mRNA_H-paniculata_contig11349.870.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11349.870.1 vs. uniprot
Match: D8LB63_ECTSI (Putative adhesion lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB63_ECTSI) HSP 1 Score: 271 bits (694), Expect = 1.570e-81 Identity = 144/275 (52.36%), Postives = 190/275 (69.09%), Query Frame = 1 Query: 4 SEFYGQLDTVITALTTAM-MDGNLSDPKGSFTVFIPTDKAFLKAGLGPGSMAALPQEIVENLLLYHTLHGAIVEADIEKDATLFTALNIDLRTQGAVLVDSLGERSNIVEADVACSNGYLHVVDGVLMPPDLMTSLSTYNAKGGPYEGVFDVLQTSLDLTNMSRELSGLKGPYTLLAPTDDAFASLGLNTSTITGANRTALELVLRYHIVEGLVDAENIETASPLTTIAA--TQMTVSGEGVLGDSQGRSADILATDLVSSNGIMHAISSVMLPF 819 S ++GQ DT+I AL + +D LS P G FT+F PT+ AFL AG+GP ++ +P I+ENLLLYHTL G ++ + I D +LFTAL +DL T GA L+DS G I EADV CSNGYLH VDGVLMPPDLM+SL TYN GG YEGVFD T+++LT++S + GL GPYT+LAPTD AF L L+ S I ANRTALE +LRYH+V+G V +++ L T++ + V G ++ D++G A IL +L SSNG++HAI +V++PF Sbjct: 520 SPYFGQFDTMIAALAASSGLDMELSAP-GPFTLFAPTNAAFLHAGIGPENVEDIPPSILENLLLYHTLDGGVMRSAIASDDSLFTALGVDLATSGATLIDSEGNAIAITEADVKCSNGYLHYVDGVLMPPDLMSSLETYNEPGGSYEGVFDTFLTAINLTDVSGDYKGLNGPYTVLAPTDSAFLELRLDPSNINLANRTALEELLRYHMVDGEVGTNSMDDVGMLRTLSGGGSLSVVGGGTLIEDAEGGDASILVGNLPSSNGMVHAIDAVLMPF 793
BLAST of mRNA_H-paniculata_contig11349.870.1 vs. uniprot
Match: A0A7Y1TSC2_9ACTN (Fasciclin domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y1TSC2_9ACTN) HSP 1 Score: 139 bits (351), Expect = 9.630e-36 Identity = 97/281 (34.52%), Postives = 152/281 (54.09%), Query Frame = 1 Query: 16 GQLDTVITALTTAMMDGNLSDPKGSFTVFIPTDKAFLKAGLGPGSMAAL--PQEIVENLLLYHTLHGAIVEADIEKDATLFTALNIDLRTQGAVLVDSLGERSNIVEADVACSNGYLHVVDGVLMPP-----DLMTSLSTYNAKGGPYE-----GVFDVLQTSLDLTNMSRELSGLKGPYTLLAPTDDAFASLGLNTSTITGANRTALELVLRYHIVEGLVDAENIETASPLTTIAATQMTVS--GEGVLGDSQGRSADILATDLVSSNGIMHAISSVMLP 816 G DT++TA+T A + LS +G FTVF PTD AF A L G++ L + + +LLYH + G + AD+ AT T D+ V+ + SN+++ D+ SNG +HV+D VL+PP D M A G + G F+ L ++ + L+G GP+T+ APTD+AFA+L T + AL +L YH+V G V A ++ TT+ + +T++ GE V+ D+ A+++ATD+++SNG++H I +V+LP Sbjct: 60 GSFDTLVTAVTAAGLADTLSG-EGPFTVFAPTDDAF--AALPEGALEGLLADTDALTEVLLYHVVSGDVRAADVVNLATATTLAGADITID--VMDGVMLNASNVIQTDIVASNGVIHVIDAVLLPPGFGEEDAMDDDMGDEAVGTIVDVAVGAGTFETLVAAVQAAGLVDTLTG-DGPFTVFAPTDEAFAALPEGTVAALLEDIPALTDILLYHVVAGEVKAADVVGLDSATTVQGSDITITIDGETVMVDA----ANVIATDVMASNGVIHVIDAVILP 330
BLAST of mRNA_H-paniculata_contig11349.870.1 vs. uniprot
Match: UPI0019A1EFFD (Fasciclin domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=UPI0019A1EFFD) HSP 1 Score: 136 bits (343), Expect = 9.900e-35 Identity = 99/276 (35.87%), Postives = 143/276 (51.81%), Query Frame = 1 Query: 22 LDTVITALTTAMMDGNLSDPKGSFTVFIPTDKAF--LKAGLGPGSMAALPQE-IVENLLLYHTLHGAIVEADIEKDATLFTA----LNIDLRTQGA-VLVDSLGERSNIVEADVACSNGYLHVVDGVLMPPDLMTSLSTYNAKGGPYEGVFDVLQTSLDLTNMSRELSGLKGPYTLLAPTDDAFASLGLN---TSTITGANRTALELVLRYHIVEGLVDAENIETASPLTTIAATQMTVSGEGVLGDSQGRSADILATDLVSSNGIMHAISSVMLP 816 L ++ A+ A + LS G +TVF PTD AF L A LG L ++ +L YH L + A + + T ID GA V+ D R+NI + DVA SNG +HV+D VL+P + + T A F VL ++ N+ L G GP+T+ APTD AFA+L T T AN L VL YH+V G V A N+ +P+TT+ +V+ V+ D +GR+A+I+ATD+++SNG++H + V+LP Sbjct: 47 LSILVEAVVAADLATTLSGA-GPYTVFAPTDAAFASLLAELGVTKAQLLANRPLLTQVLTYHVLPARVPAAAVPAGQAITTVEGGIFKIDAAAGGALVITDGRNRRANITQTDVAASNGVIHVIDKVLLPAN-RNIVQTAQASAD-----FTVLVEAVVAANLVPTLQGA-GPFTVFAPTDAAFAALLAELGVTKTALLANTALLTKVLTYHVVPGRVLAANVPVGAPITTVQGETFSVNASLVITDRRGRTANIVATDVLASNGVIHVVDRVILP 314
BLAST of mRNA_H-paniculata_contig11349.870.1 vs. uniprot
Match: A0A1E7EP57_9STRA (Beta-Ig-H3/fasciclin (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EP57_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.370e-33 Identity = 99/296 (33.45%), Postives = 151/296 (51.01%), Query Frame = 1 Query: 28 TVITALTTAMMDGNLSDPKGSFTVFIPTDKAFLKAGLGPGSMAALPQEIVE------------NLLLYHTLHGAIVEADIEKDATLFTALN-----IDLRTQGAVLVDSLGERSNIVEADVACSNGYLHVVDGVLMPPD------LMTSLSTYNAKGGPYE-GVFDVLQTSLDLTNMSRELSGLKGPYTLLAPTDDAFASLG--LNTSTITGANRTALELVLRYHIVEGLVDAENIETASPLTTIAATQMTVSGEGVLGD-SQG---RSADILATDLVSSNGIMHAISSVMLPFSL 825 T++ AL A + LS+P G +TVF PTD AF AALP+E+V N+LLYH + G ++ D+ T L +DL T G + DS ++EADV SNG +HVVD VL+PP L TS ++ + G+F+ L +L ++ LS GPYT+ APTDDAFA+L L + G N+ AL +L YH+V+G V + ++ T+ + GE V D + G + ++ D+++SNG++H + +V++P S+ Sbjct: 1 TLVAALGAADLVDALSEPNGPYTVFAPTDDAF----------AALPEELVPCLLRSKNKGALTNILLYHVVDGQVLSTDLSNGLEAPTLLEGEDVTVDL-TDGVKINDS-----TVIEADVRTSNGVIHVVDAVLVPPSIDVAAFLETSCGAFDIPETAVDAGIFNTLVAALGAADLVDALSEPNGPYTVFAPTDDAFAALPEELVPCLLKGKNKPALTNILLYHVVDGQVLSTDLSNGLEAPTL------LEGEDVTVDLTDGVKINDSTVIKADVLTSNGVIHVVDAVLVPPSI 274
BLAST of mRNA_H-paniculata_contig11349.870.1 vs. uniprot
Match: A0A2E7KCV9_9PLAN (Beta-Ig-H3/fasciclin n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KCV9_9PLAN) HSP 1 Score: 134 bits (337), Expect = 3.420e-33 Identity = 98/276 (35.51%), Postives = 154/276 (55.80%), Query Frame = 1 Query: 16 GQLDTVITALTTAMMDGNLSDPKGSFTVFIPTDKAFLKAGLGPGSMAAL----PQEIVENLLLYHTLHGAIVEADIEK--DATLFTALNIDLRTQ-GAVLVDSLGERSNIVEADVACSNGYLHVVDGVLMPPDLMTSLSTYNAKGGPYEGVFDVLQTSLDLTNMSRELSGLKGPYTLLAPTDDAFASL--GLNTSTITGANRTALELVLRYHIVEGLVDAENIETASPLTTIAATQMTVSGEGVLGDSQGRSADILATDLVSSNGIMHAISSVMLP 816 G T+ TALT A + L + KG FTVF PTD+AF K L PG++ L + + ++L YH + G + A + K A +D+ T+ G+V+VD + +++AD+ CSNG +HV+D V++P D + T +A G F+ L T+ ++ LS KGP+T+ APTD+AFA L G S + N+ L +L+YH+V G V +E+ +A T+ ++ +S G G ++ A IL TD+ +SNG++H I +V+LP Sbjct: 40 GSFKTLATALTEADLVKAL-EGKGPFTVFAPTDEAFSK--LPPGTVETLLKPENKSKLVDILTYHVVSGEVPAAKVVKLTGAETLNGQRVDIITKDGSVMVDG----ATVIKADIKCSNGIIHVIDQVILPAD-KNLVETASAAGK-----FNTLLTAATKAGLAGVLSE-KGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSG--GVAKVNQAKILKTDIDASNGVIHVIDAVILP 299
BLAST of mRNA_H-paniculata_contig11349.870.1 vs. uniprot
Match: A0A2E0ZKH1_9CHLR (Adhesion lipoprotein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZKH1_9CHLR) HSP 1 Score: 135 bits (340), Expect = 4.770e-33 Identity = 95/281 (33.81%), Postives = 149/281 (53.02%), Query Frame = 1 Query: 16 GQLDTVITALTTAMMDGNLSDPKGSFTVFIPTDKAFLKAGLGPGSMAAL---PQEIVENLLLYHTLHGAIVEADIEKDATLFTALNIDLRTQGAVLVDS---LGERSNIVEADVACSNGYLHVVDGVLMPPDLMTSLSTYN-AKGGPYEGVFDVLQTSLDLTNMSRELSGLKGPYTLLAPTDDAFASLGLNT-STITGANRTALELVLRYHIVEGLVDAENIETASPLTTIAATQMTVS---GEGVLGDSQGRSADILATDLVSSNGIMHAISSVMLPFSL 825 G+ T++TAL A + L+ G+FTVF PTD AF A L G++ +L P+ + ++LLYH + GA++ + TL +A + + D L E +V D+ SNG +HV+D VL+PP + + + +G F L +L+ ++ L+G +G +T+ APTDDAFA+L T + AL VL YH+ EG+V AE + T TT+ +T++ G +L DS ++ TD+ +SNGI+H I V+LP S+ Sbjct: 67 GRFTTLVTALEAAGLAETLAGD-GAFTVFAPTDDAF--AALPEGTVPSLLEDPEGALTDVLLYHVVDGAVMAETV---VTLESASTLQGEDVSITVTDGNVFLNENVQVVTTDIEASNGVIHVIDAVLLPPSMSAEEEAPSITEIAVADGRFTTLVAALEAAGLAETLAG-EGEFTVFAPTDDAFAALPEGTVEALLEDPEGALTEVLLYHVAEGVVPAETVVTLESATTLQGEDVTIAVEDGSVILNDS----VQVIITDIAASNGIIHVIDGVLLPPSM 336
BLAST of mRNA_H-paniculata_contig11349.870.1 vs. uniprot
Match: A0A356ELT2_9PLAN (Beta-Ig-H3/fasciclin n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356ELT2_9PLAN) HSP 1 Score: 131 bits (330), Expect = 5.480e-33 Identity = 90/274 (32.85%), Postives = 146/274 (53.28%), Query Frame = 1 Query: 16 GQLDTVITALTTAMMDGNLSDPKGSFTVFIPTDKAFLKAGLGPGSMAALPQ--EIVENLLLYHTLHGAIVEADIEK--DATLFTALNIDLRTQ-GAVLVDSLGERSNIVEADVACSNGYLHVVDGVLMPPDLMTSLSTYNAKGGPYEGVFDVLQTSLDLTNMSRELSGLKGPYTLLAPTDDAFASLGLNT--STITGANRTALELVLRYHIVEGLVDAENIETASPLTTIAATQMTVSGEGVLGDSQGRSADILATDLVSSNGIMHAISSVMLP 816 G T+ AL A + L KG FTVF PTD+AF K G P+ E + +L YH + G I+ AD+ K +A N+ ++ G V VD+ +N+V+ D+ SNG +HV+D V++P D++ + G F L +L ++ + L G KGP+T+ APTD+AF+ L T + N+ L +L YH+V G V A ++ + T+ ++T++ +G G + +A+++ TD+ +SNG++H I +VMLP Sbjct: 41 GSFKTLAAALKAADLVETLKG-KGPFTVFAPTDEAFSKLPKGTVENLLKPENKEKLAGILTYHVVAGKIMAADVVKLKEAKTIQGSNVSIKVAYGKVKVDN----ANVVKTDIQTSNGVIHVIDAVIIPKDIVDTAVE--------AGSFKTLAAALKAADLVKTLKG-KGPFTVFAPTDEAFSKLPKGTVEDLLKPENKEKLAGILAYHVVPGKVMAADVVKLTKAKTVQGAEVTITVKG--GKVKVDNANVVKTDIQTSNGVIHVIDAVMLP 298
BLAST of mRNA_H-paniculata_contig11349.870.1 vs. uniprot
Match: A0A3L7NFZ5_9BACT (Fasciclin domain-containing protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7NFZ5_9BACT) HSP 1 Score: 132 bits (331), Expect = 5.810e-33 Identity = 98/276 (35.51%), Postives = 145/276 (52.54%), Query Frame = 1 Query: 16 GQLDTVITALTTAMMDGNLSDPKGSFTVFIPTDKAFLKAGLGPGSMAALPQEI--VENLLLYHTLHGAIVEADIEK--DATLFTALNIDLRTQ-GAVLVDSLGERSNIVEADVACSNGYLHVVDGVLMPPDLMTSLSTYNAKGGPYEGVFDVLQTSLDLTNMSRELSGLKGPYTLLAPTDDAFASLGLNT--STITGANRTALELVLRYHIVEGLVDAENIETASPLTTIAATQMT--VSGEGVLGDSQGRSADILATDLVSSNGIMHAISSVMLP 816 G T++ A+ A + L +G FTVF PTD+AF K G P+ ++ +L YH + G ++ AD+ K A ID+ + G V VD +N+V+ D+ACSNG +HV+D V++P D + T A G F L +L + L G +GP+T+ APTD+AFA L T S + N+ L VL YH+V G V A ++ TT+ + T VS +GV D+ A ++ATD+ +SNG++H I SV+LP Sbjct: 58 GSFKTLVAAVKAAGLVETLKG-EGPFTVFAPTDEAFAKLPKGTVESLLKPENKAKLQAILTYHVVAGKVMAADVVKIKGAVSVQGQQIDVVVKDGKVKVDG----ANVVKTDIACSNGVIHVIDSVILPAD-KDIVDTAVAAGS-----FKTLAAALTAAGLVETLKG-EGPFTVFAPTDEAFAKLPAGTVESLLLPENKEKLIAVLTYHVVAGKVLASDVVKLKSATTVNGKEATIKVSDKGVTVDA----ARVVATDIEASNGVIHVIDSVILP 317
BLAST of mRNA_H-paniculata_contig11349.870.1 vs. uniprot
Match: A0A3L7RRP5_9BACT (Fasciclin domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7RRP5_9BACT) HSP 1 Score: 131 bits (330), Expect = 8.500e-33 Identity = 94/276 (34.06%), Postives = 141/276 (51.09%), Query Frame = 1 Query: 16 GQLDTVITALTTAMMDGNLSDPKGSFTVFIPTDKAFLKAGLGPGSMAALPQEI--VENLLLYHTLHGAIVEADIEK--DATLFTALNIDLR-TQGAVLVDSLGERSNIVEADVACSNGYLHVVDGVLMPPDLMTSLSTYNAKGGPYEGVFDVLQTSLDLTNMSRELSGLKGPYTLLAPTDDAFASLGLNT--STITGANRTALELVLRYHIVEGLVDAENIETASPLTTIAATQMT--VSGEGVLGDSQGRSADILATDLVSSNGIMHAISSVMLP 816 G T++ A+ A + L G FTVF PTD+AF K G P+ ++ +L YH + G ++ AD+ K A +D+ T G V VD ++ +++ D+ACSNG +HV+D V++P D S A G F L +L + L G +GP+T+ APTD+AFA L T S + NR L +L YH+V G V A ++ T+ ++ V GV+ DS A ++ATD+ +SNG++H I SV+LP Sbjct: 60 GSFKTLVAAVKAAGLVETLKGD-GPFTVFAPTDEAFAKLPAGTVESLLKPENKAKLQAILTYHVVSGKVLAADVVKLKGAVTVQGQQVDIAVTDGTVTVD----KAKVLKTDIACSNGVIHVIDSVILPADSDIVDSAVAA------GSFKTLAAALTAAELVETLKG-EGPFTVFAPTDEAFAKLPAGTVESLLKPENREKLVAILTYHVVPGKVLASDVVKLKSAKTVNGKEVVIKVGDSGVMIDS----AKVVATDIETSNGVIHVIDSVILP 319
BLAST of mRNA_H-paniculata_contig11349.870.1 vs. uniprot
Match: UPI000479666E (fasciclin domain-containing protein n=1 Tax=Asinibacterium sp. OR53 TaxID=925409 RepID=UPI000479666E) HSP 1 Score: 130 bits (327), Expect = 2.050e-32 Identity = 88/269 (32.71%), Postives = 153/269 (56.88%), Query Frame = 1 Query: 37 TALTTAMMDGNLSDPKGSFTVFIPTDKAFLKAGLGPGSMAALPQEIVENLLLYHTLHGAIVEADIEK--DATLFTALNIDL---RTQGAVLVDSLGERSNIVEADVACSNGYLHVVDGVLMPPDLMTSLSTYNAKGGPYEGVFDVLQTSLDLTNMSRELSGLKGPYTLLAPTDDAFASLGLNT-STITGANRTALELVLRYHIVEGLVDAENIETASPLTTIAATQMTV---SGEGVLGDSQGRSADILATDLVSSNGIMHAISSVMLP 816 TA+ A + LS G+FTVF P D AF +G+ ++ +L + ++N+LLYHTL I+ AD+ +A++ A +L + V V+ + + +ADV SNG +HV++ VL+PP T + G Y V VL+ S TN+++ LSG GP+T+ APT+ AF + G ++ + I A+ L +L YH++ V + ++ + +TT+ ++T+ +G V G+S ++ I+AT+++++NG++H I V+LP Sbjct: 52 TAVVKAGLATTLSG-SGTFTVFAPDDNAFQTSGISASTIGSLSSDQLKNILLYHTLTSKIMSADVPAGPNASVKAANGGELFVTKNSSGVFVNGV----KVTQADVPASNGVIHVINRVLLPPAGNLVQVTQSDTGFSYL-VAAVLRASQGSTNVAQVLSG-NGPFTVFAPTNQAFRNAGFSSEAAINAADPNTLAAILTYHVIGARVFSSDLVNGAMVTTLNGGKVTIGLTNGATVKGNSNKTASAIIATNIMATNGVVHVIDQVLLP 313 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11349.870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11349.870.1 >prot_H-paniculata_contig11349.870.1 ID=prot_H-paniculata_contig11349.870.1|Name=mRNA_H-paniculata_contig11349.870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp MSEFYGQLDTVITALTTAMMDGNLSDPKGSFTVFIPTDKAFLKAGLGPGSback to top mRNA from alignment at H-paniculata_contig11349:4048..5521+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11349.870.1 ID=mRNA_H-paniculata_contig11349.870.1|Name=mRNA_H-paniculata_contig11349.870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1474bp|location=Sequence derived from alignment at H-paniculata_contig11349:4048..5521+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11349:4048..5521+ >mRNA_H-paniculata_contig11349.870.1 ID=mRNA_H-paniculata_contig11349.870.1|Name=mRNA_H-paniculata_contig11349.870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig11349:4048..5521+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |