Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Ec32 ortholog description | Hypothetical protein |
Ec32 ortholog | Ec-19_000940.1 |
Exons | 2 |
Model size | 2272 |
Cds size | 1743 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11083.703.1 >prot_H-paniculata_contig11083.703.1 ID=prot_H-paniculata_contig11083.703.1|Name=mRNA_H-paniculata_contig11083.703.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=581bp
MEPSTRTKALLEESWTTPWLDGDTFPYWPEAAAMVNLTDFIEWLAVEDKK RAALVLRHAREFEKVHRLVTRELIKSKASGSGISTSNLGNGTSSRRVDRR AITSSLTSSATGAAFDSWASRNGGQHRAGSFLHPRSQNTRGTVGGQALRQ PSGMVDAYFTYRGPRSAGGTLSSRGNTVHGGKGPKQSFRMHDDADHDPVP GRNLSWPSSVGGGIQSLHDKSTASATAKRLTPRPANVAVSVASASSSLHG YRPASVSAVSDCSMLELGLERWAFGSRSGRSRRPTTSRSSSSSAKHALGS DYGYGDRHDRVDLRNVTPDLSPEKKSPLALNMSNGRSTWTNIHAGTAAST LTARTAAARTAAKRADGTGAGMTTAKPARAATSKAKRGRRGSANPRQNFP HNSVHEAVLSRSSPHIPEDAKKAGSDAASSRSHAERRQLPRGGSGGNDCG DYGGPEGARCRRGGDERLDGAPSSCFTDFFASTTPSFHKGSVGIDDSANR REDALQFSGTSSLELQRPKTMRRPPLQQRNRQHGRSPSASLSRNLSDLYG DDEGVVNNAERGAKEALDRSGRRGSSTSLSA back to topmRNA from alignment at H-paniculata_contig11083:4117..6404- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig11083.703.1 ID=mRNA_H-paniculata_contig11083.703.1|Name=mRNA_H-paniculata_contig11083.703.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2288bp|location=Sequence derived from alignment at H-paniculata_contig11083:4117..6404- (Halopteris paniculata Hal_grac_a_UBK monoicous) ACCACTACTACTGCTACTATTACCCGAGGTGGGGGTTCCAGCCTCCACTA
CATGTGCATCTGCTGAGGAAAGGGCTAACCGGTGTTGGAGAAGTTAGAGG
TCTCCTGCGGCGGCAGGGGTACCGTGGGGTACACCGTCATCCCACGAAAT
GTTCTGCTGCGGCAACGCAGCTTCTGTGTGTGACAACTCCCCCAGCCGAG
CAGCTGAAGTGGGGCATTTGCGTTGCGCCTGTTGATTGCAAGCTATATAC
CGCCCACAGTGCTTGTGCTCGCCTTGTACAACACGGATATAAATCAATTC
TTGAGGCAAGTGTTGGGGCAAGCGTGCTGCCAGCGCGTGCTACCCAGCCT
CAACTGGGCAACGAGCTTTGCCTGTTGGGTTTTGCATCTGCTTCCGTCAA
CCTGTTTGCGGCTTCATCAAGGCCGCCTGTATACCAATATCTCCTTCCTA
TTTCAAAGCTCTACGTTTTGTACGGACGGACTTCGTGGGTCTGCACTTGT
GACGCTGCCTGAAAGCAAGTCCCGGGCATGGAGCCGAGCACCCGAACCAA
AGCTCTGTTAGAAGAATCATGGACGACGCCGTGGTTAGACGGTGATACCT
TCCCGTATTGGCCGGAGGCCGCGGCCATGGTCAACCTCACGGACTTCATA
GAATGGCTCGCTGTCGAGGATAAAAAGAGAGCAGCTCTCGTGCTCAGGCA
CGCGCGCGAATTTGAGAAAGTCCACCGACTGGTAACTCGAGAACTCATCA
AATCCAAGGCCAGTGGCAGCGGTATATCTACCAGCAACTTGGGCAATGGA
ACCTCGAGCCGTCGTGTTGATCGTCGTGCAATCACCTCTTCTTTGACATC
CTCTGCCACGGGAGCAGCATTTGATTCTTGGGCTTCGCGCAATGGAGGGC
AGCACCGAGCGGGTAGCTTCCTTCATCCTCGCTCGCAAAACACCAGAGGT
ACAGTTGGCGGGCAGGCTCTTCGACAGCCAAGTGGCATGGTTGACGCATA
TTTCACTTATCGGGGCCCGCGCAGCGCGGGTGGCACTCTGTCTAGCAGGG
GCAACACTGTTCATGGGGGCAAAGGGCCAAAACAATCATTCCGGATGCAC
GACGATGCCGACCACGATCCCGTCCCAGGCAGGAATCTGTCATGGCCCTC
ATCAGTCGGCGGAGGGATTCAAAGGCGCAGTAGCAGTAACAGCTTGCACG
ACAAATCGACCGCTTCTGCAACTGCGAAAAGACTGACACCACGGCCCGCC
AATGTTGCGGTTAGTGTGGCTTCTGCTTCTTCGTCTCTGCATGGATATCG
TCCCGCCTCCGTGAGTGCTGTATCTGACTGTTCAATGCTCGAGCTAGGCC
TCGAACGGTGGGCTTTCGGCAGTCGCTCCGGCCGCTCTCGCCGCCCCACC
ACCAGCCGCTCCAGCAGTAGCAGCGCGAAACATGCACTAGGCTCTGATTA
TGGTTACGGCGATCGCCACGACCGGGTGGACCTCCGAAACGTTACGCCCG
ATCTTTCTCCCGAAAAGAAATCCCCCCTTGCCTTAAACATGAGCAATGGG
AGGTCAACGTGGACGAACATCCATGCTGGGACCGCTGCATCAACACTTAC
CGCGAGAACAGCAGCTGCTAGGACGGCGGCGAAACGAGCTGATGGGACGG
GCGCGGGGATGACGACAGCAAAGCCGGCGCGTGCTGCGACTAGCAAAGCG
AAACGCGGACGTCGCGGCAGCGCAAACCCTCGCCAAAACTTTCCCCACAA
CTCGGTCCATGAAGCTGTGCTCTCGCGATCGTCACCGCACATACCGGAAG
ATGCGAAAAAAGCCGGTAGTGATGCTGCTAGTTCGCGATCGCATGCAGAG
CGGCGACAGCTACCGCGCGGCGGCAGCGGGGGCAATGATTGCGGCGACTA
TGGCGGTCCTGAGGGCGCTAGATGCCGGCGGGGTGGAGATGAGAGGTTGG
ATGGGGCGCCATCGTCTTGCTTCACCGACTTTTTCGCGTCCACAACGCCA
TCGTTTCACAAGGGCAGCGTCGGCATTGACGACTCGGCCAACCGGCGTGA
AGACGCTTTGCAGTTCTCGGGGACATCATCTCTCGAACTTCAGCGGCCGA
AAACAATGCGCCGTCCGCCTCTGCAGCAGCGAAACCGGCAGCATGGCCGG
AGTCCCAGCGCCTCCCTCTCTCGCAACCTTTCCGACCTATACGGAGATGA
TGAAGGGGTCGTAAACAACGCCGAAAGGGGAGCGAAGGAGGCGCTGGATC
GCAGCGGGCGGCGTGGTAGCAGTACGTCGTTGTCGGCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig11083:4117..6404- >mRNA_H-paniculata_contig11083.703.1 ID=mRNA_H-paniculata_contig11083.703.1|Name=mRNA_H-paniculata_contig11083.703.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3486bp|location=Sequence derived from alignment at H-paniculata_contig11083:4117..6404- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGGAGCCGAGCACCCGAACCAAAGCTCTGTTAGAAGAATCATGGACGAC GCCGTGGTTAGACGGTGATACCTTCCCGTATTGGCCGGAGGCCGCGGCCA TGGTCAACCTCACGGACTTCATAGAATGGCTCGCTGTCGAGGATAAAAAG AGAGCAGCTCTCGTGCTCAGGCACGCGCGCGAATTTGAGAAAGTCCACCG ACTGGTAACTCGAGAACTCATCAAATCCAAGGCCAGTGGCAGCGGTATAT CTACCAGCAACTTGGGCAATGGAACCTCGAGCCGTCGTGTTGATCGTCGT GCAATCACCTCTTCTTTGACATCCTCTGCCACGGGAGCAGCATTTGATTC TTGGGCTTCGCGCAATGGAGGGCAGCACCGAGCGGGTAGCTTCCTTCATC CTCGCTCGCAAAACACCAGAGGTACAGTTGGCGGGCAGGCTCTTCGACAG CCAAGTGGCATGGTTGACGCATATTTCACTTATCGGGGCCCGCGCAGCGC GGGTGGCACTCTGTCTAGCAGGGGCAACACTGTTCATGGGGGCAAAGGGC CAAAACAATCATTCCGGATGCACGACGATGCCGACCACGATCCCGTCCCA GGCAGGAATCTGTCATGGCCCTCATCAGTCGGCGGAGGGATTCAAAGATG GAGCCGAGCACCCGAACCAAAGCTCTGTTAGAAGAATCATGGACGACGCC GTGGTTAGACGGTGATACCTTCCCGTATTGGCCGGAGGCCGCGGCCATGG TCAACCTCACGGACTTCATAGAATGGCTCGCTGTCGAGGATAAAAAGAGA GCAGCTCTCGTGCTCAGGCACGCGCGCGAATTTGAGAAAGTCCACCGACT GGTAACTCGAGAACTCATCAAATCCAAGGCCAGTGGCAGCGGTATATCTA CCAGCAACTTGGGCAATGGAACCTCGAGCCGTCGTGTTGATCGTCGTGCA ATCACCTCTTCTTTGACATCCTCTGCCACGGGAGCAGCATTTGATTCTTG GGCTTCGCGCAATGGAGGGCAGCACCGAGCGGGTAGCTTCCTTCATCCTC GCTCGCAAAACACCAGAGGTACAGTTGGCGGGCAGGCTCTTCGACAGCCA AGTGGCATGGTTGACGCATATTTCACTTATCGGGGCCCGCGCAGCGCGGG TGGCACTCTGTCTAGCAGGGGCAACACTGTTCATGGGGGCAAAGGGCCAA AACAATCATTCCGGATGCACGACGATGCCGACCACGATCCCGTCCCAGGC AGGAATCTGTCATGGCCCTCATCAGTCGGCGGAGGGATTCAAAGCTTGCA CGACAAATCGACCGCTTCTGCAACTGCGAAAAGACTGACACCACGGCCCG CCAATGTTGCGGTTAGTGTGGCTTCTGCTTCTTCGTCTCTGCATGGATAT CGTCCCGCCTCCGTGAGTGCTGTATCTGACTGTTCAATGCTCGAGCTAGG CCTCGAACGGTGGGCTTTCGGCAGTCGCTCCGGCCGCTCTCGCCGCCCCA CCACCAGCCGCTCCAGCAGTAGCAGCGCGAAACATGCACTAGGCTCTGAT TATGGTTACGGCGATCGCCACGACCGGGTGGACCTCCGAAACGTTACGCC CGATCTTTCTCCCGAAAAGAAATCCCCCCTTGCCTTAAACATGAGCAATG GGAGGTCAACGTGGACGAACATCCATGCTGGGACCGCTGCATCAACACTT ACCGCGAGAACAGCAGCTGCTAGGACGGCGGCGAAACGAGCTGATGGGAC GGGCGCGGGGATGACGACAGCAAAGCCGGCGCGTGCTGCGACTAGCAAAG CGAAACGCGGACGTCGCGGCAGCGCAAACCCTCGCCAAAACTTTCCCCAC AACTCGGTCCATGAAGCTGTGCTCTCGCGATCGTCACCGCACATACCGGA AGATGCGAAAAAAGCCGGTAGTGATGCTGCTAGTTCGCGATCGCATGCAG AGCGGCGACAGCTACCGCGCGGCGGCAGCGGGGGCAATGATTGCGGCGAC TATGGCGGTCCTGAGGGCGCTAGATGCCGGCGGGGTGGAGATGAGAGGTT GGATGGGGCGCCATCGTCTTGCTTCACCGACTTTTTCGCGTCCACAACGC CATCGTTTCACAAGGGCAGCGTCGGCATTGACGACTCGGCCAACCGGCGT GAAGACGCTTTGCAGTTCTCGGGGACATCATCTCTCGAACTTCAGCGGCC GAAAACAATGCGCCGTCCGCCTCTGCAGCAGCGAAACCGGCAGCATGGCC GGAGTCCCAGCGCCTCCCTCTCTCGCAACCTTTCCGACCTATACGGAGAT GATGAAGGGGTCGTAAACAACGCCGAAAGGGGAGCGAAGGAGGCGCTGGA TCGCAGCGGGCGGCGTGGTAGCAGTACGTCGTTGTCGGCACTTGCACGAC AAATCGACCGCTTCTGCAACTGCGAAAAGACTGACACCACGGCCCGCCAA TGTTGCGGTTAGTGTGGCTTCTGCTTCTTCGTCTCTGCATGGATATCGTC CCGCCTCCGTGAGTGCTGTATCTGACTGTTCAATGCTCGAGCTAGGCCTC GAACGGTGGGCTTTCGGCAGTCGCTCCGGCCGCTCTCGCCGCCCCACCAC CAGCCGCTCCAGCAGTAGCAGCGCGAAACATGCACTAGGCTCTGATTATG GTTACGGCGATCGCCACGACCGGGTGGACCTCCGAAACGTTACGCCCGAT CTTTCTCCCGAAAAGAAATCCCCCCTTGCCTTAAACATGAGCAATGGGAG GTCAACGTGGACGAACATCCATGCTGGGACCGCTGCATCAACACTTACCG CGAGAACAGCAGCTGCTAGGACGGCGGCGAAACGAGCTGATGGGACGGGC GCGGGGATGACGACAGCAAAGCCGGCGCGTGCTGCGACTAGCAAAGCGAA ACGCGGACGTCGCGGCAGCGCAAACCCTCGCCAAAACTTTCCCCACAACT CGGTCCATGAAGCTGTGCTCTCGCGATCGTCACCGCACATACCGGAAGAT GCGAAAAAAGCCGGTAGTGATGCTGCTAGTTCGCGATCGCATGCAGAGCG GCGACAGCTACCGCGCGGCGGCAGCGGGGGCAATGATTGCGGCGACTATG GCGGTCCTGAGGGCGCTAGATGCCGGCGGGGTGGAGATGAGAGGTTGGAT GGGGCGCCATCGTCTTGCTTCACCGACTTTTTCGCGTCCACAACGCCATC GTTTCACAAGGGCAGCGTCGGCATTGACGACTCGGCCAACCGGCGTGAAG ACGCTTTGCAGTTCTCGGGGACATCATCTCTCGAACTTCAGCGGCCGAAA ACAATGCGCCGTCCGCCTCTGCAGCAGCGAAACCGGCAGCATGGCCGGAG TCCCAGCGCCTCCCTCTCTCGCAACCTTTCCGACCTATACGGAGATGATG AAGGGGTCGTAAACAACGCCGAAAGGGGAGCGAAGGAGGCGCTGGATCGC AGCGGGCGGCGTGGTAGCAGTACGTCGTTGTCGGCA back to top
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