Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 3 |
Model size | 2204 |
Cds size | 2130 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1108.700.1 >prot_H-paniculata_contig1108.700.1 ID=prot_H-paniculata_contig1108.700.1|Name=mRNA_H-paniculata_contig1108.700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=710bp
MSESDRNEMGPVGGSGDDDEEDDDILVGLTDDCTKHVSEGALEGKWNRKR QLEMDILEAKEWVKGQVSCLPPLLGDTEIDDGSHPSSAGDPHGDHHATGD GPGGRDSVEGACSGGGVVPILELAAGAAAADNSGGGSKRRVKSSSGPMRS RRQCVEFTCPAFPRWGNSSRDVFGCDKHKLLGMVDLRRRTCEAPGCGKGA GFGFEGDTTRFCSLHKEAGMVNFRGKRCESRGCRRHPLYGHEGRGRQFCK SHRVEGMIYKVGNNCQVAGCSRPARFGMVGEEVKSCVEHKTDDMVDAHHR FCEAPQCKVTPSFGFEGGKARFCQAHKQEMMVNVSQRRCEHEKCHRQPLW GWPVEQRARMCGAHKAPGMDNIHVKRCEAVECRKQPNFGNPADRVRRFCK DHKTLVCVNVSTKPCEYPGCGATARCGYDDQAAVFCRVHRAEGMRVVQRR VCRELGCDKMPSYGFEADRKRLYCAQHRLHGMTSLARKCQRDGCQTEPQF NCPGIRSPKFCLKHKDDGMMDVVSRKCQMERCMKRPWYSYDGARPVLCAE HKAPGMIGYRPAQRDVNCRAGAGEGANIAGIDGGVEAVGSMIDGGVGGGE EGFVESGRKRTYADMGMLDSDHSSNVHEQQQHHHHDSHHPSDAIGGGEHC VGGGDTGVGGGEPDLVVSEGLHTVGLEAMGMGEVEVGLEDVRALELDDIS GGVLEPSRME back to topmRNA from alignment at H-paniculata_contig1108:21324..24428- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1108.700.1 ID=mRNA_H-paniculata_contig1108.700.1|Name=mRNA_H-paniculata_contig1108.700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3105bp|location=Sequence derived from alignment at H-paniculata_contig1108:21324..24428- (Halopteris paniculata Hal_grac_a_UBK monoicous) CGCTGGTTCGTCGTGACATCTCCGCGCGCCGAGCAGGCACTGAGAAGACA
AGGGATGCTGAGACAAACAGCAGATGTCAGAGTCAGACCGAAATGAGATG
GGGCCGGTGGGCGGGAGTGGAGACGATGATGAGGAAGATGATGATATACT
GGTCGGTCTGACCGACGACTGTACCAAGCACGTGTCTGAGGGTGCCCTTG
AGGGTAAATGGAACAGGAAGAGGCAGCTGGAGATGGACATCCTCGAGGCC
AAGGAGTGGGTAAAAGGGCAGGTCTCTTGCCTGCCTCCCCTGTTGGGTGA
CACAGAAATTGACGACGGGAGTCATCCCAGCAGCGCGGGCGACCCACATG
GAGATCATCATGCCACGGGTGATGGGCCCGGCGGCCGCGATTCGGTCGAA
GGCGCTTGTTCAGGCGGCGGTGTTGTACCGATCCTCGAGCTCGCAGCGGG
GGCGGCGGCGGCGGACAACAGTGGAGGCGGCAGCAAGAGAAGAGTAAAAT
CGTCCTCGGGACCCATGCGATCGCGGAGGCAGTGCGTGGAGTTCACGTGC
CCCGCGTTTCCACGCTGGGGTAATTCGTCTCGAGACGTGTTTGGGTGTGA
CAAGCACAAGCTGTTGGGTATGGTGGATTTGAGGCGGCGGACCTGCGAAG
CCCCAGGGTGTGGGAAAGGTGCCGGCTTCGGGTTCGAGGGGGATACGACG
CGTTTTTGCTCGCTCCATAAGGAGGCGGGCATGGTGAACTTCAGAGGAAA
GCGTTGCGAGTCGCGCGGATGCCGGAGGCATCCTCTGTATGGGCACGAGG
GCAGAGGACGGCAGTTTTGCAAAAGCCATCGGGTGGAAGGTATGATATAC
AAGGTCGGGAACAACTGTCAGGTGGCAGGGTGCTCGCGGCCCGCACGCTT
TGGCATGGTCGGCGAAGAAGTGAAGTCCTGCGTTGAGCACAAGACGGATG
ACATGGTAGACGCGCACCACCGTTTTTGCGAGGCGCCACAATGCAAGGTG
CCTACACTACTGTAACTATATCTACTGTATAGTACAGAGATAGAATTAGG
CTGCGTCGGTGAAGGAGTACTCATCGTACAAATACCCGTTAAGGCTTTGC
AACACTTACGTTCTCTGTGGCGGTATTTTTGGTATTTCATGCTTCGATAC
GACTGCAAAAAAATCAGCCTTGCTGCGCGATTGCCTTTGTTTGAAAACTG
GGCTGTCCTTATGAAGCCTAACTTGTGGTCCTGCGATGGACTTGTACTGG
ATTGCGGCGCTACTTTACCTCAACTAAAGAATGTATATCCTTGAAGCAGC
ATAACATTGGAATATGGAGAGCGCGACCGGGTAGCTCTTCGCTTCGCGAT
TACCAAGAGAAAATAAACTACTGCATGTTCGTTTTGTTTTGCCTTTCTTT
TCGTTTCCGGTCGGAAAACTAAAAATCGTTCGTCGCCAATTAGGTGACTC
CAAGCTTTGGCTTCGAGGGAGGAAAGGCGCGCTTCTGCCAGGCCCACAAG
CAAGAAATGATGGTCAACGTTTCCCAGCGCCGCTGCGAGCACGAGAAGTG
CCACCGTCAGCCGCTTTGGGGCTGGCCCGTAGAACAGCGAGCGCGAATGT
GCGGGGCGCACAAAGCCCCCGGCATGGACAACATCCACGTCAAACGATGC
GAGGCGGTCGAGTGTCGGAAGCAACCAAACTTTGGGAATCCGGCGGATCG
CGTGCGGCGCTTTTGCAAAGACCACAAGACACTGGTCTGTGTCAATGTGT
CCACAAAGCCGTGCGAGTATCCCGGTTGCGGCGCCACTGCGCGTTGCGGG
TACGACGACCAGGCGGCTGTCTTCTGCCGGGTGCACCGAGCCGAGGGTAT
GCGCGTGGTCCAGCGGAGGGTATGCCGCGAGCTTGGGTGCGACAAGATGC
CTAGCTACGGTTTCGAAGCGGACCGCAAGAGACTCTATTGCGCACAGCAC
CGCCTCCACGGAATGACTAGCCTGGCTCGTAAGTGTCAGAGGGACGGCTG
CCAGACAGAGCCTCAGTTCAACTGTCCTGGTATACGGTCACCGAAGTTTT
GCCTGGTGAGTGGAATGGAAACTGCAAATATTTTGAGGCACTCACACTGC
TTTCTCTACTTCCCCGTTCTTATCCCGGACCTGCGCTGTGCGATTATACT
TATTATCTCTCTCACATGGCGTCACGACTCGTGTCGCGTAATGGCTTTAC
TGCGTCCAAGGGAGTCTTACCTTTCCCGCATCCCGTGCTGTAGGGGTTGG
GTTTGCTCCATCCTCGTCACCTACTCCAAATGTTGTAGCGACGCCCTGAC
GAGATGAAGTGGCACCTAACATTTACCGTGGGGACATATCCATGCGCAGT
ACGATGTGCCACCATTTGATTCTACAAAACCTCGCTGTCCTTACCCTTAA
TCGAAACCGACTCTAACTGATCTCATATCGAAATCTTGGCTTTGCGATTC
CCGCGCCTCTTGTCACCGCTTTGCTTCCTATTCACAATCTCACGATGCCT
GCGGATCGTAGAAGCACAAAGATGACGGAATGATGGACGTGGTGTCCCGC
AAGTGCCAGATGGAAAGATGCATGAAGCGCCCGTGGTACAGCTACGATGG
CGCACGGCCCGTCCTCTGCGCGGAGCACAAGGCGCCCGGGATGATCGGGT
ACCGGCCAGCCCAAAGAGATGTGAACTGCCGAGCGGGCGCAGGAGAGGGG
GCCAACATAGCCGGTATTGACGGCGGTGTGGAAGCTGTAGGATCCATGAT
AGATGGTGGCGTTGGCGGCGGTGAGGAAGGGTTTGTGGAGTCAGGTCGCA
AACGAACATATGCAGATATGGGCATGCTCGACAGTGACCACAGCAGCAAC
GTTCATGAACAGCAGCAGCACCATCATCATGATTCCCATCACCCAAGTGA
TGCTATTGGTGGCGGCGAGCACTGTGTAGGTGGCGGTGATACAGGTGTCG
GAGGCGGCGAACCGGACTTGGTTGTTTCCGAAGGTCTACACACCGTGGGC
CTGGAGGCGATGGGCATGGGTGAGGTTGAAGTAGGACTTGAAGACGTCAG
GGCCCTAGAGCTGGACGATATAAGCGGAGGGGTTTTGGAACCGTCGAGGA
TGGAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1108:21324..24428- >mRNA_H-paniculata_contig1108.700.1 ID=mRNA_H-paniculata_contig1108.700.1|Name=mRNA_H-paniculata_contig1108.700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4260bp|location=Sequence derived from alignment at H-paniculata_contig1108:21324..24428- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGTCAGAGTCAGACCGAAATGAGATGGGGCCGGTGGGCGGGAGTGGAGA CGATGATGAGGAAGATGATGATATACTGGTCGGTCTGACCGACGACTGTA CCAAGCACGTGTCTGAGGGTGCCCTTGAGGGTAAATGGAACAGGAAGAGG CAGCTGGAGATGGACATCCTCGAGGCCAAGGAGTGGGTAAAAGGGCAGGT CTCTTGCCTGCCTCCCCTGTTGGGTGACACAGAAATTGACGACGGGAGTC ATCCCAGCAGCGCGGGCGACCCACATGGAGATCATCATGCCACGGGTGAT GGGCCCGGCGGCCGCGATTCGGTCGAAGGCGCTTGTTCAGGCGGCGGTGT TGTACCGATCCTCGAGCTCGCAGCGGGGGCGGCGGCGGCGGACAACAGTG GAGGCGGCAGCAAGAGAAGAGTAAAATCGTCCTCGGGACCCATGCGATCG CGGAGGCAGTGCGTGGAGTTCACGTGCCCCGCGTTTCCACGCTGGGGTAA TTCGTCTCGAGACGTGTTTGGGTGTGACAAGCACAAGCTGTTGGGTATGG TGGATTTGAGGCGGCGGACCTGCGAAGCCCCAGGGTGTGGGAAAGGTGCC GGCTTCGGGTTCGAGGGGGATACGACGCGTTTTTGCTCGCTCCATAAGGA GGCGGGCATGGTGAACTTCAGAGGAAAGCGTTGCGAGTCGCGCGGATGCC GGAGGCATCCTCTGTATGGGCACGAGGGCAGAGGACGGCAGTTTTGCAAA AGCCATCGGGTGGAAGGTATGATATACAAGGTCGGGAACAACTGTCAGGT GGCAGGGTGCTCGCGGCCCGCACGCTTTGGCATGGTCGGCGAAGAAGTGA AGTCCTGCGTTGAGCACAAGACGGATGACATGGTAGACGCGCACCACCGT TTTTGCGAGGCGCCACAATGCAAGATGTCAGAGTCAGACCGAAATGAGAT GGGGCCGGTGGGCGGGAGTGGAGACGATGATGAGGAAGATGATGATATAC TGGTCGGTCTGACCGACGACTGTACCAAGCACGTGTCTGAGGGTGCCCTT GAGGGTAAATGGAACAGGAAGAGGCAGCTGGAGATGGACATCCTCGAGGC CAAGGAGTGGGTAAAAGGGCAGGTCTCTTGCCTGCCTCCCCTGTTGGGTG ACACAGAAATTGACGACGGGAGTCATCCCAGCAGCGCGGGCGACCCACAT GGAGATCATCATGCCACGGGTGATGGGCCCGGCGGCCGCGATTCGGTCGA AGGCGCTTGTTCAGGCGGCGGTGTTGTACCGATCCTCGAGCTCGCAGCGG GGGCGGCGGCGGCGGACAACAGTGGAGGCGGCAGCAAGAGAAGAGTAAAA TCGTCCTCGGGACCCATGCGATCGCGGAGGCAGTGCGTGGAGTTCACGTG CCCCGCGTTTCCACGCTGGGGTAATTCGTCTCGAGACGTGTTTGGGTGTG ACAAGCACAAGCTGTTGGGTATGGTGGATTTGAGGCGGCGGACCTGCGAA GCCCCAGGGTGTGGGAAAGGTGCCGGCTTCGGGTTCGAGGGGGATACGAC GCGTTTTTGCTCGCTCCATAAGGAGGCGGGCATGGTGAACTTCAGAGGAA AGCGTTGCGAGTCGCGCGGATGCCGGAGGCATCCTCTGTATGGGCACGAG GGCAGAGGACGGCAGTTTTGCAAAAGCCATCGGGTGGAAGGTATGATATA CAAGGTCGGGAACAACTGTCAGGTGGCAGGGTGCTCGCGGCCCGCACGCT TTGGCATGGTCGGCGAAGAAGTGAAGTCCTGCGTTGAGCACAAGACGGAT GACATGGTAGACGCGCACCACCGTTTTTGCGAGGCGCCACAATGCAAGGT GACTCCAAGCTTTGGCTTCGAGGGAGGAAAGGCGCGCTTCTGCCAGGCCC ACAAGCAAGAAATGATGGTCAACGTTTCCCAGCGCCGCTGCGAGCACGAG AAGTGCCACCGTCAGCCGCTTTGGGGCTGGCCCGTAGAACAGCGAGCGCG AATGTGCGGGGCGCACAAAGCCCCCGGCATGGACAACATCCACGTCAAAC GATGCGAGGCGGTCGAGTGTCGGAAGCAACCAAACTTTGGGAATCCGGCG GATCGCGTGCGGCGCTTTTGCAAAGACCACAAGACACTGGTCTGTGTCAA TGTGTCCACAAAGCCGTGCGAGTATCCCGGTTGCGGCGCCACTGCGCGTT GCGGGTACGACGACCAGGCGGCTGTCTTCTGCCGGGTGCACCGAGCCGAG GGTATGCGCGTGGTCCAGCGGAGGGTATGCCGCGAGCTTGGGTGCGACAA GATGCCTAGCTACGGTTTCGAAGCGGACCGCAAGAGACTCTATTGCGCAC AGCACCGCCTCCACGGAATGACTAGCCTGGCTCGTAAGTGTCAGAGGGAC GGCTGCCAGACAGAGCCTCAGTTCAACTGTCCTGGTATACGGTCACCGAA GTTTTGCCTGGTGACTCCAAGCTTTGGCTTCGAGGGAGGAAAGGCGCGCT TCTGCCAGGCCCACAAGCAAGAAATGATGGTCAACGTTTCCCAGCGCCGC TGCGAGCACGAGAAGTGCCACCGTCAGCCGCTTTGGGGCTGGCCCGTAGA ACAGCGAGCGCGAATGTGCGGGGCGCACAAAGCCCCCGGCATGGACAACA TCCACGTCAAACGATGCGAGGCGGTCGAGTGTCGGAAGCAACCAAACTTT GGGAATCCGGCGGATCGCGTGCGGCGCTTTTGCAAAGACCACAAGACACT GGTCTGTGTCAATGTGTCCACAAAGCCGTGCGAGTATCCCGGTTGCGGCG CCACTGCGCGTTGCGGGTACGACGACCAGGCGGCTGTCTTCTGCCGGGTG CACCGAGCCGAGGGTATGCGCGTGGTCCAGCGGAGGGTATGCCGCGAGCT TGGGTGCGACAAGATGCCTAGCTACGGTTTCGAAGCGGACCGCAAGAGAC TCTATTGCGCACAGCACCGCCTCCACGGAATGACTAGCCTGGCTCGTAAG TGTCAGAGGGACGGCTGCCAGACAGAGCCTCAGTTCAACTGTCCTGGTAT ACGGTCACCGAAGTTTTGCCTGAAGCACAAAGATGACGGAATGATGGACG TGGTGTCCCGCAAGTGCCAGATGGAAAGATGCATGAAGCGCCCGTGGTAC AGCTACGATGGCGCACGGCCCGTCCTCTGCGCGGAGCACAAGGCGCCCGG GATGATCGGGTACCGGCCAGCCCAAAGAGATGTGAACTGCCGAGCGGGCG CAGGAGAGGGGGCCAACATAGCCGGTATTGACGGCGGTGTGGAAGCTGTA GGATCCATGATAGATGGTGGCGTTGGCGGCGGTGAGGAAGGGTTTGTGGA GTCAGGTCGCAAACGAACATATGCAGATATGGGCATGCTCGACAGTGACC ACAGCAGCAACGTTCATGAACAGCAGCAGCACCATCATCATGATTCCCAT CACCCAAGTGATGCTATTGGTGGCGGCGAGCACTGTGTAGGTGGCGGTGA TACAGGTGTCGGAGGCGGCGAACCGGACTTGGTTGTTTCCGAAGGTCTAC ACACCGTGGGCCTGGAGGCGATGGGCATGGGTGAGGTTGAAGTAGGACTT GAAGACGTCAGGGCCCTAGAGCTGGACGATATAAGCGGAGGGGTTTTGGA ACCGTCGAGGATGGAGAAGCACAAAGATGACGGAATGATGGACGTGGTGT CCCGCAAGTGCCAGATGGAAAGATGCATGAAGCGCCCGTGGTACAGCTAC GATGGCGCACGGCCCGTCCTCTGCGCGGAGCACAAGGCGCCCGGGATGAT CGGGTACCGGCCAGCCCAAAGAGATGTGAACTGCCGAGCGGGCGCAGGAG AGGGGGCCAACATAGCCGGTATTGACGGCGGTGTGGAAGCTGTAGGATCC ATGATAGATGGTGGCGTTGGCGGCGGTGAGGAAGGGTTTGTGGAGTCAGG TCGCAAACGAACATATGCAGATATGGGCATGCTCGACAGTGACCACAGCA GCAACGTTCATGAACAGCAGCAGCACCATCATCATGATTCCCATCACCCA AGTGATGCTATTGGTGGCGGCGAGCACTGTGTAGGTGGCGGTGATACAGG TGTCGGAGGCGGCGAACCGGACTTGGTTGTTTCCGAAGGTCTACACACCG TGGGCCTGGAGGCGATGGGCATGGGTGAGGTTGAAGTAGGACTTGAAGAC GTCAGGGCCCTAGAGCTGGACGATATAAGCGGAGGGGTTTTGGAACCGTC GAGGATGGAG back to top
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