mRNA_H-paniculata_contig11423.927.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11423.927.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 2.090e-21 Identity = 45/111 (40.54%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 1 RWLKELGATRVKRRISPCLSLTPRKDRVDFIWDQAARSRITFRSGFQTIHIDESWFSLVHDRDRVGMFPGEERVGSTKAQYKSYIPKLMFICAVSRPDPSRDFDSKIGTWR 333 RW +LGA + RI P LS ++ R+DFI D+ + +H+DESWF L+ ++++V +F GE+ G + ++S++PK+M I A +RPDP+ DFD KIG WR Sbjct: 107 RWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWR 217
BLAST of mRNA_H-paniculata_contig11423.927.1 vs. uniprot
Match: A0A024THY2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024THY2_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 3.150e-11 Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 112 SRITFRSGFQTIHIDESWFSLVHDRDRVGMFPGEERVGSTKAQYKSYIPKLMFICAVSRPDPSRDFDSKIGTW 330 S + F + +H+DE WF+ DR +V + GEE V + K ++PK+MF+CAV+RP P+ FD KIG W Sbjct: 162 SEVPFSGMWDVVHLDEKWFNADKDRRKVYLVDGEE-VKPRGCKSKRFLPKVMFLCAVARPQPALGFDVKIGLW 233
BLAST of mRNA_H-paniculata_contig11423.927.1 vs. uniprot
Match: W4FMD0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FMD0_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 5.690e-9 Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 7 LKELGATRVKRRISPCLSLTPRKDRVDFIW-DQAARSRITFRSGFQTIHIDESWFSLVHDRDRVGMFPGEERVGSTKAQYKSYIPKLMFICAVSRP--DPSRD--FDSKIGTW 330 LK R R+ P L+ R +R++F D + + + F +H+DE WF+ DR +V + GE R+G + K +IPK+MF+ AV+RP D + + FD KIG W Sbjct: 325 LKSGTLERRSSRLKPLLTDENRTERIEFCRSDGSGLAELPFLDMHDVVHLDEKWFNADKDRRKVYLTKGE-RIGRRACKSKRFIPKVMFLAAVARPQYDDAGNLIFDGKIGMW 436
BLAST of mRNA_H-paniculata_contig11423.927.1 vs. uniprot
Match: A0A5D6XR23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR23_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.010e-7 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 1 Query: 136 FQTIHIDESWFSLVHDRDRVGMFPGEERVGSTKAQYKSYIPKLMFICAVSRP--DPSR--DFDSKIGTW 330 F +HIDE WF + + RV + P E AQ+KS++PKLMF+CA++RP DP+ FD IG W Sbjct: 25 FDRVHIDEKWFVVNKTKRRVYLTPTEPNP-QRHAQHKSHLPKLMFLCAITRPRVDPATGASFDRGIGIW 92
BLAST of mRNA_H-paniculata_contig11423.927.1 vs. uniprot
Match: UPI001C27814C (uncharacterized protein LOC121774357 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27814C) HSP 1 Score: 60.8 bits (146), Expect = 1.090e-7 Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 100 QAARSRITFRSGFQTIHIDESWFSLVHDRDRVGMFPGE-ERVGSTKAQYKSYIPKLMFICAVSRP----DPSRDFDSKIG 324 Q + R+ F+S +HIDE+WF + DR + P E E S K+ K YI KLMF+CAVSRP D +D K+G Sbjct: 154 QITQGRVQFQSMHNVVHIDENWFYMTKVSDRYYLLPNEDEPYRSCKS--KRYITKLMFMCAVSRPQFGMDGQATYDGKVG 231
BLAST of mRNA_H-paniculata_contig11423.927.1 vs. uniprot
Match: A0A024U7I1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7I1_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 4.410e-7 Identity = 26/65 (40.00%), Postives = 38/65 (58.46%), Query Frame = 1 Query: 136 FQTIHIDESWFSLVHDRDRVGMFPGEERVGSTKAQYKSYIPKLMFICAVSRPDPSRDFDSKIGTW 330 ++ +H+DE WF+ D + + GEE V + K +IP +MF+CAV+RP FD KIG W Sbjct: 2 WEVVHLDEKWFNADKDCHKEYLVEGEE-VQPRACKSKRFIPNVMFLCAVARPQKDVGFDGKIGLW 65
BLAST of mRNA_H-paniculata_contig11423.927.1 vs. uniprot
Match: A0A6A4YYS6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YYS6_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 4.910e-7 Identity = 31/82 (37.80%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 97 DQAARSRITFRSGFQTIHIDESWFSLVHDRDRVGMFPGEERVGSTKAQYKSYIPKLMFICAVSRP--DPSRD--FDSKIGTW 330 D + + + F +H+DE WF+ DR +V + GE R+G + K +IPK+MF+ AV+RP D + + FD KIG W Sbjct: 130 DGSGLAELPFLDMHDVVHLDEKWFNADKDRRKVYLTKGE-RIGRRACKSKRFIPKVMFLAAVARPQYDDAGNLIFDGKIGMW 210
BLAST of mRNA_H-paniculata_contig11423.927.1 vs. uniprot
Match: UPI000B78B07A (uncharacterized protein LOC110692558 n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78B07A) HSP 1 Score: 58.2 bits (139), Expect = 9.300e-7 Identity = 32/98 (32.65%), Postives = 50/98 (51.02%), Query Frame = 1 Query: 43 ISPCLSLTPRKDRVDFIWDQAARSRITFRSGFQTIHIDESWFSLVHDRDRVGMFPGEERVGSTKAQYKSYIPKLMFICAVSRPDPSRD----FDSKIG 324 + P L+ K+R+ + + F + TIH+DE WF + R + PGE + T + K ++ K+MF+CAV+RP + D FD KIG Sbjct: 130 LKPALTENNIKERLKWCLKAIDQDNGMFNDMYNTIHLDEKWFYMTKGTQRYYLLPGETQPYRT-CKSKRFVTKVMFLCAVARPQFNADGECIFDGKIG 226
BLAST of mRNA_H-paniculata_contig11423.927.1 vs. uniprot
Match: A0A397EFX4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EFX4_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 1.030e-6 Identity = 35/92 (38.04%), Postives = 49/92 (53.26%), Query Frame = 1 Query: 70 RKDRVDFIWDQAARSRIT-FRSGFQTIHIDESWFSLVHDRDRVGMFPGEERVGSTKAQYKSYIPKLMFICAVSRPDPSRD----FDSKIGTW 330 R R+ + A ++ T F S + +H+DE WF+ DR +V + PGE T K +IPK+MF+ AVSRP D FD K+G W Sbjct: 33 RSTRIKPLLTDANKAECTAFCSLWDVVHLDEKWFNADTDRRKVYLVPGEIPPQRTWKS-KRFIPKVMFLAAVSRPRFDHDRGVLFDGKVGMW 123
BLAST of mRNA_H-paniculata_contig11423.927.1 vs. uniprot
Match: A0A397E5D7_9STRA (HTH_Tnp_Tc3_2 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E5D7_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.340e-6 Identity = 30/80 (37.50%), Postives = 42/80 (52.50%), Query Frame = 1 Query: 103 AARSRITFRSGFQTIHIDESWFSLVHDRDRVGMFPGEERVGSTKAQYKSYIPKLMFICAVSRPDPSRD----FDSKIGTW 330 +A + F +H+DE WF+ DR +V + GE G + K +IPK+MF+ AV+RP D FD KIG W Sbjct: 173 SALVELPFSDMIDVVHLDEKWFNADKDRRKVYLTKGETPKGRA-CKSKRFIPKVMFLAAVARPQFDADGNLVFDGKIGMW 251 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11423.927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11423.927.1 >prot_H-paniculata_contig11423.927.1 ID=prot_H-paniculata_contig11423.927.1|Name=mRNA_H-paniculata_contig11423.927.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp RWLKELGATRVKRRISPCLSLTPRKDRVDFIWDQAARSRITFRSGFQTIHback to top mRNA from alignment at H-paniculata_contig11423:3736..4267+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11423.927.1 ID=mRNA_H-paniculata_contig11423.927.1|Name=mRNA_H-paniculata_contig11423.927.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=532bp|location=Sequence derived from alignment at H-paniculata_contig11423:3736..4267+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11423:3736..4267+ >mRNA_H-paniculata_contig11423.927.1 ID=mRNA_H-paniculata_contig11423.927.1|Name=mRNA_H-paniculata_contig11423.927.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at H-paniculata_contig11423:3736..4267+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |