mRNA_H-paniculata_contig1125.799.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig1125.799.1 vs. uniprot
Match: D7FK15_ECTSI (2OG-FeII_Oxy_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK15_ECTSI) HSP 1 Score: 166 bits (420), Expect = 2.690e-45 Identity = 104/236 (44.07%), Postives = 115/236 (48.73%), Query Frame = 1 Query: 331 MVILKGFLSVQEQSELAANVHRLGGEQLGGFYSCHNEKTKRMRMMNLGLRTDGGKHSQEIPRGWVDTAVRACRLAAGMDSSIPVLRPDICVVNHYTASSRLGWHQDLVSSRDPGLPVVSLSLVRKKLPTTTRHNVHGSGGLDGQQAIFQYRVSWKKNAAVKSVTLESGDALIFGGRSRGIIHRIPRVGTAVVSPEPGVLGVPDLTAGQLRPGFD--------VPEAGRYNLNFREL 1014 MVILK FLS EQ ELAA+V RLG Q GGFYSCHNEKTKRMRMMNLGL+TDG KH IP W + A+R GQ A FQYR+SWKK+A VKSV LESGDALIFGGRSRGIIH +PR+ TAV +P P T G + VP GR+NLNFREL Sbjct: 1 MVILKSFLSGDEQEELAAHVGRLGALQHGGFYSCHNEKTKRMRMMNLGLKTDGNKHVLPIPPAWTEVALR------------------------------------------------------------------------GQPATFQYRISWKKSAQVKSVRLESGDALIFGGRSRGIIHGVPRIDTAV-APPPXXXXXXXATRSSAAEGAEGRGAGPCVVPGGGRFNLNFREL 163
BLAST of mRNA_H-paniculata_contig1125.799.1 vs. uniprot
Match: A0A7S2SHR7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHR7_9STRA) HSP 1 Score: 168 bits (425), Expect = 4.340e-44 Identity = 94/197 (47.72%), Postives = 118/197 (59.90%), Query Frame = 1 Query: 316 MLRKGMVILKGFLSVQEQSELAANVHRLGGEQLGGFYSCHNEKTKRMRMMNLGLRTDGGKHSQEIPRGWVDTAVRACRLAAGMDSSIPVLR-PDICVVNHYTASSRLGWHQDLVSSRDPGLPVVSLSLVRKKLPTTTRHNVHGSGGLDGQQAIFQYRVSWKKNAAVKSVTLESGDALIFGGRSRGIIHRIPRVGTAV 903 +L KG+V L G + ++Q L +LG GGFY C+NEKTKRM MMNLG R DG H Q IP ++ A A R A+ +DSSIPVL PD+CVVN YT +SRLG H+D VS PGLPVVS+SL G A F YR W K VK +TL SGD L+FGG+SR ++H +PR+ ++V Sbjct: 17 VLPKGVVHLAGHVEPEQQMALIRLAQQLGACAKGGFYWCNNEKTKRMMMMNLGRRPDGKCHPQGIPPEFLAVAREASRSASAVDSSIPVLDDPDVCVVNKYTPASRLGMHEDQVSKGLPGLPVVSISL--------------------GLSAEFCYRRGWGKRYPVKKITLRSGDVLVFGGKSRSLLHAVPRIHSSV 193
BLAST of mRNA_H-paniculata_contig1125.799.1 vs. uniprot
Match: A0A835YUH1_9STRA (Alpha-ketoglutarate-dependent dioxygenase AlkB-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUH1_9STRA) HSP 1 Score: 152 bits (383), Expect = 5.430e-39 Identity = 96/239 (40.17%), Postives = 131/239 (54.81%), Query Frame = 1 Query: 316 MLRKGMVILKGFLSVQEQSELAANVHRLGGEQLGGFYSCHNEKTKRMRMMNLGLRTDGGKHSQ---EIPRGWVDTAVRACRLAAGMDSSIPV--LRP-DICVVNHYTASSRLGWHQDLVSSRDPGLPVVSLSLVRKKLPTTTRHNVHGSGGLDGQQAIFQYRVSWKKNAAVKSVTLESGDALIFGGRSRGIIHRIPRVGTAVVSPEPGVLGVPDLTAGQLRPGFDVPEAGRYNLNFREL 1014 ML++GMV++K FL+ +Q +L V LG GF+ C NEKT+ MRMM+LG R+ H IP W A A AA D+S+ LRP ++CVVNHYT+ S+LGWHQD+++ RD +PVVSLSL G A F ++ S+ K A +SV LESGDAL+FGG+SRG++H + T + P+ + A AGR+N+N REL Sbjct: 38 MLQRGMVLIKAFLNETQQEQLIGEVLSLGQT---GFFQCDNEKTRHMRMMHLG-RSTAPPHKLLPLSIPLSWQQLAEDAVTAAAAADTSLSNKHLRPANVCVVNHYTSCSKLGWHQDMMTKRDCSIPVVSLSL--------------------GDSATFHFKNSYSKKATERSVVLESGDALVFGGQSRGVVHSV----TDIKPPQQPISWQRGSAA----------LAGRFNVNLREL 238
BLAST of mRNA_H-paniculata_contig1125.799.1 vs. uniprot
Match: R0G514_9BRAS (Fe2OG dioxygenase domain-containing protein n=4 Tax=Capsella rubella TaxID=81985 RepID=R0G514_9BRAS) HSP 1 Score: 103 bits (256), Expect = 5.930e-20 Identity = 84/260 (32.31%), Postives = 124/260 (47.69%), Query Frame = 1 Query: 316 MLRKGMVILKGFLSVQEQSELAANVHRLG-GEQLGGFYS--CHNEKTKRMRMMNLGLRTD------------GGKHSQEIPRGW---VDTAVRACRLAAGMDSS-------IPVLRPDICVVNHYTASSRLGWHQDLVSSR---DPGLPVVSLSLVRKKLPTTTRHNVHGSGGLDGQQAIFQYRVSWKKNAAVKSVTLESGDALIFGGRSRGIIHRIPRVGTAVVSPEPGVLGVPDLTAGQLRPGFDVPEAGRYNLNFRE 1011 ++R GMV+LK +LS+ +Q + +LG GE GGFY +E ++MM LG D G + +IP + V+ A++ + A +S+ IP + PDIC+VN YT++ RLG H+D S GLPVVS S+ G A F Y W ++AA +++ LESGD L+FGG+SR ++H + + + P VL + LRPG R NL FR+ Sbjct: 214 VIRPGMVLLKNYLSIDDQVMIVNKCRQLGLGE--GGFYQPGYRDEAKMHLKMMCLGKNWDPETSRYGEVRPIDGSNPPKIPAEFYQFVEKAIKESQSLAASNSNEKRGEVIIPFMSPDICIVNFYTSTGRLGLHRDKDESERSIQKGLPVVSFSI--------------------GDSAEFLYGDQWDEDAA-ETLVLESGDVLLFGGKSRNVLHGVRSI---TKNTAPNVL----VQETSLRPG-------RLNLTFRQ 436
BLAST of mRNA_H-paniculata_contig1125.799.1 vs. uniprot
Match: A0A5N5N665_9ROSI (Fe2OG dioxygenase domain-containing protein n=3 Tax=Salix TaxID=40685 RepID=A0A5N5N665_9ROSI) HSP 1 Score: 102 bits (254), Expect = 7.800e-20 Identity = 90/260 (34.62%), Postives = 116/260 (44.62%), Query Frame = 1 Query: 313 RMLRKGMVILKGFLSVQEQSELAANVHRLGGEQLGGFY--SCHNEKTKRMRMMNLGLRTDGGKHSQE------------IPRGW---VDTAVRACRLAAGMDSSI-------PVLRPDICVVNHYTASSRLGWHQDLVSSRDP---GLPVVSLSLVRKKLPTTTRHNVHGSGGLDGQQAIFQYRVSWKKNAAVKSVTLESGDALIFGGRSRGIIHRIPRVGTAVVSPEPGVLGVPDLTAGQLRPGFDVPEAGRYNLNFRE 1011 R+LR GMV+LK ++SV +Q EL +G GGFY N R++MM LGL D E IPR + V+TA++ G D ++ P + PDIC+VN YT + +LG HQD S + GLPVVS S+ G A F Y N A K + LESGD LIFGG SR I H + V + P L + +LRPG R NL FR+ Sbjct: 181 RVLRPGMVLLKRYISVSDQIELVKTCREIGLGP-GGFYRPGYKNGAKLRLQMMCLGLNWDPETRKYEDQDPTDGCKPPYIPREFNQIVETAIQDAHAVLGKDLALSNVEEILPAMSPDICIVNFYTTTGKLGLHQDRDESSESLSKGLPVVSFSV--------------------GDSAEFLYGDQRDVNKADK-IVLESGDVLIFGGSSRHIFHGVTSV---IPHSSPKAL----IEETRLRPG-------RLNLTFRQ 404
BLAST of mRNA_H-paniculata_contig1125.799.1 vs. uniprot
Match: A0A6M2EQ88_9ROSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Populus davidiana TaxID=266767 RepID=A0A6M2EQ88_9ROSI) HSP 1 Score: 100 bits (249), Expect = 9.590e-20 Identity = 91/259 (35.14%), Postives = 116/259 (44.79%), Query Frame = 1 Query: 316 MLRKGMVILKGFLSVQEQSELAANVHRLGGEQLGGFY--SCHNEKTKRMRMMNLGLRTDGGKHSQE------------IPRGW---VDTAVRACRLAAGMDSSI-------PVLRPDICVVNHYTASSRLGWHQDLVSSR---DPGLPVVSLSLVRKKLPTTTRHNVHGSGGLDGQQAIFQYRVSWKKNAAVKSVTLESGDALIFGGRSRGIIHRIPRVGTAVVSPEPGVLGVPDLTAGQLRPGFDVPEAGRYNLNFRE 1011 +LR GMV+LK ++S+ Q E+ +G GGFY N R++MM LGL D E IPR + V+TA++ G D ++ P + PDIC+VN YT + RLG HQD S D GLPVVS S+ G A F Y N A K V LESGD LIFGG+SR I H G V P+ + + T +LRPG R NL FR+ Sbjct: 87 VLRPGMVLLKRYISLGYQIEMVKTCREIGRGP-GGFYRPGYKNGAKLRLQMMCLGLNWDPETRKYEDQSPADGCKPPCIPRKFNQLVETAIQDAHGLLGKDCALSNVEDMLPAMSPDICIVNFYTTTGRLGLHQDRDESSESLDKGLPVVSFSV--------------------GDSAEFLYGDQRDVNKADK-VVLESGDVLIFGGKSRHIFH-----GVTSVIPDSAPKALIEET--RLRPG-------RLNLTFRQ 309
BLAST of mRNA_H-paniculata_contig1125.799.1 vs. uniprot
Match: A0A1S2YL53_CICAR (uncharacterized protein LOC101502779 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YL53_CICAR) HSP 1 Score: 100 bits (248), Expect = 1.000e-19 Identity = 87/260 (33.46%), Postives = 119/260 (45.77%), Query Frame = 1 Query: 301 TNSSRMLRKGMVILKGFLSVQEQSELAANVHRLG-GEQLGGFYS-CHNEKTK-RMRMMNLGLRTD------------GGKHSQEIPRGWVD---TAVRACRLAAGMDSS--IPVLRPDICVVNHYTASSRLGWHQDLVSSRDP---GLPVVSLSLVRKKLPTTTRHNVHGSGGLDGQQAIFQYRVSWKKNAAVKSVTLESGDALIFGGRSRGIIHRIPRVGTAVVSPEPGVLGVPDLTAGQLRPGFDVPEAGRYNLNFRE 1011 T +LR GMV+LKG++S+++Q ++ + LG G+ GGFY ++E + +++MM LG D G EIP +VD +AV +S IP + PDIC+VN Y + +LG HQD S + GLPVVS S+ G A F Y A K V LESGD LIFGG+SR + H G A + P P L + D+ GR NL FR+ Sbjct: 71 TKERTVLRPGMVLLKGYISIRDQIKIVKVIRELGLGD--GGFYQPSYDEGAELQLKMMCLGKNWDPQTSRYLDQRPCDGSSPPEIPSEFVDLVNSAVHESNSITKPSNSKPIPSISPDICIVNFYAKNGKLGLHQDKDESEESIRKGLPVVSFSI--------------------GDSAEFLYGDE-SNVAKAKKVVLESGDVLIFGGKSRKVFH-----GVASIDPN----SAPSLLVEET----DLRRPGRLNLTFRQ 294
BLAST of mRNA_H-paniculata_contig1125.799.1 vs. uniprot
Match: A0A5C7HQ14_9ROSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HQ14_9ROSI) HSP 1 Score: 97.8 bits (242), Expect = 4.990e-19 Identity = 86/264 (32.58%), Postives = 117/264 (44.32%), Query Frame = 1 Query: 301 TNSSRMLRKGMVILKGFLSVQEQSELAANVHRLGGEQLGGFYS--CHNEKTKRMRMMNLGLRTD------------GGKHSQEIPRGWVDTAVRACR----------LAAGMDSSIPVLRPDICVVNHYTASSRLGWHQDLVS---SRDPGLPVVSLSLVRKKLPTTTRHNVHGSGGLDGQQAIFQYRVSWKKNAAVKSVTLESGDALIFGGRSRGIIHRIPRVGTAVVSPEPGVLGVPDLTAGQLRPGFDVPEAGRYNLNFRE 1011 T S +LR GMV+LK +++V++Q ++ LG + GGFY + R++MM LGL D G IP ++ RA R +A ++ +P + PDIC+VN Y S RLG HQD S GLPVVS S+ G A F Y A K + LESGD LIFGG SR + H + R+ + + P +L + +LRPG R NL FRE Sbjct: 54 TGRSSVLRPGMVVLKRYINVRDQIQIVKTCQELG-KGPGGFYQPGYKSGAKLRLKMMCLGLNWDPETKEYEELRSFDGCEPPAIPYKFLRLVRRAIRDAHSLIEKDLIANNVEEILPAMSPDICIVNFYNTSGRLGLHQDCDETEYSLRKGLPVVSFSV--------------------GDSAEFLYSDERDAENAEK-IVLESGDVLIFGGESRLVFHGVSRI---IPNSAPMLL----MERTRLRPG-------RLNLTFRE 281
BLAST of mRNA_H-paniculata_contig1125.799.1 vs. uniprot
Match: D8TX83_VOLCA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TX83_VOLCA) HSP 1 Score: 96.7 bits (239), Expect = 6.760e-19 Identity = 87/254 (34.25%), Postives = 108/254 (42.52%), Query Frame = 1 Query: 319 LRKGMVILKGFLSVQEQSELAANVHRLGGEQLGGFYSCHNEKTKRM--RMMNLGLRTDGGKHSQEIPRGWVDTA---------VRACRLAAGMDSS---------IPVLRPDICVVNHYTASSRLGWHQD---LVSSRDPGLPVVSLSLVRKKLPTTTRHNVHGSGGLDGQQAIFQYRVSWKKNAAVKSVTLESGDALIFGGRSRGIIHRIPRVGTAVVSPEPGVLGVPDLTAGQLRPGFDVPEAGRYNLNFRE 1011 L G+++LKG+L++ EQ + + LG GGFY+ R+ RMM +GL + E R D A V C G S+ +P LRPDIC+ N Y S RLG HQD + S GLPVVSLSL G A F Y + + A SV LESGD L+FGG R I H + RV P L A LRPG R NL FR+ Sbjct: 25 LPPGVILLKGYLTMDEQIRIVLQIRELGVGP-GGFYTPSYNTGARLSLRMMCMGLHWEPRTSKYEATRSSYDGATPPPIPSWLVELCGRCLGAASAAAAAAGGIQLPPLRPDICLANFYERSGRLGMHQDKDEMPDSLRAGLPVVSLSL--------------------GDAADFLYGRTREAEQA-SSVRLESGDVLVFGGPGRMIFHSVSRV-------HPHTAPRELLAATGLRPG-------RLNLTFRQ 242
BLAST of mRNA_H-paniculata_contig1125.799.1 vs. uniprot
Match: A0A8B8PVH3_9MYRT (uncharacterized protein LOC115746933 isoform X1 n=5 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8PVH3_9MYRT) HSP 1 Score: 100 bits (249), Expect = 6.790e-19 Identity = 86/267 (32.21%), Postives = 123/267 (46.07%), Query Frame = 1 Query: 292 QASTNSSRMLRKGMVILKGFLSVQEQSELAANVHRLGGEQLGGFYS-CHNEKTK-RMRMMNLGLRTD------------GGKHSQEIPRGWVDTAVRACRLA----------AGMDSSIPVLRPDICVVNHYTASSRLGWHQDLVSSRDP---GLPVVSLSLVRKKLPTTTRHNVHGSGGLDGQQAIFQYRVSWKKNAAVKSVTLESGDALIFGGRSRGIIHRIPRVGTAVVSPEPGVLGVPDLTAGQLRPGFDVPEAGRYNLNFRE 1011 Q SR+LR GMV+LK +++++EQ ++ +G GGFY C+ + K R++MM LGL D G + +IP ++ RA A + + + +P + P+IC+VN YT + RLG HQD SR+ GLPVVS S+ G A F +R ++ + V LESGD +IFGG SR + H I V V + P L + LRPG R NL FR+ Sbjct: 256 QLVEQESRVLRPGMVLLKNYVTLREQIDIIRKCREIGIGP-GGFYQPCYQDGAKLRLQMMCLGLDWDPNTRKYERQRRVDGCSAPDIPNEFILAVKRAIGDAKDLVKKGDRRSNLRNDLPTMSPNICIVNFYTTTGRLGLHQDRDESRESLRKGLPVVSFSI--------------------GDSAEFLFR-DYRDADGAERVMLESGDVVIFGGESRMVFHGISSV---VPNSAPKAL----VDKSGLRPG-------RLNLTFRQ 486 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1125.799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1125.799.1 >prot_H-paniculata_contig1125.799.1 ID=prot_H-paniculata_contig1125.799.1|Name=mRNA_H-paniculata_contig1125.799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=279bp MTDVSRKRSRPNNSSASDLNTKFAQDKVNAATAAEDGQASTNSSRMLRKGback to top mRNA from alignment at H-paniculata_contig1125:8731..12300- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1125.799.1 ID=mRNA_H-paniculata_contig1125.799.1|Name=mRNA_H-paniculata_contig1125.799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3570bp|location=Sequence derived from alignment at H-paniculata_contig1125:8731..12300- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1125:8731..12300- >mRNA_H-paniculata_contig1125.799.1 ID=mRNA_H-paniculata_contig1125.799.1|Name=mRNA_H-paniculata_contig1125.799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1674bp|location=Sequence derived from alignment at H-paniculata_contig1125:8731..12300- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |