mRNA_H-paniculata_contig11359.873.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11359.873.1
Unique NamemRNA_H-paniculata_contig11359.873.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11359.873.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.190e-88
Identity = 146/312 (46.79%), Postives = 204/312 (65.38%), Query Frame = 1
Query:    1 PEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETGVNPQGFKSKKVIANKGQKTTGIKRSNSRENVPVVATVSAAGVTMPPVIIFKGERVQLAWVME-PGPEGSLFRATESSMMQGPLYLRFIKKFHKFTVNIDPVDSKPHVLVLDG*KSHVTIDVLRYAMAHNIMLFQLPSHSFRITQLLDIWAFGIFKCTITDILGNWAREHGLKMAVKHVMAGVIKRAWQESFTVANIAASFAGSGIYPVDIMRGINRLIGRGTKQKERPFDRPPLADLPMLVTD 933
            P+KGPGR W  GF+ RH R+SLR +  +E+NRVT+ + +RL +FY  W Q+ DE +P ADH+WNTDE+G   QG + ++V+A +GQ      RS SREN  +V T++AAG  + P IIFKG+R    WV +  GP G+ +  TESS M G +++++IK FHK   + + +D KPHVLVLDG  SHVT+DV++ A++ NI L QLPSH   ITQ LD+  FG FK  +  ++  +   +G  +  K  MAG+I  AW  SFT     ASFAG+G++PVD  R ++RL+    K+K    DRPPL D+P+ VT+
Sbjct:  118 PDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESGGTVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFNGDWVADLNGPPGAYYDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWPVDRERALSRLLR--PKRKVTETDRPPLEDVPIAVTN 427          
BLAST of mRNA_H-paniculata_contig11359.873.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 2.930e-86
Identity = 142/309 (45.95%), Postives = 200/309 (64.72%), Query Frame = 1
Query:   10 GPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETGVNPQGFKSKKVIANKGQKTTGIKRSNSRENVPVVATVSAAGVTMPPVIIFKGERVQLAWVM-EPGPEGSLFRATESSMMQGPLYLRFIKKFHKFTVNIDPVDSKPHVLVLDG*KSHVTIDVLRYAMAHNIMLFQLPSHSFRITQLLDIWAFGIFKCTITDILGNWAREHGLKMAVKHVMAGVIKRAWQESFTVANIAASFAGSGIYPVDIMRGINRLIGRGTKQKERPFDRPPLADLPMLVTD 933
            GPGR W  GF +RHP LS R +  +EANR+ +DD+ RL+ FY  + ++ D++K  ADH+WNTDETG   QG K+ KVI   GQK  G  RSNSRENV VV T+SAAG T+ P II+KG+R+Q  WV    GP  +     +SS MQG +++ +I+ FH+  ++   ++  PHVLVLDG  SHVT +V++ A   NI+L+Q+PSHS  + Q LD+ +FG FK  IT +L  +   +G ++  K  M G++  AW  SF+     +SFAG+G++PVD  R + RL G G K+KER   RPP+ D+   ++D
Sbjct:  107 GPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKVITESGQKVGGAMRSNSRENVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVIDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEERNTSSFAGAGLWPVDGERAMGRLQGVG-KRKERSGARPPVEDITGAISD 414          
BLAST of mRNA_H-paniculata_contig11359.873.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 3.230e-85
Identity = 142/310 (45.81%), Postives = 199/310 (64.19%), Query Frame = 1
Query:    1 PEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETGVNPQGFKSKKVIANKGQKTTGIKRSNSRENVPVVATVSAAGVTMPPVIIFKGERVQLAWVMEP-GPEGSLFRATESSMMQGPLYLRFIKKFHKFTVNIDPVDSKPHVLVLDG*KSHVTIDVLRYAMAHNIMLFQLPSHSFRITQLLDIWAFGIFKCTITDILGNWAREHGLKMAVKHVMAGVIKRAWQESFTVANIAASFAGSGIYPVDIMRGINRLIGRGTKQKERPFDRPPLADLPMLV 927
            PEKGPG++W  GF+ RHPR+  R +  +EANRVT + + R+ EFY  W    ++ KP ADH+ NTDETG  PQG K+ K     GQK     R+NSREN  +V T+SA G T  P IIFKG+R+Q  W  E  GP  + +  T+SS MQG ++++++K FH+       +D KPH+L+LDG  SHV+++V++ AM  NI+LFQLPSH+  ITQ LD+ AFG FK  +T +L ++ R  G  +  K  + GVI  AW  +FT     +SFAG+G++PV++ R ++RL G   K+ E    RPPL D+P+ V
Sbjct:  102 PEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTA-KRNENQTGRPPLKDVPIAV 410          
BLAST of mRNA_H-paniculata_contig11359.873.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 6.570e-85
Identity = 142/306 (46.41%), Postives = 196/306 (64.05%), Query Frame = 1
Query:   16 GREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETGVNPQGFKSKKVIANKGQKTTGIKRSNSRENVPVVATVSAAGVTMPPVIIFKGERVQLAWVMEP-GPEGSLFRATESSMMQGPLYLRFIKKFHKFTVNIDPVDSKPHVLVLDG*KSHVTIDVLRYAMAHNIMLFQLPSHSFRITQLLDIWAFGIFKCTITDILGNWAREHGLKMAVKHVMAGVIKRAWQESFTVANIAASFAGSGIYPVDIMRGINRLIGRGTKQKERPFDRPPLADLPMLVT 930
            G++W  GF++RHPR+S R +  +E+NR+T D++  + E Y       DE KP ADH+ NTDETG  PQG K+ K  A  GQK     RSNS EN  VV T+SA G T  P IIFKG+R+Q  W  E  GP+ + +  T+SS MQG ++++++K FHK   +   +D KPH LVLDG  SHV+ +V++ AM  NI+LFQLPSH+  ITQ LD+ AFG FK  +T +L ++   +G  + +K  + GVI  AWQ S T+    ASF G+G+ PVD+ R + RL G   K++E P  RPPL D+P+ +T
Sbjct:  103 GKDWLAGFLKRHPRVSERTTRIYESNRITEDNEPCIVELYKKLAAILDEHKPKADHVHNTDETGPTPQGTKTMKAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQRSLTLERNNASFGGAGLRPVDMDRALTRLQGTA-KREEGPTGRPPLEDVPIAMT 407          
BLAST of mRNA_H-paniculata_contig11359.873.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 2.490e-84
Identity = 142/309 (45.95%), Postives = 201/309 (65.05%), Query Frame = 1
Query:   10 GPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETGVNPQGFKSKKVIANKGQKTTGIKRSNSRENVPVVATVSAAGVTMPPVIIFKGERVQLAWVM-EPGPEGSLFRATESSMMQGPLYLRFIKKFHKFTVNIDPVDSKPHVLVLDG*KSHVTIDVLRYAMAHNIMLFQLPSHSFRITQLLDIWAFGIFKCTITDILGNWAREHGLKMAVKHVMAGVIKRAWQESFTVANIAASFAGSGIYPVDIMRGINRLIGRGTKQKERPFDRPPLADLPMLVTD 933
            GPGR W  GF +RHP LS R +  +EANR+ +DD+ RL+ FY  + ++ D++K  ADH+WNTDETG   QG K+ K IA  GQK  G  RSNSRE V VV T+SAAG T+ P II+KG+R+Q  WV    GP  +    T+SS MQG +++ +I+ FH+  ++   ++  PHVLVLDG  SHVT +V++ A   NI+L+Q+PSHS  + Q LD+ +FG FK  IT +L  +   +G ++  K  M G++  AW  SF+     +SFAG+G++PVD  R + RL G G K+KER   RPP+ D+ + ++D
Sbjct:  107 GPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKAIAESGQKVVGAMRSNSRETVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVTDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEQQNISSFAGAGLWPVDGERAMGRLQGVG-KRKERSGARPPVEDITVAISD 414          
BLAST of mRNA_H-paniculata_contig11359.873.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 3.050e-83
Identity = 142/310 (45.81%), Postives = 199/310 (64.19%), Query Frame = 1
Query:    1 PEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETGVNPQGFKSKKVIANKGQKTTGIKRSNSRENVPVVATVSAAGVTMPPVIIFKGERVQLAWVMEP-GPEGSLFRATESSMMQGPLYLRFIKKFHKFTVNIDPVDSKPHVLVLDG*KSHVTIDVLRYAMAHNIMLFQLPSHSFRITQLLDIWAFGIFKCTITDILGNWAREHGLKMAVKHVMAGVIKRAWQESFTVANIAASFAGSGIYPVDIMRGINRLIGRGTKQKERPFDRPPLADLPMLV 927
            PEKGPG++W  GF+ RHPR+  R +  +EANRVT + + R+ EFY  W    ++ KP ADH+ NTDETG  PQG K+ K     GQK     R+NSREN  +V T+SA G T  P IIFKG+R+Q  W  E  GP  + +  T+SS MQG ++++++K FH+       +D KPH+L+LDG  SHV+++V++ AM  NI+LFQLPSH+  ITQ LD+ AFG FK  +T +L ++ R  G  +  K  + GVI  AW  +FT     +SFAG+G++PV++ R ++RL G   K+ E    RPPL D+P+ V
Sbjct:  343 PEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTA-KRNENQTGRPPLKDVPIAV 651          
BLAST of mRNA_H-paniculata_contig11359.873.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 8.580e-81
Identity = 146/325 (44.92%), Postives = 202/325 (62.15%), Query Frame = 1
Query:    1 PEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETGVNPQGFKSKKVIANKGQ---------------KTTGIKRSNSRENVPVVATVSAAGVTMPPVIIFKGERVQLAWVMEP-GPEGSLFRATESSMMQGPLYLRFIKKFHKFTVNIDPVDSKPHVLVLDG*KSHVTIDVLRYAMAHNIMLFQLPSHSFRITQLLDIWAFGIFKCTITDILGNWAREHGLKMAVKHVMAGVIKRAWQESFTVANIAASFAGSGIYPVDIMRGINRLIGRGTKQKERPFDRPPLADLPMLV 927
            PEKGPG++W  GF+RRH R++ R +   EAN +T D++ R+ +FY  W    DE KP A+H+ NTDET   P+  + K   A +G                K  G  RSNSREN  VVAT+SA G T  P IIFKG+R+Q  W +E  G EG+ +  T+ S MQG L++ ++K FHK   +   +D KPH+L+LDG  SHV+++V++ AM   I+LFQLPSH+  ITQ LD+ AFG FK ++T +L ++ R  G  + +K  M GVI  AW+ SFT     +SFAG+G++PV+  R + RL G  TK KER  +RPPL D+P+  
Sbjct:  103 PEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERWAALLDEVKPEANHVHNTDETEP-PRXHRRKGPEAAEGARAHRHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGLEGAKYTCTDYSFMQGDLFIAYLKDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTATK-KERRDERPPLQDVPIAA 425          
BLAST of mRNA_H-paniculata_contig11359.873.1 vs. uniprot
Match: A0A6H5KHG4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG4_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 1.780e-79
Identity = 130/278 (46.76%), Postives = 181/278 (65.11%), Query Frame = 1
Query:    1 PEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETGVNPQGFKSKKVIANKGQKTTGIKRSNSRENVPVVATVSAAGVTMPPVIIFKGERVQLAWVMEP-GPEGSLFRATESSMMQGPLYLRFIKKFHKFTVNIDPVDSKPHVLVLDG*KSHVTIDVLRYAMAHNIMLFQLPSHSFRITQLLDIWAFGIFKCTITDILGNWAREHGLKMAVKHVMAGVIKRAWQESFTVANIAASFAGSGIYPVD 831
            P K PG++W  GF++RHPR+S R +  +E+NR+T D + R  E+Y  W   +DE KP ADH+ NTDETG  PQG K+ K  A  GQK     RSNSREN  VV T+S  GVT  P IIFKG+R+QL W  E  GP+ + +  T+SS MQG ++++++K F+K   +   +D KPH+LVL G  S V+ +V++ AM  NI+LFQLPSH+  ITQ LD+ AFG FK  +T +L ++   +G  + +K  +  VI  AWQ SFT     ASF G+G++P++
Sbjct:   41 PGKRPGKDWLAGFLKRHPRVSERTTRIYESNRITEDKEPRNVEYYKKWAALFDEHKPEADHVHNTDETGTTPQGTKTMKAFAEVGQKVVESMRSNSRENATVVTTISTNGVTWAPTIIFKGQRLQLDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFYKQLDDRGVLDGKPHILVLGGHASLVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGSLPLKRDVPSVIAAAWQRSFTPERNKASFGGAGLWPLE 318          
BLAST of mRNA_H-paniculata_contig11359.873.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 9.620e-75
Identity = 136/310 (43.87%), Postives = 184/310 (59.35%), Query Frame = 1
Query:    1 PEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETGVNPQGFKSKKVIANKGQKTTGIKRSNSRENVPVVATVSAAGVTMPPVIIFKGERVQL-AWVMEPGPEGSLFRATESSMMQGPLYLRFIKKFHKFTVNIDPVDSKPHVLVLDG*KSHVTIDVLRYAMAHNIMLFQLPSHSFRITQLLDIWAFGIFKCTITDILGNWAREHGLKMAVKHVMAGVIKRAWQESFTVANIAASFAGSGIYPVDIMRGINRLIGRGTKQKERPFDRPPLADLPMLV 927
            PEKGPG++W  GF RRHPR++ R +  +EANR+T D++ R+ +FY  W    DE KP A+H+ NTDETG  PQG K+ K  A  GQK  G  R+NSREN  VVAT+SA G T  P IIFKG+R+Q   +V   GPEG+    T+SS MQG +++ ++K FHK   +   +D KPH+L+LDG  SHV+++V++ AM   I+LFQLPSH+  ITQ LD+ AFG FK +I   L                                     FAG+ ++PV+  R + RL G   K+KER  +R PL D+P+  
Sbjct:  103 PEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFKGQRLQADCFVERNGPEGARHTCTDSSFMQGDVFMNYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSINKSL-------------------------------------FAGASLWPVNKERALGRLKGTA-KKKERRDERTPLQDIPIAA 374          
BLAST of mRNA_H-paniculata_contig11359.873.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 5.020e-74
Identity = 118/239 (49.37%), Postives = 164/239 (68.62%), Query Frame = 1
Query:    1 PEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETGVNPQGFKSKKVIANKGQKTTGIKRSNSRENVPVVATVSAAGVTMPPVIIFKGERVQLAWVMEP-GPEGSLFRATESSMMQGPLYLRFIKKFHKFTVNIDPVDSKPHVLVLDG*KSHVTIDVLRYAMAHNIMLFQLPSHSFRITQLLDIWAFGIFKCTITDILGNWAREHG 714
            PEKGPG++W  GF+RRHPR++ R +  +EANR+T D++ R+ +FY  W   +DE KP A+H+ NTDETG  PQG K+ K  A  GQK  G  RSNSREN+ VVAT+SA G T  P I FK +R+Q+ W +E  GPEG+ +  T+SS MQG +++ ++K FHK   +   +D KPH+L+ DG  SHV+++V+R AM   I+LFQLPSH+  ITQ LD+ AFG FK ++  +L ++    G
Sbjct:  103 PEKGPGKDWLGGFLRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALHDEVKPKANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRSNSRENITVVATISADGHTWAPTITFKRQRLQVDWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLHDGHASHVSVEVIRLAMNLKIVLFQLPSHTSHITQPLDVVAFGRFKKSVPSVLASFYHISG 341          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11359.873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYX7_9PHAE1.190e-8846.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5E2_9PHAE2.930e-8645.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV04_9PHAE3.230e-8545.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBS6_9PHAE6.570e-8546.41DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
B2KWI5_ECTSI2.490e-8445.95Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5JJ12_9PHAE3.050e-8345.81Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRA3_9PHAE8.580e-8144.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHG4_9PHAE1.780e-7946.76DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JFM5_9PHAE9.620e-7543.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ62_9PHAE5.020e-7449.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11359contigH-paniculata_contig11359:6075..7323 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score85.5
Seed ortholog evalue1.8e-14
Seed eggNOG ortholog2880.D8LN28
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DDE superfamily endonuclease
EggNOG OGs2CZS4@1,2SBGG@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size933
Cds size354
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11359.873.1prot_H-paniculata_contig11359.873.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11359 6970..7323 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928843.4345176-UTR-H-paniculata_contig11359:6074..62791622928843.4345176-UTR-H-paniculata_contig11359:6074..6279Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11359 6075..6279 +
1691480641.6357667-UTR-H-paniculata_contig11359:6074..62791691480641.6357667-UTR-H-paniculata_contig11359:6074..6279Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11359 6075..6279 +
1622928843.4487247-UTR-H-paniculata_contig11359:6595..69691622928843.4487247-UTR-H-paniculata_contig11359:6595..6969Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11359 6596..6969 +
1691480641.6510055-UTR-H-paniculata_contig11359:6595..69691691480641.6510055-UTR-H-paniculata_contig11359:6595..6969Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11359 6596..6969 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928843.465909-CDS-H-paniculata_contig11359:6969..73231622928843.465909-CDS-H-paniculata_contig11359:6969..7323Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11359 6970..7323 +
1691480641.6667562-CDS-H-paniculata_contig11359:6969..73231691480641.6667562-CDS-H-paniculata_contig11359:6969..7323Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11359 6970..7323 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11359.873.1

>prot_H-paniculata_contig11359.873.1 ID=prot_H-paniculata_contig11359.873.1|Name=mRNA_H-paniculata_contig11359.873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp
MAHNIMLFQLPSHSFRITQLLDIWAFGIFKCTITDILGNWAREHGLKMAV
KHVMAGVIKRAWQESFTVANIAASFAGSGIYPVDIMRGINRLIGRGTKQK
ERPFDRPPLADLPMLVTD
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mRNA from alignment at H-paniculata_contig11359:6075..7323+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11359.873.1 ID=mRNA_H-paniculata_contig11359.873.1|Name=mRNA_H-paniculata_contig11359.873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1249bp|location=Sequence derived from alignment at H-paniculata_contig11359:6075..7323+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCGAGAAGGGACCCGGCAGAGAGTGGTTTGTGGGCTTCATACGTAGACA CCCTCGGCTTTCACTGCGGAGAAGCTGCAATCACGAGGCCAACCGAGTCA CCGCAGACGACAAGGACCGACTCGAAGAGTTCTATGGCTCTTGGAAGCAA TACTACGACGAGCAGAAACCTGTAGCTGATCACATATGGAACACGGACGA GACAGGTGATAGAGCTACATGCACTGTTAATACTGTACATATACTACATA ACCTGTTGTACTGCTGTGCTATACCGGTACGATAGTCATGTCCGTGCTCG ATTCAGCGTAAGTGAAGTCACTTCACTTCCTCTGGTGCACCTGCGCGTGG CTCTTGGACAAAGACATCCTACCGTATGCACTGTTGTATTGCTGTTATGC TGCGGCTCGGAGTATAGAGCTCTACAGCCCTACTGTTGGAGTGTACTGTT GTACGAGCACTGCTGTTTGGGATGGTTGCGCTCTTTTACCGTGTTGCTGT GGGTATCGTATCTTGTCGCAGGTGTCAATCCGCAAGGGTTCAAGTCCAAG AAGGTGATTGCCAATAAGGGGCAGAAGACCACCGGTATCAAGCGCTCGAA TTCGCGAGAAAACGTCCCGGTTGTCGCGACGGTGAGCGCAGCAGGGGTCA CGATGCCGCCGGTTATAATATTCAAGGGGGAGCGGGTCCAACTGGCGTGG GTCATGGAACCAGGTCCCGAAGGTTCCCTGTTTCGCGCCACAGAATCCTC CATGATGCAAGGGCCGCTATATCTTCGCTTCATCAAGAAGTTTCACAAGT TCACTGTGAATATCGATCCCGTCGATAGCAAGCCTCACGTCCTCGTTCTT GACGGGTAGAAGTCGCACGTGACTATCGACGTGCTGAGGTATGCAATGGC GCACAATATCATGCTCTTTCAGTTGCCGTCACACTCGTTCCGCATCACCC AACTGTTGGATATTTGGGCATTCGGTATCTTCAAGTGCACAATCACTGAT ATCCTTGGGAATTGGGCGAGGGAACACGGCCTAAAGATGGCGGTGAAGCA CGTCATGGCCGGTGTAATCAAGAGAGCTTGGCAGGAGAGCTTTACCGTTG CGAACATCGCAGCGTCATTTGCGGGGTCCGGGATCTACCCTGTTGACATC ATGCGTGGTATCAACCGGCTTATCGGCCGAGGAACCAAGCAGAAGGAGAG ACCGTTCGATCGCCCCCCTTTGGCGGATCTTCCGATGCTTGTCACCGAC
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Coding sequence (CDS) from alignment at H-paniculata_contig11359:6075..7323+

>mRNA_H-paniculata_contig11359.873.1 ID=mRNA_H-paniculata_contig11359.873.1|Name=mRNA_H-paniculata_contig11359.873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=708bp|location=Sequence derived from alignment at H-paniculata_contig11359:6075..7323+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGCACAATATCATGCTCTTTCAGTTGCCGTCACACTCGTTCCGCAT
CACCCAACTGTTGGATATTTGGGCATTCGGTATCTTCAAGTGCACAATCA
CTGATATCCTTGGGAATTGGGCGAGGGAACACGGCCTAAAGATGGCGGTG
AAGCACGTCATGGCCGGTGTAATCAAGAGAGCTTGGCAGGAGAGCTTTAC
CGTTGCGAACATCGCAGCGTCATTTGCGGGGTCCGGGATCTACCCTGTTG
ACATCATGCGTGGTATCAACCGGCTTATCGGCCGAGGAACCAAGCAGAAG
GAGAGACCGTTCGATCGCCCCCCTTTGGCGGATCTTCCGATGCTTGTCAC
CGACATGGCGCACAATATCATGCTCTTTCAGTTGCCGTCACACTCGTTCC
GCATCACCCAACTGTTGGATATTTGGGCATTCGGTATCTTCAAGTGCACA
ATCACTGATATCCTTGGGAATTGGGCGAGGGAACACGGCCTAAAGATGGC
GGTGAAGCACGTCATGGCCGGTGTAATCAAGAGAGCTTGGCAGGAGAGCT
TTACCGTTGCGAACATCGCAGCGTCATTTGCGGGGTCCGGGATCTACCCT
GTTGACATCATGCGTGGTATCAACCGGCTTATCGGCCGAGGAACCAAGCA
GAAGGAGAGACCGTTCGATCGCCCCCCTTTGGCGGATCTTCCGATGCTTG
TCACCGAC
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