Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 3 |
Model size | 1472 |
Cds size | 1122 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1106.688.1 >prot_H-paniculata_contig1106.688.1 ID=prot_H-paniculata_contig1106.688.1|Name=mRNA_H-paniculata_contig1106.688.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=374bp
MKTPFFPNTDISSMPQAMEALRIVVVSGFPRRNELESTCLTLANACREGA RCSLLMAALSPPSLLRSLMPEFGQGGSGIGGEGRRSTTPPVASRISRHGM VRRLRIEGNFDLRLVHWPGGLTEVVFAGEFNQGLRGVRWPSGVVKLESVG VFDMPLHHPVTSLLPYEESVLPPNLKELVLGGNFNRNIDKVYFPPTLESI KLGSAEDGFLDSDDEDGEAAAVAGESVGSRNDDDDDYPDEPSFNRPILKA TWPTNLKRLEFGSRFNKPVEGAKFPDSLEEISFGTRFDQPIVGVKWPAEL RRLRLGEDFYQDLKEVFWPGKLEEIIFWGDLDYPILSVEDVMDVVWPDSM RKLIFSWAGRSIVHTCLVGDSGR* back to topmRNA from alignment at H-paniculata_contig1106:17812..21695- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1106.688.1 ID=mRNA_H-paniculata_contig1106.688.1|Name=mRNA_H-paniculata_contig1106.688.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3884bp|location=Sequence derived from alignment at H-paniculata_contig1106:17812..21695- (Halopteris paniculata Hal_grac_a_UBK monoicous) CAAAAATTAGCGACATCACCACACAGCGAGCTCTATCGCAATGTATACAT
AGGTGAGAGTTGGCCATGTTGCATATCCTGTTTTATGTTATCTGTGTATT
TGTATTTGGGCCATTTCTTCAGCAGCAGATTCGCTTCTCGCACGTACTGT
CTCTTCTCTGTCAGTTTGGTGTTGTTGTTCTTTCTGTTTGTGACTTATTG
TTTATCTGCCTGAGAGCACCAATGGGACGTCGAAGACCGACACAATAATA
GCGAGTTGAGGTGAAGTTTTTTCACGGCGCAGATATTAGATATCAGATAC
TGACAAAACTCGATCGCCCAGATGGTGGGGATGATACATGTGGCTTTTGG
GCTCAGTCACCCCCATCATCCGATGGGGCATGGTGTATGTACTATACTAA
AATTCACCATATGCCGTTGGCGCTTGCTAGTCCAGCCTTGATGCGTTCAC
CTCTCACTGTGCTTGTCAAGTCCCTGGCTCGATAGCAGCGAGTATGGACG
CTCTATAGCACGGTACGGTCAGTGTAGTCAGTACGGATGATAACTGGATC
TCCCTTTTTTGCGCCTGTATAATATTATGATAAAACTGTCTGAATAAGTC
TGAATGCAATACGGGGCATGGCCCAAATGGGACGCGTTGCCCGCTACCCA
AGATTCTTGGATTCATGACTCATCATTTATCTACGGAAAATATCCCAAAG
TGTAGGAAATAAGATATATATCGTACCTTCTGCTGGAGAATCACGGGTGT
GTCAGCGTCTCTTGACTGCATTAGCCACACAGCATCCACCTTCGATGGAC
CCACTTGATGCGTACTCGAGATGTCGACCCAAATTTTCGTCCAATCAAGC
TAACAGGGGTTGCAATAAATAACGAATAATATACTTATCGACTAATGGTG
AAAGTGCGGCAGCTTTTACCGAGCAGTCAACGATACAAGGCTCGTCAGAT
ATCGCATGCTCTTTCAAGACCCGATATGCCGCAGTCCAGAACTGTGAAAA
GCCCGACGTTTCTCCCCTCCCCACCACCCCAGCGCCGCAAGCTCCGCTCC
AGGTCCAGCCTAATCACAAATGAAAACGCCCTTCTTCCCAAACACCGACA
TCAGTAGTATGCCACAGGCAATGGAGGCCCTGAGGATCGTCGTTGTGTCT
GGATTTCCCCGACGCAACGAGCTCGAGTCTACGTGCCTAACCCTGGCCAA
CGCATGTCGCGAGGGCGCACGTTGCTCGCTTTTGATGGCAGCTCTTTCCC
CGCCAAGCCTATTGCGCTCTCTTATGCCCGAATTTGGGCAGGGCGGCAGC
GGTATCGGCGGTGAGGGTAGGAGGTCTACTACTCCTCCGGTCGCTTCGCG
GATTTCACGGCATGGCATGGTCCGGCGCCTGCGTATAGAGGGAAATTTTG
ATCTTCGCCTGGTGCACTGGCCAGGAGGTCTCACAGAAGTCGTATTTGCG
GGCGAGTTCAATCAGGGTTTGCGGGGTGTGCGGTGGCCGAGTGGAGTTGT
CAAGCTGGAAAGCGTGGGGGTGTTCGATATGCCTCTTCACCACCCCGTTA
CAAGCTTGCTGCCGTATGAGGAGAGTGTTCTTCCACCCAACCTGAAAGAG
CTCGTCCTGGGCGGAAACTTCAACCGGAACATCGACAAAGTCTATTTCCC
GCCGACACTGGAATCGATAAAGCTAGGAAGCGCAGAAGATGGTTTTCTGG
ATTCAGACGATGAAGATGGCGAAGCTGCTGCTGTTGCTGGTGAATCCGTC
GGCTCTAGAAATGATGATGATGATGACTATCCTGACGAGCCGAGCTTCAA
CCGTCCCATCTTAAAGGCGACGTGGCCCACAAATCTTAAGAGACTCGAAT
TTGGTAGCCGCTTCAACAAGCCGGTGGAAGGGGCCAAGTTTCCGGATAGC
CTAGAGGAGGTGAGTTGATTCTTTGTCATCAAACGTAAATAATCAGACAT
ATTTTTGCCATGAATATTTAGGGTTTTTTGCCTGTCCGGTGGCCAGACAG
GTAGTCCTCGACGCAGGAAGCGACTTTTCGGGGTAATTTGTTGCGTTTCG
GAAAAAGAAAAAGTCCGTTGATACATTTTTTTACTATTGGAACATATATA
TGTTCTGCTTGGGTAAGTTTTTGTTACTGTTTAGGGGTATTGCGGTTGCG
GTTCGGGACATGAGTTTGTGGTGAGGCAACTAAAGCCGGTGGCAGCCACT
GGGTGCCACTGGTCTGGCCAACCAGCGACCGTCCAAATTACCACCGGACC
AACCAGCTGCCGAAGTGAGAACTGACCTGTTGATGGCGGCTGACCGTGGA
TAGGTTTGCCGGACAGGTTCAACTTCAGGGCATTGTGTAGAGCCTTGCAA
ATATTCTCGTAGAATCGGCCGACAATAGTCCTACAGGTAGGTTTCGCGAT
CAGGTCTTCAGTATCCGAAAGCAGGAAATTGTACGGACGCGTTGAAATCG
TACAGCTAAGTACGTATTGAACCAACGTGAATCCGAAATTGTTGCTTGTT
TTCGCAAGCCGTTGGGCACATAGCTTGGGGGAAGGTACGTACTTCTTGCA
ATGTACAATCATGCCTCTCGTGTGAGGAGCTGGTATAATACGTGCACCAA
GAGGAAACAGATTAATTGCTTCATCCAGACATGTCCTAATTATACTGTGC
TGTTATGTAGTGTACTATACGTACGTATAGTTGGCGTAAGTCGCAGCACC
GTGGTAACGTGAGAACGTGAGAGCAACCCTTGAGGCATGGATAATTGAAG
AGTTCCATCGGCTGGCAAAACACCGTTTTGCTCGTAATTTGGCTGGGACC
GGGCCTCCCCTTGACTGTGATAACGTGCCGTCTTGTCTTTTCGGCGTGGA
GATGCCATCCTGCATAGGTGTATTGGAACACCATCGACTGCTGTTCATGG
TGTTCAACTGCTGTTCACGGTTTGCAACTATATAATCTAACGGCTACACT
ACACAAATTGATTTTTAGAAATATTTGTTGAGAAAAATCAGACTCGATTT
TTCGGGTCCTTAAAGGCTTTGCTTCAGAAACTCTGCTTGCTCCCTTGGTG
CCCAGACTTCTTCCTATGTACCGGTAAGGAAAGTATTACTCGAAAAAAAG
AGGTCTTTGTCTCGGGTCAGGCCGTATATCTAAGTCGTGAGGCTCATGAT
GACATCGTGTAAGAAGTGTCTGATCGTGTTGAGCCCCACGACTTATAAAT
TATTGATCGCATGCTGGCGCTAGCTGGTCCCAGGGTTCGATTTCAGTCAT
CTGTAATTTGCAAATAGGCGTCTCTTACATCATGTCATTATTTACTACTG
GCACCCACTTTTTCCCTCCATCTGCTCTCATTCCCCGTCAGATCTCCTTT
GGCACTAGGTTCGACCAACCCATTGTTGGAGTCAAATGGCCTGCCGAGCT
CCGACGTCTACGTCTTGGCGAAGACTTTTATCAGGATCTCAAAGAAGTAT
TCTGGCCTGGAAAGTTAGAGGAGATAATCTTCTGGGGTGATCTGGACTAT
CCCATCCTGAGTGTTGAGGACGTGATGGACGTTGTTTGGCCGGACAGTAT
GCGAAAGCTCATTTTTAGTTGGGCGGGCCGGTCGATTGTACACACATGTT
TGGTTGGGGACAGTGGTCGTTGACACAGATTCGCTACTCAAGACGTCGAA
GCATTGTAAGCGCTGAGTTGTTTTACAAAACATGGAGTAATGGAACAGGT
CCATGTAGCGTCCTGTATGTGCTATGTATGGTTTCCTCCATTGCAGCTAC
TGGCACATATTAATATTAATAGCATTACAGTTTGCTGCTGTATGAGGAAA
TAAACCGATTGATTCACCTCCCTATAGGCCGTCATTTCGCACAGAGTGGT
ATTTGTCAGCTGTGACAAATCAGGCATTGCGAAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1106:17812..21695- >mRNA_H-paniculata_contig1106.688.1 ID=mRNA_H-paniculata_contig1106.688.1|Name=mRNA_H-paniculata_contig1106.688.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2244bp|location=Sequence derived from alignment at H-paniculata_contig1106:17812..21695- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGAAAACGCCCTTCTTCCCAAACACCGACATCAGTAGTATGCCACAGGC AATGGAGGCCCTGAGGATCGTCGTTGTGTCTGGATTTCCCCGACGCAACG AGCTCGAGTCTACGTGCCTAACCCTGGCCAACGCATGTCGCGAGGGCGCA CGTTGCTCGCTTTTGATGGCAGCTCTTTCCCCGCCAAGCCTATTGCGCTC TCTTATGCCCGAATTTGGGCAGGGCGGCAGCGGTATCGGCGGTGAGGGTA GGAGGTCTACTACTCCTCCGGTCGCTTCGCGGATTTCACGGCATGGCATG GTCCGGCGCCTGCGTATAGAGGGAAATTTTGATCTTCGCCTGGTGCACTG GCCAGGAGGTCTCACAGAAGTCGTATTTGCGGGCGAGTTCAATCAGGGTT TGCGGGGTGTGCGGTGGCCGAGTGGAGTTGTCAAGCTGGAAAGCGTGGGG GTGTTCGATATGCCTCTTCACCACCCCGTTACAAGCTTGCTGCCGTATGA GGAGAGTGTTCTTCCACCCAACCTGAAAGAGCTCGTCCTGGGCGGAAACT TCAACCGGAACATCGACAAAGTCTATTTCCCGCCGACACTGGAATCGATA AAGCTAGGAAGCGCAGAAGATGGTTTTCTGGATTCAGACGATGAAGATGG CGAAGCTGCTGCTGTTGCTGGTGAATCCGTCGGCTCTAGAAATGATGATG ATGATGACTATCCTGACGAGCCGAGCTTCAACCGTCCCATCTTAAAGGCG ACGTGGCCCACAAATCTTAAGAGACTCGAATTTGGTAGCCGCTTCAACAA GCCGGTGGAAGGGGCCAAGTTTCCGGATAGCCTAGAGGAGATGAAAACGC CCTTCTTCCCAAACACCGACATCAGTAGTATGCCACAGGCAATGGAGGCC CTGAGGATCGTCGTTGTGTCTGGATTTCCCCGACGCAACGAGCTCGAGTC TACGTGCCTAACCCTGGCCAACGCATGTCGCGAGGGCGCACGTTGCTCGC TTTTGATGGCAGCTCTTTCCCCGCCAAGCCTATTGCGCTCTCTTATGCCC GAATTTGGGCAGGGCGGCAGCGGTATCGGCGGTGAGGGTAGGAGGTCTAC TACTCCTCCGGTCGCTTCGCGGATTTCACGGCATGGCATGGTCCGGCGCC TGCGTATAGAGGGAAATTTTGATCTTCGCCTGGTGCACTGGCCAGGAGGT CTCACAGAAGTCGTATTTGCGGGCGAGTTCAATCAGGGTTTGCGGGGTGT GCGGTGGCCGAGTGGAGTTGTCAAGCTGGAAAGCGTGGGGGTGTTCGATA TGCCTCTTCACCACCCCGTTACAAGCTTGCTGCCGTATGAGGAGAGTGTT CTTCCACCCAACCTGAAAGAGCTCGTCCTGGGCGGAAACTTCAACCGGAA CATCGACAAAGTCTATTTCCCGCCGACACTGGAATCGATAAAGCTAGGAA GCGCAGAAGATGGTTTTCTGGATTCAGACGATGAAGATGGCGAAGCTGCT GCTGTTGCTGGTGAATCCGTCGGCTCTAGAAATGATGATGATGATGACTA TCCTGACGAGCCGAGCTTCAACCGTCCCATCTTAAAGGCGACGTGGCCCA CAAATCTTAAGAGACTCGAATTTGGTAGCCGCTTCAACAAGCCGGTGGAA GGGGCCAAGTTTCCGGATAGCCTAGAGGAGATCTCCTTTGGCACTAGGTT CGACCAACCCATTGTTGGAGTCAAATGGCCTGCCGAGCTCCGACGTCTAC GTCTTGGCGAAGACTTTTATCAGGATCTCAAAGAAGTATTCTGGCCTGGA AAGTTAGAGGAGATAATCTTCTGGGGTGATCTGGACTATCCCATCCTGAG TGTTGAGGACGTGATGGACGTTGTTTGGCCGGACAGTATGCGAAAGCTCA TTTTTAGTTGGGCGGGCCGGTCGATTGTACACACATGTTTGGTTGGGGAC AGTGGTCGTTGAATCTCCTTTGGCACTAGGTTCGACCAACCCATTGTTGG AGTCAAATGGCCTGCCGAGCTCCGACGTCTACGTCTTGGCGAAGACTTTT ATCAGGATCTCAAAGAAGTATTCTGGCCTGGAAAGTTAGAGGAGATAATC TTCTGGGGTGATCTGGACTATCCCATCCTGAGTGTTGAGGACGTGATGGA CGTTGTTTGGCCGGACAGTATGCGAAAGCTCATTTTTAGTTGGGCGGGCC GGTCGATTGTACACACATGTTTGGTTGGGGACAGTGGTCGTTGA back to top
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