mRNA_H-paniculata_contig11085.705.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig11085.705.1 vs. uniprot
Match: A0A177UET0_9BASI (Uncharacterized protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177UET0_9BASI) HSP 1 Score: 64.7 bits (156), Expect = 4.970e-9 Identity = 54/174 (31.03%), Postives = 87/174 (50.00%), Query Frame = 1 Query: 1 DFGIRCWNCGKHGHGQWKCREKRKGKRLGGKRRGTSEHAGYAKDQNVALHPVRQRHFMRRWLLDPVACAPRWTESSKSHVHWIIDSGCTGHHLTPQRDLFQTFRQVVRSPIPTAGEGE-LDVKGQGDVEGLIWTVEGAIRIIFCNVFYVPDASDSILSVERMVSQGMEAYFSSE 519 D RC C K GH + CR K + + + +G S+ A YA + R+ H ++ + C + E ++S + +I+DSG T H +T R F F V S + T G+ + V G G V+ + T G I I V YVP+A ++LSV +MV++G++ F+ + Sbjct: 60 DRNARCDYCKKKGHDEDVCRTKERHEE---EDKGVSDRADYA-------YTGRETHSETIYMGQVMLCTDK--EGTRSPLTFIVDSGATEHIVTDLR-WFTEFEPVEESRVVTTDNGDRMPVLGIGAVK--VCTENGEI-ISIDGVTYVPEAVSNLLSVSKMVNEGLKIVFAQD 217
BLAST of mRNA_H-paniculata_contig11085.705.1 vs. uniprot
Match: A0A177SWY1_9BASI (Uncharacterized protein (Fragment) n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177SWY1_9BASI) HSP 1 Score: 63.5 bits (153), Expect = 6.130e-9 Identity = 53/174 (30.46%), Postives = 85/174 (48.85%), Query Frame = 1 Query: 1 DFGIRCWNCGKHGHGQWKCREKRKGKRLGGKRRGTSEHAGYAKDQNVALHPVRQRHFMRRWLLDPVACAPRWTESSKSHVHWIIDSGCTGHHLTPQRDLFQTFRQVVRSPIPTAGEGE-LDVKGQGDVEGLIWTVEGAIRIIFCNVFYVPDASDSILSVERMVSQGMEAYFSSE 519 D RC C K GH + CR K + + + +G S+ A YA + R+ H ++ + C + E ++S + +I+DSG T H +T R F F V S + T G+ + V G G V+ + T G I I+ YVP A ++LSV +MV +G++ F+ + Sbjct: 6 DRNARCDYCKKKGHDEDVCRTKERHEE---EDKGVSDRADYA-------YTGRETHSETIYMGQVMLCTDK--EGTRSLLTFIVDSGATEHIVTDLR-WFTEFEPVEESRVVTTANGDRMPVLGIGAVK--VCTENGEIISIY-GAAYVPGAVSNLLSVSKMVDEGLKVIFAKD 163
BLAST of mRNA_H-paniculata_contig11085.705.1 vs. uniprot
Match: A0A177SY71_9BASI (Uncharacterized protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177SY71_9BASI) HSP 1 Score: 60.1 bits (144), Expect = 1.880e-7 Identity = 52/171 (30.41%), Postives = 82/171 (47.95%), Query Frame = 1 Query: 10 IRCWNCGKHGHGQWKCREKRKGKRLGGKRRGTSEHAGYAKDQNVALHPVRQRHFMRRWLLDPVACAPRWTESSKSHVHWIIDSGCTGHHLTPQRDLFQTFRQVVRSPIPTAGEGE-LDVKGQGDVEGLIWTVEGAIRIIFCNVFYVPDASDSILSVERMVSQGMEAYFSSE 519 RC C K GH + CR K + + + G S+ A YA + R+ H ++ + C + E ++S + +I+DSG T H +T R F F V S + T G+ + V G G V+ + T G I I YVP A ++LSV +MV +G++ F+ + Sbjct: 69 ARCEYCKKKGHDEDGCRTKERHEE---EDNGVSDRADYA-------YTGRETHGETIYMGQVMLCTDK--EGTRSPLTFIVDSGATEHIVTDLR-WFTEFEPVEESRVVTTANGDRMPVLGIGAVK--VCTENGEI-ISINGAAYVPGAVSNLLSVSKMVDEGLKVVFAKD 223
BLAST of mRNA_H-paniculata_contig11085.705.1 vs. uniprot
Match: A0A8H8M0U2_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8M0U2_9AGAM) HSP 1 Score: 58.9 bits (141), Expect = 5.800e-7 Identity = 50/178 (28.09%), Postives = 88/178 (49.44%), Query Frame = 1 Query: 10 IRCWNCGKHGHGQWKCREKRKGK--RLGGKRRGTSEHAGYAKDQNVALHPVRQRHFMRRWLLDPVACAPRW------TESSKSHVHWIIDSGCTGHHLTPQRDLFQTFRQVVRSPIPT-AGEG-ELDVKGQGDVEGLIWTVEGAIRIIFCNV-FYVPDASDSILSVERMVSQGMEAYF 510 I+C+NCGK GH + +CR + G + + + +++ AK + A P + D V P E + +H +W++DSG + H+TPQR+ F T+R +V PIP G+G ++D G G + + +G F + +VPD + S++SV ++ ++ F Sbjct: 247 IKCFNCGKLGHIKVQCRGQGGGAEGKASPQNQQAAKNKEKAKTSDPAPKPESAHIAVTSVATDNVPVMPTLYALPVVDEETAAH-NWLLDSGAS-RHMTPQREWFSTYRNLV-PPIPIRVGDGSKIDAIGIGRIHVTMRNRKGRNTDSFIDAALHVPDLNASLMSVTQLTNKNTNVLF 421
BLAST of mRNA_H-paniculata_contig11085.705.1 vs. uniprot
Match: A0A8H8NI06_9AGAM (Copia-like polyprotein/retrotransposon n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8NI06_9AGAM) HSP 1 Score: 58.9 bits (141), Expect = 6.230e-7 Identity = 50/178 (28.09%), Postives = 88/178 (49.44%), Query Frame = 1 Query: 10 IRCWNCGKHGHGQWKCREKRKGK--RLGGKRRGTSEHAGYAKDQNVALHPVRQRHFMRRWLLDPVACAPRW------TESSKSHVHWIIDSGCTGHHLTPQRDLFQTFRQVVRSPIPT-AGEG-ELDVKGQGDVEGLIWTVEGAIRIIFCNV-FYVPDASDSILSVERMVSQGMEAYF 510 I+C+NCGK GH + +CR + G + + + +++ AK + A P + D V P E + +H +W++DSG + H+TPQR+ F T+R +V PIP G+G ++D G G + + +G F + +VPD + S++SV ++ ++ F Sbjct: 247 IKCFNCGKLGHIKVQCRGQGGGAEGKASPQNQQAAKNKEKAKTSDPAPKPESAHIAVTSVAADNVPVMPTLYALPVVDEETAAH-NWLLDSGAS-RHMTPQREWFSTYRNLV-PPIPIRVGDGSKIDAIGIGRIHVTMRNRKGRNTDSFIDAALHVPDLNASLMSVTQLTNKNTNVLF 421
BLAST of mRNA_H-paniculata_contig11085.705.1 vs. uniprot
Match: A0A8H8M6H5_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8M6H5_9AGAM) HSP 1 Score: 58.9 bits (141), Expect = 6.420e-7 Identity = 50/178 (28.09%), Postives = 88/178 (49.44%), Query Frame = 1 Query: 10 IRCWNCGKHGHGQWKCREKRKGK--RLGGKRRGTSEHAGYAKDQNVALHPVRQRHFMRRWLLDPVACAPRW------TESSKSHVHWIIDSGCTGHHLTPQRDLFQTFRQVVRSPIPT-AGEG-ELDVKGQGDVEGLIWTVEGAIRIIFCNV-FYVPDASDSILSVERMVSQGMEAYF 510 I+C+NCGK GH + +CR + G + + + +++ AK + A P + D V P E + +H +W++DSG + H+TPQR+ F T+R +V PIP G+G ++D G G + + +G F + +VPD + S++SV ++ ++ F Sbjct: 416 IKCFNCGKLGHIKVQCRGQGGGAEGKASPQNQQAAKNKEKAKTSDPAPKPESAHIAVTSVAADNVPVMPTLYALPVVDEETAAH-NWLLDSGAS-RHMTPQREWFSTYRNLV-PPIPIRVGDGSKIDAIGIGRIHVTMRNRKGRNTDSFIDAALHVPDLNASLMSVTQLTNKNTNVLF 590
BLAST of mRNA_H-paniculata_contig11085.705.1 vs. uniprot
Match: UPI00063AEE8E (uncharacterized protein LOC105793376 n=1 Tax=Gossypium raimondii TaxID=29730 RepID=UPI00063AEE8E) HSP 1 Score: 57.8 bits (138), Expect = 8.990e-7 Identity = 37/105 (35.24%), Postives = 54/105 (51.43%), Query Frame = 1 Query: 196 VACAPRWTESSKSHVHWIIDSGCTGHHLTPQRDLFQTFRQVVRSPIPTAGEGELDVKGQGDVEGLIWTVEGAIRIIFCNVFYVPDASDSILSVERMVSQGMEAYF 510 V A + SSK + W+IDSGCT HH+ +F+ S + G GEL +K +G + +I T G I C V YVPD ++LSV +++ +G F Sbjct: 141 VFSASCFASSSKVNKIWLIDSGCT-HHIASDESMFKELDTSFESKVGI-GNGEL-LKARGKGKAVICTKLGIKTI--CEVLYVPDIDQNLLSVGQLLEKGYSLLF 240
BLAST of mRNA_H-paniculata_contig11085.705.1 vs. uniprot
Match: A0A5N4AX79_PHOPY (CCHC-type domain-containing protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A5N4AX79_PHOPY) HSP 1 Score: 57.8 bits (138), Expect = 1.300e-6 Identity = 33/106 (31.13%), Postives = 53/106 (50.00%), Query Frame = 1 Query: 217 TESSKSHVHWIIDSGCTGHHLTPQRDLFQTFRQVVRSPIPTAGEGELDVKGQGDVEGLIWTVEGAIRIIFCN-VFYVPDASDSILSVERMVSQGMEAYFSSERRRL 531 T +S H WI+DSG T H+T R F + + +S I G + VKG+G + + + +R N V Y P+ ++LSV R+V G+ F+ + R + Sbjct: 266 TTNSMHHSGWIVDSGAT-RHITNDRKFFSSLDESYKSVIEVGNGGTVYVKGKGSGKLMFMDSKDNVRRAIANEVLYAPNMVGNVLSVRRLVENGLTIEFNKKFREI 370
BLAST of mRNA_H-paniculata_contig11085.705.1 vs. uniprot
Match: A0A1Y1LME8_PHOPY (CCHC-type domain-containing protein n=8 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1LME8_PHOPY) HSP 1 Score: 57.4 bits (137), Expect = 1.890e-6 Identity = 32/102 (31.37%), Postives = 51/102 (50.00%), Query Frame = 1 Query: 217 TESSKSHVHWIIDSGCTGHHLTPQRDLFQTFRQVVRSPIPTAGEGELDVKGQGDVEGLIWTVEGAIRIIFCN-VFYVPDASDSILSVERMVSQGMEAYFSSE 519 T +S H WI+DSG T H+T R F + + +S I G + VKG+G + + + +R N V Y P+ ++LSV R+V G+ F+ + Sbjct: 265 TTNSMHHSGWIVDSGAT-RHITNDRKFFSSLDESYKSVIEVGNGGTVYVKGKGSGKLMFMDSKDNVRRAIANEVLYAPNMVGNVLSVRRLVENGLTIEFNKK 365
BLAST of mRNA_H-paniculata_contig11085.705.1 vs. uniprot
Match: A0A8H8SJ14_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8SJ14_9AGAM) HSP 1 Score: 57.4 bits (137), Expect = 2.150e-6 Identity = 51/182 (28.02%), Postives = 88/182 (48.35%), Query Frame = 1 Query: 10 IRCWNCGKHGHGQWKCREKRKGKRLGGKRRGTSEHAGYAKDQNVAL------HPVRQRHFMRRWLLDPVACAPRW------TESSKSHVHWIIDSGCTGHHLTPQRDLFQTFRQVVRSPIPT-AGEG-ELDVKGQGDVEGLIWTVEGAIRIIFCNV-FYVPDASDSILSVERMVSQGMEAYF 510 I+C+NCGK GH + +C G+ G + + + ++ AKD+ A P + D V P E + +H +W++DSG + H+TPQR+ F T+R +V PIP G+G ++D G G + + +G F + +VPD + S++SV ++ ++ F Sbjct: 248 IKCFNCGKLGHIKVQCH----GQGGGAEGKASPQNQQAAKDKEKAKTSDSAPKPESAHIAVTSVAADNVPVMPTLYALPVVDEETAAH-NWLLDSGAS-RHMTPQREWFSTYRNLV-PPIPIRVGDGSKIDAIGIGRIHVTMRNRKGRNTNSFIDAALHVPDLNASLMSVTQLTNKNTNVLF 422 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11085.705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11085.705.1 >prot_H-paniculata_contig11085.705.1 ID=prot_H-paniculata_contig11085.705.1|Name=mRNA_H-paniculata_contig11085.705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp DFGIRCWNCGKHGHGQWKCREKRKGKRLGGKRRGTSEHAGYAKDQNVALHback to top mRNA from alignment at H-paniculata_contig11085:3047..3577- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11085.705.1 ID=mRNA_H-paniculata_contig11085.705.1|Name=mRNA_H-paniculata_contig11085.705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=531bp|location=Sequence derived from alignment at H-paniculata_contig11085:3047..3577- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11085:3047..3577- >mRNA_H-paniculata_contig11085.705.1 ID=mRNA_H-paniculata_contig11085.705.1|Name=mRNA_H-paniculata_contig11085.705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1062bp|location=Sequence derived from alignment at H-paniculata_contig11085:3047..3577- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |