mRNA_H-paniculata_contig1108.699.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig1108.699.1 vs. uniprot
Match: D8LRQ0_ECTSI (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ0_ECTSI) HSP 1 Score: 137 bits (344), Expect = 5.850e-39 Identity = 71/100 (71.00%), Postives = 80/100 (80.00%), Query Frame = 1 Query: 1 MVGFVDNQVKELKKQWKRKRQLAFHTLYLVMIVFSGLMIWKSIMVLTKSESPVVIVLTDSMLPAIQHGDVLFLTNGDERIRVGEIVVFKIEGRDIPIVHR 300 MV FVD QV ELKK W KRQLAF L L MIV S LMIWKS+MV+TKSESPVV+VL+ SM PA Q GD+LFL NGDE +R GE+VVFKI+ R+IPIVHR Sbjct: 1 MVDFVDKQVDELKKLWHNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHR 100
BLAST of mRNA_H-paniculata_contig1108.699.1 vs. uniprot
Match: A0A835Z4U9_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A835Z4U9_9STRA) HSP 1 Score: 132 bits (333), Expect = 2.640e-37 Identity = 69/99 (69.70%), Postives = 79/99 (79.80%), Query Frame = 1 Query: 4 VGFVDNQVKELKKQWKRKRQLAFHTLYLVMIVFSGLMIWKSIMVLTKSESPVVIVLTDSMLPAIQHGDVLFLTNGDERIRVGEIVVFKIEGRDIPIVHR 300 + VD QV ELKK WK KRQLAF L L MIV S LMIWKS+MV+T+SESPVV+VL+ SM PA Q GD+LFL N D+ IRVGE+VVFKI+ RDIPIVHR Sbjct: 1 MDIVDKQVVELKKLWKNKRQLAFQGLNLAMIVLSALMIWKSLMVVTRSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEVVVFKIKDRDIPIVHR 99
BLAST of mRNA_H-paniculata_contig1108.699.1 vs. uniprot
Match: A0A7S3M735_9STRA (Signal peptidase I n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M735_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.510e-36 Identity = 68/96 (70.83%), Postives = 76/96 (79.17%), Query Frame = 1 Query: 13 VDNQVKELKKQWKRKRQLAFHTLYLVMIVFSGLMIWKSIMVLTKSESPVVIVLTDSMLPAIQHGDVLFLTNGDERIRVGEIVVFKIEGRDIPIVHR 300 V NQV E+KK WK KRQL L L MIVFS LMIWK +MV+TKSESPVV+VL+ SM PA Q GD+LFLTN D+ IR GEIVVFKI+ RDIPIVHR Sbjct: 4 VKNQVVEIKKLWKNKRQLTLQALNLAMIVFSALMIWKGLMVVTKSESPVVVVLSGSMEPAFQRGDILFLTNQDDPIRAGEIVVFKIKDRDIPIVHR 99
BLAST of mRNA_H-paniculata_contig1108.699.1 vs. uniprot
Match: A0A7S1U989_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7S1U989_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.560e-36 Identity = 71/100 (71.00%), Postives = 78/100 (78.00%), Query Frame = 1 Query: 1 MVGFVDNQVKELKKQWKRKRQLAFHTLYLVMIVFSGLMIWKSIMVLTKSESPVVIVLTDSMLPAIQHGDVLFLTNGDERIRVGEIVVFKIEGRDIPIVHR 300 M V QV ELKK W KRQL F +L L MIVFS LMIWKS+MVLTKSESPVV+VL+ SM PA Q GD+LFL+N D IRVGEIVVFKI+ RDIPIVHR Sbjct: 1 MWEIVQMQVFELKKLWANKRQLLFQSLNLAMIVFSALMIWKSLMVLTKSESPVVVVLSGSMEPAFQRGDILFLSNHDSPIRVGEIVVFKIKDRDIPIVHR 100
BLAST of mRNA_H-paniculata_contig1108.699.1 vs. uniprot
Match: A0A7S0SWE0_9STRA (Signal peptidase I n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWE0_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.140e-36 Identity = 68/99 (68.69%), Postives = 77/99 (77.78%), Query Frame = 1 Query: 4 VGFVDNQVKELKKQWKRKRQLAFHTLYLVMIVFSGLMIWKSIMVLTKSESPVVIVLTDSMLPAIQHGDVLFLTNGDERIRVGEIVVFKIEGRDIPIVHR 300 + V NQ ELKK WK KRQL+F L L MIVFS LMIWK +M +TKSESPVV+VL+ SM PA Q GD+LFL N D+ IRVGEIVVFKI+ RDIPIVHR Sbjct: 1 MNIVKNQAFELKKLWKNKRQLSFQGLNLAMIVFSALMIWKGLMFITKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHR 99
BLAST of mRNA_H-paniculata_contig1108.699.1 vs. uniprot
Match: A0A7S2RVP6_9STRA (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVP6_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.690e-35 Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 1 Query: 13 VDNQVKELKKQWKRKRQLAFHTLYLVMIVFSGLMIWKSIMVLTKSESPVVIVLTDSMLPAIQHGDVLFLTNGDERIRVGEIVVFKIEGRDIPIVHR 300 +D Q+ ELKK W+ KRQ F L L MIVFS LMIWK +M +TKSESPVV+VL+ SM PA Q GD+LFL N D+ IRVGE+VVFKI+ RDIPIVHR Sbjct: 4 IDAQISELKKLWRNKRQFLFQALNLAMIVFSALMIWKGLMFITKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEVVVFKIKDRDIPIVHR 99
BLAST of mRNA_H-paniculata_contig1108.699.1 vs. uniprot
Match: A0A6V1QND9_HETAK (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QND9_HETAK) HSP 1 Score: 127 bits (319), Expect = 3.590e-35 Identity = 65/100 (65.00%), Postives = 78/100 (78.00%), Query Frame = 1 Query: 1 MVGFVDNQVKELKKQWKRKRQLAFHTLYLVMIVFSGLMIWKSIMVLTKSESPVVIVLTDSMLPAIQHGDVLFLTNGDERIRVGEIVVFKIEGRDIPIVHR 300 M+ ++ Q+ ELKK WK KR LAF L L MIVFS LMIWKS+MV T+SESPVV+VL+ SM PA Q GD+LFLTN + IR GE+VVFKI+ R+IPIVHR Sbjct: 1 MMELIEQQLDELKKLWKNKRALAFQALNLAMIVFSALMIWKSLMVWTQSESPVVVVLSGSMEPAFQRGDILFLTNHQDPIRAGEVVVFKIKDREIPIVHR 100
BLAST of mRNA_H-paniculata_contig1108.699.1 vs. uniprot
Match: A0A6U5HKR9_9STRA (Signal peptidase I n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HKR9_9STRA) HSP 1 Score: 124 bits (312), Expect = 4.120e-34 Identity = 63/100 (63.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 1 MVGFVDNQVKELKKQWKRKRQLAFHTLYLVMIVFSGLMIWKSIMVLTKSESPVVIVLTDSMLPAIQHGDVLFLTNGDERIRVGEIVVFKIEGRDIPIVHR 300 M +D Q+ ELKK W KRQLAF L L MIVFS LMIWK +M +TKSESPVV+VL+ SM PA Q GD+LFL N + + VG++VVFKI RDIPIVHR Sbjct: 1 MKDIIDKQIVELKKLWLNKRQLAFQALNLAMIVFSALMIWKGLMCVTKSESPVVVVLSGSMEPAFQRGDILFLDNSNPEVAVGDVVVFKIRDRDIPIVHR 100
BLAST of mRNA_H-paniculata_contig1108.699.1 vs. uniprot
Match: F0YAE9_AURAN (Signal peptidase I n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0YAE9_AURAN) HSP 1 Score: 123 bits (309), Expect = 1.590e-33 Identity = 65/96 (67.71%), Postives = 73/96 (76.04%), Query Frame = 1 Query: 13 VDNQVKELKKQWKRKRQLAFHTLYLVMIVFSGLMIWKSIMVLTKSESPVVIVLTDSMLPAIQHGDVLFLTNGDERIRVGEIVVFKIEGRDIPIVHR 300 VD Q+ ELKK WK KR L L L MIVFS LMIWK +M +TKSESPVV+VL+ SM PA Q GD+LFL N D IRVGE+VVFKI+ RDIPIVHR Sbjct: 4 VDQQIFELKKLWKNKRLLLHQGLNLAMIVFSALMIWKGLMFVTKSESPVVVVLSGSMEPAFQRGDILFLNNQDNPIRVGEVVVFKIKDRDIPIVHR 99
BLAST of mRNA_H-paniculata_contig1108.699.1 vs. uniprot
Match: W7TFR1_9STRA (Signal peptidase I n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFR1_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.330e-33 Identity = 65/100 (65.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 1 MVGFVDNQVKELKKQWKRKRQLAFHTLYLVMIVFSGLMIWKSIMVLTKSESPVVIVLTDSMLPAIQHGDVLFLTNGDERIRVGEIVVFKIEGRDIPIVHR 300 M V Q+ ELKK W+ R L +L L MIVFS LMIWK +M LTKSESPVV+VL+ SM PA Q GD+LFL N D+ IRVGEIVVFKI+ RDIPIVHR Sbjct: 1 MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHR 100 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1108.699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1108.699.1 >prot_H-paniculata_contig1108.699.1 ID=prot_H-paniculata_contig1108.699.1|Name=mRNA_H-paniculata_contig1108.699.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp MVGFVDNQVKELKKQWKRKRQLAFHTLYLVMIVFSGLMIWKSIMVLTKSEback to top mRNA from alignment at H-paniculata_contig1108:15613..16656+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1108.699.1 ID=mRNA_H-paniculata_contig1108.699.1|Name=mRNA_H-paniculata_contig1108.699.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1044bp|location=Sequence derived from alignment at H-paniculata_contig1108:15613..16656+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1108:15613..16656+ >mRNA_H-paniculata_contig1108.699.1 ID=mRNA_H-paniculata_contig1108.699.1|Name=mRNA_H-paniculata_contig1108.699.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at H-paniculata_contig1108:15613..16656+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |