mRNA_H-paniculata_contig1140.900.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A6H5KD01_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD01_9PHAE) HSP 1 Score: 338 bits (867), Expect = 1.030e-108 Identity = 161/212 (75.94%), Postives = 175/212 (82.55%), Query Frame = 1 Query: 1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADRTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636 VTA +VYANYGRPEDF LE GVSVDG IVI+RYG CFRGLKAMNAQ RGAVG IIYSDPQQ G GPTYPDGGWRPS SVQRGS FNSLC GDPSRAA R+VE++CGFS +EL P +PVMPISYGDAEP LR LGG AP FQGGL+FTYT+GPS +V+M VENEEHVGPVWNVIGT+PG LP DRP++LGNHRDAWVFGA Sbjct: 148 VTAPLVYANYGRPEDFRELEGMGVSVDGAIVIVRYGHCFRGLKAMNAQERGAVGTIIYSDPQQDGFKRGPTYPDGGWRPSSSVQRGSCQFNSLCAGDPSRAANPRSVEKVCGFSKEELVPAIPVMPISYGDAEPLLRALGGAAAPGRFQGGLDFTYTVGPSS-GTMVKMVVENEEHVGPVWNVIGTVPGALPEELDRPVVLGNHRDAWVFGA 358
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: R1F4J3_EMIHU (PA domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F4J3_EMIHU) HSP 1 Score: 275 bits (702), Expect = 1.540e-88 Identity = 132/213 (61.97%), Postives = 156/213 (73.24%), Query Frame = 1 Query: 1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADRTV-EEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636 VTA +VYANYG PEDFDAL+A+GVSV+G IV++RYGKCFRGLKA NA+ARGAV +IYSDP + G G YP+G WRP SVQRGS+ F SLC GDPSRA EE+CG++ EL P +PV+P+SY DA P LR LGG AP F+G LN TY LGPS R+ V N GPVWNVI T+ GTLP +D+PI+LGNHRDAWV+GA Sbjct: 155 VTAPVVYANYGFPEDFDALQASGVSVEGAIVLMRYGKCFRGLKARNAEARGAVAALIYSDPAEDGFGQGSVYPEGPWRPPSSVQRGSIQFISLCPGDPSRAYLPAGASEELCGYTQSELIPTIPVLPLSYADAAPLLRSLGGPEAPAPFRGALNLTYRLGPSAGGVRARLAVRNRFEKGPVWNVIATLRGTLPEAEDQPILLGNHRDAWVYGA 367
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A812LK54_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812LK54_9DINO) HSP 1 Score: 272 bits (695), Expect = 7.340e-84 Identity = 132/214 (61.68%), Postives = 156/214 (72.90%), Query Frame = 1 Query: 1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAAD--RTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636 VTA +VYAN+G PEDF AL+AAGV V GTI ++RYGKCFRGLKAMNAQ GA+ IYSDP+Q G G YP G WRP SVQRGS+ F SLC GDP+RA A ++VEE+CG+S +EL P +PV+PISYGDA FL LGG AP F+G LN TY GP+ VRM V+N PVWNV+G IPGTLP D+P++LGNHRDAWV+GA Sbjct: 160 VTAPVVYANFGLPEDFAALKAAGVDVRGTIALMRYGKCFRGLKAMNAQKAGALAAAIYSDPEQDGYAQGSVYPYGPWRPESSVQRGSIQFISLCAGDPTRAYAPHGKSVEELCGYSREELIPQIPVLPISYGDAAIFLDSLGGKEAPASFKGALNITYRTGPTQMQYKVRMQVDNHFQSSPVWNVVGKIPGTLPADLDQPVLLGNHRDAWVYGA 373
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A812TNU8_SYMPI (LAMP1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812TNU8_SYMPI) HSP 1 Score: 265 bits (678), Expect = 2.130e-81 Identity = 130/214 (60.75%), Postives = 151/214 (70.56%), Query Frame = 1 Query: 1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADR--TVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636 VTA +VYAN+G PEDF AL+AAGV V G I ++RYGKCFRGLKAMNAQ GA+ +IYSDP+Q G G YP G WRP SVQRGS+ F SLC GDP+RA A VEE+CG+S EL P +PV+PISYGDA FL LGG AP F+G LN TY GP+ V + V N PVWNVIG IPGTLP D+P++LGNHRDAW+FGA Sbjct: 156 VTAPVVYANFGLPEDFAALKAAGVQVRGAIALMRYGKCFRGLKAMNAQKAGALAAVIYSDPEQDGFAKGSVYPYGPWRPESSVQRGSIQFISLCAGDPTRAYAPHGMDVEELCGYSEKELIPQIPVLPISYGDAAIFLDSLGGPEAPPSFRGALNITYRTGPTETKYKVHLQVANHFQSSPVWNVIGKIPGTLPAELDQPVVLGNHRDAWIFGA 369
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A1Q9F2F1_SYMMI (N-acetylated-alpha-linked acidic dipeptidase 2 n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9F2F1_SYMMI) HSP 1 Score: 272 bits (695), Expect = 5.460e-81 Identity = 132/214 (61.68%), Postives = 156/214 (72.90%), Query Frame = 1 Query: 1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAAD--RTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636 VTA +VYAN+G PEDF AL+AAGV V GTI ++RYGKCFRGLKAMNAQ GA+ IYSDP+Q G G YP G WRP SVQRGS+ F SLC GDP+RA A ++VEE+CG+S +EL P +PV+PISYGDA FL LGG AP F+G LN TY GP+ VRM V+N PVWNV+G IPGTLP D+P++LGNHRDAWV+GA Sbjct: 160 VTAPVVYANFGLPEDFAALKAAGVDVRGTIALMRYGKCFRGLKAMNAQKAGALAAAIYSDPEQDGYAQGSVYPYGPWRPESSVQRGSIQFISLCAGDPTRAYAPHGKSVEELCGYSREELIPQIPVLPISYGDAAIFLDSLGGKEAPASFKGALNITYRTGPTQMQYKVRMQVDNHFQSSPVWNVVGKIPGTLPADLDQPVLLGNHRDAWVYGA 373
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A812JPG4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JPG4_9DINO) HSP 1 Score: 272 bits (695), Expect = 1.100e-80 Identity = 132/214 (61.68%), Postives = 156/214 (72.90%), Query Frame = 1 Query: 1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAAD--RTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636 VTA +VYAN+G PEDF AL+AAGV V GTI ++RYGKCFRGLKAMNAQ GA+ IYSDP+Q G G YP G WRP SVQRGS+ F SLC GDP+RA A ++VEE+CG+S +EL P +PV+PISYGDA FL LGG AP F+G LN TY GP+ VRM V+N PVWNV+G IPGTLP D+P++LGNHRDAWV+GA Sbjct: 160 VTAPVVYANFGLPEDFAALKAAGVDVRGTIALMRYGKCFRGLKAMNAQKAGALAAAIYSDPEQDGYAQGSVYPYGPWRPESSVQRGSIQFISLCAGDPTRAYAPHGKSVEELCGYSREELIPQIPVLPISYGDAAIFLDSLGGKEAPASFKGALNITYRTGPTQMQYKVRMQVDNHFQSSPVWNVVGKIPGTLPADLDQPVLLGNHRDAWVYGA 373
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A2R5G5K5_9STRA (Transferrin receptor protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5K5_9STRA) HSP 1 Score: 256 bits (653), Expect = 2.960e-78 Identity = 125/210 (59.52%), Postives = 146/210 (69.52%), Query Frame = 1 Query: 10 QMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADRTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPS-GPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636 +MVYANYGRPEDF+ LE G+ V G IV++RYG+CFRGLK MNAQA A V+I+SDP+ G G YPDG WRP+ SVQRGS FNSLC GDP+RAA+ + CG DEL P +P +PISY D P L LGG AP GFQGGLN TY LGPS G V V N V P+WNVI IPG+L +D+PI++GNHRDAWVFGA Sbjct: 122 EMVYANYGRPEDFEELEKRGIHVAGKIVLVRYGQCFRGLKIMNAQAFNASAVLIFSDPEDDGFGKGKVYPDGPWRPASSVQRGSAQFNSLCAGDPARAASGFDSKSRCGLERDELIPSIPAIPISYEDVTPLLERLGGPEAPHGFQGGLNLTYRLGPSSGWEATVE--VNNTREVKPIWNVIAEIPGSLEADEDQPIVIGNHRDAWVFGA 329
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A7S0Y2P3_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y2P3_HEMAN) HSP 1 Score: 253 bits (647), Expect = 4.320e-78 Identity = 122/213 (57.28%), Postives = 153/213 (71.83%), Query Frame = 1 Query: 1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADRTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGT-LPIGQDRPIILGNHRDAWVFGA 636 VTA++VYANYGRP+DF+ALE GV+V G +V++RYG+CFRGLK MNA+ RGA VIIYSDP G T G YPDG WRP VQRGS F SLC GD +R + + ++CG++ ++L P +PV+P+S+GDAEP LR LGG AP GFQGGL+F Y LGP GPS +VR+ VE+ +WNV +PG DR ++LGNHRDAWVFGA Sbjct: 151 VTAEVVYANYGRPDDFEALEGLGVTVKGKVVMVRYGRCFRGLKVMNAERRGAAAVIIYSDPADDGFTQGKVYPDGPWRPRTGVQRGSAQFASLCAGDVARIYSKASALDLCGYATEDLVPKIPVLPMSWGDAEPILRRLGGADAPGGFQGGLDFPYKLGP-GPS-VVRVMVESTMKARAIWNVCAVVPGKHYGTEDDRMVLLGNHRDAWVFGA 361
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: W7TMG7_9STRA (Glutamate carboxypeptidase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMG7_9STRA) HSP 1 Score: 255 bits (652), Expect = 2.370e-77 Identity = 128/222 (57.66%), Postives = 158/222 (71.17%), Query Frame = 1 Query: 1 VTAQMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADR---TVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGT-----VAPEGFQGGLNFTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQ--DRPIILGNHRDAWVFGA 636 V A +VYAN+GRPEDF+ L AGV V+G+IV++RYG+CFRGLK MNA+ RGAVG +IYSDP+Q G GPTYP+G WRP+F VQRGSV F SLC GDP R A + E++CG++ ++L+P +PV+PISYGDA PFL+ L VAP FQG LN TY LGPS + V M N E VG VWNVIG + +L G+ DR ++LGNHRDAWV GA Sbjct: 169 VKAPLVYANFGRPEDFEVLAEAGVIVEGSIVLMRYGECFRGLKVMNAEKRGAVGALIYSDPEQDGYALGPTYPEGPWRPAFGVQRGSVQFLSLCAGDPGRTALAEDGGSAEDVCGYATEDLKPKIPVLPISYGDATPFLQSLANAGAESPVAPASFQGALNLTYHLGPS--RDRVVMATHNREVVGTVWNVIGVVE-SLHYGRARDRVVVLGNHRDAWVDGA 387
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Match: A0A7S3LRD1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRD1_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.960e-74 Identity = 117/211 (55.45%), Postives = 144/211 (68.25%), Query Frame = 1 Query: 10 QMVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGVIIYSDPQQCGSTWGPTYPDGGWRPSFSVQRGSVVFNSLCIGDPSRAAADRTVEEICGFSLDELRPLVPVMPISYGDAEPFLRGLGGTVAPEGFQGGLN--FTYTLGPSGPSNLVRMCVENEEHVGPVWNVIGTIPGTLPIGQDRPIILGNHRDAWVFGA 636 ++VYANYG+PEDFD LE+ G+ V G +VI+RYGKCFRGLK MNAQ RGA+G+++YSDP G G YPDG WRP SVQRGS FNSLC GDP RA ++ T E++CG+ +E+ P +P +PISY DA P L L G P + GGL Y GPS V + N V P+WNVI TI GTLP D+P++LGNHRDAWV+GA Sbjct: 82 KLVYANYGKPEDFDVLESEGIDVMGKVVIVRYGKCFRGLKIMNAQRRGAIGLLLYSDPLDDGYRVGKVYPDGPWRPETSVQRGSAQFNSLCPGDPQRAHSEATTEQLCGYKPNEVIPSIPAIPISYHDAIPLLLSLQGDEVPPDWVGGLTDKLVYRFGPS--KGTVSLGTNNTFKVTPIWNVITTIKGTLPKELDQPVVLGNHRDAWVYGA 290 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1140.900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1140.900.1 >prot_H-paniculata_contig1140.900.1 ID=prot_H-paniculata_contig1140.900.1|Name=mRNA_H-paniculata_contig1140.900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp MVYANYGRPEDFDALEAAGVSVDGTIVIIRYGKCFRGLKAMNAQARGAVGback to top mRNA from alignment at H-paniculata_contig1140:3974..6011- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1140.900.1 ID=mRNA_H-paniculata_contig1140.900.1|Name=mRNA_H-paniculata_contig1140.900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2038bp|location=Sequence derived from alignment at H-paniculata_contig1140:3974..6011- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1140:3974..6011- >mRNA_H-paniculata_contig1140.900.1 ID=mRNA_H-paniculata_contig1140.900.1|Name=mRNA_H-paniculata_contig1140.900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at H-paniculata_contig1140:3974..6011- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |