mRNA_H-paniculata_contig1125.800.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig1125.800.1 vs. uniprot
Match: D8LHP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP2_ECTSI) HSP 1 Score: 127 bits (320), Expect = 1.190e-32 Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = 1 Query: 1 RSLQVARKTYWFEKFNWFITSENYLVLNGRDAQQNEVVVKKYLRQGDIYVHADLHGASSCVVRNK 195 RSLQVARK YWFEKFNWFI+SENYLV++GR+AQQNEVVVKKYLR GDIYVHADLHGASSCVVRNK Sbjct: 657 RSLQVARKVYWFEKFNWFISSENYLVISGRNAQQNEVVVKKYLRPGDIYVHADLHGASSCVVRNK 721
BLAST of mRNA_H-paniculata_contig1125.800.1 vs. uniprot
Match: A0A8B9GSV1_ASTMX (NFACT-R_1 domain-containing protein n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9GSV1_ASTMX) HSP 1 Score: 109 bits (273), Expect = 1.990e-29 Identity = 47/63 (74.60%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 4 SLQVARKTYWFEKFNWFITSENYLVLNGRDAQQNEVVVKKYLRQGDIYVHADLHGASSCVVRN 192 ++Q ARK YWFEKF WFI+SENYLV+ GRD QQNE++VK+YLR GDIYVHADLHGA+SCV++N Sbjct: 47 TIQKARKVYWFEKFLWFISSENYLVIAGRDQQQNEMIVKRYLRAGDIYVHADLHGATSCVIKN 109
BLAST of mRNA_H-paniculata_contig1125.800.1 vs. uniprot
Match: A0A3Q3KZ28_9LABR (NFACT-R_1 domain-containing protein n=4 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q3KZ28_9LABR) HSP 1 Score: 109 bits (273), Expect = 2.240e-29 Identity = 47/63 (74.60%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 4 SLQVARKTYWFEKFNWFITSENYLVLNGRDAQQNEVVVKKYLRQGDIYVHADLHGASSCVVRN 192 ++Q ARK YWFEKF WFI+SENYLV+ GRD QQNE++VK+YLR GDIYVHADLHGA+SCV++N Sbjct: 59 TIQKARKVYWFEKFLWFISSENYLVIAGRDQQQNEMIVKRYLRAGDIYVHADLHGATSCVIKN 121
BLAST of mRNA_H-paniculata_contig1125.800.1 vs. uniprot
Match: A0A7S1IEK7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IEK7_9EUGL) HSP 1 Score: 117 bits (293), Expect = 5.120e-29 Identity = 49/69 (71.01%), Postives = 63/69 (91.30%), Query Frame = 1 Query: 4 SLQVARKTYWFEKFNWFITSENYLVLNGRDAQQNEVVVKKYLRQGDIYVHADLHGASSCVVRNKVSQSV 210 +++V RK YWFEKFNWFITSEN LV++GRDAQQNE++VK+YLRQGD+YVHADLHGASSC+++N + + V Sbjct: 484 TIKVLRKPYWFEKFNWFITSENLLVISGRDAQQNEILVKRYLRQGDVYVHADLHGASSCIIKNPLGKPV 552
BLAST of mRNA_H-paniculata_contig1125.800.1 vs. uniprot
Match: A0A3Q3JY82_MONAL (NFACT-R_1 domain-containing protein n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q3JY82_MONAL) HSP 1 Score: 108 bits (270), Expect = 6.040e-29 Identity = 45/63 (71.43%), Postives = 56/63 (88.89%), Query Frame = 1 Query: 4 SLQVARKTYWFEKFNWFITSENYLVLNGRDAQQNEVVVKKYLRQGDIYVHADLHGASSCVVRN 192 ++Q ARK YWFEKF WFI+SENYL++ GRD QQNE++VK+Y R GDIYVHADLHGA+SCV++N Sbjct: 59 TIQKARKVYWFEKFLWFISSENYLIIAGRDQQQNEIIVKRYFRAGDIYVHADLHGATSCVIKN 121
BLAST of mRNA_H-paniculata_contig1125.800.1 vs. uniprot
Match: A0A3B4BJB3_9GOBI (Nuclear export mediator factor n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BJB3_9GOBI) HSP 1 Score: 108 bits (269), Expect = 9.890e-29 Identity = 45/63 (71.43%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 4 SLQVARKTYWFEKFNWFITSENYLVLNGRDAQQNEVVVKKYLRQGDIYVHADLHGASSCVVRN 192 ++Q ARK YWFEKF WFI++ENYLV+ GRD QQNE++VK+YLR GD+YVHADLHGA+SCV++N Sbjct: 58 TIQKARKVYWFEKFLWFISAENYLVIAGRDQQQNEMIVKRYLRAGDVYVHADLHGATSCVIKN 120
BLAST of mRNA_H-paniculata_contig1125.800.1 vs. uniprot
Match: A0A7S2T9B4_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2T9B4_9CHLO) HSP 1 Score: 109 bits (272), Expect = 1.240e-28 Identity = 46/63 (73.02%), Postives = 59/63 (93.65%), Query Frame = 1 Query: 10 QVARKTYWFEKFNWFITSENYLVLNGRDAQQNEVVVKKYLRQGDIYVHADLHGASSCVVRNKV 198 +VARK YWFEKF+WF++SENYLV++GRDAQQNE++VK+YL D+YVHAD+HGA+SCVVRN+V Sbjct: 41 KVARKQYWFEKFDWFVSSENYLVVSGRDAQQNELLVKRYLTTHDVYVHADIHGAASCVVRNRV 103
BLAST of mRNA_H-paniculata_contig1125.800.1 vs. uniprot
Match: A0A0S7LM57_9TELE (NEMF (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LM57_9TELE) HSP 1 Score: 110 bits (275), Expect = 1.300e-28 Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 1 Query: 4 SLQVARKTYWFEKFNWFITSENYLVLNGRDAQQNEVVVKKYLRQGDIYVHADLHGASSCVVRNKVSQSV 210 ++Q ARK YWFEKF WFI+SENYLV+ GRD QQNE++VK+YLR GD+YVHADLHGA+SCV++N +V Sbjct: 14 TIQKARKVYWFEKFLWFISSENYLVIAGRDQQQNEMIVKRYLRSGDVYVHADLHGATSCVIKNPSGDAV 82
BLAST of mRNA_H-paniculata_contig1125.800.1 vs. uniprot
Match: A0A3B3QMV0_9TELE (NFACT-R_1 domain-containing protein n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QMV0_9TELE) HSP 1 Score: 109 bits (272), Expect = 1.410e-28 Identity = 46/68 (67.65%), Postives = 58/68 (85.29%), Query Frame = 1 Query: 4 SLQVARKTYWFEKFNWFITSENYLVLNGRDAQQNEVVVKKYLRQGDIYVHADLHGASSCVVRNKVSQS 207 ++Q ARK YWFEKF WFI+SENYL++ GRD QQNE++VK+YL+ GDIYVHADLHGA+SCV++N S Sbjct: 58 TIQKARKVYWFEKFLWFISSENYLIIAGRDQQQNEMIVKRYLKTGDIYVHADLHGATSCVIKNPTGMS 125
BLAST of mRNA_H-paniculata_contig1125.800.1 vs. uniprot
Match: A0A8M9PZY7_DANRE (nuclear export mediator factor Nemf-like n=1 Tax=Danio rerio TaxID=7955 RepID=A0A8M9PZY7_DANRE) HSP 1 Score: 108 bits (271), Expect = 1.660e-28 Identity = 45/63 (71.43%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 4 SLQVARKTYWFEKFNWFITSENYLVLNGRDAQQNEVVVKKYLRQGDIYVHADLHGASSCVVRN 192 S+Q ARK YWFEKF WF++SENYL++ GRD QQNE++VK+YLR GD+YVHADLHGA+SCV++N Sbjct: 82 SIQKARKVYWFEKFLWFLSSENYLIIAGRDQQQNEMIVKRYLRAGDLYVHADLHGATSCVIKN 144 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1125.800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1125.800.1 >prot_H-paniculata_contig1125.800.1 ID=prot_H-paniculata_contig1125.800.1|Name=mRNA_H-paniculata_contig1125.800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp RSLQVARKTYWFEKFNWFITSENYLVLNGRDAQQNEVVVKKYLRQGDIYVback to top mRNA from alignment at H-paniculata_contig1125:28087..28302- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1125.800.1 ID=mRNA_H-paniculata_contig1125.800.1|Name=mRNA_H-paniculata_contig1125.800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=216bp|location=Sequence derived from alignment at H-paniculata_contig1125:28087..28302- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1125:28087..28302- >mRNA_H-paniculata_contig1125.800.1 ID=mRNA_H-paniculata_contig1125.800.1|Name=mRNA_H-paniculata_contig1125.800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=432bp|location=Sequence derived from alignment at H-paniculata_contig1125:28087..28302- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |