mRNA_H-paniculata_contig11338.864.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11338.864.1 vs. uniprot
Match: D8LJZ5_ECTSI (ND11 homolog, NADH dehydrogenase (Ubiquinone) subunit 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ5_ECTSI) HSP 1 Score: 686 bits (1769), Expect = 1.170e-243 Identity = 346/439 (78.82%), Postives = 381/439 (86.79%), Query Frame = 1 Query: 4 ETEVMRVLPRENEDINSEWIHDKARFSYDGLKRQRLDRPYASLSRDGGGPALAPVTWTQAFEAVRQLTESPTAFVVGRGVDLETAVAVKDLALRMGTAAVYKEGGIAGEDYPNHLKLTDVDEADLILLVGINPRFEATMLNVRIRQRFLQGGLTVGTVGAPVNLTYDTINLGLTPASLQDLAHGNHTFCEALASAEKPLVLYGSAVLEGDDAQSIVSILKSLNAKTRAGESTDCVHLVSSHANDVGLTALHLDQLPGGPAGVDSAETFYLLDLADSSLATQLKAAGKAVVYHGTHGDEHVGGCDVLLPGATFVEKEGLYVNTEGRPQRSAKVYPPPGIAREDWKIIRALGEFVGVELPYSNEDEMAERAHTLVPLEL--DEVTPSMVGPISGLPKGEAHIHETTLGPLVHDFYRTDAVSRASITMAKTSALHRKYATNW 1314 ETEVMRVLPRENE+INSEWIHDKARFSYDGLKRQRLDRPYA+L D G +LAPVTW Q EAV L + PTAFVVGRGVDLETAVAVKDLALRMG AAVYKEGGI ED+PNHLKL DVD+ADLIL VG+N R EATMLNVRIRQR+L+GGLTVGT+GAPV LTYD NLGLTPASL +LA G H FC+ALA+AEKPL+LYGSAVLE DD+ SI+ +LKSLNA+T+AGES DCVHLVSSHANDVGLTALHLD LP GPA D AETFYL+DLADS+LA +LK AGKAVVY GTHGDE++G D LLPGATFVEKEG YVNTEGRPQRSA V+PPPGIAREDWKI+RALGEFVGV LPYS+++EM ER TLVPL L DE++ S VGPI G PKGE +HETTLGPLVHDFYRTDAVSRAS+TMAKTSALHR+ A+ W Sbjct: 134 ETEVMRVLPRENEEINSEWIHDKARFSYDGLKRQRLDRPYATLMGDDGSASLAPVTWKQGLEAVAGLVDRPTAFVVGRGVDLETAVAVKDLALRMGNAAVYKEGGIEAEDHPNHLKLADVDDADLILHVGLNARLEATMLNVRIRQRWLRGGLTVGTIGAPVRLTYDAENLGLTPASLVELAEGKHPFCKALAAAEKPLILYGSAVLERDDSASIMKLLKSLNAQTKAGESQDCVHLVSSHANDVGLTALHLDPLPRGPARADVAETFYLVDLADSALAAELKEAGKAVVYQGTHGDENLGEVDALLPGATFVEKEGTYVNTEGRPQRSAFVFPPPGIAREDWKIVRALGEFVGVTLPYSDDEEMEERVQTLVPLTLNMDELSHSQVGPIPGPPKGEIRVHETTLGPLVHDFYRTDAVSRASVTMAKTSALHRETASTW 572
BLAST of mRNA_H-paniculata_contig11338.864.1 vs. uniprot
Match: A0A512DK29_9PROT (NADH-quinone oxidoreductase n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DK29_9PROT) HSP 1 Score: 280 bits (717), Expect = 8.770e-84 Identity = 180/443 (40.63%), Postives = 252/443 (56.88%), Query Frame = 1 Query: 10 EVMRVLPRENEDINSEWIHDKARFSYDGLKRQRLDRPYASLSRDGGGPALAPVTWTQAFEA----VRQLTESPTAFVVGRGVDLETAVAVKDLALRMGT--------AAVYKEGGIAGEDYPNHLKLTDVDEADLILLVGINPRFEATMLNVRIRQRFLQGGLTVGTVGAPVNLTYDTINLGLTPASLQDLAHGNHTFCEALASAEKPLVLYGSAVLEGDDAQSIVSILKSL-NAKTRAGESTDCVHLVSSHANDVGLTALHLDQLPG----GPAGVDSAETFYLLDLADSSLATQLKAA--GKA-VVYHGTHGDEHVGGCDVLLPGATFVEKEGLYVNTEGRPQRSAKVYPPPGIAREDWKIIRALGEFVGVELPYSNEDEMAERAHTLVPLELDEVTPSMVGPISGLPKGEAHIHETTLGPLVHDFYRTDAVSRASITMAK 1278 EVMRV+PR NED+N EW+ DK+RFSYDGLKRQRLDRPY + +DG L P TW +AF A V+ + A + G VD E+ VA+KDL +G+ AV+ AG Y + + +++AD ILL+G NPR+EA ++N RIR+R+L GGL VG +G ++LTY T LG P +LQD+ G H FC+ L A++P+++ GS L D ++ ++ + L + + + +++ + A VG L L LPG A + SA + +D+ A ++ A GKA V+Y G HGD DV+LPGA + EK GLYVNTEGR Q + P G AREDWKIIRALGE +GV+LPY + + +R P+ ++V G I P++ ++Y TD +SRAS TMAK Sbjct: 239 EVMRVIPRLNEDVNEEWLADKSRFSYDGLKRQRLDRPY--VRKDG---KLQPATWAEAFAAIAAKVKGVPGERIAALAGDLVDAESMVALKDLVEGLGSRNLDCRQDGAVFDTSARAG--YLFNTTIAGIEQADAILLIGTNPRWEAAIVNARIRKRYLMGGLKVGVIGQQLDLTYPTTYLGAGPQTLQDVVDGKHAFCDVLKDAKRPMLILGSGALRRADGPAVHALARQLAESFNLVQDGWNGFNVLHTAAARVG--GLELGFLPGQGGKATAEILSATSAGQIDVVYLLGADEIDTASLGKAFVIYQGHHGDRGAHRADVILPGAAYTEKNGLYVNTEGRVQMARMAAFPLGEAREDWKIIRALGEQLGVKLPYDSLSHVRKRLADASPV--FRSIEALVAAEWGTFGRAGTIENAPFEPIIENYYMTDPISRASATMAK 670
BLAST of mRNA_H-paniculata_contig11338.864.1 vs. uniprot
Match: UPI001A96E484 (NADH-quinone oxidoreductase subunit NuoG n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A96E484) HSP 1 Score: 276 bits (706), Expect = 3.600e-82 Identity = 181/451 (40.13%), Postives = 264/451 (58.54%), Query Frame = 1 Query: 7 TEVMRVLPRENEDINSEWIHDKARFSYDGLKRQRLDRPYASLSRDGGGPALAPVTWTQAFEAVRQLTESPT----AFVVGRGVDLETAVAVKDLALRMGTA--------AVYKEGGIAGEDYPNHLKLTDVDEADLILLVGINPRFEATMLNVRIRQRFLQGGLTVGTVGAPVNLTYDTINLGLTPASLQDLAHGNHTFCEALASAEKPLVLYGSAVLEGDDAQSIVSILKSLNAKT--RAGESTDCVHLVSSHANDVGLTALHLDQLPGGPAGVDSA-----------ETFYLLDLADSSLATQLKAAGKAVVYHGTHGDEHVGGCDVLLPGATFVEKEGLYVNTEGRPQRSAKVYPPPGIAREDWKIIRALGEFVGVELPYSNEDEMAERAHTLVPL--ELDEVTPSMVGPISGLPKGEAHIHETTLGPLVHDFYRTDAVSRASITMAK 1278 +EVMRVLPR NED+N EW++DK+RF+YDGLKRQRLDRPY + +DG L P +W +AF+AV Q + + A + G VD+E+ +A+K+L +G+A A++ AG Y + + V++AD+ILLVG NPR+E +++N RIR+R+LQGGL VG +G +LTY +LG L + G+H F E L +A++P+++ G + DA +I + +++ A+T GE + +++ + A VG AL + LPG P G D A + YLL + +A KA V+Y G HGD DV+LPGA + EK LYVNTEGRPQ + PPG AREDWKI+RAL E +G +LPY + ++ + + P+ ++ VTP+ G G + + + P V +FY TD +SRASITMA+ Sbjct: 238 SEVMRVLPRVNEDVNEEWLNDKSRFAYDGLKRQRLDRPY--VRKDG---KLVPASWVEAFQAVAQKLKGTSGDRIAAIAGDLVDVESTLALKELMTALGSANIDCRQDGALFDTSSRAG--YLFNSTIAGVEQADVILLVGTNPRWEGSLINARIRKRYLQGGLQVGLIGESRDLTYPYAHLGTGADLLSGILDGSHAFAETLRNAKRPMLILGMGAFQRADALAIQAAARAV-AETFNMIGEGWNGYNVLHTAAGRVG--ALDVGFLPG-PGGRDLAGILDGASNGAIDVVYLLGADEIDMARLGKAF---VIYQGHHGDAGAQRADVILPGAAYTEKNALYVNTEGRPQLARLATFPPGEAREDWKILRALSELLGHKLPYDSVIQLRKHLADVNPIFAKIGAVTPAAWG---GFGRSGSLDAAPFVSP-VANFYMTDPISRASITMAR 670
BLAST of mRNA_H-paniculata_contig11338.864.1 vs. uniprot
Match: A0A2U1WU32_9PROT (NADH-quinone oxidoreductase n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1WU32_9PROT) HSP 1 Score: 273 bits (697), Expect = 8.180e-81 Identity = 184/451 (40.80%), Postives = 245/451 (54.32%), Query Frame = 1 Query: 10 EVMRVLPRENEDINSEWIHDKARFSYDGLKRQRLDRPYASLSRDGGGPALAPVTWTQAFEAVRQLTESPT----AFVVGRGVDLETAVAVKDLALRMGTAAV--------YKEGGIAGEDYPNHLKLTDVDEADLILLVGINPRFEATMLNVRIRQRFLQGGLTVGTVGAPVNLTYDTINLGLTPASLQDLAHGNHTFCEALASAEKPLVLYGSAVLEGDDAQSIVSILKSLNAKTRAGESTDCVHLVSSHANDVGLTALHLDQLPGGPAGVDSAETFYLLDLADSSLATQLKA-------AGKA-VVYHGTHGDEHVGGCDVLLPGATFVEKEGLYVNTEGRPQRSAKVYPPPGIAREDWKIIRALGEFVGVELPYSNEDEMAERAHTLVPLELDEVTPSMVGPISGLPKGEAHIHETTLGPL--------VHDFYRTDAVSRASITMAK 1278 EVMRV+PR NED+N EWI DK RF+YDGLKRQRLDRPY + R+G L P TW +AF A+ + + A + G D E+ +A+K+L + +G++++ Y AG Y + + +++AD+ILLVG NPR+EA ++N RIR+R+L GGL VG VG V+LTY +LG P +LQDL GN F E L A++PL++ G D ++ + ++ L A+T D H + L + LPG P G D A + SL L A GKA VVY G HGD DV+LPGA + EK YVNTEGRPQ + PPG AREDWKIIRAL E +G LPY + ++ R L EV P + G I GL A T G + + +FY TD +SRAS+TMA+ Sbjct: 239 EVMRVIPRTNEDVNEEWISDKTRFAYDGLKRQRLDRPY--VRRNG---KLQPATWAEAFAAIAEQVKGKPGNGLAAIAGDLADTESMLALKELMVALGSSSIDCRQDGARYDTSSRAG--YIFNSGIAGIEKADVILLVGTNPRWEAPIVNARIRKRYLMGGLKVGVVGPQVDLTYPATHLGNGPQALQDLVAGNGDFAEVLKGAKRPLIIVGQGAFRRADGAAVHAAVRQL-AETYNVVQADWNGFNVLHTAASRVGGLDIGFLPG-PGGRDVAGILEGAQKGEVSLVYLLGADEIDMAKLGKAFVVYQGHHGDAGASRADVILPGAAYTEKNATYVNTEGRPQLARLAAFPPGEAREDWKIIRALSEHLGATLPYDSLTQLRRR--------LVEVNP-VFGNIGGLTPA-AWTAFGTAGAIDPAPFVSPIANFYMTDPISRASVTMAR 670
BLAST of mRNA_H-paniculata_contig11338.864.1 vs. uniprot
Match: H0ZI24_TAEGU (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=6 Tax=Passeriformes TaxID=9126 RepID=H0ZI24_TAEGU) HSP 1 Score: 273 bits (699), Expect = 8.590e-81 Identity = 184/453 (40.62%), Postives = 248/453 (54.75%), Query Frame = 1 Query: 10 EVMRVLPRENEDINSEWIHDKARFSYDGLKRQRLDRPYASLSRDGGGPALAPVTWTQAFEAVRQLTES--PTAFVVGRGVDLETAVAVKDLALRMG-----TAAVYKEGGIAGEDYPNHL---KLTDVDEADLILLVGINPRFEATMLNVRIRQRFLQGGLTVGTVGAPVNLTYDTINLGLTPASLQDLAHGNHTFCEALASAEKPLVLYGSAVLEGDDAQSIVSILKSL--NAKTRAGESTDCVHLVSSHANDVGLTALHLDQLPGGPAGVDSA-ETFYLLDLADSSLATQLKAAGKA-VVYHGTHGDEHVGGCDVLLPGATFVEKEGLYVNTEGRPQRSAKVYPPPGIAREDWKIIRALGEFVGVELPYSNEDEMAERAHTLVPLELDEVTPSMVGPISGLPKGEAHIHETTLGPL----------------VHDFYRTDAVSRASITMAK 1278 EVMR+LPR +EDIN EWI DK RF+YDGLKRQRL +P + + G A +W V ++ A VVG VD E +A+KDL RM T ++ G + N+L K+ V+EAD++LLVG NPRFEA + N RIR+ +L L V VG+PVNLTY +LG +P LQD+A G H F + L SA+KP+V+ GSA L+ D +I + + ++ NA+ R+G D + H + AL L PG A SA + YLL ADS T+ ++Y G HGD D++LPGA + EK YVNTEGR Q++ PPG+AREDWKIIRA+ E G+ LPY N D++ +R L+EV+P++V + + I L L + DFY TD++SRAS TMAK Sbjct: 270 EVMRILPRLHEDINEEWISDKTRFAYDGLKRQRLTQPM--IKNEKGVFVYA--SWEDVLPRVAGVSVEGKDIAAVVGGLVDAEALIALKDLLNRMNCDTLCTEEIFPTAGAGTDLRSNYLLNTKIAGVEEADVLLLVGTNPRFEAPLFNARIRKSWLHNDLQVALVGSPVNLTYRYEHLGESPQILQDIASGKHAFSKVLDSAKKPMVVVGSAALQRGDGAAIHAAVSTIAQNARARSGAGADWKVMNILHRVASQVAALDLGFKPGVEAIRKSAPKVLYLLG-ADSGCITREDLPEYCFIIYQGHHGDVGAPMADIILPGAAYTEKAATYVNTEGRAQQTRVAVTPPGMAREDWKIIRAVSELAGLTLPYENLDQIRKR--------LEEVSPNLVR-YDDVEEANYFIQANELAKLAKQQLLADPLVPPQLTIKDFYMTDSISRASQTMAK 708
BLAST of mRNA_H-paniculata_contig11338.864.1 vs. uniprot
Match: UPI00035952C6 (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035952C6) HSP 1 Score: 273 bits (699), Expect = 1.070e-80 Identity = 180/447 (40.27%), Postives = 249/447 (55.70%), Query Frame = 1 Query: 10 EVMRVLPRENEDINSEWIHDKARFSYDGLKRQRLDRPYASLSRDGGGPALAPVTWTQAF----EAVRQLTESPTAFVVGRGVDLETAVAVKDLALRMGTAAVYKE-------GGIA-GEDYPNHLKLTDVDEADLILLVGINPRFEATMLNVRIRQRFLQGGLTVGTVGAPVNLTYDTINLGLTPASLQDLAHGNHTFCEALASAEKPLVLYGSAVLEGDDAQSIVSILKSLNAKTRAG---ESTDCVHLVSSHANDVGLTALHLDQLPGGPAGVDSAETFYLLDLADSSLATQLKAAGKA-VVYHGTHGDEHVGGCDVLLPGATFVEKEGLYVNTEGRPQRSAKVYPPPGIAREDWKIIRALGEFVGVELPYSNEDEMAERAHTLVPL-----ELDEVTPSMVGPISGLPKGEAHIHETTLGPLV---HDFYRTDAVSRASITMAK 1278 EVMR+LPR NEDIN EWI DK RF+YDGLKRQRL P+ R G G L P W AF E V A V G VD E +A+KD+ R+G+ +V E GI +Y + ++ ++E+DLILLVG NPR EA ++N RIR+ ++ L V +GAPV+L+YD LG + L D+ + H + L A KP+++ GSAVL+G+++ +I+ +KSL+ K RAG E +++ + AN VG AL L PG A S + L AD+ + A VVY G HGD DV+LP A + EK+ +YVNTEGR Q + PPG+AR+DWKIIRAL E +GV LPY ++ R + P ++++ + + +P+ E+ L P + DFY TD +SRAS+TMAK Sbjct: 278 EVMRILPRLNEDINEEWISDKTRFAYDGLKRQRLTTPFV---RSGTGE-LVPADWESAFVKIAERVNATDGDLIAGVAGGQVDAEALIALKDMLNRLGSESVCTEEKFPMTNSGIDFRSNYIMNTTISGIEESDLILLVGTNPRLEAPLVNARIRKTWINSDLCVTVLGAPVDLSYDYQYLGDSFELLTDILNDKHPLAKGLKEASKPMIILGSAVLQGENSGAILDTVKSLSEKLRAGSEQEDWKVFNVLHTQANQVG--ALDLGYAPGVDAMKGSKPSVLFLLGADAGTVKREDLYENALVVYIGHHGDYGAQIADVVLPAAAYTEKDAVYVNTEGRAQIGRQAVSPPGMARQDWKIIRALSEMLGVTLPYDKLSDVRARLGEVSPTFNHAGQVEDAGFFNLSDSATVPRKESRPAVQPLSPALLSLRDFYMTDPISRASLTMAK 718
BLAST of mRNA_H-paniculata_contig11338.864.1 vs. uniprot
Match: A0A4R3JH71_9PROT (NADH-quinone oxidoreductase n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3JH71_9PROT) HSP 1 Score: 272 bits (696), Expect = 1.070e-80 Identity = 178/444 (40.09%), Postives = 246/444 (55.41%), Query Frame = 1 Query: 10 EVMRVLPRENEDINSEWIHDKARFSYDGLKRQRLDRPYASLSRDGGGPALAPVTWTQAFEAVR----QLTESPTAFVVGRGVDLETAVAVKDLALRMGTAAVYKEGGIAGEDYPN------HLKLTDVDEADLILLVGINPRFEATMLNVRIRQRFLQGGLTVGTVGAPVNLTYDTINLGLTPASLQDLAHGNHTFCEALASAEKPLVLYGSAVLEGDDAQSIVSILKSLNAKTRA-GESTDCVHLVSSHANDVGLTALHLDQLPGG---PAGVDSA-----ETFYLLDLADSSLATQLKAAGKAVVYHGTHGDEHVGGCDVLLPGATFVEKEGLYVNTEGRPQRSAKVYPPPGIAREDWKIIRALGEFVGVELPYSNEDEMAERAHTLVPL--ELDEVTPSMVGPISGLPKGEAHIHETTLGPLVHDFYRTDAVSRASITMAK 1278 EVMRVLPR +ED+N EWI DKARFSYDGLKRQRLD PY + +DG LAP TW +AF A++ L A + G D+E A+KDL + +G+ + A D N + + +DEAD +L+VG NPR EA ++N R+R+R+L+GG+ + VG +LTY +LG L+D+A G H F + L A +P+V+ G L D +I+++L +L K + + +++ A VG + GG PA ++A E YLL + ++ VVY G HGD DV+LP A + EK YVNTEGR QR+ + PPG AREDW I+RAL +G LPY N D++ R + P+ LD +TP+ P+SG +GE + L V +FYRTD +SRASITMAK Sbjct: 239 EVMRVLPRLHEDVNEEWISDKARFSYDGLKRQRLDTPY--VRKDG---KLAPATWDEAFAAIQIRVAALGGDKIAAIAGDQADVEAMCALKDLMVNLGSPHIDCRQDGAPLDAANRGGYLFNSTIAGIDEADAVLIVGSNPRLEAPIINARLRKRYLKGGVKIAAVGPQADLTYRHEHLGDGLGVLRDIAGGGHPFADVLKGAARPMVIVGQGALARADGAAILALLSALVEKLGVVKDGWNGFNVLHGAAARVGGLDIGFVPAKGGLAAPAIAEAAKSGAIEVLYLLGADEIDMSD---LGDVFVVYQGHHGDVGAHRADVILPAAAYTEKNATYVNTEGRVQRTLRAVFPPGEAREDWAIVRALSAVLGKPLPYDNLDQVRRRMTEVNPVFATLDAITPAKWLPLSG--EGEV-FSDHPLVSCVENFYRTDPISRASITMAK 671
BLAST of mRNA_H-paniculata_contig11338.864.1 vs. uniprot
Match: A0A2U1PTP3_ARTAN (NADH-ubiquinone oxidoreductase n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PTP3_ARTAN) HSP 1 Score: 266 bits (681), Expect = 1.510e-80 Identity = 169/442 (38.24%), Postives = 235/442 (53.17%), Query Frame = 1 Query: 10 EVMRVLPRENEDINSEWIHDKARFSYDGLKRQRLDRPYASLSRDGGGPALAPVTWTQAF----EAVRQLTESPTAFVVGRGVDLETAVAVKDLALRMGTAAVYKEGGIAGED------YPNHLKLTDVDEADLILLVGINPRFEATMLNVRIRQRFLQGGLTVGTVGAPVNLTYDTINLGLTPASLQDLAHGNHTFCEALASAEKPLVLYGSAVLEGDDAQSIVSILKSLNAKTRAGESTDCVHLVSSHANDVGLTALHLDQLPGGPAGVDSAETFYLLDLADSSLATQLKAAGKAVVYHGTHGDEHVGGCDVLLPGATFVEKEGLYVNTEGRPQRSAKVYPPPGIAREDWKIIRALGEFVGVELPYSNEDEMAERAHTLVP--LELDEVTPSMVGPISGLPKGEAHIHETTLGPLVHDFYRTDAVSRASITMAKTSALHRK 1299 EVMR++PR NEDIN EWI DK RF YDGLKRQRL+ P G PV+W A E + Q+ V G+ D E+ + +KD ++G+ ++ EG + Y + + +++AD LLVG PR EA M+N RIR+ VG +G+P + YD +LG P +L ++A G H+F AL+ A+ P ++ G+ + E +D +I S+++S+ AK D + N AL L +P ++SA+ YL+ D +L K A VVY G HGD+ V +V+LP A F EKEG YVNTEG Q++ P G AREDWKIIRAL E GV LPY + R T+ P L +DE P+ S P + + T G V +FY TDA++RAS MA+ SAL +K Sbjct: 56 EVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIR----GADGRFQPVSWRDALAVVAEVIHQVKPEEIVGVAGKLSDAESMILLKDFLNKLGSNNIWCEGNGKNTNADLRSGYLLNSSIQGLEKADCFLLVGTQPRVEAAMVNARIRKTVRATQAKVGYIGSPADFNYDHEHLGTGPETLVEIAEGRHSFSSALSKAKNPAIIIGAGIFEREDKDAIFSVIQSIAAKNENLIRPDWNGVNVLLLNAAQAAALDLGLVPESDNSIESAKFLYLMGADDVNLDKLPKDA--FVVYQGHHGDKGVYRANVILPAAAFSEKEGTYVNTEGCAQQTVPAVPTVGDAREDWKIIRALSEVSGVSLPYDTISGVRSRIRTVAPNLLHVDEREPATFS-TSLKPASTSKMSATPFGVTVDNFYMTDAITRASKIMAQCSALLKK 490
BLAST of mRNA_H-paniculata_contig11338.864.1 vs. uniprot
Match: A0A3Q0ITM9_DIACI (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A3Q0ITM9_DIACI) HSP 1 Score: 266 bits (679), Expect = 1.840e-80 Identity = 177/456 (38.82%), Postives = 251/456 (55.04%), Query Frame = 1 Query: 10 EVMRVLPRENEDINSEWIHDKARFSYDGLKRQRLDRPYASLSRDGGGPALAPVTWTQAFEAVRQ-LTESPTAFVVGRGVDLETAVAVKDLALRMGTAAVYKEGGI----AGEDY-PNHL---KLTDVDEADLILLVGINPRFEATMLNVRIRQRFLQGGLTVGTVGAPVNLTYDTINLGLTPASLQDLAHGNHTFCEALASAEKPLVLYGSAVLEGDDAQSIVSILKSLNAKTRAGESTDC----VHLVSSHANDVGLTALHLDQLPGGPAGVDSA-ETFYLLDLADSSLATQLKAAGKAVVYHGTHGDEHVGGCDVLLPGATFVEKEGLYVNTEGRPQRSAKVYPPPGIAREDWKIIRALGEFVGVELPYSNEDEMAERAHTLVPL-----ELDEV------TPSMVGPISGLPKGEAHIHETTLGPLVHDFYRTDAVSRASITMAKT-SALHRK 1299 EV+RVLPR NEDIN EW+ DK RF+YDGLKRQRL P+ R+ G +A W A AV Q L S A VVG D E VA+KDL ++G+ +Y E AG D N+L K+ +EADLILL+G NPRFEA + N RIR+ +L L V +G V+L YD +LG + ++ LA G+H F + L++A+KPL++ G+ +L D +++++++ L AK C ++++ A+ V AL + PG A + + +LL + S++ ++Y G HGD D +LPGA + EK+ YVNTEGR Q++ PPG+AREDWKIIRAL E +GV+LPY E+ +R + P E++E T G S L + + L D+Y TD +SRAS TMAK A+H++ Sbjct: 16 EVLRVLPRLNEDINEEWLADKGRFAYDGLKRQRLLTPFV---RNCDGQLVA-TEWEDALIAVAQKLQTSEVAGVVGSLADAEAMVALKDLLNKLGSEDLYTEYAFPLEGAGTDLRANYLLNNKIAGAEEADLILLIGTNPRFEAPLFNARIRKGYLTNELDVAYIGPKVDLRYDYEHLGESADLIKQLASGSHPFSKKLSAAKKPLIVVGADMLSRSDGAAVLALVQQLAAKVTCESDVPCDWKVLNILQKAASQV--AALDIGYKPGTSAIREKPPKVLFLLGADEGSISRDDVGKDCFIIYQGHHGDHGASIADAILPGAAYTEKQSTYVNTEGRAQQTLTAVTPPGLAREDWKIIRALSEIIGVKLPYDTLLEIRDRLGQVAPHLVRYGEVEEANYEEQATELAKGVSSNLSSEPVDVKQKNL----EDYYMTDPISRASGTMAKCIQAVHKQ 461
BLAST of mRNA_H-paniculata_contig11338.864.1 vs. uniprot
Match: A0A6P4ZAH8_BRABE (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZAH8_BRABE) HSP 1 Score: 273 bits (697), Expect = 1.860e-80 Identity = 178/457 (38.95%), Postives = 247/457 (54.05%), Query Frame = 1 Query: 10 EVMRVLPRENEDINSEWIHDKARFSYDGLKRQRLDRPYASLSRDGGGPALAPVTWTQAF----EAVRQLTESPTAFVVGRGVDLETAVAVKDLALRMGTAAVYKE--------GGIAGEDYPNHLKLTDVDEADLILLVGINPRFEATMLNVRIRQRFLQGGLTVGTVGAPVNLTYDTINLGLTPASLQDLAHGNHTFCEALASAEKPLVLYGSAVLEGDDAQSIVSILKSLNAKTRAGESTDCVHLVSSHANDVGLTALHLDQLPGGPAGVDSA-----ETFYLLDLADSSLATQLKAAGKAVVYHGTHGDEHVGGCDVLLPGATFVEKEGLYVNTEGRPQRSAKVYPPPGIAREDWKIIRALGEFVGVELPYSNEDEMAERAHTLVPLELDEVTPSMVG--------------PISGLPKGEAHIHETTLGPLVH---DFYRTDAVSRASITMAK 1278 EVMR+LPR +EDIN EWI DK RF+YDGLKRQRL +P + +D G +L P TW A + + VVG VD E +A+KDL R+G+ A+ E G +Y + + V+EAD++LLVG NPRFEA + N R+R+ +L L V +GAPVNLTY+ +LG +P++LQDL G H + + LA A++P+V+ GS L+ D ++ + +L K R D V + + V LD G AGVD+ + +LL ++ + VVY G HGD DV+LP A + EK YVNTEGR Q++ PPG+AREDWK++RAL E G+ LPY DE+ R L EV+P++V +SGL +G+ I + L P + DF+ TD++SRAS TMAK Sbjct: 275 EVMRILPRLHEDINEEWISDKTRFAYDGLKRQRLTQP---MMKDDSG-SLGPCTWEDALLRTAGRLHGVRGEEVGAVVGGQVDAEALIALKDLLNRLGSEALCTEEIFPMNGAGTDLRSNYLLNTSIAGVEEADVLLLVGTNPRFEAPLFNTRVRKSWLHNDLQVAVLGAPVNLTYEYAHLGKSPSALQDLIDGKHPYSKVLADAKRPMVVVGSEALQRGDGAAVHKAVSALAQKLRTTSQADGEWRVLNVLHRVASQVAALDL--GYKAGVDAIRENPPKVLFLLGADGGAVTREDLPKDCFVVYQGHHGDVGAPMADVVLPAAAYTEKTATYVNTEGRAQQTRAAVNPPGMAREDWKVLRALSELAGLTLPYDTLDEVRGR--------LREVSPNLVRYGDVEDANYFKQAQELSGLVEGK--ISASPLQPTLQELKDFFMTDSISRASQTMAK 715 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11338.864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11338.864.1 >prot_H-paniculata_contig11338.864.1 ID=prot_H-paniculata_contig11338.864.1|Name=mRNA_H-paniculata_contig11338.864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=436bp MRVLPRENEDINSEWIHDKARFSYDGLKRQRLDRPYASLSRDGGGPALAPback to top mRNA from alignment at H-paniculata_contig11338:160..6357+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11338.864.1 ID=mRNA_H-paniculata_contig11338.864.1|Name=mRNA_H-paniculata_contig11338.864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6198bp|location=Sequence derived from alignment at H-paniculata_contig11338:160..6357+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11338:160..6357+ >mRNA_H-paniculata_contig11338.864.1 ID=mRNA_H-paniculata_contig11338.864.1|Name=mRNA_H-paniculata_contig11338.864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2616bp|location=Sequence derived from alignment at H-paniculata_contig11338:160..6357+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |