Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Ec32 ortholog description | hypothetical protein |
Ec32 ortholog | Ec-18_003660.1 |
Exons | 2 |
Model size | 1712 |
Cds size | 1338 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11078.697.1 >prot_H-paniculata_contig11078.697.1 ID=prot_H-paniculata_contig11078.697.1|Name=mRNA_H-paniculata_contig11078.697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=446bp
MSGNSGSRKKAGVLKPQATARRSNSSSSSGASSLSGRRESEAIHSNKNGN DNDKKLHDGASLTLITADTFSYEDVSDLCTVTPAPRRAGKRVSTSAGAGA AAAATAKNGGGEAARGNSSKGRINGARQHTTTDKGENGSARRRRLRKRTD FTSTTESNPTDGEQTARSAAAAAVETTREEGKRRTTINGAPVTTPKNAKG KISLQRAAANKDNGSNDSSTSSNNNAATTNINSGNNNKNTSTSTISTASI SHNSSNDKIESTNGTENKVEAAQQEGEGGAGADNGDNSSTESEGTAATPA TTRKIPSSVSTITAAAIATLITSAGKVGTKSEVESSGCSGDGAKHRGTLE RQNGDTMKFMSGEVKSIAGERAAAMVVAERSVERSAPAVAERSIERSAGP SLTGVAESGARTVGSATVAVASGREKRKRDLVSDKEGDTVAPRGSK back to topmRNA from alignment at H-paniculata_contig11078:520..3597- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig11078.697.1 ID=mRNA_H-paniculata_contig11078.697.1|Name=mRNA_H-paniculata_contig11078.697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3078bp|location=Sequence derived from alignment at H-paniculata_contig11078:520..3597- (Halopteris paniculata Hal_grac_a_UBK monoicous) AGAAACTAAAGGAGGAATCGCGCGTGGGGGGGGGATAAGGGAAGGGATAA
AAAAGAAACCCCGAGAGGCAGTCAGAGAGGAGGAGAGACAAGAGGAGCAA
TCATTTTTTGCATTTCAAAAAAATAACACACAATACACGTATTTGTGTAC
TGTCTGTGTGAGACAGCCGTTTGTTTCTGTGTTTGGTCGTTCGGTGTGCT
TCTGAGGCCTCGCCGCTCAAACCTTGAAGCGAGGTCAGAGTCTATCTAAG
GTAGCGAGGGACAGACGAGATTATATCTGCACGCCGACACCTTCTGGGGG
GAAGCACGAACGTCTTGCCGATCAAGGTCCAGCTGCTATTCACTCAACCG
CAGTCTCCGGCTGCCGTGTTATCATGAGTGGAAACAGCGGTTCAAGGAAA
AAGGCAGGCGTACTAAAGCCGCAAGCAACTGCACGGAGAAGCAACAGCAG
CAGCAGCAGCGGGGCTTCGTCTCTGTCAGGCAGACGCGAATCTGAGGCAA
TCCATAGCAACAAAAACGGCAACGATAACGATAAGAAACTACACGATGGC
GCAAGTTTGACGCTAATCACTGCAGATACGTTCAGCTACGAGGACGTATC
CGACTTGTGCACGGTCACGCCTGCTCCTAGGCGCGCGGGAAAGAGAGTAT
CGACATCTGCTGGGGCAGGGGCGGCGGCGGCGGCGACGGCAAAGAATGGA
GGTGGTGAAGCCGCGCGTGGGAACAGCAGCAAGGGCCGTATCAATGGCGC
CCGCCAACACACCACGTGAGATAGCAAGATAGAGACAGAGGGGAGACACA
GAGCTTGTGTTGGTGTGGTGTTGGTGTGGCCTGTCCTGGGTCGCGATCTC
GTCATCATCGGTCGAGTAGTGAGATGGTAGACGAAATCGTTTGGCGGAAG
CAATACTGTACTGTAGATAACCCCCCATTCTATTTATAAGGTGTACCTCA
ACTCGATTCGTTCAATAGAAGAGTCTACAGGGAATAGGATGGACGATGAG
GGCATGTGATATATGAGAGAGCGAGATAAAGAGAGGCAAGAGAGTTGGTG
TTGGTGCGTTGTTGGCGGGCCCTTGTTCAAGAGGCTTCTCATGATGGCCG
CGATGCCAGTGTCATAATTGGAAGTCGTGGTACTCGTCGTTTCAGAGTAG
CTTTTCGATTCTTAACTCGAGTGACTTTTGGATAAGGAATCTTCACGGGC
GTAATGCCTGTCGTGCGTGGGCTATATGGGTTTTTGGTCGTGACTGAATG
GAAAAGACGACAAAGACAAATTGCACATACATAGTTCACCCTTTGTAATT
ACCATATACCTGGTACCTGGTAGTATGTAAGGTAGCCCCCCCCCCTGTAA
GGCGGATGGATATTTTAATACCCCCTATCCTAGCTTGTCGCCATACCCAG
CCTCGCCTTAACATCGAGGTATCCCACCCTCTCTTACGCAACTCTACAAT
TTGCTTGTTCCAAGTGCTCTGCAGTGATTAGGCCCAGTACGTTCTTGTTT
CAATTGACTATACAGTAGTGTTTCAATTTCGGAGAGCATGCCCACAAACA
ATACTATACTGTAATCGACAGATGTCGAATAAGGGGGGAAATTTTGCCCC
CATGTCTGTGCTTCTTGCTTGTATTATGTGCCGAAAAGAACGGAATTCCA
CTGCTGTTGTCCTATGCGACAAGAGCCTTCCGCTCCATTTTGGCGTGACA
ACTCGACGGTGATAGCTGCAGTGGCAGCTGATATTAATTCCCCTTGTAAA
GAAACGCAACCTGGCCTGGCGATAAGCTGAAATGTCGCTCGATCCCAGGG
CTCCGCCCCAGGATTGTAGAGATACGAGGTCAATGTTCTCTGCCTCTGGC
ACGTATTTACCGTCAGTGCATCCCCCTTTGTATTGTCATAATTTTTTCAT
AGATAGTTCAAATGGTGCGCTGAATGATGAGCACACGCAGCAGCTTTGGA
ATGTGAGCTACCGGACCTTCGGATCATATCCAGTACGTTACTTCAAAGCA
AATTCGATGTAGTGACCATTTTTTAGATAGAAGTGGATAGAATTTTTTTT
TAATGTGTTGGTTGCATGTTTTGCTAGTACCATTTCTCTTACACCGCAGG
ACTTATGGACCTCCCCCTCCCCACCCGAACAGTACCGACAAAGGTGAAAA
CGGCTCAGCTAGGCGCAGACGGCTGCGAAAACGGACAGACTTCACATCCA
CCACAGAATCGAACCCCACGGACGGAGAACAAACTGCACGGTCGGCGGCG
GCGGCGGCAGTGGAGACGACACGGGAGGAAGGTAAAAGACGAACAACAAT
AAACGGTGCGCCTGTGACAACGCCAAAAAACGCAAAGGGCAAAATCAGTC
TGCAGCGCGCGGCGGCGAACAAGGACAATGGCAGCAATGACAGCAGCACC
AGCAGTAACAACAACGCCGCCACCACCAACATCAACAGCGGTAACAACAA
TAAAAACACCAGCACCAGCACCATCAGCACCGCTTCCATCAGCCATAACA
GCAGCAACGACAAAATCGAATCGACGAACGGTACTGAAAATAAAGTGGAA
GCAGCACAGCAAGAAGGAGAAGGAGGAGCAGGAGCAGACAACGGCGACAA
CAGCAGCACCGAATCGGAGGGCACAGCAGCAACACCCGCGACCACTCGGA
AGATCCCTTCTTCTGTCTCCACTATTACCGCGGCTGCTATTGCCACTCTC
ATTACTAGCGCGGGAAAGGTTGGCACGAAAAGTGAGGTCGAAAGCAGCGG
GTGCAGTGGCGACGGCGCCAAGCATAGAGGCACACTTGAAAGGCAAAACG
GGGATACCATGAAGTTCATGTCAGGGGAGGTGAAATCGATCGCAGGGGAG
CGAGCGGCGGCGATGGTGGTGGCCGAACGGTCGGTAGAAAGATCTGCGCC
AGCGGTAGCGGAACGGTCTATAGAACGGTCTGCAGGTCCGTCGTTAACAG
GAGTAGCCGAGAGTGGCGCGAGGACGGTGGGGTCGGCGACGGTGGCGGTG
GCGTCTGGGAGAGAAAAGAGGAAAAGAGACTTGGTCAGTGATAAGGAGGG
TGACACGGTGGCGCCGCGCGGGAGTAAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig11078:520..3597- >mRNA_H-paniculata_contig11078.697.1 ID=mRNA_H-paniculata_contig11078.697.1|Name=mRNA_H-paniculata_contig11078.697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2676bp|location=Sequence derived from alignment at H-paniculata_contig11078:520..3597- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGAGTGGAAACAGCGGTTCAAGGAAAAAGGCAGGCGTACTAAAGCCGCA AGCAACTGCACGGAGAAGCAACAGCAGCAGCAGCAGCGGGGCTTCGTCTC TGTCAGGCAGACGCGAATCTGAGGCAATCCATAGCAACAAAAACGGCAAC GATAACGATAAGAAACTACACGATGGCGCAAGTTTGACGCTAATCACTGC AGATACGTTCAGCTACGAGGACGTATCCGACTTGTGCACGGTCACGCCTG CTCCTAGGCGCGCGGGAAAGAGAGTATCGACATCTGCTGGGGCAGGGGCG GCGGCGGCGGCGACGGCAAAGAATGGAGGTGGTGAAGCCGCGCGTGGGAA CAGCAGCAAGGGCCGTATCAATGGCGCCCGCCAACACACCACATGAGTGG AAACAGCGGTTCAAGGAAAAAGGCAGGCGTACTAAAGCCGCAAGCAACTG CACGGAGAAGCAACAGCAGCAGCAGCAGCGGGGCTTCGTCTCTGTCAGGC AGACGCGAATCTGAGGCAATCCATAGCAACAAAAACGGCAACGATAACGA TAAGAAACTACACGATGGCGCAAGTTTGACGCTAATCACTGCAGATACGT TCAGCTACGAGGACGTATCCGACTTGTGCACGGTCACGCCTGCTCCTAGG CGCGCGGGAAAGAGAGTATCGACATCTGCTGGGGCAGGGGCGGCGGCGGC GGCGACGGCAAAGAATGGAGGTGGTGAAGCCGCGCGTGGGAACAGCAGCA AGGGCCGTATCAATGGCGCCCGCCAACACACCACTACCGACAAAGGTGAA AACGGCTCAGCTAGGCGCAGACGGCTGCGAAAACGGACAGACTTCACATC CACCACAGAATCGAACCCCACGGACGGAGAACAAACTGCACGGTCGGCGG CGGCGGCGGCAGTGGAGACGACACGGGAGGAAGGTAAAAGACGAACAACA ATAAACGGTGCGCCTGTGACAACGCCAAAAAACGCAAAGGGCAAAATCAG TCTGCAGCGCGCGGCGGCGAACAAGGACAATGGCAGCAATGACAGCAGCA CCAGCAGTAACAACAACGCCGCCACCACCAACATCAACAGCGGTAACAAC AATAAAAACACCAGCACCAGCACCATCAGCACCGCTTCCATCAGCCATAA CAGCAGCAACGACAAAATCGAATCGACGAACGGTACTGAAAATAAAGTGG AAGCAGCACAGCAAGAAGGAGAAGGAGGAGCAGGAGCAGACAACGGCGAC AACAGCAGCACCGAATCGGAGGGCACAGCAGCAACACCCGCGACCACTCG GAAGATCCCTTCTTCTGTCTCCACTATTACCGCGGCTGCTATTGCCACTC TCATTACTAGCGCGGGAAAGGTTGGCACGAAAAGTGAGGTCGAAAGCAGC GGGTGCAGTGGCGACGGCGCCAAGCATAGAGGCACACTTGAAAGGCAAAA CGGGGATACCATGAAGTTCATGTCAGGGGAGGTGAAATCGATCGCAGGGG AGCGAGCGGCGGCGATGGTGGTGGCCGAACGGTCGGTAGAAAGATCTGCG CCAGCGGTAGCGGAACGGTCTATAGAACGGTCTGCAGGTCCGTCGTTAAC AGGAGTAGCCGAGAGTGGCGCGAGGACGGTGGGGTCGGCGACGGTGGCGG TGGCGTCTGGGAGAGAAAAGAGGAAAAGAGACTTGGTCAGTGATAAGGAG GGTGACACGGTGGCGCCGCGCGGGAGTAAGTACCGACAAAGGTGAAAACG GCTCAGCTAGGCGCAGACGGCTGCGAAAACGGACAGACTTCACATCCACC ACAGAATCGAACCCCACGGACGGAGAACAAACTGCACGGTCGGCGGCGGC GGCGGCAGTGGAGACGACACGGGAGGAAGGTAAAAGACGAACAACAATAA ACGGTGCGCCTGTGACAACGCCAAAAAACGCAAAGGGCAAAATCAGTCTG CAGCGCGCGGCGGCGAACAAGGACAATGGCAGCAATGACAGCAGCACCAG CAGTAACAACAACGCCGCCACCACCAACATCAACAGCGGTAACAACAATA AAAACACCAGCACCAGCACCATCAGCACCGCTTCCATCAGCCATAACAGC AGCAACGACAAAATCGAATCGACGAACGGTACTGAAAATAAAGTGGAAGC AGCACAGCAAGAAGGAGAAGGAGGAGCAGGAGCAGACAACGGCGACAACA GCAGCACCGAATCGGAGGGCACAGCAGCAACACCCGCGACCACTCGGAAG ATCCCTTCTTCTGTCTCCACTATTACCGCGGCTGCTATTGCCACTCTCAT TACTAGCGCGGGAAAGGTTGGCACGAAAAGTGAGGTCGAAAGCAGCGGGT GCAGTGGCGACGGCGCCAAGCATAGAGGCACACTTGAAAGGCAAAACGGG GATACCATGAAGTTCATGTCAGGGGAGGTGAAATCGATCGCAGGGGAGCG AGCGGCGGCGATGGTGGTGGCCGAACGGTCGGTAGAAAGATCTGCGCCAG CGGTAGCGGAACGGTCTATAGAACGGTCTGCAGGTCCGTCGTTAACAGGA GTAGCCGAGAGTGGCGCGAGGACGGTGGGGTCGGCGACGGTGGCGGTGGC GTCTGGGAGAGAAAAGAGGAAAAGAGACTTGGTCAGTGATAAGGAGGGTG ACACGGTGGCGCCGCGCGGGAGTAAG back to top
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