mRNA_H-paniculata_contig11230.786.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig11230.786.1 vs. uniprot
Match: A0A7S3ZU99_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZU99_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 5.170e-14 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 1 Query: 1 AYSTQSDKVINSGEGGFIVTSDDEVAARAIFLSGAYERRYG 123 AYSTQSDKVINSGEGGFI T DDE+AA+ I+LSG YERRYG Sbjct: 228 AYSTQSDKVINSGEGGFITTDDDEIAAKIIYLSGCYERRYG 268
BLAST of mRNA_H-paniculata_contig11230.786.1 vs. uniprot
Match: A0A7S4E6V5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6V5_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 7.050e-14 Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 1 Query: 1 AYSTQSDKVINSGEGGFIVTSDDEVAARAIFLSGAYERRYG 123 AYSTQSDKVINSGEGGF+ T DDE+AA+ I+LSG YERRYG Sbjct: 225 AYSTQSDKVINSGEGGFVTTDDDEIAAKMIYLSGCYERRYG 265
BLAST of mRNA_H-paniculata_contig11230.786.1 vs. uniprot
Match: A0A8J2WEJ6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEJ6_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 7.270e-14 Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 1 Query: 1 AYSTQSDKVINSGEGGFIVTSDDEVAARAIFLSGAYERRYG 123 AYSTQSDKVINSGEGGF+ T DDE+AA+ I+LSG YERRYG Sbjct: 161 AYSTQSDKVINSGEGGFVTTDDDEIAAKMIYLSGCYERRYG 201
BLAST of mRNA_H-paniculata_contig11230.786.1 vs. uniprot
Match: A0A6H5K4I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I9_9PHAE) HSP 1 Score: 70.5 bits (171), Expect = 4.390e-13 Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 1 Query: 1 AYSTQSDKVINSGEGGFIVTSDDEVAARAIFLSGAYERRY 120 A+STQSDKVINSGEGGF+ TSDDE+AA+AI+LSGAYE RY Sbjct: 131 AFSTQSDKVINSGEGGFVTTSDDEMAAKAIYLSGAYEGRY 170
BLAST of mRNA_H-paniculata_contig11230.786.1 vs. uniprot
Match: K8ECV9_9CHLO (Aminotransferase, DegT/DnrJ/EryC1/StrS family protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8ECV9_9CHLO) HSP 1 Score: 69.7 bits (169), Expect = 8.830e-13 Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 1 Query: 1 AYSTQSDKVINSGEGGFIVTSDDEVAARAIFLSGAYERRY 120 AYSTQSDKVINSGEGGFI T DD++AAR +++SG YERRY Sbjct: 294 AYSTQSDKVINSGEGGFITTDDDDIAARCLYMSGCYERRY 333
BLAST of mRNA_H-paniculata_contig11230.786.1 vs. uniprot
Match: A0A7S3NJM7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJM7_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 6.930e-11 Identity = 29/40 (72.50%), Postives = 36/40 (90.00%), Query Frame = 1 Query: 1 AYSTQSDKVINSGEGGFIVTSDDEVAARAIFLSGAYERRY 120 +YSTQSDKVINSGEGG +VT D ++AA+ I++SGAYERRY Sbjct: 208 SYSTQSDKVINSGEGGLLVTDDAQIAAQLIYMSGAYERRY 247
BLAST of mRNA_H-paniculata_contig11230.786.1 vs. uniprot
Match: A0A7S0J159_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J159_9EUKA) HSP 1 Score: 64.3 bits (155), Expect = 7.000e-11 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 1 Query: 1 AYSTQSDKVINSGEGGFIVTSDDEVAARAIFLSGAYERRY 120 AYSTQSDKVINSGEGGF+ T+D + A+AI+LSG YERRY Sbjct: 286 AYSTQSDKVINSGEGGFLTTNDGGLMAKAIYLSGCYERRY 325
BLAST of mRNA_H-paniculata_contig11230.786.1 vs. uniprot
Match: A0A7S3FD09_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FD09_9VIRI) HSP 1 Score: 63.2 bits (152), Expect = 1.780e-10 Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 1 Query: 4 YSTQSDKVINSGEGGFIVTSDDEVAARAIFLSGAYERRY 120 YSTQSDKVINSGEGGFI T D++AA+AI+ +G YERRY Sbjct: 235 YSTQSDKVINSGEGGFITTDVDDIAAQAIYYTGCYERRY 273
BLAST of mRNA_H-paniculata_contig11230.786.1 vs. uniprot
Match: D7FMY1_ECTSI (Aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY1_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 3.330e-10 Identity = 27/41 (65.85%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 1 AYSTQSDKVINSGEGGFIVTSDDEVAARAIFLSGAYERRYG 123 AYS QSDK+INSGEGGF+ T+D+E+ ++AI++SG YE RYG Sbjct: 227 AYSCQSDKLINSGEGGFLTTNDEELFSKAIYMSGCYEMRYG 267
BLAST of mRNA_H-paniculata_contig11230.786.1 vs. uniprot
Match: A0A7W3N0G5_9ACTN (dTDP-4-amino-4,6-dideoxygalactose transaminase n=2 Tax=Thermomonospora TaxID=2019 RepID=A0A7W3N0G5_9ACTN) HSP 1 Score: 57.4 bits (137), Expect = 1.950e-8 Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 1 Query: 1 AYSTQSDKVINSGEGGFIVTSDDEVAARAIFLSGAYERR 117 A+STQSDK +N+GEGGF+VTSD E ARA+ SGAYE R Sbjct: 202 AFSTQSDKSLNTGEGGFLVTSDPEAYARAVVYSGAYENR 240 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11230.786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11230.786.1 >prot_H-paniculata_contig11230.786.1 ID=prot_H-paniculata_contig11230.786.1|Name=mRNA_H-paniculata_contig11230.786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=43bp AYSTQSDKVINSGEGGFIVTSDDEVAARAIFLSGAYERRYGG*back to top mRNA from alignment at H-paniculata_contig11230:8105..8233+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11230.786.1 ID=mRNA_H-paniculata_contig11230.786.1|Name=mRNA_H-paniculata_contig11230.786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=129bp|location=Sequence derived from alignment at H-paniculata_contig11230:8105..8233+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11230:8105..8233+ >mRNA_H-paniculata_contig11230.786.1 ID=mRNA_H-paniculata_contig11230.786.1|Name=mRNA_H-paniculata_contig11230.786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=258bp|location=Sequence derived from alignment at H-paniculata_contig11230:8105..8233+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |