mRNA_H-paniculata_contig11062.690.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig11062.690.1 vs. uniprot
Match: D7FKU0_ECTSI (Putative serine rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU0_ECTSI) HSP 1 Score: 197 bits (501), Expect = 6.910e-54 Identity = 88/118 (74.58%), Postives = 105/118 (88.98%), Query Frame = 3 Query: 111 AKVPRTAQYGCNCRGAGGNGGCGEFDIIEAVIGGDYSDMLLTTVYDFKGTGAPGHDKYFLRPSVPTHFAAIFRGGQNAYLQVVQLKDWDYTQKSISGTFLDELHAASAENHEIYDVPA 464 +KV RTAQYGCNCRGAGGNGGCGEFDI+EAVIG D++DM+ TTVYDFKGTGAPGH KYF RPS P H+AAIFRGG++AYLQVVQL ++DY+Q ++SG +LD+L AS ENH++YDVPA Sbjct: 597 SKVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDHADMMFTTVYDFKGTGAPGHGKYFNRPSSPAHYAAIFRGGEDAYLQVVQLTEFDYSQTTLSGLWLDDLKLASTENHDVYDVPA 714
BLAST of mRNA_H-paniculata_contig11062.690.1 vs. uniprot
Match: D8LG92_ECTSI (F5/8 type C domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG92_ECTSI) HSP 1 Score: 114 bits (284), Expect = 3.590e-24 Identity = 58/120 (48.33%), Postives = 72/120 (60.00%), Query Frame = 3 Query: 108 NAKVPRTAQYGCNCRGAGGNGGCGEFDIIEAVIGGDYSDMLLTTVYDFKGTGAPGHDKYFLRPSVPTHFAAIFRGGQN---AYLQVVQLKDWDYTQKSISGTFLDELHAASAENHEIYDV 458 +A + RTAQYGCNCRGAGGNGGCGEFDIIE ++G YSDML TT T +AAIFRG +YLQV QL WD+T +S++ + LD++ + E H IY V Sbjct: 486 DATILRTAQYGCNCRGAGGNGGCGEFDIIEGIVGNKYSDMLFTTE--------------------KTTYAAIFRGNSGDSESYLQVAQLDGWDFTAESLTASELDKMKGSEEETHPIYSV 585
BLAST of mRNA_H-paniculata_contig11062.690.1 vs. uniprot
Match: A0A401GFD8_9APHY (Cell wall protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GFD8_9APHY) HSP 1 Score: 109 bits (273), Expect = 1.130e-23 Identity = 60/142 (42.25%), Postives = 83/142 (58.45%), Query Frame = 3 Query: 3 GADGTKVMVFEVDMPHCGQEGFKQCTYDRPAVWALNAKVPRTAQYGCNCRGAGGNGGCGEFDIIEAVIGGDYSDMLLTTVYDFKGTGAPGHDKYFLRPSVPTHFAAIFRGGQNAYLQVVQLKDWDYTQKSISGTFLDELHAA 428 G G+K+ VF +DMP D PAVW LNA+V R AQYGCNCRG GGNGGCGE DI+E V+ G + ++ +Y F G G + F RPS + + AIF ++ + + QL +WDY+ SI+ + ++ AA Sbjct: 201 GWKGSKMFVFTLDMPASDNAA------DVPAVWVLNAQVVRAAQYGCNCRGMGGNGGCGELDILE-VLSGSSPNQAISELYSFMGATGSGGES-FARPSSASTYTAIFDIDTDS-IAIQQLTEWDYSTPSITRSLIEGYLAA 333
BLAST of mRNA_H-paniculata_contig11062.690.1 vs. uniprot
Match: UPI0004416550 (hypothetical protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004416550) HSP 1 Score: 109 bits (272), Expect = 1.700e-23 Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = 3 Query: 12 GTKVMVFEVDMPHCGQEGFKQCTYDRPAVWALNAKVPRTAQYGCNCRGAGGNGGCGEFDIIEAVIGGDYSDMLLTTVYDFKGTGAPGHDKYFLRPSVPTHFAAIFRGGQNAYLQVVQLKDWDYTQKSISGTFLDELHAASAE 437 G+K+ VFE DMP PA+WALN +V R+AQYGCNCRG GG GGCGE D++E ++ D++ + + +Y FKG G YF RP+ + + + + + WD+TQK+++ + +D + +A+ Sbjct: 208 GSKMFVFEFDMPSDSDSV-------TPAIWALNGQVVRSAQYGCNCRGEGGEGGCGEIDLVENLVDADHNQGI-SEIYSFKGATGTGTGNYFARPTTEKAVFGVIFDVKTDQITIQKWSSWDFTQKAVTRSIIDGYLSTTAK 341
BLAST of mRNA_H-paniculata_contig11062.690.1 vs. uniprot
Match: A0A165D0F9_9APHY (Uncharacterized protein n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165D0F9_9APHY) HSP 1 Score: 106 bits (265), Expect = 1.060e-22 Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 3 GADGTKVMVFEVDMPHCGQEGFKQCTYDRPAVWALNAKVPRTAQYGCNCRGAGGNGGCGEFDIIEAVIGGDYSDMLLTTVYDFKGTGAPGHDKYFLRPSVPTHFAAIFRGGQNAYLQVVQLKDWDYTQKSISGTFLDELHAAS 431 G G+K++V DMP PA+WALNA+V R AQYGCNCRG GG+GGCGE D++E + D + ++ +Y FKG G +YF RP+ + A+ + + + +L +WDYT +I+ + + AS Sbjct: 174 GWTGSKMIVMTFDMPDSDGANI-------PAIWALNAQVVRAAQYGCNCRGEGGDGGCGELDVLEVLANSD-TTQAISEIYSFKGATGTGSAEYFARPTSSSATWAVIFDVETDAITITELTEWDYTTTAITRSLVSGYLDAS 308
BLAST of mRNA_H-paniculata_contig11062.690.1 vs. uniprot
Match: A0A1X6MZQ9_9APHY (Uncharacterized protein n=2 Tax=Postia placenta TaxID=104341 RepID=A0A1X6MZQ9_9APHY) HSP 1 Score: 104 bits (260), Expect = 7.150e-22 Identity = 55/143 (38.46%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 3 GADGTKVMVFEVDMPHCGQEGFKQCTYDRPAVWALNAKVPRTAQYGCNCRGAGGNGGCGEFDIIEAVIGGDYSDMLLTTVYDFKGTGAPGHDKYFLRPSVPTHFAAIFRGGQNAYLQVVQLKDWDYTQKSISGTFLDELHAAS 431 G G+K+MV +MP + PA+WALNA+V R AQYGCNCRG GGNGGCGE DI+E + G D D ++ +Y FKG G F RP+ + Q+ + + Q +WD+TQ ++ + ++ AS Sbjct: 197 GWSGSKLMVLTFNMPPSSDAS------NVPAIWALNAQVVRAAQYGCNCRGEGGNGGCGELDILEVIAGSDI-DNAISEIYSFKGATGSGASA-FPRPTGDDVTYGVIFDVQSDTIAIQQFTEWDFTQNAVPRSIIEGYLGAS 331
BLAST of mRNA_H-paniculata_contig11062.690.1 vs. uniprot
Match: A0A371D7V1_9APHY (Uncharacterized protein n=2 Tax=Polyporus TaxID=5637 RepID=A0A371D7V1_9APHY) HSP 1 Score: 103 bits (256), Expect = 2.530e-21 Identity = 55/142 (38.73%), Postives = 81/142 (57.04%), Query Frame = 3 Query: 15 TKVMVFEVDMPHCGQEGFKQCTYDRPAVWALNAKVPRTAQYGCNCRGAGGNGGCGEFDIIEAVIGGDYSDMLLTTVYDFKGTGAPGHDKYFLRPSVPTHFAAIFRGGQNAYLQVVQLKDWDYTQKSISGTFLDE-LHAASAE 437 +K++V +MP PA+WALNA+V RTA+YGCNCRG G GGCGE DI+E +IG D ++ + + +Y FKG G++ +F RP+ A+ Q + + L WDY KS+ + +D L+AA+ E Sbjct: 203 SKMLVVTFNMPASADAS------KVPAIWALNAQVVRTAEYGCNCRGIGSPGGCGELDILETLIGADPNNGI-SEIYSFKGATGSGNNNFFARPTGDKVTYAVVLDEQTDSIAIQHLTGWDYGSKSVPRSTIDGYLNAAALE 337
BLAST of mRNA_H-paniculata_contig11062.690.1 vs. uniprot
Match: A0A2H3J137_WOLCO (Uncharacterized protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3J137_WOLCO) HSP 1 Score: 103 bits (256), Expect = 2.530e-21 Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 3 Query: 15 TKVMVFEVDMPHCGQEGFKQCTYDRPAVWALNAKVPRTAQYGCNCRGAGGNGGCGEFDIIEAVIGGDYSDMLLTTVYDFKGTGAPGHDKYFLRPSVPTHFAAIFRGGQNAYLQVVQLKDWDYTQKSISGTFLD 413 +K+ VF DMP PA+WALNA+V R+AQYGCNCRG G NGGCGE DI+E VI D D ++ +Y FKG G + + ++ +F + L + +L +WDYTQ +++ + ++ Sbjct: 202 SKMFVFTFDMPSSSDAS------QLPAIWALNAQVVRSAQYGCNCRGEGANGGCGELDILE-VISADTPDQAISEIYSFKGATGSGANTFARPTGASATYSVVFDVDSDQIL-INELTEWDYTQTAVTRSLVE 326
BLAST of mRNA_H-paniculata_contig11062.690.1 vs. uniprot
Match: A0A165PHX7_9AGAM (Uncharacterized protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165PHX7_9AGAM) HSP 1 Score: 102 bits (255), Expect = 3.720e-21 Identity = 51/141 (36.17%), Postives = 78/141 (55.32%), Query Frame = 3 Query: 15 TKVMVFEVDMPHCGQEGFKQCTYDRPAVWALNAKVPRTAQYGCNCRGAGGNGGCGEFDIIEAVIGGDYSDMLLTTVYDFKGTGAPGHDKYFLRPSVPTHFAAIFRGGQNAYLQVVQLKDWDYTQKSISGTFLDELHAASAE 437 +K+ + EV+MP G PA+WALNA++ R+AQYGCNCRG G +GGCGE D++E + G D + ++ VY FKG G YF RP+ A+ + + + Q +D++ S+S + +D AS + Sbjct: 206 SKMFIMEVEMPSGGSTP--------PAIWALNAQIVRSAQYGCNCRGVGADGGCGELDVVEVISGQD-QNQGISEVYSFKGATGTGSSAYFTRPTSGAAVYAVIFDVKTDQIAIQQWPSFDFSTSSVSRSQIDGYLTASGK 337
BLAST of mRNA_H-paniculata_contig11062.690.1 vs. uniprot
Match: A0A4S4LVY0_9APHY (Uncharacterized protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4LVY0_9APHY) HSP 1 Score: 101 bits (252), Expect = 9.430e-21 Identity = 53/134 (39.55%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 12 GTKVMVFEVDMPHCGQEGFKQCTYDRPAVWALNAKVPRTAQYGCNCRGAGGNGGCGEFDIIEAVIGGDYSDMLLTTVYDFKGTGAPGHDKYFLRPSVPTHFAAIFRGGQNAYLQVVQLKDWDYTQKSISGTFLD 413 G+K VFE +MP G T + PA+W LN +V +AQYGCNCRG GG+GGCGE D+ E + + +T +Y FKG G ++ RPS + AI Q + + QL+ WD+TQ I+ + +D Sbjct: 205 GSKAFVFEFEMPQDG-------TSNPPAIWLLNQQVVNSAQYGCNCRGMGGSGGCGELDLFEVL--NTNLNQGITEIYSFKGATGSGDGNFWPRPSGIVTYIAIL-DIQTDSISIQQLQSWDFTQTQITRSIVD 328 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11062.690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11062.690.1 >prot_H-paniculata_contig11062.690.1 ID=prot_H-paniculata_contig11062.690.1|Name=mRNA_H-paniculata_contig11062.690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp MVFEVDMPHCGQEGFKQCTYDRPAVWALNAKVPRTAQYGCNCRGAGGNGGback to top mRNA from alignment at H-paniculata_contig11062:868..3998+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11062.690.1 ID=mRNA_H-paniculata_contig11062.690.1|Name=mRNA_H-paniculata_contig11062.690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3131bp|location=Sequence derived from alignment at H-paniculata_contig11062:868..3998+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11062:868..3998+ >mRNA_H-paniculata_contig11062.690.1 ID=mRNA_H-paniculata_contig11062.690.1|Name=mRNA_H-paniculata_contig11062.690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig11062:868..3998+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |