mRNA_H-paniculata_contig1140.900.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1140.900.1
Unique NamemRNA_H-paniculata_contig1140.900.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A6H5KD01_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD01_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 1.030e-108
Identity = 161/212 (75.94%), Postives = 175/212 (82.55%), Query Frame = 1
Query:    1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADRTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636
            VTA +VYANYGRPEDF  LE  GVSVDG IVI+RYG CFRGLKAMNAQ RGAVG IIYSDPQQ G   GPTYPDGGWRPS SVQRGS  FNSLC GDPSRAA  R+VE++CGFS +EL P +PVMPISYGDAEP LR LGG  AP  FQGGL+FTYT+GPS    +V+M VENEEHVGPVWNVIGT+PG LP   DRP++LGNHRDAWVFGA
Sbjct:  148 VTAPLVYANYGRPEDFRELEGMGVSVDGAIVIVRYGHCFRGLKAMNAQERGAVGTIIYSDPQQDGFKRGPTYPDGGWRPSSSVQRGSCQFNSLCAGDPSRAANPRSVEKVCGFSKEELVPAIPVMPISYGDAEPLLRALGGAAAPGRFQGGLDFTYTVGPSS-GTMVKMVVENEEHVGPVWNVIGTVPGALPEELDRPVVLGNHRDAWVFGA 358          
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: R1F4J3_EMIHU (PA domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F4J3_EMIHU)

HSP 1 Score: 275 bits (702), Expect = 1.540e-88
Identity = 132/213 (61.97%), Postives = 156/213 (73.24%), Query Frame = 1
Query:    1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADRTV-EEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636
            VTA +VYANYG PEDFDAL+A+GVSV+G IV++RYGKCFRGLKA NA+ARGAV  +IYSDP + G   G  YP+G WRP  SVQRGS+ F SLC GDPSRA       EE+CG++  EL P +PV+P+SY DA P LR LGG  AP  F+G LN TY LGPS      R+ V N    GPVWNVI T+ GTLP  +D+PI+LGNHRDAWV+GA
Sbjct:  155 VTAPVVYANYGFPEDFDALQASGVSVEGAIVLMRYGKCFRGLKARNAEARGAVAALIYSDPAEDGFGQGSVYPEGPWRPPSSVQRGSIQFISLCPGDPSRAYLPAGASEELCGYTQSELIPTIPVLPLSYADAAPLLRSLGGPEAPAPFRGALNLTYRLGPSAGGVRARLAVRNRFEKGPVWNVIATLRGTLPEAEDQPILLGNHRDAWVYGA 367          
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A812LK54_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812LK54_9DINO)

HSP 1 Score: 272 bits (695), Expect = 7.340e-84
Identity = 132/214 (61.68%), Postives = 156/214 (72.90%), Query Frame = 1
Query:    1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAAD--RTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636
            VTA +VYAN+G PEDF AL+AAGV V GTI ++RYGKCFRGLKAMNAQ  GA+   IYSDP+Q G   G  YP G WRP  SVQRGS+ F SLC GDP+RA A   ++VEE+CG+S +EL P +PV+PISYGDA  FL  LGG  AP  F+G LN TY  GP+     VRM V+N     PVWNV+G IPGTLP   D+P++LGNHRDAWV+GA
Sbjct:  160 VTAPVVYANFGLPEDFAALKAAGVDVRGTIALMRYGKCFRGLKAMNAQKAGALAAAIYSDPEQDGYAQGSVYPYGPWRPESSVQRGSIQFISLCAGDPTRAYAPHGKSVEELCGYSREELIPQIPVLPISYGDAAIFLDSLGGKEAPASFKGALNITYRTGPTQMQYKVRMQVDNHFQSSPVWNVVGKIPGTLPADLDQPVLLGNHRDAWVYGA 373          
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A812TNU8_SYMPI (LAMP1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812TNU8_SYMPI)

HSP 1 Score: 265 bits (678), Expect = 2.130e-81
Identity = 130/214 (60.75%), Postives = 151/214 (70.56%), Query Frame = 1
Query:    1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADR--TVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636
            VTA +VYAN+G PEDF AL+AAGV V G I ++RYGKCFRGLKAMNAQ  GA+  +IYSDP+Q G   G  YP G WRP  SVQRGS+ F SLC GDP+RA A     VEE+CG+S  EL P +PV+PISYGDA  FL  LGG  AP  F+G LN TY  GP+     V + V N     PVWNVIG IPGTLP   D+P++LGNHRDAW+FGA
Sbjct:  156 VTAPVVYANFGLPEDFAALKAAGVQVRGAIALMRYGKCFRGLKAMNAQKAGALAAVIYSDPEQDGFAKGSVYPYGPWRPESSVQRGSIQFISLCAGDPTRAYAPHGMDVEELCGYSEKELIPQIPVLPISYGDAAIFLDSLGGPEAPPSFRGALNITYRTGPTETKYKVHLQVANHFQSSPVWNVIGKIPGTLPAELDQPVVLGNHRDAWIFGA 369          
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A1Q9F2F1_SYMMI (N-acetylated-alpha-linked acidic dipeptidase 2 n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9F2F1_SYMMI)

HSP 1 Score: 272 bits (695), Expect = 5.460e-81
Identity = 132/214 (61.68%), Postives = 156/214 (72.90%), Query Frame = 1
Query:    1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAAD--RTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636
            VTA +VYAN+G PEDF AL+AAGV V GTI ++RYGKCFRGLKAMNAQ  GA+   IYSDP+Q G   G  YP G WRP  SVQRGS+ F SLC GDP+RA A   ++VEE+CG+S +EL P +PV+PISYGDA  FL  LGG  AP  F+G LN TY  GP+     VRM V+N     PVWNV+G IPGTLP   D+P++LGNHRDAWV+GA
Sbjct:  160 VTAPVVYANFGLPEDFAALKAAGVDVRGTIALMRYGKCFRGLKAMNAQKAGALAAAIYSDPEQDGYAQGSVYPYGPWRPESSVQRGSIQFISLCAGDPTRAYAPHGKSVEELCGYSREELIPQIPVLPISYGDAAIFLDSLGGKEAPASFKGALNITYRTGPTQMQYKVRMQVDNHFQSSPVWNVVGKIPGTLPADLDQPVLLGNHRDAWVYGA 373          
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A812JPG4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JPG4_9DINO)

HSP 1 Score: 272 bits (695), Expect = 1.100e-80
Identity = 132/214 (61.68%), Postives = 156/214 (72.90%), Query Frame = 1
Query:    1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAAD--RTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636
            VTA +VYAN+G PEDF AL+AAGV V GTI ++RYGKCFRGLKAMNAQ  GA+   IYSDP+Q G   G  YP G WRP  SVQRGS+ F SLC GDP+RA A   ++VEE+CG+S +EL P +PV+PISYGDA  FL  LGG  AP  F+G LN TY  GP+     VRM V+N     PVWNV+G IPGTLP   D+P++LGNHRDAWV+GA
Sbjct:  160 VTAPVVYANFGLPEDFAALKAAGVDVRGTIALMRYGKCFRGLKAMNAQKAGALAAAIYSDPEQDGYAQGSVYPYGPWRPESSVQRGSIQFISLCAGDPTRAYAPHGKSVEELCGYSREELIPQIPVLPISYGDAAIFLDSLGGKEAPASFKGALNITYRTGPTQMQYKVRMQVDNHFQSSPVWNVVGKIPGTLPADLDQPVLLGNHRDAWVYGA 373          
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A2R5G5K5_9STRA (Transferrin receptor protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5K5_9STRA)

HSP 1 Score: 256 bits (653), Expect = 2.960e-78
Identity = 125/210 (59.52%), Postives = 146/210 (69.52%), Query Frame = 1
Query:   10 QMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADRTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPS-GPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636
            +MVYANYGRPEDF+ LE  G+ V G IV++RYG+CFRGLK MNAQA  A  V+I+SDP+  G   G  YPDG WRP+ SVQRGS  FNSLC GDP+RAA+    +  CG   DEL P +P +PISY D  P L  LGG  AP GFQGGLN TY LGPS G    V   V N   V P+WNVI  IPG+L   +D+PI++GNHRDAWVFGA
Sbjct:  122 EMVYANYGRPEDFEELEKRGIHVAGKIVLVRYGQCFRGLKIMNAQAFNASAVLIFSDPEDDGFGKGKVYPDGPWRPASSVQRGSAQFNSLCAGDPARAASGFDSKSRCGLERDELIPSIPAIPISYEDVTPLLERLGGPEAPHGFQGGLNLTYRLGPSSGWEATVE--VNNTREVKPIWNVIAEIPGSLEADEDQPIVIGNHRDAWVFGA 329          
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A7S0Y2P3_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y2P3_HEMAN)

HSP 1 Score: 253 bits (647), Expect = 4.320e-78
Identity = 122/213 (57.28%), Postives = 153/213 (71.83%), Query Frame = 1
Query:    1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADRTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGT-LPIGQDRPIILGNHRDAWVFGA 636
            VTA++VYANYGRP+DF+ALE  GV+V G +V++RYG+CFRGLK MNA+ RGA  VIIYSDP   G T G  YPDG WRP   VQRGS  F SLC GD +R  +  +  ++CG++ ++L P +PV+P+S+GDAEP LR LGG  AP GFQGGL+F Y LGP GPS +VR+ VE+      +WNV   +PG       DR ++LGNHRDAWVFGA
Sbjct:  151 VTAEVVYANYGRPDDFEALEGLGVTVKGKVVMVRYGRCFRGLKVMNAERRGAAAVIIYSDPADDGFTQGKVYPDGPWRPRTGVQRGSAQFASLCAGDVARIYSKASALDLCGYATEDLVPKIPVLPMSWGDAEPILRRLGGADAPGGFQGGLDFPYKLGP-GPS-VVRVMVESTMKARAIWNVCAVVPGKHYGTEDDRMVLLGNHRDAWVFGA 361          
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: W7TMG7_9STRA (Glutamate carboxypeptidase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMG7_9STRA)

HSP 1 Score: 255 bits (652), Expect = 2.370e-77
Identity = 128/222 (57.66%), Postives = 158/222 (71.17%), Query Frame = 1
Query:    1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADR---TVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGT-----VAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQ--DRPIILGNHRDAWVFGA 636
            V A +VYAN+GRPEDF+ L  AGV V+G+IV++RYG+CFRGLK MNA+ RGAVG +IYSDP+Q G   GPTYP+G WRP+F VQRGSV F SLC GDP R A      + E++CG++ ++L+P +PV+PISYGDA PFL+ L        VAP  FQG LN TY LGPS   + V M   N E VG VWNVIG +  +L  G+  DR ++LGNHRDAWV GA
Sbjct:  169 VKAPLVYANFGRPEDFEVLAEAGVIVEGSIVLMRYGECFRGLKVMNAEKRGAVGALIYSDPEQDGYALGPTYPEGPWRPAFGVQRGSVQFLSLCAGDPGRTALAEDGGSAEDVCGYATEDLKPKIPVLPISYGDATPFLQSLANAGAESPVAPASFQGALNLTYHLGPS--RDRVVMATHNREVVGTVWNVIGVVE-SLHYGRARDRVVVLGNHRDAWVDGA 387          
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A7S3LRD1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRD1_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.960e-74
Identity = 117/211 (55.45%), Postives = 144/211 (68.25%), Query Frame = 1
Query:   10 QMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADRTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLN--FTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636
            ++VYANYG+PEDFD LE+ G+ V G +VI+RYGKCFRGLK MNAQ RGA+G+++YSDP   G   G  YPDG WRP  SVQRGS  FNSLC GDP RA ++ T E++CG+  +E+ P +P +PISY DA P L  L G   P  + GGL     Y  GPS     V +   N   V P+WNVI TI GTLP   D+P++LGNHRDAWV+GA
Sbjct:   82 KLVYANYGKPEDFDVLESEGIDVMGKVVIVRYGKCFRGLKIMNAQRRGAIGLLLYSDPLDDGYRVGKVYPDGPWRPETSVQRGSAQFNSLCPGDPQRAHSEATTEQLCGYKPNEVIPSIPAIPISYHDAIPLLLSLQGDEVPPDWVGGLTDKLVYRFGPS--KGTVSLGTNNTFKVTPIWNVITTIKGTLPKELDQPVVLGNHRDAWVYGA 290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD01_9PHAE1.030e-10875.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
R1F4J3_EMIHU1.540e-8861.97PA domain-containing protein (Fragment) n=1 Tax=Em... [more]
A0A812LK54_9DINO7.340e-8461.68Hypothetical protein n=1 Tax=Symbiodinium necroapp... [more]
A0A812TNU8_SYMPI2.130e-8160.75LAMP1 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A1Q9F2F1_SYMMI5.460e-8161.68N-acetylated-alpha-linked acidic dipeptidase 2 n=2... [more]
A0A812JPG4_9DINO1.100e-8061.68Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A2R5G5K5_9STRA2.960e-7859.52Transferrin receptor protein 2 n=1 Tax=Hondaea fer... [more]
A0A7S0Y2P3_HEMAN4.320e-7857.28Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
W7TMG7_9STRA2.370e-7757.66Glutamate carboxypeptidase n=4 Tax=Monodopsidaceae... [more]
A0A7S3LRD1_9STRA1.960e-7455.45Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1140contigH-paniculata_contig1140:3974..6011 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.9
Seed ortholog evalue4.4e-88
Seed eggNOG ortholog2880.D7FIJ9
KEGG koko:K01301
Hectar predicted targeting categoryother localisation
EggNOG free text desc.exopeptidase activity
EggNOG OGsCOG2234@1,KOG2195@2759
Ec32 ortholog descriptionpoly(L-malate)-hydrolase precursor
Ec32 orthologEc-27_000030.1
EC3.4.17.21
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons3
Model size636
Cds size624
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1140.900.1prot_H-paniculata_contig1140.900.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1140 3974..5999 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928848.150428-CDS-H-paniculata_contig1140:3973..41451622928848.150428-CDS-H-paniculata_contig1140:3973..4145Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1140 3974..4145 -
1691480643.245923-CDS-H-paniculata_contig1140:3973..41451691480643.245923-CDS-H-paniculata_contig1140:3973..4145Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1140 3974..4145 -
1622928848.1932786-CDS-H-paniculata_contig1140:4654..50121622928848.1932786-CDS-H-paniculata_contig1140:4654..5012Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1140 4655..5012 -
1691480643.2615201-CDS-H-paniculata_contig1140:4654..50121691480643.2615201-CDS-H-paniculata_contig1140:4654..5012Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1140 4655..5012 -
1622928848.2112217-CDS-H-paniculata_contig1140:5905..59991622928848.2112217-CDS-H-paniculata_contig1140:5905..5999Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1140 5906..5999 -
1691480643.2720327-CDS-H-paniculata_contig1140:5905..59991691480643.2720327-CDS-H-paniculata_contig1140:5905..5999Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1140 5906..5999 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928848.2249467-UTR-H-paniculata_contig1140:5999..60111622928848.2249467-UTR-H-paniculata_contig1140:5999..6011Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1140 6000..6011 -
1691480643.2801397-UTR-H-paniculata_contig1140:5999..60111691480643.2801397-UTR-H-paniculata_contig1140:5999..6011Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1140 6000..6011 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1140.900.1

>prot_H-paniculata_contig1140.900.1 ID=prot_H-paniculata_contig1140.900.1|Name=mRNA_H-paniculata_contig1140.900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp
MVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVG
VIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAAD
RTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNF
TYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNH
RDAWVFGA
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mRNA from alignment at H-paniculata_contig1140:3974..6011-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1140.900.1 ID=mRNA_H-paniculata_contig1140.900.1|Name=mRNA_H-paniculata_contig1140.900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2038bp|location=Sequence derived from alignment at H-paniculata_contig1140:3974..6011- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTAACCGCGCAGATGGTCTACGCTAACTATGGCCGACCGGAGGATTTCGA TGCGCTGGAGGCTGCAGGCGTATCTGTGGATGGCACCATCGTCATCATCC GATACGGTGAGTGAGGCGAGCGTGTTGAGTTGCGAGACCTGTCTTTGTTT CCCCACTGCTGCAGCTTTGGAGCCATGTTTTTTTTTGTTTCCGTCTCTTG TTTGGAACTGGGCGTTCCTAAATGGTGCCCTTGTATGTATCTATATCTTG ATGTATGTACCTAGTCGAGTATCTATGTCCTCGAATATATATGTACGCAT GTAATGTAGCCCGTGGCCTGTCTTTGCTGCATTGTTTTTCTTGCTCTTTG GACATGTCGCCGCATGGTGTAAGCCTATATTCATAGCTCTGTTTATGCCC CGGGCTTTACCCCTCGCCTCTTGACAACAGATTTTCCTTTAACAGGCAGA ACAACGTTCCTTTTTCATGTTGTGTTGCTCCCCCCCCCCCCCCCCCCCTC CCCCGATACAGTACCTGTCCCTCGTGTTGTCACTCCGCGCTGTCGTTATT TAGCAGGAAGAACCCCACATATGCTGTTCAGTTTACGCTAACTTCTCCGC GCTCTGCGTCTCACGCGGTCACTCCTCCTCTGCAAAGTCTGTTATTTCGT CAGATGTAACCCTTTCCAACGCAGGTTAGGTCGACGGGTTTGGGTTCAGG ATTACGGTGCTGTTGAAGTTAGATATGGTGGGGTGATTACGCCGATCTAC TTAAGTCAGATGTTAGCCCCGTCAACACACACACACACACACACAGACAC AGACAGACACACACACACACACACATACACACACAGAGAGAGAGAGACAC AGACACGCACACCCTGCCAACGCAGTTAGTTCGGTTAGCGTAAGTCCGCT TATCTTGAACAATAACACCCTCTCTGCAACGTACCAACCTCTTTCACGAT TTACCCCCCCCCTCCCCAACTAATCGACGATTTTGATCAATACACATAGG CAAGTGCTTCCGTGGACTTAAAGCAATGAATGCCCAAGCACGCGGAGCGG TCGGCGTCATCATCTATAGCGACCCTCAGCAATGCGGCTCCACCTGGGGG CCTACCTACCCCGATGGCGGGTGGCGGCCTTCCTTCAGCGTGCAGCGCGG CTCGGTTGTGTTCAATTCTCTGTGTATAGGAGACCCGTCCCGGGCCGCGG CGGACCGGACCGTGGAGGAAATATGTGGGTTTTCGCTAGATGAACTGAGG CCGTTGGTCCCCGTCATGCCAATTTCCTACGGCGATGCAGAGCCATTTTT GAGGGGATTGGGAGGTACCGTGGCGCCTGAGGGGTTCCAGGGTGGGTTGA ATTTCACGTGAGTAATACTTTGGGCGGTAGTTTTGAGCGGGGTTGAGGGG AGGGTGGGGCGGGCGGGGAGGCGAGGGGGGTTGATTTCATGTAGTTGCAA AAACAGAAACAGATTCAGTTTCAGGTTGCAGCAAGCTGAGAGCTACATTG GTTACATTGGTTTTCTGGACTGTATGGATCGGGGTACATGTTGTGTGGGC TCAGTGATTTTTGCAGTAGACCAAACGCCCTTTCAAATTGATGTAATCAT ATCATCCTCCATTTGGACAAGTCAATGATATGGAGGGGTTATATTGTACC CCACCTCTAGTCTTGAGCCCTGCTGTTTCATGTTTTTCCTTTTAGCTTCG ACGTGTGTTCTTGAACTAGGGATGCTATGTAAGCTCTTTCCGCGAGCCGG GAATTAATCTGTATCTCCTACCCCCCCCCACCATTTTGTTCGACGACGCT CCCGTCCCCTACCTCACCCCATTCCACCCCACCCCATCCTCCACGTTTTG TCACTGAATGAATCAGTTATACATTGGGGCCAAGCGGACCTTCAAACCTG GTGCGGATGTGCGTGGAAAACGAGGAGCATGTCGGACCCGTGTGGAACGT TATTGGAACGATTCCAGGAACGTTGCCGATCGGACAAGACCGACCGATCA TTCTCGGAAATCATAGGGATGCGTGGGTTTTTGGGGCC
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Coding sequence (CDS) from alignment at H-paniculata_contig1140:3974..6011-

>mRNA_H-paniculata_contig1140.900.1 ID=mRNA_H-paniculata_contig1140.900.1|Name=mRNA_H-paniculata_contig1140.900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at H-paniculata_contig1140:3974..6011- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCTACGCTAACTATGGCCGACCGGAGGATTTCGATGCGCTGGAGGC
TGCAGGCGTATCTGTGGATGGCACCATCGTCATCATCCGATACGATGGTC
TACGCTAACTATGGCCGACCGGAGGATTTCGATGCGCTGGAGGCTGCAGG
CGTATCTGTGGATGGCACCATCGTCATCATCCGATACGGCAAGTGCTTCC
GTGGACTTAAAGCAATGAATGCCCAAGCACGCGGAGCGGTCGGCGTCATC
ATCTATAGCGACCCTCAGCAATGCGGCTCCACCTGGGGGCCTACCTACCC
CGATGGCGGGTGGCGGCCTTCCTTCAGCGTGCAGCGCGGCTCGGTTGTGT
TCAATTCTCTGTGTATAGGAGACCCGTCCCGGGCCGCGGCGGACCGGACC
GTGGAGGAAATATGTGGGTTTTCGCTAGATGAACTGAGGCCGTTGGTCCC
CGTCATGCCAATTTCCTACGGCGATGCAGAGCCATTTTTGAGGGGATTGG
GAGGTACCGTGGCGCCTGAGGGGTTCCAGGGTGGGTTGAATTTCACGCAA
GTGCTTCCGTGGACTTAAAGCAATGAATGCCCAAGCACGCGGAGCGGTCG
GCGTCATCATCTATAGCGACCCTCAGCAATGCGGCTCCACCTGGGGGCCT
ACCTACCCCGATGGCGGGTGGCGGCCTTCCTTCAGCGTGCAGCGCGGCTC
GGTTGTGTTCAATTCTCTGTGTATAGGAGACCCGTCCCGGGCCGCGGCGG
ACCGGACCGTGGAGGAAATATGTGGGTTTTCGCTAGATGAACTGAGGCCG
TTGGTCCCCGTCATGCCAATTTCCTACGGCGATGCAGAGCCATTTTTGAG
GGGATTGGGAGGTACCGTGGCGCCTGAGGGGTTCCAGGGTGGGTTGAATT
TCACTTATACATTGGGGCCAAGCGGACCTTCAAACCTGGTGCGGATGTGC
GTGGAAAACGAGGAGCATGTCGGACCCGTGTGGAACGTTATTGGAACGAT
TCCAGGAACGTTGCCGATCGGACAAGACCGACCGATCATTCTCGGAAATC
ATAGGGATGCGTGGGTTTTTGGGGCCTTATACATTGGGGCCAAGCGGACC
TTCAAACCTGGTGCGGATGTGCGTGGAAAACGAGGAGCATGTCGGACCCG
TGTGGAACGTTATTGGAACGATTCCAGGAACGTTGCCGATCGGACAAGAC
CGACCGATCATTCTCGGAAATCATAGGGATGCGTGGGTTTTTGGGGCC
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