mRNA_H-paniculata_contig1108.698.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig1108.698.1 vs. uniprot
Match: D8LRQ0_ECTSI (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ0_ECTSI) HSP 1 Score: 247 bits (630), Expect = 3.350e-78 Identity = 121/126 (96.03%), Postives = 124/126 (98.41%), Query Frame = 2 Query: 2 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISILTKGDSNKVNDRGLYVPGQMWLGRDAILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 379 SGSMEPAFQRGDILFL+NGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSIS+LTKGDSNKVNDRGLYVPGQMWL R+ ILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA Sbjct: 58 SGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 183
BLAST of mRNA_H-paniculata_contig1108.698.1 vs. uniprot
Match: A0A835Z4U9_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A835Z4U9_9STRA) HSP 1 Score: 220 bits (561), Expect = 8.320e-68 Identity = 102/126 (80.95%), Postives = 117/126 (92.86%), Query Frame = 2 Query: 2 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISILTKGDSNKVNDRGLYVPGQMWLGRDAILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 379 SGSMEPAFQRGDILFLNN D+P+R GEVVVFKIKDR+IPIVHR+M VHEKPDG++ +LTKGD+N+V+DRGLY PGQ+WL R+ ILGRARG LRYVGMVTI+LNDYP LKYVLVG+MGLFVLTN+EA Sbjct: 57 SGSMEPAFQRGDILFLNNQDDPIRVGEVVVFKIKDRDIPIVHRIMKVHEKPDGTVEVLTKGDNNRVDDRGLYAPGQLWLQREDILGRARGALRYVGMVTIVLNDYPALKYVLVGIMGLFVLTNKEA 182
BLAST of mRNA_H-paniculata_contig1108.698.1 vs. uniprot
Match: A0A6V1QND9_HETAK (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QND9_HETAK) HSP 1 Score: 216 bits (549), Expect = 5.520e-66 Identity = 103/126 (81.75%), Postives = 116/126 (92.06%), Query Frame = 2 Query: 2 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISILTKGDSNKVNDRGLYVPGQMWLGRDAILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 379 SGSMEPAFQRGDILFL N +P+RAGEVVVFKIKDREIPIVHRVM VHEK DG++ LTKGD+N+V+DRGLY PGQ+WLGR+ ILGRARGTLRYVGMVTIILNDYP LKYVLVG+MGLFVLT++E+ Sbjct: 58 SGSMEPAFQRGDILFLTNHQDPIRAGEVVVFKIKDREIPIVHRVMKVHEKGDGAVEALTKGDNNRVDDRGLYAPGQLWLGREDILGRARGTLRYVGMVTIILNDYPVLKYVLVGIMGLFVLTSKES 183
BLAST of mRNA_H-paniculata_contig1108.698.1 vs. uniprot
Match: A0A7S3M735_9STRA (Signal peptidase I n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M735_9STRA) HSP 1 Score: 215 bits (547), Expect = 1.070e-65 Identity = 99/126 (78.57%), Postives = 117/126 (92.86%), Query Frame = 2 Query: 2 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISILTKGDSNKVNDRGLYVPGQMWLGRDAILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 379 SGSMEPAFQRGDILFL N D+P+RAGE+VVFKIKDR+IPIVHRVM VHEK DGS+ +LTKGD+N+V+DRGLY PGQ+WL R+ ILGRA+GTLRY+GMVTIILNDYP LKYVL+G+MG+FVLTN+E+ Sbjct: 57 SGSMEPAFQRGDILFLTNQDDPIRAGEIVVFKIKDRDIPIVHRVMKVHEKEDGSVEVLTKGDNNRVDDRGLYAPGQLWLQREDILGRAKGTLRYLGMVTIILNDYPVLKYVLIGIMGIFVLTNKES 182
BLAST of mRNA_H-paniculata_contig1108.698.1 vs. uniprot
Match: A0A7S0SWE0_9STRA (Signal peptidase I n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWE0_9STRA) HSP 1 Score: 215 bits (547), Expect = 1.070e-65 Identity = 101/126 (80.16%), Postives = 115/126 (91.27%), Query Frame = 2 Query: 2 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISILTKGDSNKVNDRGLYVPGQMWLGRDAILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 379 SGSMEPAFQRGDILFLNN D+P+R GE+VVFKIKDR+IPIVHRVM VHEK DG I +LTKGD+N+V+DRGLY PGQ WL R+ ILGRARGTLRY+GMVTIILNDYP LKYVL+G+MGLFVLTN+E+ Sbjct: 57 SGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVMKVHEKADGKIEVLTKGDNNRVDDRGLYAPGQQWLQREDILGRARGTLRYLGMVTIILNDYPILKYVLIGVMGLFVLTNKES 182
BLAST of mRNA_H-paniculata_contig1108.698.1 vs. uniprot
Match: W7TFR1_9STRA (Signal peptidase I n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFR1_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.760e-64 Identity = 98/126 (77.78%), Postives = 114/126 (90.48%), Query Frame = 2 Query: 2 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISILTKGDSNKVNDRGLYVPGQMWLGRDAILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 379 SGSMEPAFQRGDILFLNN D+P+R GE+VVFKIKDR+IPIVHRV+ VH+K DG + +LTKGD+N+V DRGLY PGQ+WL R+ ILGRA GTLRY+GMVTIILNDYP LKYVLVG+MGLFVLTN+E+ Sbjct: 58 SGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKES 183
BLAST of mRNA_H-paniculata_contig1108.698.1 vs. uniprot
Match: A0A7S1U989_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7S1U989_9STRA) HSP 1 Score: 211 bits (536), Expect = 4.990e-64 Identity = 98/126 (77.78%), Postives = 114/126 (90.48%), Query Frame = 2 Query: 2 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISILTKGDSNKVNDRGLYVPGQMWLGRDAILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 379 SGSMEPAFQRGDILFL+N D P+R GE+VVFKIKDR+IPIVHRV VHEKPDG + +LTKGD+N+V+DRGLY PGQ+WL R+ ILGRA GTLRYVGMVTIILND+P LKY+LVG+MGLFVLTN+E+ Sbjct: 58 SGSMEPAFQRGDILFLSNHDSPIRVGEIVVFKIKDRDIPIVHRVTKVHEKPDGKVELLTKGDNNRVDDRGLYAPGQLWLNREDILGRAVGTLRYVGMVTIILNDFPALKYLLVGIMGLFVLTNKES 183
BLAST of mRNA_H-paniculata_contig1108.698.1 vs. uniprot
Match: A0A7S2RVP6_9STRA (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVP6_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.050e-62 Identity = 99/125 (79.20%), Postives = 113/125 (90.40%), Query Frame = 2 Query: 2 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISILTKGDSNKVNDRGLYVPGQMWLGRDAILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNRE 376 SGSMEPAFQRGDILFLNN D+P+R GEVVVFKIKDR+IPIVHRV+ VHEKPDG + +LTKGD+N+V+DRGLY GQ ++GR+ ILGRA GTLRYVGMVTIILNDYP LKYVLV +MGLFVLTN+E Sbjct: 57 SGSMEPAFQRGDILFLNNQDDPIRVGEVVVFKIKDRDIPIVHRVLKVHEKPDGRVELLTKGDNNRVDDRGLYALGQQFIGREDILGRAVGTLRYVGMVTIILNDYPALKYVLVAVMGLFVLTNKE 181
BLAST of mRNA_H-paniculata_contig1108.698.1 vs. uniprot
Match: F0YAE9_AURAN (Signal peptidase I n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0YAE9_AURAN) HSP 1 Score: 204 bits (518), Expect = 3.620e-61 Identity = 100/136 (73.53%), Postives = 113/136 (83.09%), Query Frame = 2 Query: 2 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISILTKGDSNKVNDRGLYVPGQMWLGRDAILGRAR-----------GTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNRE 376 SGSMEPAFQRGDILFLNN D P+R GEVVVFKIKDR+IPIVHRVM VHEK DG++ +LTKGD+N+V+DRGLY PGQ+WL R+ +LGRA GTLRYVGMVTIILNDYP LKYVLV +MGLFVLTN+E Sbjct: 57 SGSMEPAFQRGDILFLNNQDNPIRVGEVVVFKIKDRDIPIVHRVMKVHEKADGAVELLTKGDNNRVDDRGLYAPGQLWLAREDVLGRAIRGGNKMIQGAIGTLRYVGMVTIILNDYPALKYVLVSIMGLFVLTNKE 192
BLAST of mRNA_H-paniculata_contig1108.698.1 vs. uniprot
Match: A0A835Z7U7_9STRA (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U7_9STRA) HSP 1 Score: 198 bits (504), Expect = 3.110e-59 Identity = 90/126 (71.43%), Postives = 111/126 (88.10%), Query Frame = 2 Query: 2 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISILTKGDSNKVNDRGLYVPGQMWLGRDAILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 379 SGSMEPAFQRGDILFL+N D PLR GEVVV+K+ +++IPIVHR+M VHEKPDGS+ +LTKGD+N+ +D G+Y PGQ WL R+ ILGRARG LRYVGMVTI LNDYP LKYVL+G+MG+FVLT++++ Sbjct: 57 SGSMEPAFQRGDILFLSNHDAPLRVGEVVVYKVANKDIPIVHRIMKVHEKPDGSVEVLTKGDANRYDDTGIYAPGQKWLKREDILGRARGALRYVGMVTIYLNDYPKLKYVLLGIMGIFVLTSKDS 182 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1108.698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1108.698.1 >prot_H-paniculata_contig1108.698.1 ID=prot_H-paniculata_contig1108.698.1|Name=mRNA_H-paniculata_contig1108.698.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp MEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGback to top mRNA from alignment at H-paniculata_contig1108:11931..14570+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1108.698.1 ID=mRNA_H-paniculata_contig1108.698.1|Name=mRNA_H-paniculata_contig1108.698.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2640bp|location=Sequence derived from alignment at H-paniculata_contig1108:11931..14570+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1108:11931..14570+ >mRNA_H-paniculata_contig1108.698.1 ID=mRNA_H-paniculata_contig1108.698.1|Name=mRNA_H-paniculata_contig1108.698.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at H-paniculata_contig1108:11931..14570+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |