mRNA_H-paniculata_contig1107.692.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1107.692.1 vs. uniprot
Match: D7G4R5_ECTSI (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R5_ECTSI) HSP 1 Score: 478 bits (1229), Expect = 5.100e-163 Identity = 237/349 (67.91%), Postives = 271/349 (77.65%), Query Frame = 1
Query: 106 WVDLNVPPEELRPAVSLTIGQCFNWRQATPDVWIGVIGSKVVAIRQTPSSTLFKVLNPGGLDGQRNGIFGTAATTGAEDGIAATLRDYFFLEEPLTPLYKRWSKGDPRMAVVAKCIPGVRVVRQDPVECLFSFICSSNNNIPRITLMLHKLRRTYGKLELSVGKGGLVGMGILEDEAECENWAREPLDFHSFPSAEVLAARAKEADLRTLAGFGYRAKFIVDTARLVVEGGGREWALAMRTKDRDTVRNQLVTLSGVGPKVADCVALFSLDQSSVIPVDVHVWRIACRDFDASLTGCKSLTPTVYSRVGKLFRNRFGPHAGWAHSLLFAAELPHCKVLLPPEMQREMDD 1152
W DL VPPEELRP +LT+GQCFNWRQA D W+GV+G +V+AIRQTP +TLF+ L+ DG AA +A TLR+YFFL PL PLY+RWS+GDPRMA VA I GVRVVRQDPVEC+FSFICSSNNNIPRIT ML KLRRTYG L L+VGKGGL G L + ECE WA+ PL+ HSFP+ + LA RA EADLR + GFGYRAK+IVD+A+L+ GG WAL MR KDRD VR+QLVTL GVGPKVADC+ALFSLDQ+S IPVDVHVWRIACRD+D +L CKSLTPTVY+RVG LFR+RFG AGWAHSLLFAAELP K L PEMQR+MD+
Sbjct: 38 WHDLCVPPEELRPDSTLTVGQCFNWRQAGADCWVGVLGREVIAIRQTPCTTLFRSLSAVTTDGDAK----VAAA------LATTLREYFFLRTPLAPLYQRWSEGDPRMAAVACSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNITECEEWAKLPLELHSFPTVDALATRATEADLRAM-GFGYRAKYIVDSAKLMHSNGGAGWALDMRNKDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGNLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQMDE 375
BLAST of mRNA_H-paniculata_contig1107.692.1 vs. uniprot
Match: A0A7S2DRB9_9STRA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRB9_9STRA) HSP 1 Score: 330 bits (845), Expect = 1.470e-104 Identity = 186/397 (46.85%), Postives = 240/397 (60.45%), Query Frame = 1
Query: 106 WVDLNVPPEELRPAVSLTIGQCFNWRQ----------------ATPDV-------------WIGVIGSKVVAIRQTPSSTLFKVLNPGGLDGQRNGIFGTAATTGAEDGIAATLRDYFFLEEPLTPLYKRWSKGDPRMAVVAKCIPGVRVVRQDPVECLFSFICSSNNNIPRITLMLHKLRRTYGK--LELSV-GKGGLVGMGILEDEAECENWAREPLDFHSFPSAEVLAARAKEADLRTLAGFGYRAKFIVDTARLVVEGGGREWALAMRTKD---RDTVRNQLVTLSGVGPKVADCVALFSLDQSSVIPVDVHVWRIACRDFDASLTGCKSLTPTVYSRVGKLFRNRFGPHAGWAHSLLFAAELPHCKVLLPPEMQREMDDFRREEKDSKTTAK 1191
W DL+ PPEELR SL GQCFNWR ++P W+GV+G +VVA+R+T S F LN +N A E + + L D F LE PL LY WS+ D R+A VA+ IPG+RV+RQDPVECLF+FICSSNNNIPRITLM++++R YG ++++V GG +D F+SFP EV+A RA+E + R L G GYRA+F+ ++A ++ GGR W + +R +D R+ V +L +GVG KVADCVALFSLDQS +IPVD HVW+IACRD+D++L+ KSLTP +Y R+G LFR RFG AGWAHSLLFAAEL K LP +M+ EMD FR +EK +K K
Sbjct: 47 WYDLSTPPEELRVTASLATGQCFNWRPIKLPLVSTEKRPTTCASSPPANAIGLEKSDIDFDWVGVVGDRVVALRETGGSVHFACLN------NKN------AKKDQETELRSELEDMFQLEVPLKGLYHSWSRADDRLARVAEAIPGLRVLRQDPVECLFAFICSSNNNIPRITLMMNRIRAAYGTHLMDIAVVSDGGSTKSSSTDDPTRIAQPDTVVHRFYSFPDVEVMA-RAREEEYRHL-GLGYRARFVRESAGSLLSLGGRPWLVGLRDRDAYSREAVLEELKKFTGVGSKVADCVALFSLDQSDLIPVDTHVWQIACRDYDSTLSEVKSLTPKIYDRIGDLFRTRFGDKAGWAHSLLFAAELAAFKSQLPEDMREEMDVFRAQEKAAKLALK 429
BLAST of mRNA_H-paniculata_contig1107.692.1 vs. uniprot
Match: A0A4D9CXL3_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXL3_9STRA) HSP 1 Score: 337 bits (865), Expect = 1.190e-103 Identity = 192/393 (48.85%), Postives = 237/393 (60.31%), Query Frame = 1
Query: 94 STNGWVDLNVPPEELRPAVSLTIGQCFNWRQ------------------------------ATPDVWIGVIGSKVVAIRQTPSSTLFK----VLNPGGLDGQRNGIFGTAATTGAEDGIA-ATLRDYFFLEEPLTPLYKRWSKGDPRMAVVAKCIPGVRVVRQDPVECLFSFICSSNNNIPRITLMLHKLRRTYGKLELSVGKGGLVGMGILEDEAECENWAREPLDFHSFPSAEVLAARAKEADLRTLAGFGYRAKFIVDTARLVVEGGGREWALAMRTKDRDTVRNQLVTLSGVGPKVADCVALFSLDQSSVIPVDVHVWRIACRDFDASLTGCKSLTPTVYSRVGKLFRNRFGPHAGWAHSLLFAAELPHCKVLLPPEMQREMDDFRREE 1167
S GW+DL+VPP ELRP SLT+GQCFNWR+ VWIGV+ V+ IRQTP++TL + ++ G ++G R G ED + A L+DYF + L PLY W++GD RM VA+ +PGVRV+RQDPVECLFSFICSSNNNIPRI LML +LR+TYG+ +GKG +H+FP LA+ A E +LR L G GYRA+FI TA +++ GGREW +++R K R+ + L T GVG KVADCVALFSLDQ IPVDVHVWRIACRD+ L KSLTP VY VG +FRN+FG HAGWAHSLLFAAELP + LP +Q EM F++EE
Sbjct: 20 SAKGWMDLDVPPHELRPEFSLTMGQCFNWRRQGLETQAKVAVGEGEEGGREXXXXXXXXGGGCDKVWIGVLDRHVLEIRQTPTTTLVRRVGASVDEGRVEGGREGE--------VEDKVLMARLQDYFQVNTSLRPLYHCWAEGDVRMKTVAEHLPGVRVLRQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGE---PLGKG-----------------------YHAFPPLSSLAS-ASEEELRGL-GLGYRARFIKLTASQLLDLGGREWLMSLREKSREEAQQALCTFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLILQNEMLAFKKEE 376
BLAST of mRNA_H-paniculata_contig1107.692.1 vs. uniprot
Match: A0A7S1CUH0_9STRA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CUH0_9STRA) HSP 1 Score: 317 bits (811), Expect = 3.550e-101 Identity = 170/364 (46.70%), Postives = 224/364 (61.54%), Query Frame = 1
Query: 100 NGWVDLNVPPEELRPAVSLTIGQCFNWR----QATPDV----------------WIGVIGSKVVAIRQTPSSTLFKVLNPGGLDGQRNGIFGTAATTGAEDGIAATLRDYFFLEEPLTPLYKRWSKGDPRMAVVAKCIPGVRVVRQDPVECLFSFICSSNNNIPRITLMLHKLRRTYGKLELSVGKGGLVGMGILEDEAECENWAREPLDFHSFPSAEVLAARAKEADLRTLAGFGYRAKFIVDTARLVVEGGGREWALAMRTKDR-DTVRNQLVTLSGVGPKVADCVALFSLDQSSVIPVDVHVWRIACRDFDASLTG-CKSLTPTVYSRVGKLFRNRFGPHAGWAHSLLFAAELPHCKVLLP 1125
N W+DL+VPP+ELRP+ +LT GQCFNW + +PD W+G +G +V++I++TP++TLF+VL+ G +G L+ YF LE PL+PLY+ WSK D R+ +A IPGVR++RQ P+EC+FSFICSSNNNIPRIT ML R TYG + + + D+ + L SFP+ + LA A E DLR + G GYRAKFI+ T L+ GG E+ L +R+ D V+++L+ SG+G KVADCVALFSLDQ IPVD+HV IA RD+D ++ G KSLTPT+Y RVG LFR+RF AGWAHSLLF AELP + +LP
Sbjct: 7 NEWIDLDVPPQELRPSSTLTNGQCFNWMVVETEESPDAINSPRQSAWGTHDGKEWVGPLGDRVLSIKETPTTTLFRVLH------------------GPTEGTKEYLQQYFRLETPLSPLYEEWSKADTRLKKIAAAIPGVRILRQAPLECMFSFICSSNNNIPRITKMLSSFRETYGSFMMDIP----ISSSAANDD--------DSLSIFSFPTLDSLA-NASEGDLRAM-GLGYRAKFIIGTRDLLQTSGGEEFLLNLRSNDDCQAVQDELIKFSGIGRKVADCVALFSLDQDDSIPVDIHVQHIASRDYDPTVLGQAKSLTPTIYKRVGDLFRSRFPNRAGWAHSLLFVAELPSFRSVLP 338
BLAST of mRNA_H-paniculata_contig1107.692.1 vs. uniprot
Match: A0A6U6FTQ8_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6FTQ8_9STRA) HSP 1 Score: 314 bits (805), Expect = 3.280e-97 Identity = 179/391 (45.78%), Postives = 226/391 (57.80%), Query Frame = 1
Query: 106 WVDLNVPPEELRPAVSLTIGQCFNW------RQATPD---------------------VWIGVIGSKVVAIRQTPSSTLFKVLNPGGLDGQRNGIFGTAATTGAEDGIAATLRDYFFLEEPLTPLYKRWSKGDPRMAVVAKCIPGVRVVRQDPVECLFSFICSSNNNIPRITLMLHKLRRTYGKLELSVGKGGLVGMGILEDEAECENWAREPLDFHSFPSAEVLAARAKEADLRTLAGFGYRAKFIVDTARLVVEGGGREWALAMRTKDRDTVRNQLVTLSGVGPKVADCVALFSLDQSSVIPVDVHVWRIACRDFDASLTGCKSLTPTVYSRVGKLFRNRFGPHAGWAHSLLFAAELPHCKVLLPPEMQREMDDFRREEKDSKTTAKAE 1197
W DL + P+ELRP+ +LT GQCFNW R P W+G + V IR+T ++TLF+VL+ G G LR YF LE L PLY WS+ D R++ +A IPGVRVVRQDP ECLFSFICSSNNNIPRITLML +LR YG + V L G+L + E L +SFP+ LA A + DLR + G GYRAK+I +T +L+ E GG ++ ++R + V+ +L+ SG+G KVADCVALFSLDQ IPVDVHV IA R++D +L KSLTPTVY RVG +FR RF HAGWAHSLLF AELP + LP ++ EMD +R++E K +AE
Sbjct: 201 WTDLRISPDELRPSATLTTGQCFNWIVVQSDRNGLPSGDDGGVANMAQKSAWGTHDATEWVGPLRDWVFCIRETSTTTLFRVLH------------------GTPKGAEEYLRRYFQLETQLVPLYNLWSESDSRLSKIAAAIPGVRVVRQDPKECLFSFICSSNNNIPRITLMLSRLREKYGVHLMEVPARTLDSGGVLR--------SGEKLKIYSFPTLAALAP-ATDIDLRAM-GLGYRAKYIAETTKLLNEVGGEDFLFSLRKSNASFVQEELIKFSGIGRKVADCVALFSLDQIEAIPVDVHVEHIARRNYDPTLVEVKSLTPTVYKRVGNIFRRRFSSHAGWAHSLLFVAELPSFRPALPGDIVEEMDLWRQQELARKAAKRAE 563
BLAST of mRNA_H-paniculata_contig1107.692.1 vs. uniprot
Match: A0A7S3Q6L0_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q6L0_9STRA) HSP 1 Score: 308 bits (789), Expect = 9.190e-96 Identity = 170/399 (42.61%), Postives = 241/399 (60.40%), Query Frame = 1
Query: 100 NGWVDLNVPPEELRPAVSLTIGQCFNWRQATPDV-----------------------------WIGVIGSKVVAIRQTPSSTLFKVLNPGGLDGQRNGIFGTAATTGAEDGIAATLRDYFFLEEPLTPLYKRWSKGDPRMAVVAKCIPGVRVVRQDPVECLFSFICSSNNNIPRITLMLHKLRRTYGKLELSVGKGGLVGMGILEDEAECENWAREPLDF----HSFPSAEVLAARAKEADLRTLAGFGYRAKFIVDTARLVVEGGGREWALAMRTK-DRDTVRNQLVTLSGVGPKVADCVALFSLDQSSVIPVDVHVWRIACRDFDAS-LTGCKSLTPTVYSRVGKLFRNRFGPHAGWAHSLLFAAELPHCKVLLPPEMQREMDDFRREEKDSKTTAK 1191
N W+DL VPP ELRP+ +LT GQCFNW D+ W+G I + +++I++TP +T++++L + + ++ L DYF LE L PLY+ WS+ D R++ +A IPG+R++RQDPVECLFSFICSSNNNIPRIT ML R TYG+ + + + +LE C+ + EPL+ +SFP+ E L + + E +LR + G GYRAK+I++T ++++ GG+E+ L++R + D V+ +L+ SG+G KVADCVALFSLDQ + IPVDVHV IA RD+D + L G KSLTPT+Y +V +LF++RF +AGWAHSLLF AEL + +LP EM +MD +R E K K
Sbjct: 117 NSWIDLKVPPHELRPSATLTTGQCFNWNVVHDDIRIRMMEENKDMDILTSASASAWGTFNETEWVGPISNMILSIKETPDTTMYRIL------------YQSPTCDVNHINMSEFLTDYFQLETALLPLYQSWSQNDERLSQIAAVIPGLRIIRQDPVECLFSFICSSNNNIPRITKMLSSFRETYGEKMMD------LPVRLLE----CDGLSLEPLELTMAIYSFPTLEELKS-STEKELREM-GLGYRAKYIIETRDMLIDFGGKEYLLSLRKQSDSKAVQEELIQFSGIGRKVADCVALFSLDQHNAIPVDVHVQHIASRDYDPTVLDGAKSLTPTIYQKVARLFQDRF-EYAGWAHSLLFVAELKSFRDVLPAEMVADMDKWREAENARKAALK 490
BLAST of mRNA_H-paniculata_contig1107.692.1 vs. uniprot
Match: A0A8J5XJ63_DIALT (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJ63_DIALT) HSP 1 Score: 300 bits (768), Expect = 3.160e-93 Identity = 171/368 (46.47%), Postives = 217/368 (58.97%), Query Frame = 1
Query: 106 WVDLNVPPEELRPAVSLTIGQCFNWRQATPDV---WIGVIGSKVVAIRQTPSSTLFKVLNPGGLDGQRNGIFGTAATTGAEDGIAATLRDYFFLEEPLTPLYKRWSKGDPRMAVVAKCIPGVRVVRQDPVECLFSFICSSNNNIPRITLMLHKLRRTYGKLELSVGKGGLVGMGILEDEAECENWAREPLDFHSFPSAEVLAARAKEADLRTLAGFGYRAKFIVDTARLVVEGGGREWALAMRTKDRDTVRNQLVTLSGVGPKVADCVALFSLDQSSVIPVDVHVWRIACRDFDASLTGCKSLTPTVYSRVGKLFRNRFGPHAGWAHSLLFAAELPHCKVLLPPEMQREMDDFRREEKDSKTTAKAEQ 1200
W L ELR +L GQ F W + D W+GV+G +V+ +++ S F +A + D + L YF LE PL LY+RW D R V +PG+R++RQ+PVECLFSFICSSNNNI RIT +L +LR YG + + + G D A+ + F +FP+ E LA + EA+LR L G GYRA+FI +TA L++E GG +W + R + R+ V+ LV LSGVG KVADCVALFSLDQ + IPVDVHVW+IACRD+D SL KSLTP VY RVG LFR RFG HAGWAHS+LFAAELP + LLP +Q M FR E++ K EQ
Sbjct: 19 WHRLGAARAELRLHATLANGQAFTWSRVGSDAKSPWVGVVGGRVIVLKEEDSHVEFCC---------------PSAPEESPDALREALTAYFQLETPLVELYERWRSADERTCAVLNALPGLRILRQEPVECLFSFICSSNNNIGRITGILARLRAAYGT-RIPIRDASIFG-AASGDGADVPS-------FFAFPTIERLA-QVPEAELREL-GLGYRARFIRETASLLLERGGADWLVEQRGRPREDVQAALVELSGVGRKVADCVALFSLDQPATIPVDVHVWQIACRDYDPSLHEAKSLTPAVYGRVGDLFRARFGAHAGWAHSVLFAAELPVFRALLPDVLQERMVAFRLVEREKSAQKKEEQ 360
BLAST of mRNA_H-paniculata_contig1107.692.1 vs. uniprot
Match: A0A836CFH2_9STRA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFH2_9STRA) HSP 1 Score: 296 bits (758), Expect = 5.970e-91 Identity = 183/380 (48.16%), Postives = 223/380 (58.68%), Query Frame = 1
Query: 196 DVWIGVIGSKVVAIRQTPSSTLFKVLNPGGLDGQRNGIFGTAATTGAEDGIAATLRDYFFLEEPLTPLYKRWSKGDPRMAVVAKCIPGVRVVRQDPVECLFSFICSSNNNIPRITLMLHKLRRTYGKLELSVGKGGLVGMGILEDEAE--------------CENWAREPLDFHSFPSAEVLAARAKEADLRTLA----------------GFGYRAKFIVDTARLVV--EGGGREWALAMRT---KDRDTV-RNQLVTLSGVGPKVADCVALFSLDQSSVIPVDVHVWRIACRDFDASLTGCKSLTPTVYSRVGKLFRNRFGPHAGWAHSLLFAA------------ELPHCKVLLPPEMQREMDDFRREEKDSKTTAK 1191
DVW+GV+G V+AIRQ P +TL+K L G AA A D +A TLRDYF L PL LY W D R+A +A + GVRV+RQ+PVECL SFICSSNNNI RI+LML +LRR YG L+ ++ + A+ + + LDF SFPS E LA A E +LR LA G+GYRA +IV + + EGGG W LA+R+ D DTV R +L L GVGPKVADC+ALF+LDQS IPVDVHVWRIACRD+DASL KSLTPT+Y RVG+LF+ RFG HAGWAHSLLFA LP +VLLP ++ EM F+ +EK+ K AK
Sbjct: 2 DVWVGVLGRSVLAIRQLPHTTLYKWLG------------GDAAE--AHD-MATTLRDYFQLTHPLADLYGVWGAADSRLAQIAAVLCGVRVLRQEPVECLISFICSSNNNISRISLMLDRLRRKYGTHLLTTDSASILEATAADASADSTCTTVDGESNGSLADADGPQQLDFFSFPSLEQLA-EASEKELRDLATRIMAAPPASSAPRTSGYGYRAGYIVASVAYLNAREGGGEAWLLALRSLTGSDSDTVVRAELCQLKGVGPKVADCIALFALDQSGAIPVDVHVWRIACRDYDASLRLAKSLTPTIYQRVGELFKQRFGQHAGWAHSLLFAGGKCNRRTHYVMNALPAFQVLLPDALRAEMKAFKAQEKEWKDAAK 365
BLAST of mRNA_H-paniculata_contig1107.692.1 vs. uniprot
Match: A0A1E7FF99_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FF99_9STRA) HSP 1 Score: 291 bits (746), Expect = 2.200e-90 Identity = 170/401 (42.39%), Postives = 223/401 (55.61%), Query Frame = 1
Query: 97 TNGWVDLNVPPEELRPAVSLTIGQCFNWRQATPDV------------------WIGVIG--------SKVVAIRQTPSSTLFKVLNPGGLDGQRNGIFGTAATTGAEDGIAATLRDYFFLEEPLTPLYKRWSKGDPRMAVVAKCIPGVRVVRQDPVECLFSFICSSNNNIPRITLMLHKLRRTYGKLELSVGKGGLVGMGILEDEAECENWAREPLDFHSFPSAEVLAARAKEADLRTLAGFGYRAKFIVDTARLVVEGGG--------REWALAMRT-----KDRDTVRNQLVTLSGVGPKVADCVALFSLDQSSVIPVDVHVWRIACRDFDAS---LTGCKSLTPTVYSRVGKLFRNRFGPHAGWAHSLLFAAELPHCKVLLPPEMQREMDDFRREEKD 1173
T G++DLNVPPEELRP+ +LT GQCF+W+ P W+G + S +V IR+TP++TL++ L + L DYF LE L LY+ WS PR+AV+AKCIPGVR+++QDP ECL SFICSSNNNIPRI ML +RR YG+ L++ + G + + ++ F+SFPS E L ++A E DLR+ G GYRA +I++T +++++ G + + +R KD ++ +L GVG KVADCVALFSL IPVD HVW IA RD+D T KSLTPT Y VG FR F AGWAHSLLF AELP + LLP + +EMDDFR EEK+
Sbjct: 8 TQGFIDLNVPPEELRPSNTLTTGQCFHWKVVHPTTIKNASMPISAWGTHDATEWVGTLRLRLFDSTESIIVVIRETPTTTLYRPLTT-------IPTXXXXXXXXXXXXLRRALLDYFQLETSLPELYEEWSLNCPRLAVIAKCIPGVRIIKQDPWECLISFICSSNNNIPRIHKMLANIRREYGRPLLTISTIDIDGDNENDQATTIQ---QQYYQFYSFPSLEELFSQANEKDLRSKCGMGYRADYIMETMKILLQRNGDDDDNQSNQRGEIYLRDVLSNIKDPTELQTKLCEFKGVGRKVADCVALFSLRGDECIPVDTHVWNIAIRDYDTDGILKTNVKSLTPTNYKLVGDTFRTIFPNRAGWAHSLLFVAELPSFRGLLPTYITKEMDDFRNEEKE 398
BLAST of mRNA_H-paniculata_contig1107.692.1 vs. uniprot
Match: A0A7S2WTD5_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTD5_9STRA) HSP 1 Score: 289 bits (740), Expect = 2.410e-89 Identity = 164/335 (48.96%), Postives = 211/335 (62.99%), Query Frame = 1
Query: 223 KVVAIRQTPSSTLFKVLN-----PGGLDGQRNGIFGTAATTGAEDGIAATLRDYFFLEEPLTPLYKRWSKGDPRMAVVAKCIPGVRVVRQDPVECLFSFICSSNNNIPRITLMLHKLRRTYGK----LELSVGKGGLVGMGILEDEAECENWAREPLDFHSFPSAEVLAARAKEADLRTLAGFGYRAKFIVDTARLVVEGGGREWALAMRTKD--RDTVRNQLVTLSGVGPKVADCVALFSLDQSSVIPVDVHVWRIACRDFDASLTGCKSLTPTVYSRVGKLFRNRFGPHAGWAHSLLFAAELPHCKVLLPPEMQREMDDFRREEKDSKTTAKA 1194
+VV++R+T S+TLF LN PG L+G+ LRDYF L EPL PLY WS D R+AV+A +PG+RV+RQ+PVECLFSFI SSNNNI RI L+L++LR+ YG LE S G + + + A ++FPS A A E +LR L G GYR+++I++TA+ + E GG W A+R ++ R + +LV SGVG KVADCVALFSLD++ VIPVD HVW+IA RD DASL KS+TP +Y RVG LFR R+G AGWAHSLLFAAELP + LP +Q+EM++FR EK+ K AKA
Sbjct: 2 RVVSLRETTSTTLFACLNRPDEDPGELEGE--------------------LRDYFQLAEPLVPLYSAWSSADERLAVIADRLPGLRVLRQEPVECLFSFIISSNNNIARIQLILNRLRQRYGDPLMVLESSQAPGRSLDSPSAKPTTKTALVAAGSQPLYAFPSIAAFAG-ASEQELRDL-GLGYRSRYIIETAKKLQELGGEPWLSALRRQEISRAEAQQELVQFSGVGQKVADCVALFSLDKADVIPVDTHVWQIAVRDMDASLKDAKSITPAIYERVGDLFRERYGARAGWAHSLLFAAELPSLRKYLPENLQQEMEEFRLAEKERKKQAKA 314 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1107.692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1107.692.1 >prot_H-paniculata_contig1107.692.1 ID=prot_H-paniculata_contig1107.692.1|Name=mRNA_H-paniculata_contig1107.692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=461bp MDRDQKHGIALNHGDSTNGWVDLNVPPEELRPAVSLTIGQCFNWRQATPDback to top mRNA from alignment at H-paniculata_contig1107:786..6452+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1107.692.1 ID=mRNA_H-paniculata_contig1107.692.1|Name=mRNA_H-paniculata_contig1107.692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5667bp|location=Sequence derived from alignment at H-paniculata_contig1107:786..6452+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1107:786..6452+ >mRNA_H-paniculata_contig1107.692.1 ID=mRNA_H-paniculata_contig1107.692.1|Name=mRNA_H-paniculata_contig1107.692.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2766bp|location=Sequence derived from alignment at H-paniculata_contig1107:786..6452+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |