mRNA_H-paniculata_contig1142.915.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1142.915.1 vs. uniprot
Match: D7FVN3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN3_ECTSI) HSP 1 Score: 705 bits (1819), Expect = 2.370e-243 Identity = 414/698 (59.31%), Postives = 480/698 (68.77%), Query Frame = 1 Query: 49 HTLHGRVIVHADLDCFYCQVEHVRLGIPISTPLAVQQWDGLIAVNYEARKFGVKRGDRTEVAKKKCPEITLVHVETIGTSDLHLAGRNGTATDHATTTTSIGATHDQRSCKVSLESRYRVASFAIMSIFQSHCRRVERASIDEAYLDLTEEAAKLCQDMEAGKAPDLANAPDTDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVEHELGFTVSAGIASNKVLAKLASSRNKPNKQTVVPAGAASEMLDTVPLQHVRGLGGKLGESIAAWSKAETASDLKNFDQGELMGKFGPKTGEWLWRICRGMDDEAVTPNLKPKSLSVCKSFAPIRDRETVLQWIRLLCKELAQRISMDRGAWGRRATKLTLQIISSKQGTEGGRANSTHMAKEGWRAPTYT-RSRTIDIPGGTESPTAEALVSEAMSVFDKTKQALPCSRLALTAHEFGGLVSGRGSIASFLRSVPTEEKQEYAISVPTSCHAQKPFWSGGADKGANSSSSLSSAEKKRGSVRSYFNSDGANSVMKNVTANVVAA-TATSGVSNDHSTIVGGSLSTVLDGSGTRKTTPTSFMSGVI------PATERESGDKGGEASCCAKCGKSIRADVMREHLDFHYAEGLQERYSQEVNVAGGMAAVNRTPDASKGSGSSSTRQVEKRKRDEGGRESTPSRSGVGRRASRAGNARPTT--RIDSFFKP 2112 H +HGRVIVHADLDCFYCQVEHVRLGIP S PLAVQQWDGLIAVNYEARK GVKRGDRT AK+KCP+ITLVHVETIG D D A G HD+ +CKVSLE RYR ASFAIM+IFQ+HCRRVERASIDEAYLDLTEEAAKLCQ++EAG A D+A++P+TDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVE ELGFTVSAGIASNKVLAKLASS NKPNKQTVVPAGA+S+MLDTVPL+ VRGLGGKLGE++ +WSKAE ASDLK F Q +L+G FG KTGEWLWR CRGMDDE V PNLKPKSLSVCKSF P+RD E+VL W+RLLC EL+QRI++DR AW RRATKLTLQ+IS K G+ RAN ++ T T RSRT+DIPGG ESPT +LVSEAM+VF KT ALPCSRLALTAHEF GL+SGRGSIASFLR++P + +K W KG + + A G G S+ + +V TA + + VG + +D S R P+S ++G P+ R ++ C KCGK + + ++EHLDFHYAEGLQERY++E +VA MAA S + KRK E G G + +++ RP RIDSFFKP Sbjct: 5 HAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTTAAKQKCPQITLVHVETIGADD---------ELDDA------GTRHDKGACKVSLE-RYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPETDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAEKASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDDEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGS---RANQRDAGGGNGKSNTSTTRSRTVDIPGGGESPTTASLVSEAMAVFAKTDNALPCSRLALTAHEFCGLISGRGSIASFLRALPXXXXXXXXXXXXXTSPLEK--WG---SKGVKPDAKQALAVDPSGQA------GGGRSLPEGDDEDVPGTETAEASIGPRDVPRVGSKDDSRVDRS--RNFQPSSHLAGAACDERTAPSPLRPGYER------CPKCGKVLAPEDLQEHLDFHYAEGLQERYTREGDVARDMAAR-----------MSDREGLPKRKIQEAG----------GGKRAKSQTKRPAAGLRIDSFFKP 643
BLAST of mRNA_H-paniculata_contig1142.915.1 vs. uniprot
Match: A0A0G4ETT1_VITBC (UmuC domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ETT1_VITBC) HSP 1 Score: 330 bits (845), Expect = 1.320e-98 Identity = 210/487 (43.12%), Postives = 281/487 (57.70%), Query Frame = 1 Query: 13 MAMSRSGESMGLHTLHGRVIVHADLDCFYCQVEHVRLGIPISTPLAVQQWDGLIAVNYEARKFGVKRGDRTEVAKKKCPEITLVHVETIGTSDLHLAGRNGTATDHATTTTSIGATHDQRSCKVSLESRYRVASFAIMSIFQSHCRRVERASIDEAYLDLTEEAAKLCQDMEAGKAPDLANAPDTD------LQGTAGHRVD----PTNAFDRALLAGARLTAAMRLAVEHELGFTVSAGIASNKVLAKLASSRNKPNKQTVVPAGAASEMLDTVPLQHVRGLGGKLGESIA-AWSKAETASDLKNFDQGELMGKFGPKTGEWLWRICRGMDDEAVTPNLKPKSLSVCKSFAPIRDRETVLQWIRLLCKELAQRISMDRGAWGRRATKLTLQIISSKQGTEGGRANSTHMAKEGWRAPTYTRSRTIDIPGGTESP---TAEALVSEAMSVFDKTKQ--ALPCSRLALTAHEFGGLVSGRGSIASFLR 1425 M+ G G +L+ RV+ H DLD FYCQVEH RL I PLAVQQWDGLIAVNY AR GV+RGDRT VAK KCP++ LVHVETI + GR+ + D A HD++ KVSL+ RYR AS IM+IF HC +VERASIDEAYLDLT++ + + G P LA D + L G +D ++ + +L+ GA L A +R AV E FTVSAGI+ NK+L+K AS+++KPN+QT+VP + +M+ +PL+ VRGLGGKLGE+++ + A TA DL+ EL F TG WLWR+CRGMDDE V+PNLKPKSL KSF P+R E + +W+ +L +E+ R+ D A RRA L Q H G RSR+ +P G + + + LV+ +++ K + LPCSR+ + A +F + S SI S+ + Sbjct: 1 MSQPAGGRQAGGRSLN-RVVAHLDLDAFYCQVEHRRLNIARDVPLAVQQWDGLIAVNYPARAAGVRRGDRTAVAKGKCPDLVLVHVETISSD-----GRHPGSDDPADR-------HDRQREKVSLD-RYRTASAEIMAIFSRHCPKVERASIDEAYLDLTQQVQAELKRVVGGGGPSLAELVDAEGTRDSTLLAVDGSVLDVDKVSLDSPEASLVVGAVLIARLRKAVLDETQFTVSAGISHNKMLSKQASAKHKPNRQTLVPTSSIDDMMGHLPLRDVRGLGGKLGEAVSRVFPDATTAKDLQAHSLEELKRTFNDGTGTWLWRVCRGMDDEQVSPNLKPKSLLAFKSFRPVRKMEDLERWLGVLAEEVCDRMQADTEAHRRRAKTLMAQ----------------HRGLSG-----AARSRSGPMPRGKDPHGLLSKDELVAAGLALLRKLPEDELLPCSRIGMGAQDFEDIDSQTASITSYFK 452
BLAST of mRNA_H-paniculata_contig1142.915.1 vs. uniprot
Match: A0A7S2SV00_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV00_9STRA) HSP 1 Score: 315 bits (808), Expect = 9.110e-93 Identity = 237/659 (35.96%), Postives = 326/659 (49.47%), Query Frame = 1 Query: 67 VIVHADLDCFYCQVEHVRLGIPISTPLAVQQWDGLIAVNYEARKFGVKRGDRTEVAKKKCPEITLVHVETIGTSDLHLAGRNGTATDHATTTTSIGATH----DQRSCKVSLESRYRVASFAIMSIFQSHCRRVERASIDEAYLDLTEEAAKLCQDMEAGKAPDLANAPD-TDLQGTAGHRVDPTNAF-DRALLAGARLTAAMRLAVEHELGFTVSAGIASNKVLAKLASSRNKPNKQTVVPAGAASEMLDTVPLQHVRGLGGKLGESIAAWSKAET---------ASDLKNFDQGELMGKFGPKTGEWLWRICRGMDDEAVTPNLKPKSLSVCKSFAPIRDRETVLQWIRLLCKELAQRISMDRGAWGRRATKLTLQIISS------KQGTEGGRANSTHMAKEGWRAPT-------------YTRSRTIDIPGGTESPT----------AEALVSEAMSVFDKTKQALPCSRLALTAHEFGGLVSGRGSIASFLRSVPTEEKQEYAISVPTSCHAQKPFWSGGADKGANSSSSLSSAEKKRGSVRSYFNSDGANSVMKNVTANVVAATATSGVSNDHSTIVGGSLSTVLDGSGTRKTTPTSFMSGVIPATERESGDKGGEASCCAKCGKSIRADVMREHLDFHYAEGLQERY-SQEV 1908 VI+H DLDCFYCQVEH RL IP+STPLAVQQW+GLIAVNY AR FGV+RGDR +VAK KCP + VHVETIG D +G T H T + A D+ +CKVSLE RYR ASF ++ + + C VERASIDE Y D+TE A + + D+ +P+ T+ Q G +DPT+ D LL GA +R + E FTVSAGIA K+ AK+AS+++KPNKQT+VP + E++ T+ L +RGLGGKLGE ++ + +++ A L+ + L+ +FG KTG WL RICRG+D + V+PNL+PKS++ KSF+ I +L+W+ +LC EL RI+ D + RR LTLQ S+ K G + T M P ++ R G +P AE L SE + + A P +L L + G VPT A+ V C +E K V S F +K +A +++ S+ H+ G R SG PA + +GD + C +CG SI D ++EH+DFH+A +Q+++ SQE Sbjct: 1 VILHLDLDCFYCQVEHRRLSIPMSTPLAVQQWEGLIAVNYAARAFGVRRGDRVDVAKAKCPALVFVHVETIG-EDGAAGLPSGEETHHRGTVGAPSAGQAQAPDRETCKVSLE-RYRSASFEVLRVIDAACPAVERASIDEVYCDVTEAALRRLKS-------DMPPSPEQTETQVVGGCPLDPTDTHGDALLLMGATFADELRRKIREETTFTVSAGIAHGKMFAKIASAKHKPNKQTIVPFASTEELMRTIELSDIRGLGGKLGEEVSTFLRSQDTPKTDGTFRAIALQAVPERLLIRQFGEKTGRWLHRICRGLDTDPVSPNLRPKSINCFKSFSTITAMAPLLRWLDVLCGELTDRIAADHALFKRRPRVLTLQHRSTLRPDHLKNWKAGVTSELTGMRSRSAALPPSLVSLILACYSSKQSKKRKRQSVDGAATPLVDSIQVHSGDAEPLGSEGETTPLTSSPAFPAELQSLARLVMSKLENDSG--------VPTLPCSRIALGVSDFC-----------------------SESKASRVLSDF--------LKAQPCRKTSAESSAESSDGHT--------------GPRPGHDAVGDSGS-PA-QAAAGDGNLVRTTCERCGASIALDAIQEHMDFHFAADVQQQWRSQEA 595
BLAST of mRNA_H-paniculata_contig1142.915.1 vs. uniprot
Match: A0A7S3C888_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C888_9CHLO) HSP 1 Score: 259 bits (661), Expect = 4.710e-74 Identity = 169/443 (38.15%), Postives = 239/443 (53.95%), Query Frame = 1 Query: 64 RVIVHADLDCFYCQVEHVRLGIPISTPLAVQQWDGLIAVNYEARKFGVKRGDRTEVAKKKCPEITLVHVETIGTSDLHLAGRNGTATDHATTTTSIGATHDQRSCKVSLESRYRVASFAIMSIFQSHCRRVERASIDEAYLDLTEEAAKLCQDM--EAGKAPDLANAPDTDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVEHELGFTVSAGIASNKVLAKLASSRNKPNKQTVVPAGAASEMLDTVPLQHVRGLGGKLGESIAA-WSKAETASDLKNFDQGELMGKFGPKTGEWLWRICRGMDDEAVTPNLKPKSLSVCKSFAPIRDRETVLQWIRLLCKELAQRISMDRGAWGRRATKLTLQIISSKQGTEGGRANSTHMAKEGWRAPTYTRSRTIDIPGGTESPTAEALVSEAMSVFDKTK-QALPCSRLALTAHEF 1380 RVI+H DLD FYCQVEH RLGI + PLAVQQW GLIAVNY AR GV R AK CP++ LVHVETIG + G+ +GA + + +RYR ASF ++++ + ++ERASIDE Y+D+T L D +G D ++ G ++P++ D L+ GA++ +R A++ E + +SAGI+ NK+L+KLAS+ NKPNKQT+VP A ++ T+ + + GLGGKLG+ + + +TA DL+ + +L+ G KT WL ++CRG D V PNL PKSL+ CKSF P + V +W+ +L +EL+ RI D +GR L L SSK + +G + + R L AM +F+K + + LPCSRLAL A F Sbjct: 5 RVILHLDLDAFYCQVEHKRLGIDRNVPLAVQQWAGLIAVNYPARANGVGRFCDINEAKTACPDLRLVHVETIGNTK---GGK-------------VGAVEANKGTSKASLARYRRASFEVINVMKRFSDKIERASIDEVYIDVT----ALVDDRLRRSGDFSDGGGLEWSESHVAEGAALNPSSEHDIRLIMGAKVCKEIRDAIKAETEYEMSAGISHNKLLSKLASAMNKPNKQTIVPTSAVPSLMSTLEYKQINGLGGKLGDRLVQLFPGLKTALDLQGVPREDLVRGLGEKTAGWLQQLCRGDCDSDVKPNLLPKSLNACKSF-PASELGAVKKWLLILAEELSDRILEDHEDFGRTPRLLVLHARSSK--------TYEQHSSQGPMPAKWAKER---------------LFEHAMRLFEKIQGECLPCSRLALGAAGF 403
BLAST of mRNA_H-paniculata_contig1142.915.1 vs. uniprot
Match: A0A5B8MBX0_9CHLO (DNA polymerase eta/iota n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MBX0_9CHLO) HSP 1 Score: 251 bits (641), Expect = 4.390e-70 Identity = 176/444 (39.64%), Postives = 241/444 (54.28%), Query Frame = 1 Query: 64 RVIVHADLDCFYCQVEHVRLGIPISTPLAVQQWDGLIAVNYEARKFGVKRGDRTEVAKKKCPEITLVHVETIG-TSDLHLAGRNGTATDHATTTTSIGATHDQRSCKVSLESRYRVASFAIMSIFQ--SHCRRVERASIDEAYLDLTEEAAKLCQDMEAGKAPDLANAPDTDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVEHELGFTVSAGIASNKVLAKLASSRNKPNKQTVVPAGAASEMLDTVPLQHVRGLGGKLGESIAA-WSKAETASDLKNFDQGELMGKFGPKTGEWLWRICRGMDDEAVTPNLKPKSLSVCKSFAPIRDRETVLQWIRLLCKELAQRISMDRGAWGRRATKLTLQIISSKQGTEGGRANSTHMAKEGWRAPTYTRSRTIDIPGGTESPTAEALVSEAMSVFDKTK-QALPCSRLALTAHEF 1380 +VI+H DLD FY QVEH RLGI S PLAVQQW GLIAVNY AR GV R + AK +CP++ LVHVETIG TSD GR G G ++ + K L +RYR AS ++ Q S +ERASIDE Y+D T + + +E G + L +G + ++ + D L+ GA+L +R AV+ E + +SAGI+ NK+L+KLAS+ NKPN QT+VP+ A ++D + + GLGGKLGE + + +T+ DL+ Q +L G KTG W+ +CRG DE V PNL PKSL+ CKSF P E V +W+ +L +ELA RI DR + R L L + H ++P +P +S T + L + +F+K + + LPCSRLAL A+ F Sbjct: 5 KVILHLDLDAFYAQVEHRRLGIDRSVPLAVQQWAGLIAVNYAARSRGVGRFCDIQEAKSRCPDLKLVHVETIGNTSD----GRMG------------GVAANKATSKACL-NRYRSASTEVLKAMQRFSDVLLIERASIDEWYIDATALVEERLEGVEEGGSCSLDWRESHVCKGAS---LNASLDCDVRLIVGAKLCKEIRDAVKAETEYEMSAGISHNKMLSKLASAMNKPNMQTIVPSSAVEALMD-LDYTEINGLGGKLGEKLKTLYPNLKTSRDLQTIGQEDLARSLGQKTGAWIHALCRGEVDEPVKPNLLPKSLNACKSF-PASPIEQVHKWLLILAEELADRIEQDRQDFARMPRFLVLHA-----------RGAVHFRDHSSQSP---------MP---KSATRDRLYEVGLKLFEKIQGECLPCSRLALGANSF 403
BLAST of mRNA_H-paniculata_contig1142.915.1 vs. uniprot
Match: A0A7S3EFR3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFR3_9RHOD) HSP 1 Score: 249 bits (636), Expect = 1.170e-69 Identity = 176/459 (38.34%), Postives = 235/459 (51.20%), Query Frame = 1 Query: 64 RVIVHADLDCFYCQVEHVRLGIPISTPLAVQQWDGLIAVNYEARKFGVKRGDRTEVAKKKCPEITLVHVETIGTSDLHLAGRNGTATDHATTTTSIGATHDQRSCKVSLESRYRVASFAIMSIFQSHCRRVERASIDEAYLDLTEEAAKLC----QDMEAGKAPDLANAPDTDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVEHELGFTVSAGIASNKVLAKLASSRNKPNKQTVVPAGAASEMLDTVPLQHVRGLGGKLGESIAAWSKAETASDLKNFDQGELMGKFGPKTGEWLWRICRGMDDEAVTPNLKPKSLSVCKSFAPIRDRETVLQWIRLLCKELAQRISMDRGAWGRRATKLTLQIISSKQGTEGGRANSTHMAKEGWRAPTYTRSRTIDIPGGTESPTAEALVSEAMSVFDKTKQ-ALPCSRLALTAHEFGGLVSGRGSIASFLR 1425 RVI H DLD FY QVE VRLG+ PL VQQW+G+IAVNY ARK GV R D+ KKKCPE LVHVE + ++ G+ +Q KVSL +RYR AS I + RVERASIDEAYLDLT+ K D G+A D G +DP+ D +L+ G+ +T+ +R + ELG+T SAG+A NK LAKLAS+ NKPN QT+VP +++ +P + +R LGGKLG + A ETA ++ + EL +FG K +++ I RG+D V P KPKS+ KS +D + V +W+R+L EL R+ D R A L +IS K G+ P T S+T+ +P G + A L E S+ T + P + L LTA F + SI FL+ Sbjct: 7 RVIAHVDLDAFYAQVEMVRLGVDEDAPLCVQQWEGVIAVNYPARKRGVTRFDKAGEVKKKCPECILVHVEVL--TEEREDGK------------------EQPKAKVSL-ARYREASARIFKLILREIERVERASIDEAYLDLTDMVKKRRVIRDNDENLGRASDCI---------VLGEELDPSRKDDLSLIIGSEITSDLRRMIREELGYTCSAGVAHNKTLAKLASAMNKPNCQTLVPNSCVQGLMEKLPFRKIRQLGGKLGVELEALG-VETAGQVQCYKLEELSRRFGQKNAHFVFDIVRGIDRSEVVPRSKPKSMLAAKSLPGEQDWDGVNRWLRMLASELHDRMLFDEEVNVREARNL---VISFKSGS----------------VP-RTTSKTLPMPRGQSNRLARML-EEIQSLLRITPSFSFPIAFLGLTATNFEEKPADNESINKFLK 413
BLAST of mRNA_H-paniculata_contig1142.915.1 vs. uniprot
Match: A0A1D2AF01_AUXPR (UmuC domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AF01_AUXPR) HSP 1 Score: 249 bits (635), Expect = 7.220e-69 Identity = 174/475 (36.63%), Postives = 249/475 (52.42%), Query Frame = 1 Query: 58 HGRVIVHADLDCFYCQVEHVRLGIPISTPLAVQQWDGLIAVNYEARKFGVKRGDRTEVAKKKCPEITLVHVETIGTSDLHLAGRNGTATDHATTTTSIGATHDQRSCKVSLESRYRVASFAIMSIFQSHCRR--VERASIDEAYLDLTEEAAKLCQDMEA--GKAPDLANAPDTDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVEHELGFTVSAGIASNKVLAKLASSRNKPNKQTVVPAGAASEMLDTVPLQHVRGLGGKLGESIAAWSKAETASDLKNFDQGELMGKFGPKTGEWLWRICRGMDDEAVTPNLKPKSLSVCKSFAPIRDRETVLQWIRLLCKELAQRISMDRGAWGRRATKLTLQIISSKQGTEGGRANSTHMAKEGWRAPTYTRSRTIDIPGGTESPTAEALVSEAMSVF--DKTKQALPCSRLALTAHEFGGL-VSGRGSIASFLRSVPTEEKQEYAI 1461 H RVI+H D DC+Y QVE RLGIP TP AVQQW+GLIA+NY AR G+ R R A+ + PE+ LVHVET+G H A + GA RS + + RYR ++ ++++ + +E+ASIDE Y+D+T E + EA G P+ + G ++P + F+R L GA L A +R A+ +LG+T SAGIASNK+LAK+AS+ NKPN+QT+VP AA ++ +PL +R GGKLG+S+AA A TA D+ L +FGP+ ++ +G+ E V KS+ K+F RD + + W +L ELA R+ +D RR LT+ + T+G + M + P G + P+ + L A S F ALPCSRLAL+A +F + +G +I FL S P + +Q +AI Sbjct: 10 HSRVILHIDFDCYYAQVEQKRLGIPRDTPCAVQQWEGLIAINYAARARGITRHMRVHEARARVPELVLVHVETVGADAPHGADAXXXXXX------AKGAPAPNRSTQKASLERYRRSTAEVLTLLHAQLPGAVIEKASIDEVYIDVTAEVERALSRHEAHGGLLPEADSV-------VIGGPLNPGSEFERRLGQGAGLAARLRAALFEQLGYTSSAGIASNKLLAKVASAMNKPNRQTIVPPRAALSLMQNLPLPKLRNFGGKLGDSLAALGCA-TAGDVLALAPEVLERRFGPERAAFISAAVQGISMEPVKAREVTKSMLAAKTFYNTRDLDVIKSWFVVLANELAPRLGIDAEENLRRPKNLTIYYRTE---TDGEHSRVFLMPR---------------FPPG-QGPSPQVLAEAAYSYFLTGCMADALPCSRLALSATDFTPVPAAGTSAITRFL-SAPAQRQQGHAI 450
BLAST of mRNA_H-paniculata_contig1142.915.1 vs. uniprot
Match: A0A1X2HCH0_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HCH0_SYNRA) HSP 1 Score: 249 bits (636), Expect = 8.240e-69 Identity = 175/503 (34.79%), Postives = 240/503 (47.71%), Query Frame = 1 Query: 64 RVIVHADLDCFYCQVEHVRLGIPISTPLAVQQWDGLIAVNYEARKFGVKRGDRTEVAKKKCPEITLVHVETIGTSDLHLAGRNGTATDHATTTTSIGATHDQRSCKVSLESRYRVASFAIMSIFQSHCRRVERASIDEAYLDLTEEAAKL------------------------------CQDMEAGKAPDLANAPDTDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVEHELGFTVSAGIASNKVLAKLASSRNKPNKQTVVPAGAASEMLDTVPLQHVRGLGGKLGESIAAWSKAETASDLKNFDQGELMGKFGPKTGEWLWRICRGMDDEAVTPNLKPKSLSVCKSFAP-IRDRETVLQWIRLLCKELAQRISMDRGAWGRRATKLTLQIISSKQGTEGGRANSTHMAKEGWRAPTYTRSRTIDIPGGTESPTAEALVSEAMSVFDKTKQALPCSRLALTAHEF-GGLVSGRGSIASFLRSVPTEEKQEYAISVPTS 1476 RVIVH DLDCFYCQVE VR G+P P AVQQW GLIAVNY AR GV R E A+K CPEI L+HV T ++ T+ ATH KVSL+ YR AS I +IF+ HC V++ +DE ++DLTE +L + E+ + L N D D + + DP D L GA L AA+R + EL +T SAGIA NKV+AKL SS+NKPNKQT++ A + + P +R LGGKLG + + A DL + +L +FG TG WL+ + RG+D+E VT PKS+ KSF P ++ E + +W L EL R+ ++ + LT+ S++ T R+R+ +P T+ + + L A+ +F K + ALPC L+L A G SI+ F + E + + P S Sbjct: 13 RVIVHIDLDCFYCQVEQVRRGVPTHVPAAVQQWQGLIAVNYAARAAGVTRHANIEDARKACPEIQLLHVATYAENE----------TEWKYHARPSRATH-----KVSLDP-YREASKKIFTIFKRHCDTVQKIGLDECFMDLTETVNELMTKRYPTAALAADDDLCDQPIDWNKLGVTIASEDESERRRQLDNDVDADHEEESWR--DPATWQDLQLAIGAELAAAIRQEIYDELSYTCSAGIAHNKVVAKLCSSKNKPNKQTILRHCATAAFMRDTPFTKIRNLGGKLGTEVETELNIDKAGDLWKYTVNDLQQRFGESTGLWLYNVARGIDNEEVTVTKAPKSIMASKSFRPPVKSSEEMQRWFATLAAELHTRMMLNFDEFDAWPKTLTIHYRSTQD--------------------TTYRTRSCAMPRRTDLTSPDKLAQRAIILFGKAEDALPCVGLSLNAVAMQSSQTVGNHSISEFFKQGAKEVARMSGETPPRS 477
BLAST of mRNA_H-paniculata_contig1142.915.1 vs. uniprot
Match: A0A0U9HQB4_KLENI (Putative Y-family DNA polymerase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HQB4_KLENI) HSP 1 Score: 256 bits (654), Expect = 1.930e-68 Identity = 165/369 (44.72%), Postives = 201/369 (54.47%), Query Frame = 1 Query: 64 RVIVHADLDCFYCQVEHVRLGIPISTPLAVQQWDGLIAVNYEARKFGVKRGDRTEVAKKKCPEITLVHVETIGTSDLHLAGRNGTATDHATTTTSIGATHDQRSCKVSLESRYRVASFAIMSIFQSHCRRVERASIDEAYLDLTEEA-AKLCQDMEAGKAPDLANAPDTDLQGTAGHRV------------------DPTNAFDRALLAGARLTAAMRLAVEHELGFTVSAGIASNKVLAKLASSRNKPNKQTVVPAGAASEMLDTVPLQHVRGLGGKLGESIAAWSKAETASDLKNFDQGELMGKFGPKTGEWLWRICRGMDDEAVTPNLKPKSLSVCKSFAPIRDRETVLQWIRLLCKELAQRISMD 1113 RVIVH DLD FY VE VRLG+P+ PLAVQQW+GLIAVNY AR GV R AK+KCP++ LVHVE IG S G KVSLE RYR AS I+ IF E+ASIDEAYLDLT + A L Q E AP N P+T + DP+N +DR LLAGA + A MR AV HELG+T SAGIA NK+LAKLAS+ NKP KQTVV A ++ P++ +R LGGK+G+ + ETA D++ + L+ K G K G W++R RG+ DE V KS+ KS++ E V W+RLL ELA RI D Sbjct: 3 RVIVHVDLDAFYAAVEQVRLGLPLDQPLAVQQWEGLIAVNYAARAKGVTRFMAIAEAKQKCPDLRLVHVEVIGGSSKREEG------------------------KVSLE-RYRQASANILPIFHRFSPLCEKASIDEAYLDLTAQVEALLNQSPEPETAPVYDN-PETASASEKSEPISMASVQSRSDVIVLDGPLDPSNEYDRRLLAGATIVAQMREAVFHELGYTCSAGIAPNKLLAKLASAMNKPYKQTVVTPRAIPGLMKDFPMRKIRNLGGKMGKELCDTLGCETAGDVQKIPEAVLIEKLGDKMGPWVFRAVRGIHDEPVQTRQISKSMLAAKSYSLTNSIEDVRHWLRLLSMELAARIEYD 345
BLAST of mRNA_H-paniculata_contig1142.915.1 vs. uniprot
Match: A0A2R6VZP2_MARPO (UmuC domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6VZP2_MARPO) HSP 1 Score: 251 bits (641), Expect = 1.360e-67 Identity = 147/360 (40.83%), Postives = 207/360 (57.50%), Query Frame = 1 Query: 49 HTLHGRVIVHADLDCFYCQVEHVRLGIPISTPLAVQQWDGLIAVNYEARKFGVKRGDRTEVAKKKCPEITLVHVETIGTSDLHLAGRNGTATDHATTTTSIGATHDQRSCKVSLESRYRVASFAIMSIFQSHCRRVERASIDEAYLDLTEEAAKL----CQ-DMEAGKAPDLANAPDTDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVEHELGFTVSAGIASNKVLAKLASSRNKPNKQTVVPAGAASEMLDTVPLQHVRGLGGKLGESIAAWSKAETASDLKNFDQGELMGKFGPKTGEWLWRICRGMDDEAVTPNLKPKSLSVCKSFAPIRDRETVLQWIRLLCKELAQRISMD 1113 H H V++H DLDCFY VEHVRLGIP PLAVQQW+GLIA+NY AR G+ R +R A +KCPE+ VHVETIG ++ +GT+ HA KVSLE RYR AS + IF+ E+ASIDEAYLD+T K+ C D E + + N + + P N++DR +LAGA + +R AV ELG+T S GIA+NK+LAK+AS++NKP+KQT+VP A ++ ++PL+ V+ LGGKLGE + TA + + L+G FG + G ++W RG+ ++ V KS+ K+F ++ + W+ +L +EL+ R+ D Sbjct: 14 HNTHSSVVLHVDLDCFYAAVEHVRLGIPREVPLAVQQWEGLIAINYAARAAGITRHERVHQAMRKCPELKCVHVETIGDGSGNV---DGTSRGHA---------------KVSLE-RYRQASANVFKIFRRFSDLCEKASIDEAYLDVTSRVEKMMIQGCNWDQELHRL--IGNQEEGSEMIVLDGPLVPFNSYDRRMLAGAIIAEKIRAAVRSELGYTCSVGIATNKLLAKIASAKNKPDKQTLVPPRAVPYLMQSMPLRKVKLLGGKLGEEMTEKWGVSTAGEAQAVPLPALVGCFGERLGNYVWNAVRGIQNDKVQVKQVSKSMLAAKTFHSTKELSDIRMWLSILAEELSVRMLRD 352 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1142.915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1142.915.1 >prot_H-paniculata_contig1142.915.1 ID=prot_H-paniculata_contig1142.915.1|Name=mRNA_H-paniculata_contig1142.915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=702bp MAMSRSGESMGLHTLHGRVIVHADLDCFYCQVEHVRLGIPISTPLAVQQWback to top mRNA from alignment at H-paniculata_contig1142:2125..9214- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1142.915.1 ID=mRNA_H-paniculata_contig1142.915.1|Name=mRNA_H-paniculata_contig1142.915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7090bp|location=Sequence derived from alignment at H-paniculata_contig1142:2125..9214- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1142:2125..9214- >mRNA_H-paniculata_contig1142.915.1 ID=mRNA_H-paniculata_contig1142.915.1|Name=mRNA_H-paniculata_contig1142.915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4212bp|location=Sequence derived from alignment at H-paniculata_contig1142:2125..9214- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |