAGTTACGCCATATA
TAAGTGAGTCGTCTCCGACAGCCGACCGTCCCGGATTATGCTACTGTAGC
GGTGTCGTGTAAGGATTATAGGAGACTGAAGGGTCCGAGCAAGGGTCTAC
GAAGAACGACAACGAGGGTTACCGGTCCACGATGTCATCCAGAACTCCTG
CGGCGCGAAGAGCAAGCCCAACGGTCCCCTCCTCCCCATAATTGACTCAG
TTTTGGATAATAACTAAGTACTCCGGCAGCTTGAAGATAGTCAGCATCCC
TCCGTTTTTTTTTACGGTTACTGTCATATTTTCCACAGTTCAGACAGTAA
TTTGTGCATATCTGCTTGTACTTTTGAGTCGCTGTTGACTCTGTGGTACT
TTGTCTAAACCGTATTCTCATGTTGTCGATGCCGTTCTGCTGACGAAGCT
GTTGTCGGCAATTGACTCGTGTGGTAATTCGCTATGTATGTAGTAGTTGG
TGGTACAGTTCTTGTTCTTGGTTCTCTTGTATCTGCTGCGTGTTGTTGCT
ATCACGTATCACCATACATGGATGTAGAGTTTTTGGGCTCTGAACATGTT
GCGCAGACCAAGATCAATCAAAACCATTTGTTTGCCTGCACGTATTAGTA
GCAGCGGCGGGAGCAAGCACTAGATCGTGGGTAGCATTCCTGGCCAAGAG
GATACCAAGATTTGACAACAGCGACGACCTTGAGCTTGTGCTAGTCACCT
TGTTTCGCAAGTTGGATCTTCAGTAGGTGTTGTCACCTGTTGAACAGTCA
TCATGAAAGCATAAACGGGGGTAGTTATTCATTTGTTGGACAAATATGTA
TTAGCATTGAATTATTTACACCTGGGGGACTAATCGTGCTCCACCAGATA
TTGTTTCGTGGTCACACATTATATGTGCTTACTTTTTCTCATCTCTAGAG
ATTTTAGATTTTATCTCCTGGCTGCGTAAGTATTGTTGTTTACGGCGGAA
AAAATGTATGGTCCTGACGTAAAAGCTAAATTTAGCCAGTTTTCAAGAGT
GTCCGTGTTCAGTCACTACTGCTCCCTTCTCCCCCCTACGGTGAAAAGTG
AAAGAATGTTGAAAAATATGACAGATTGCACAAAAGAGTGGTGTTTTGCT
ATATGGACAACTGTCAGACTTGAACATTTTGCAAGGGGTCCCGCAAGGAC
GTACCTCATTTCCAACAGTGTTTGAGGTTTATCAACGATGTGGCTGAGGG
TAGTCGGGGAAGTAAGGCAGGCAGTGGGTAAGAGCAGAAGGAAGTGTAAT
ATCTGGACTAATATTTGCGGATGACTTCGTGGGGATGTCTTCTACGCCGG
AGGGACTGTAGAAGCAGATTGATGCAGCGATGGACTTCTGCTAGAAAGTG
GAGACTCTCAGCATTTGTCAACAAGTCTGAACGGACAATACTCGGGATTG
GGGATCAACTGTTTTTTGCTGGGATTAAAATTCCGTTGTACTTGCAATGG
ATTACTTTGAAAATGGTGATGTAATGGCGAAATGCACATTCCGTGTGAAT
CGATGTATGAAAAGGTTTCCAATTTCACTGTGCAGAGTGAGTAGCAGTAA
GATGGATGGACATAAACTCTCCCCGGAAAGTGCCTTTCGCTACGTAGCAC
CATTTTCGAAGTATTCCATTGCAAGCTACCAGGGTAGATCAGTACATATG
TCTTAGCCTTGAGTTTTCGAAGAATTGCATGTGAGATGAACATATGAAGA
ATGATACCGAGAGAGGGGAAGCCCGGGTCGGATAGGAAAATTGCATCCAC
TACTAGCCGACCGGCATCTTGACAGACGTCTAAACGCTAAACACTGAAAA
GCGGTGCACACGTGGCCAGAGGGGTACCGTGTTGTGGACATTGATTGCAA
CGCCCACGCTGTGGTGAGGTTGGTGGTGTTTACGCAACGTATTAGGATAT
TGTGGTGAGGTTGACACTCTATATACAACATCCTCCCTCATACGTTTTAT
GCACACTGTGAACCTCACCGCAACGTGGGGATGTTGTAATGTTCGCAACA
AGGTACCCTATGGCCAAGTGTGTACAGTTAGCAGCCAACGAGTTGTAAGT
AGGTCAGATGAAAGCAGAGAAGAGTATTGTAGAATGTCCGCGGCGCACCA
GCAATCCAGCAGTAAGGGCAGAGTTGGGCAGACACCTCGTTAGAACAGGA
GAGACGTGAGAAAGTTGAAGTGGCAGTACTGACC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1144:20080..28563+ >mRNA_H-paniculata_contig1144.938.1 ID=mRNA_H-paniculata_contig1144.938.1|Name=mRNA_H-paniculata_contig1144.938.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2052bp|location=Sequence derived from alignment at H-paniculata_contig1144:20080..28563+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATCGCTTTGAAGGCGATGACGAGCGTCCTCGCGACAACGCTCTCGAG
GCACAAGCCCTCCCTTGTGAACGCGAGCGTAGGTTTCGCAACATTCGCCG
CTGGAGATGTATTGGCGCAGGGGACGTGCCTTCCACCGGAAGTTCTTTTA
GACCAGAGGAGCGAGGCGGACTTGTCTGCAATTAAGACCACCTCCTGGCT
TGGGTCTTTATCCGACAGATGATCGCTTTGAAGGCGATGACGAGCGTCCT
CGCGACAACGCTCTCGAGGCACAAGCCCTCCCTTGTGAACGCGAGCGTAG
GTTTCGCAACATTCGCCGCTGGAGATGTATTGGCGCAGGGGACGTGCCTT
CCACCGGAAGTTCTTTTAGACCAGAGGAGCGAGGCGGACTTGTCTGCAAT
TAAGACCACCTCCTGGCTTGGGTCTTTATCCGACAGAACCAGGGGCGTAG
ATTTCGAGCGAAGCGCGAAGGTGGGACTGCTGGGCATAGCTTTGAATGGA
GTGGCTCTGGGCGCCTGGTATAAGGTGCTTGACAAGTATCTCGGCTCGAG
CAGAACCAGGGGCGTAGATTTCGAGCGAAGCGCGAAGGTGGGACTGCTGG
GCATAGCTTTGAATGGAGTGGCTCTGGGCGCCTGGTATAAGGTGCTTGAC
AAGTATCTCGGCTCGAGCAGGACAAACATGAAAAGCGTCCTATCCAAAAT
CCTGGCGGATCAGATGTGTTACGCCCCCTTCACGATCACGAGCTTCGTCA
CCTACGCGGCCGTGCTGAACGGCGGCGGCGTGAAGAAGACATGGGAGGAA
GCGCGGCACAACATGTCGGAGACCTTCGTGTCCACGTGGCTCATGGACTG
GAAGATCTGGCCAGCCGCTAACCTGGTCATGTTCAGGACAAACATGAAAA
GCGTCCTATCCAAAATCCTGGCGGATCAGATGTGTTACGCCCCCTTCACG
ATCACGAGCTTCGTCACCTACGCGGCCGTGCTGAACGGCGGCGGCGTGAA
GAAGACATGGGAGGAAGCGCGGCACAACATGTCGGAGACCTTCGTGTCCA
CGTGGCTCATGGACTGGAAGATCTGGCCAGCCGCTAACCTGGTCATGTTC
AGGTTTATACCATCCTCCTACCGCCCGTCGTGCGCGAGCTTGGTCTGTGT
AGCCTGGCAAACCTACCTTTCCAGTGTTAGTTTCGACCCGCACGCACCAC
CAACAGCAGCAACGACGACGGCGATAACGACGGCGACAGACCACATCACC
AGTGCAGTCCAAGTCAAGGGTGGGGGTTACGAGGGGATACAACCGGGCTC
GTCCCCGGTCTCCGTAAAGGCCTCTTTACCGCAGCCTGATATGCACCAGC
AACGGCGGCATTTTAATCAGCGGAGAATGACTTCGCGGTATGCGTATTTT
GGGCCGCGCAAGAAATCTGCTTCTGCTAGCGTTGAAGGTAATGGGGCAAT
TGCGGGCGGGAAGGATACCAGAGCGTCAGATATTGTGCGAAGGAGTATTG
GTGAAGGAATGGCGGATGAGGCAGAGGTTCTCACGGGCAAAGATGCTGGG
GGGGAAAAAACGTGTAAGGAATTGTAGGTTTATACCATCCTCCTACCGCC
CGTCGTGCGCGAGCTTGGTCTGTGTAGCCTGGCAAACCTACCTTTCCAGT
GTTAGTTTCGACCCGCACGCACCACCAACAGCAGCAACGACGACGGCGAT
AACGACGGCGACAGACCACATCACCAGTGCAGTCCAAGTCAAGGGTGGGG
GTTACGAGGGGATACAACCGGGCTCGTCCCCGGTCTCCGTAAAGGCCTCT
TTACCGCAGCCTGATATGCACCAGCAACGGCGGCATTTTAATCAGCGGAG
AATGACTTCGCGGTATGCGTATTTTGGGCCGCGCAAGAAATCTGCTTCTG
CTAGCGTTGAAGGTAATGGGGCAATTGCGGGCGGGAAGGATACCAGAGCG
TCAGATATTGTGCGAAGGAGTATTGGTGAAGGAATGGCGGATGAGGCAGA
GGTTCTCACGGGCAAAGATGCTGGGGGGGAAAAAACGTGTAAGGAATTGT
AG back to top
|