mRNA_H-paniculata_contig11052.685.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11052.685.1
Unique NamemRNA_H-paniculata_contig11052.685.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11052.685.1 vs. uniprot
Match: A0A8D0Z1H1_PIG (RL10P_insert domain-containing protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D0Z1H1_PIG)

HSP 1 Score: 442 bits (1136), Expect = 8.740e-150
Identity = 263/364 (72.25%), Postives = 281/364 (77.20%), Query Frame = 1
Query:    1 MPLSPQRKTWYFERLKELLDTHTKIFLVKADNVGSNQLAKIRFALRGTATVLMGKNTMMRKIISIYIKDHPGHPFEQLLAKVIGNVGFIFTNGDLGAVRDVIEEHRVPAPARVGSVAPIDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEIT--------------------------------TEVFLVPQGNKVGSSEAALLQK----LNIRPFTYGLTIDCIYDNGSVFDAAVLDLTDEDMTRKFAGACANVAAVSLELGFPTLASLPHSIVNAFRALVSVVIEGCDKYTFDECEPIKAYLADPSAFAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGGMSMFGAEEGGGGDY 984
            MPLSP+RKTWYFERLK LLD HTKIFLV+ADNVGS+Q+AKIRFALRGTATVLMGKNTM+RKIIS Y+KDHPGHPFE LL KV+GN+GFIFTNG+LGA+RDVIEEHRVPAPARVGSVAP DVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEIT                                  V +V +G    S   A   K    LNIRPFTYGL IDC+YDNGSVFDAAVLDLTD DM  KFA ACANVAAVSLELGFPTLASLPHSI NAFRA+V VVIEGC  Y+F + + +KA LADPSAFAA  XXXXXXXXXXXXXXXXXXXXXXX      MGG   MFG EE G GDY
Sbjct:    1 MPLSPERKTWYFERLKGLLDNHTKIFLVQADNVGSSQMAKIRFALRGTATVLMGKNTMIRKIISTYVKDHPGHPFELLLPKVVGNIGFIFTNGELGAIRDVIEEHRVPAPARVGSVAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITFAAACANVAAVSLELGFPTLASLPHSIANAFRAMVGVVIEGCSTYSFAQADTVKAILALNIRPFTYGLMIDCVYDNGSVFDAAVLDLTDADMANKFAAACANVAAVSLELGFPTLASLPHSIANAFRAMVGVVIEGCSTYSFAQADTVKAILADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXXEVD---MGGAGGMFGEEEAGDGDY 361          
BLAST of mRNA_H-paniculata_contig11052.685.1 vs. uniprot
Match: D8LP25_ECTSI (60S acidic ribosomal protein P0 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP25_ECTSI)

HSP 1 Score: 430 bits (1105), Expect = 2.930e-146
Identity = 242/291 (83.16%), Postives = 264/291 (90.72%), Query Frame = 1
Query:  112 LAKIRFALRGTATVLMGKNTMMRKIISIYIKDHPGHPFEQLLAKVIGNVGFIFTNGDLGAVRDVIEEHRVPAPARVGSVAPIDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPQGNKVGSSEAALLQKLNIRPFTYGLTIDCIYDNGSVFDAAVLDLTDEDMTRKFAGACANVAAVSLELGFPTLASLPHSIVNAFRALVSVVIEGCDKYTFDECEPIKAYLADPSAFAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGGMSMFGAEEGGGGDY 984
            +AKIR+ALRG+ATVLMGKNTM+RKIIS+++KD+PGHP E +L +V+GNVGFIFTNG+LG +RDVIE HRVPAPARVGS+APIDV VPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITT+VFLVP+G KVGSSEAALLQKL+IRPFTYGL IDC+YDNGSVFDAAVLDLTDEDM  KFA AC NVAAVSLELGFPTLASLPHSI NAFRALV VVIEGCD Y+FD+ + IKA LADPSAFAA+ XXXXXXXXXXXXXXXXXXXXXX       MGGGMSMFGAEEGGG DY
Sbjct:    1 MAKIRYALRGSATVLMGKNTMIRKIISVFLKDNPGHPLELILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSIAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDEDMGNKFAAACGNVAAVSLELGFPTLASLPHSIANAFRALVGVVIEGCDTYSFDQADTIKAILADPSAFAASXXXXXXXXXXXXXXXXXXXXXXXID-----MGGGMSMFGAEEGGG-DY 285          
BLAST of mRNA_H-paniculata_contig11052.685.1 vs. uniprot
Match: A0A835YRE1_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRE1_9STRA)

HSP 1 Score: 389 bits (998), Expect = 5.680e-130
Identity = 190/275 (69.09%), Postives = 231/275 (84.00%), Query Frame = 1
Query:    1 MPLSPQRKTWYFERLKELLDTHTKIFLVKADNVGSNQLAKIRFALRGTATVLMGKNTMMRKIISIYIKDHPGHPFEQLLAKVIGNVGFIFTNGDLGAVRDVIEEHRVPAPARVGSVAPIDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPQGNKVGSSEAALLQKLNIRPFTYGLTIDCIYDNGSVFDAAVLDLTDEDMTRKFAGACANVAAVSLELGFPTLASLPHSIVNAFRALVSVVIEGCDKYTFDECEPIKAYLADPS 825
            MPLS +RK WYF+RL+ELL +++KI LV+ DNVGS Q+A+IR ALRG A VL+GKNTM+RKI++ YIK +PGHP+E L+ +V GNVGFIFTNGDLG VR+VIEE+RVPAPARVG+VAP+DV VPPGPTGCDPGQTSFFQVLQ+PTKI KGQIEIT EV LV +G+KVG+SEA LL +L+IRPFTYGL I+ +YDNGS+F+AAVLDLTD+D+  +F GA  NVAA SL LG+PTLASLPHSI NAF+ALV+V ++ C   TF + EP K  L  P+
Sbjct:    1 MPLSAERKEWYFKRLEELLGSYSKILLVQCDNVGSRQMAQIRLALRGQAVVLLGKNTMIRKILTNYIKQNPGHPYENLIPRVRGNVGFIFTNGDLGKVREVIEENRVPAPARVGAVAPVDVFVPPGPTGCDPGQTSFFQVLQIPTKIAKGQIEITNEVHLVKKGDKVGNSEAVLLTRLSIRPFTYGLVIELVYDNGSIFEAAVLDLTDDDLRARFVGAVRNVAAASLALGYPTLASLPHSIANAFKALVAVAVQ-CPGVTFAQAEPFKKLLPAPA 274          
BLAST of mRNA_H-paniculata_contig11052.685.1 vs. uniprot
Match: K3WAY4_GLOUD (60S acidic ribosomal protein P0 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAY4_GLOUD)

HSP 1 Score: 380 bits (977), Expect = 2.030e-126
Identity = 186/281 (66.19%), Postives = 228/281 (81.14%), Query Frame = 1
Query:    1 MPLSPQRKTWYFERLKELLDTHTKIFLVKADNVGSNQLAKIRFALRGTATVLMGKNTMMRKIISIYIKDHPGHPFEQLLAKVIGNVGFIFTNGDLGAVRDVIEEHRVPAPARVGSVAPIDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPQGNKVGSSEAALLQKLNIRPFTYGLTIDCIYDNGSVFDAAVLDLTDEDMTRKFAGACANVAAVSLELGFPTLASLPHSIVNAFRALVSVVIEGCDKYTFDECEPIKAYLADPSAFAAAS 843
            M LS +RK  YF +L+ LLD +TKIFLV  DNVGSNQ+ +IR +LRG A +LMGKNT++RK+ S YIK +PGHP EQ++  + GNVGF+FTN DL  +R+V+E ++VPAPARVG+VAPIDV +PPGPTGCDPGQT+FFQ LQV TKI KGQIEI  EV L  +G KVG+SEA LLQKLNIRPFTYGL I  +YDNGS+FD AVLDLT++D+T KF     NVAAVSLE+GFPTLAS+PHS+ NAF+ LV+VV+E  D ++F + +P KAYLADPSAFAAA+
Sbjct:    1 MGLSQERKQEYFSKLENLLDNYTKIFLVGVDNVGSNQIQQIRISLRGRAEILMGKNTLIRKVFSNYIKKNPGHPLEQVIPLLKGNVGFVFTNQDLNQIREVLESNKVPAPARVGAVAPIDVIIPPGPTGCDPGQTAFFQALQVGTKIQKGQIEIINEVLLTKKGEKVGNSEAVLLQKLNIRPFTYGLVIQTVYDNGSIFDPAVLDLTEDDLTAKFVAGLRNVAAVSLEIGFPTLASIPHSVANAFKTLVAVVVE-LDSFSFAKADPYKAYLADPSAFAAAA 280          
BLAST of mRNA_H-paniculata_contig11052.685.1 vs. uniprot
Match: A0A4D9D366_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D366_9STRA)

HSP 1 Score: 377 bits (967), Expect = 7.550e-125
Identity = 186/273 (68.13%), Postives = 230/273 (84.25%), Query Frame = 1
Query:   19 RKTWYFERLKELLDTHTKIFLVKADNVGSNQLAKIRFALRGTATVLMGKNTMMRKIISIYIKDHPGHPFEQLLAKVIGNVGFIFTNGDLGAVRDVIEEHRVPAPARVGSVAPIDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPQGNKVGSSEAALLQKLNIRPFTYGLTIDCIYDNGSVFDAAVLDLTDEDMTRKFAGACANVAAVSLELGFPTLASLPHSIVNAFRALVSVVIEGCDKYTFDECEPIKAYLADPSAFAA 837
            +K  YFER++ELL ++TK+F+V  DNVGS Q+ +IR ALRGTATVLMGKNT +RK+++I++K +PGHP EQL+  V GNVGF+FTNGDLG+VR+ +EE+RVPAPARVGS+AP +V VPPGPTGCDPGQTSFFQ LQ+ TKITKGQIEITT V ++ +G+KVG+SEA LLQKLNI PFTYGL I  IYDNGS+FD  VLDLTD D+  KFA A  NVAA+SL+LG+PTLASLPHSI NAF+A V+V + G ++++F++ EP KAYL DPSAFAA
Sbjct:    8 KKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVAV-GLEEFSFEKAEPFKAYLKDPSAFAA 279          
BLAST of mRNA_H-paniculata_contig11052.685.1 vs. uniprot
Match: W7U6S0_9STRA (60s acidic ribosomal protein p0 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6S0_9STRA)

HSP 1 Score: 378 bits (971), Expect = 5.670e-124
Identity = 187/273 (68.50%), Postives = 231/273 (84.62%), Query Frame = 1
Query:   19 RKTWYFERLKELLDTHTKIFLVKADNVGSNQLAKIRFALRGTATVLMGKNTMMRKIISIYIKDHPGHPFEQLLAKVIGNVGFIFTNGDLGAVRDVIEEHRVPAPARVGSVAPIDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPQGNKVGSSEAALLQKLNIRPFTYGLTIDCIYDNGSVFDAAVLDLTDEDMTRKFAGACANVAAVSLELGFPTLASLPHSIVNAFRALVSVVIEGCDKYTFDECEPIKAYLADPSAFAA 837
            +K  YFER++ELL ++TK+F+V  DNVGS Q+ +IR ALRGTATVLMGKNT +RK+++I++K +PGHP EQL+  V GNVGF+FTNGDLG+VR+ +EE+RVPAPARVGS+AP +V VPPGPTGCDPGQTSFFQ LQ+ TKITKGQIEITT V ++ +G+KVG+SEA LLQKLNI PFTYGL I  IYDNGS+FD  VLDLTD D+  KFA A  NVAA+SL+LG+PTLASLPHSI NAF+A V+VV+ G ++++F++ EP KAYL DPSAFAA
Sbjct:  109 KKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVV-GLEEFSFEKAEPFKAYLKDPSAFAA 380          
BLAST of mRNA_H-paniculata_contig11052.685.1 vs. uniprot
Match: A0A6V2YPM3_HETAK (60S acidic ribosomal protein P0 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2YPM3_HETAK)

HSP 1 Score: 374 bits (959), Expect = 1.100e-123
Identity = 181/274 (66.06%), Postives = 229/274 (83.58%), Query Frame = 1
Query:   16 QRKTWYFERLKELLDTHTKIFLVKADNVGSNQLAKIRFALRGTATVLMGKNTMMRKIISIYIKDHPGHPFEQLLAKVIGNVGFIFTNGDLGAVRDVIEEHRVPAPARVGSVAPIDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPQGNKVGSSEAALLQKLNIRPFTYGLTIDCIYDNGSVFDAAVLDLTDEDMTRKFAGACANVAAVSLELGFPTLASLPHSIVNAFRALVSVVIEGCDKYTFDECEPIKAYLADPSAFAA 837
            ++K  YF R++ +++T+TK F+V  DNVGS+Q+ +IR ALRG A VLMGKNTMMRK+I+ ++K +PGHPFEQ+ AK+ GNVG +FTNGDLG VR  IEE+RVPAPARVGS+AP++V VPPGPTGCDPGQTSFFQVLQ+ TKI++GQIEI   V L+  G+KVG+SEAALLQKL+I+PFTYGL ID IYDNGS+FDA VLDLTD D+  KF  A + +A+V LE+G+PTLAS+PHSI NAF+ LV+V +E C+ ++F++ EP KAYLADPSAFAA
Sbjct:    4 EKKIEYFSRMEGMIETYTKCFIVGVDNVGSHQMQQIRLALRGEAEVLMGKNTMMRKVIAEFMKKNPGHPFEQISAKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVE-CETFSFEKAEPYKAYLADPSAFAA 276          
BLAST of mRNA_H-paniculata_contig11052.685.1 vs. uniprot
Match: A0A485KPX2_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPX2_9STRA)

HSP 1 Score: 369 bits (948), Expect = 5.030e-122
Identity = 177/280 (63.21%), Postives = 228/280 (81.43%), Query Frame = 1
Query:    1 MPLSPQRKTWYFERLKELLDTHTKIFLVKADNVGSNQLAKIRFALRGTATVLMGKNTMMRKIISIYIKDHPGHPFEQLLAKVIGNVGFIFTNGDLGAVRDVIEEHRVPAPARVGSVAPIDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPQGNKVGSSEAALLQKLNIRPFTYGLTIDCIYDNGSVFDAAVLDLTDEDMTRKFAGACANVAAVSLELGFPTLASLPHSIVNAFRALVSVVIEGCDKYTFDECEPIKAYLADPSAFAAA 840
            M +S +RK  YF +L+ LL+ +T+IF+V  DNVGSNQ+ +IR ALRGTA VLMGKNTM+RK+ + ++K +PGHP E ++  + GNVGF+FTN DLG VR+ +E ++VPAPARVG+VAPIDV  P GPTGCDPGQTSFFQ LQ+ TKI KGQIEI ++V L  +G KVG+SEAALLQKLNIRPF+YGL I  +YDNGS+FD AVLDLT+E++  KF G   NVAAVSL LGFPTLAS+PHS+ NAF++LV++ +E C+ ++F++ +P KA+LADPSAFA+A
Sbjct:    1 MGISMERKAEYFLKLENLLENYTRIFIVGVDNVGSNQIQQIRIALRGTAEVLMGKNTMIRKVFANFVKKNPGHPLETMIPLLKGNVGFVFTNADLGQVRETLEANKVPAPARVGAVAPIDVWCPAGPTGCDPGQTSFFQALQIGTKIQKGQIEIVSDVLLTKKGEKVGNSEAALLQKLNIRPFSYGLIIQSVYDNGSIFDPAVLDLTEENLVAKFVGGLRNVAAVSLALGFPTLASIPHSLANAFKSLVAIAVE-CESFSFEKADPFKAFLADPSAFASA 279          
BLAST of mRNA_H-paniculata_contig11052.685.1 vs. uniprot
Match: A0A0P6IAI3_9CRUS (60S acidic ribosomal protein P0 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6IAI3_9CRUS)

HSP 1 Score: 367 bits (943), Expect = 2.860e-121
Identity = 176/281 (62.63%), Postives = 223/281 (79.36%), Query Frame = 1
Query:    1 MPLSPQRKTWYFERLKELLDTHTKIFLVKADNVGSNQLAKIRFALRGTATVLMGKNTMMRKIISIYIKDHPGHPFEQLLAKVIGNVGFIFTNGDLGAVRDVIEEHRVPAPARVGSVAPIDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPQGNKVGSSEAALLQKLNIRPFTYGLTIDCIYDNGSVFDAAVLDLTDEDMTRKFAGACANVAAVSLELGFPTLASLPHSIVNAFRALVSVVIEGCDKYTFDECEPIKAYLADPSAFAAAS 843
            M LS +RK  YF +L+ LL+  TKIFLV  DNVGS+Q+ +IR  LRG A +LMGKNT+MRK+ S +IK +PGHP E  +  + GNVGF+FTN DL  +R+V+E ++VPAPARVG++AP+DV +P GPTGCDPGQTSFFQ L + TKI KGQIEI T+V +V QG KVG+SEAALLQKLNIRPF YGL I  +YDNGS+FD AVLDLT++D+  KFA    NVAA+SLE+GFPTLAS+PHS+ NAF+ LV++ +E C+ ++F + +P KAYLADPSAFA A+
Sbjct:    1 MGLSQERKLEYFTKLETLLENFTKIFLVNVDNVGSHQMQQIRLELRGRAELLMGKNTLMRKVFSNFIKKNPGHPLENFIPLLKGNVGFVFTNADLNQIREVVEGNKVPAPARVGAIAPVDVIIPAGPTGCDPGQTSFFQTLSIGTKIAKGQIEIVTDVLMVKQGEKVGNSEAALLQKLNIRPFAYGLVISQVYDNGSLFDPAVLDLTEDDLCAKFAAGLRNVAAISLEIGFPTLASIPHSVANAFKTLVAIAVE-CETFSFKKADPFKAYLADPSAFAVAA 280          
BLAST of mRNA_H-paniculata_contig11052.685.1 vs. uniprot
Match: D0NVM9_PHYIT (60S acidic ribosomal protein P0 n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NVM9_PHYIT)

HSP 1 Score: 367 bits (942), Expect = 4.190e-121
Identity = 207/328 (63.11%), Postives = 255/328 (77.74%), Query Frame = 1
Query:    1 MPLSPQRKTWYFERLKELLDTHTKIFLVKADNVGSNQLAKIRFALRGTATVLMGKNTMMRKIISIYIKDHPGHPFEQLLAKVIGNVGFIFTNGDLGAVRDVIEEHRVPAPARVGSVAPIDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPQGNKVGSSEAALLQKLNIRPFTYGLTIDCIYDNGSVFDAAVLDLTDEDMTRKFAGACANVAAVSLELGFPTLASLPHSIVNAFRALVSVVIEGCDKYTFDECEPIKAYLADPSAFAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGGMSMFGAEEGGGGDY 984
            M LS +RK  YF++L+ LL+ +TKIFLV  DNVGS Q+ +IR  LRG A VLMGKNT+MRK+ + ++K +PGHP E  +  + GNVGF+FTN DL  +R+V+E +RVPAPARVGS+AP+DV VPPGPTG DPGQTSFFQ LQ+ TKI KGQIEI TEV L  +G KVG+SEAALLQKL+I+PF+YGL I+ +YDNGS+FD AVLDLT+ D+  KF     NVAA+SLELG PTLAS+PHSI NAF+ LV++ +E C++++F++ EP KA+LADPSAFA A+   XXXXXXXXXXXXXXXXXX        MGGGM MFG   GG  DY
Sbjct:    1 MGLSQERKLEYFDKLESLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFNNFVKKNPGHPLELFIPLLKGNVGFVFTNDDLSEIREVLESNRVPAPARVGSIAPVDVIVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVTEVMLTRKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAMSLELGIPTLASIPHSIANAFKDLVAIAVE-CEEFSFEKAEPYKAFLADPSAFAVAAPAGXXXXXXXXXXXXXXXXXXVD------MGGGMDMFG---GGDEDY 318          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11052.685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D0Z1H1_PIG8.740e-15072.25RL10P_insert domain-containing protein n=1 Tax=Sus... [more]
D8LP25_ECTSI2.930e-14683.1660S acidic ribosomal protein P0 n=1 Tax=Ectocarpus... [more]
A0A835YRE1_9STRA5.680e-13069.0960S acidic ribosomal protein P0 n=1 Tax=Tribonema ... [more]
K3WAY4_GLOUD2.030e-12666.1960S acidic ribosomal protein P0 n=1 Tax=Globispora... [more]
A0A4D9D366_9STRA7.550e-12568.1360S acidic ribosomal protein P0 n=1 Tax=Nannochlor... [more]
W7U6S0_9STRA5.670e-12468.5060s acidic ribosomal protein p0 n=1 Tax=Nannochlor... [more]
A0A6V2YPM3_HETAK1.100e-12366.0660S acidic ribosomal protein P0 n=2 Tax=Heterosigm... [more]
A0A485KPX2_9STRA5.030e-12263.2160S acidic ribosomal protein P0 n=1 Tax=Aphanomyce... [more]
A0A0P6IAI3_9CRUS2.860e-12162.6360S acidic ribosomal protein P0 n=1 Tax=Daphnia ma... [more]
D0NVM9_PHYIT4.190e-12163.1160S acidic ribosomal protein P0 n=16 Tax=Peronospo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11052contigH-paniculata_contig11052:2066..5494 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score434.5
Seed ortholog evalue4.4e-119
Seed eggNOG ortholog2880.D8LP25
Preferred nameRPP0
KEGG koko:K02941
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006950,GO:0006970,GO:0008150,GO:0009266,GO:0009409,GO:0009506,GO:0009507,GO:0009536,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009735,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0030054,GO:0031974,GO:0031981,GO:0032991,GO:0034059,GO:0036293,GO:0042221,GO:0042788,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0046686,GO:0046872,GO:0046914,GO:0048046,GO:0050896,GO:0055044,GO:0070013,GO:0070482,GO:0071944,GO:1990904
EggNOG free text desc.ribosome biogenesis
EggNOG OGsCOG0244@1,KOG0815@2759
Ec32 ortholog descriptionRibosomal protein L10/acidic P0
Ec32 orthologEc-06_006850.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons6
Model size1565
Cds size987
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928812.9442742-UTR-H-paniculata_contig11052:2065..26431622928812.9442742-UTR-H-paniculata_contig11052:2065..2643Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11052 2066..2643 -
1691480629.7814221-UTR-H-paniculata_contig11052:2065..26431691480629.7814221-UTR-H-paniculata_contig11052:2065..2643Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11052 2066..2643 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928812.9641345-CDS-H-paniculata_contig11052:2643..28261622928812.9641345-CDS-H-paniculata_contig11052:2643..2826Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 2644..2826 -
1691480629.79493-CDS-H-paniculata_contig11052:2643..28261691480629.79493-CDS-H-paniculata_contig11052:2643..2826Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 2644..2826 -
1622928812.9998343-CDS-H-paniculata_contig11052:3211..35171622928812.9998343-CDS-H-paniculata_contig11052:3211..3517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 3212..3517 -
1691480629.8047457-CDS-H-paniculata_contig11052:3211..35171691480629.8047457-CDS-H-paniculata_contig11052:3211..3517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 3212..3517 -
1622928813.0165815-CDS-H-paniculata_contig11052:3923..39951622928813.0165815-CDS-H-paniculata_contig11052:3923..3995Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 3924..3995 -
1691480629.8144474-CDS-H-paniculata_contig11052:3923..39951691480629.8144474-CDS-H-paniculata_contig11052:3923..3995Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 3924..3995 -
1622928813.0340466-CDS-H-paniculata_contig11052:4280..44751622928813.0340466-CDS-H-paniculata_contig11052:4280..4475Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 4281..4475 -
1691480629.8241715-CDS-H-paniculata_contig11052:4280..44751691480629.8241715-CDS-H-paniculata_contig11052:4280..4475Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 4281..4475 -
1622928813.060607-CDS-H-paniculata_contig11052:4750..48941622928813.060607-CDS-H-paniculata_contig11052:4750..4894Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 4751..4894 -
1691480629.832292-CDS-H-paniculata_contig11052:4750..48941691480629.832292-CDS-H-paniculata_contig11052:4750..4894Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 4751..4894 -
1622928813.0821457-CDS-H-paniculata_contig11052:5407..54941622928813.0821457-CDS-H-paniculata_contig11052:5407..5494Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 5408..5494 -
1691480629.839819-CDS-H-paniculata_contig11052:5407..54941691480629.839819-CDS-H-paniculata_contig11052:5407..5494Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11052 5408..5494 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11052.685.1prot_H-paniculata_contig11052.685.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11052 2644..5494 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11052.685.1

>prot_H-paniculata_contig11052.685.1 ID=prot_H-paniculata_contig11052.685.1|Name=mRNA_H-paniculata_contig11052.685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=329bp
MPLSPQRKTWYFERLKELLDTHTKIFLVKADNVGSNQLAKIRFALRGTAT
VLMGKNTMMRKIISIYIKDHPGHPFEQLLAKVIGNVGFIFTNGDLGAVRD
VIEEHRVPAPARVGSVAPIDVKVPPGPTGCDPGQTSFFQVLQVPTKITKG
QIEITTEVFLVPQGNKVGSSEAALLQKLNIRPFTYGLTIDCIYDNGSVFD
AAVLDLTDEDMTRKFAGACANVAAVSLELGFPTLASLPHSIVNAFRALVS
VVIEGCDKYTFDECEPIKAYLADPSAFAAASGGGDGGDGGDGAAAAAPAP
VEEEEEEEVDMGGGMSMFGAEEGGGGDY*
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mRNA from alignment at H-paniculata_contig11052:2066..5494-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11052.685.1 ID=mRNA_H-paniculata_contig11052.685.1|Name=mRNA_H-paniculata_contig11052.685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3429bp|location=Sequence derived from alignment at H-paniculata_contig11052:2066..5494- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTCTTTCACCGCAACGCAAGACATGGTACTTTGAGCGCCTGAAAGA GCTTCTCGACACTCACACCAAGATTTTCTTGGTCAAGGTACGTTCATTTT TTTCATAAACAGTCCAGGAGCTTGATGGGGTCATTACTTGCAAAGTCATC TTCAAAAGAGGTGAAGTCAGGACCTGACGAGCTTGAACACAAGGAATGCG AGATTCCAACTAGAGCTGTATGGAGGATGGAAGACATTTGTGACGCCAAG GTGGTACTCTTCATTGGTGCCTCGAGCCTGGTATTACGGTGGCGTGGTAA CCTGACCAAATGTCAGGATCATCATGATCCGCAAACAAGGCTTCGGATTT GAATTCGTGACCTTGCGCAGGAGTGGATATTCTTTTCGAAGACACCATTG TGTGTCCATTTGATATAGGAGAATTTCAAGAATGACACGAGGTGTCATTT GACTGGCTGGGTGGATGAGTTTCATGCTTTTTCAAAGCCCATCGCGCGTG CCCACTATCTGTACTCGAATCACATGAACGTAAGTTCCACTTCAAGTGTG ATCAAAATCGGCTACTAAAATTCTTATTCCGTCCCACTTCTATGTTACAG GCTGACAATGTTGGGTCTAATCAGCTGGCCAAGATCCGTTTTGCGCTCCG TGGCACCGCTACCGTGCTCATGGGTAAGAACACCATGATGCGCAAGATCA TCTCGATCTACATCAAGGATCACCCGGGACATCCATTTGAGCAGGTGCGC AGGTAGTCTGGTCCGATCCTTTAATCAGAGCGTGCATCCACAACTTGATG GGAACACACGTACCCCCTGTGGTTCATTTTTCGAACCACTCACAAACGTA ATACCACTGTATTGAGCTTTCGGCATTTTTGCCCTCATCGCACCTAGAAG CCCCTTCTTGTAAAATCGCAAATATATGGCGTGTGCTCGTGTCCCACCAT CACCCTCACATCTCTGTCGTCGATTGCGTTGTACGTTATCTTTTTTTTTC GCCGACATTAATTTTTCAGCTTTTGGCCAAGGTGATCGGAAACGTGGGTT TCATCTTCACGAACGGTGACCTTGGTGCGGTTCGCGACGTGATCGAGGAG CACCGTGTGCCGGCGCCTGCCCGTGTGGGTTCTGTTGCCCCCATCGATGT TAAGGTACCCCCTGGTCCCACGGGATGCGACCCTGGACAAACTTCTTTCT TCCAAGTGCTCCAGGTACGTCGTGCACACCCTGCCTTTTCGTTGCACAGA TCACAACTTCGAAGGCAAGATCGATGGGTGGGTATTGAAGTGATGATGTT GGTCGGACTATACGACACTAGATTCGCCGGATTTCTTGGCCTGTGTAAAC GCCGGAGCAAATACCGGTGGTCATTATAATAACAGACATATTTGACTTAC CAAATACCTGTTATTGGTGTTAGCAAGTATTCCCAAGATTAAGTGATGAA GCTTCCCGCCCCGTTTTTTGGTGTTTCCATGTCTGTTGATGGTCCACAGG TGCCCACGAAGATTACCAAGGGTCAGATTGAGATCACCACTGAGGTTTTC CTTGTGCCTCAGGGTAACAAGGTGCGTCACTTCGAAGCGATGCCGTGACG ACTGCGTGATGGGAGAATTTGTGCCGCGTTCTAAACCAAAAGTGCCCATG AATTTCACGGGTAGCAAGCCATAACCTCAATTTATCTTAGTGGATACGTC TTGTTGGAGCCGACTAGTCTCATTCCATCTGGGTTTCCTTGTGTTGAAAA TCCTCTCTTGGATCAAACGGGAGAGTAAACAGCGAGGATCCTCCCGTCTG AAATGAAGGACTGCATTTCGCAACAATGAATACGTCACCTGTTTAAACGT GCCTCACTCTCCTTTGTCAATCCTGTTGCTTGAATTATTTCGACTCCGTG CGCTTGAATGGGAGATTATAATACCCTCATTAATCCTCAACAAAATCATC GTGGAACCCTGAATACAAATGCTTTAGGTGGGCAGCTCCGAGGCGGCTTT GCTCCAAAAGCTCAACATCCGTCCGTTCACCTACGGGTTGACAATTGACT GCATCTACGACAATGGTTCTGTGTTCGACGCCGCCGTGCTCGACCTAACG GATGAGGACATGACCAGGAAGTTCGCTGGGGCGTGCGCCAACGTTGCGGC TGTATCGCTCGAGCTGGGCTTCCCTACCCTCGCGTCGCTTCCACACTCTA TTGTCAACGCGTTCCGTGCTCTGGTGTCTGTGGTCATCGAGGGATGCGAC AAGTACACCTTCGACGAGTGCGAGCCCATCAAGGTGCAAAACGGATCATT CGCGTTCTGTCATCTGTCTGTCCGTCTCACGATAGGAGTCTCAACAGGGC ACTTCAATATTTGTTTCTTCCGCGTATGAGGGCCTTAACGATTTCTATTT TTTTCTAATGTCCATGGGTTTTTTTTTTATCTGGTAGTCCACGTCTGGTT TTTCTCTCAATTGCACCGACGTCGTTACAGATGAAGCACGATTGTCGCGA GGGTTTACAAAAATATTTTTTCCCTGTATATCTTATATATGACTGACTTG GAGTACTGTGGGTCATTACTGGTTTCTCATGCAAGGTTAGAAGTGTTTTA TTGACCTAATGATCGTGCGCGGCATTTTTTCACCTTACGTTGTCTCATGT TCTGTTACGCTGGTGCAGGCTTACCTGGCCGATCCTAGCGCCTTCGCGGC CGCCTCTGGCGGTGGGGACGGTGGGGACGGTGGGGATGGCGCCGCCGCGG CGGCACCTGCGCCGGTCGAGGAGGAAGAGGAGGAAGAGGTCGACATGGGC GGGGGCATGAGCATGTTCGGTGCTGAAGAGGGCGGGGGCGGAGACTATTG AGCCGACTCGAGCTCTGATGACTTCGTTCATTCTTGATCGTAGATCGTAC TGTAGTACAGCGCGGGTGAAGTGGGGGTGGCTTAGTTGTTCTACTGAGCC GTGGGTTGTCCGTTGCCTATAAGGATATGATCTGCTGTCGTGCAGTGTTG GGTGCCAAGATCTAAATCTTTGCACAGGGGACATCTTAATAAAAAGCACA GAATGCGTCCATTTTCTTTAGTGTGTTGTTGTGCATGTCTTTCGCGGATT GTGTAATGTGGTGTTGATTCTGGTTCGCGCCAAACACCTTTATCCGGGCC TGTTTCTGGTCGTCGGGCACATCATATCTTGAGCTGGACGACATGTGCCG CTATACTCTATTTTAGCTATAATCTCGCTAAAACTGTCCTGAACACAACT GTCCATCACAAACAACGGTGTTCTTTACGTGGAAACATGGAAAGGGGAGG CCATCGGAAAGCAGTACACCACATTCACCCGCCGAAGAGGGAGAAGTATA CCGAATAGCCACATGTTCCCTCTAGCCATCCGCCATGTAACCTGACCAAC ATTGCTGAAGTATGGTGTAATGAGTGGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig11052:2066..5494-

>mRNA_H-paniculata_contig11052.685.1 ID=mRNA_H-paniculata_contig11052.685.1|Name=mRNA_H-paniculata_contig11052.685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1974bp|location=Sequence derived from alignment at H-paniculata_contig11052:2066..5494- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTCTTTCACCGCAACGCAAGACATGGTACTTTGAGCGCCTGAAAGA
GCTTCTCGACACTCACACCAAGATTTTCTTGGTCAAGATGCCTCTTTCAC
CGCAACGCAAGACATGGTACTTTGAGCGCCTGAAAGAGCTTCTCGACACT
CACACCAAGATTTTCTTGGTCAAGGCTGACAATGTTGGGTCTAATCAGCT
GGCCAAGATCCGTTTTGCGCTCCGTGGCACCGCTACCGTGCTCATGGGTA
AGAACACCATGATGCGCAAGATCATCTCGATCTACATCAAGGATCACCCG
GGACATCCATTTGAGCAGGCTGACAATGTTGGGTCTAATCAGCTGGCCAA
GATCCGTTTTGCGCTCCGTGGCACCGCTACCGTGCTCATGGGTAAGAACA
CCATGATGCGCAAGATCATCTCGATCTACATCAAGGATCACCCGGGACAT
CCATTTGAGCAGCTTTTGGCCAAGGTGATCGGAAACGTGGGTTTCATCTT
CACGAACGGTGACCTTGGTGCGGTTCGCGACGTGATCGAGGAGCACCGTG
TGCCGGCGCCTGCCCGTGTGGGTTCTGTTGCCCCCATCGATGTTAAGGTA
CCCCCTGGTCCCACGGGATGCGACCCTGGACAAACTTCTTTCTTCCAAGT
GCTCCAGCTTTTGGCCAAGGTGATCGGAAACGTGGGTTTCATCTTCACGA
ACGGTGACCTTGGTGCGGTTCGCGACGTGATCGAGGAGCACCGTGTGCCG
GCGCCTGCCCGTGTGGGTTCTGTTGCCCCCATCGATGTTAAGGTACCCCC
TGGTCCCACGGGATGCGACCCTGGACAAACTTCTTTCTTCCAAGTGCTCC
AGGTGCCCACGAAGATTACCAAGGGTCAGATTGAGATCACCACTGAGGTT
TTCCTTGTGCCTCAGGGTAACAAGGTGCCCACGAAGATTACCAAGGGTCA
GATTGAGATCACCACTGAGGTTTTCCTTGTGCCTCAGGGTAACAAGGTGG
GCAGCTCCGAGGCGGCTTTGCTCCAAAAGCTCAACATCCGTCCGTTCACC
TACGGGTTGACAATTGACTGCATCTACGACAATGGTTCTGTGTTCGACGC
CGCCGTGCTCGACCTAACGGATGAGGACATGACCAGGAAGTTCGCTGGGG
CGTGCGCCAACGTTGCGGCTGTATCGCTCGAGCTGGGCTTCCCTACCCTC
GCGTCGCTTCCACACTCTATTGTCAACGCGTTCCGTGCTCTGGTGTCTGT
GGTCATCGAGGGATGCGACAAGTACACCTTCGACGAGTGCGAGCCCATCA
AGGTGGGCAGCTCCGAGGCGGCTTTGCTCCAAAAGCTCAACATCCGTCCG
TTCACCTACGGGTTGACAATTGACTGCATCTACGACAATGGTTCTGTGTT
CGACGCCGCCGTGCTCGACCTAACGGATGAGGACATGACCAGGAAGTTCG
CTGGGGCGTGCGCCAACGTTGCGGCTGTATCGCTCGAGCTGGGCTTCCCT
ACCCTCGCGTCGCTTCCACACTCTATTGTCAACGCGTTCCGTGCTCTGGT
GTCTGTGGTCATCGAGGGATGCGACAAGTACACCTTCGACGAGTGCGAGC
CCATCAAGGCTTACCTGGCCGATCCTAGCGCCTTCGCGGCCGCCTCTGGC
GGTGGGGACGGTGGGGACGGTGGGGATGGCGCCGCCGCGGCGGCACCTGC
GCCGGTCGAGGAGGAAGAGGAGGAAGAGGTCGACATGGGCGGGGGCATGA
GCATGTTCGGTGCTGAAGAGGGCGGGGGCGGAGACTATTGAGCTTACCTG
GCCGATCCTAGCGCCTTCGCGGCCGCCTCTGGCGGTGGGGACGGTGGGGA
CGGTGGGGATGGCGCCGCCGCGGCGGCACCTGCGCCGGTCGAGGAGGAAG
AGGAGGAAGAGGTCGACATGGGCGGGGGCATGAGCATGTTCGGTGCTGAA
GAGGGCGGGGGCGGAGACTATTGA
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